#NEXUS [written Sat Feb 04 17:44:15 SGT 2017 by Mesquite version 3.11 (build 766) at 197-223.priv23.nus.edu.sg/172.23.197.223] BEGIN TAXA; DIMENSIONS NTAX=40; TAXLABELS Calocybella_sp._1620_ITS Calocybella_sp._1624_ITS Calocybella_sp._1625_ITS Calocybella_sp._1622_ITS Calocybella_sp._7752_ITS Calocybella_babruka_KU366466 Calocybella_lohitha_KU366465 'Arthromyces matolae NR_119702' Arthromyces_matolae_EU708339 Asterophora_lycoperdoides_AF357037 Asterophora_parasitica_AF357038 Tephrocybe_gibberosa_AF357041 Tricholomella_constricta_AF357036 Tricholomella_leucocephala_JN790692 Tephrocybe_palustris_AF357044 Tephrocybe_boudieri_AF357046 Tephrocybe_boudieri_AF357047 Tephrocybe_boudieri_DQ825427 Tephrocybe_inolens_AF357045 Blastosporella_zonata_EU708340 Ossicaulis_lachnopus_HE649955 Ossicaulis_lignatilis_HE649951 Gerhardtia_borealis_UNITE Gerhardtia_sp._H04_1840_ITS 'Gerhardtia sp HC01_025_EF421103_UNITE' Gerhardtia_highlandensis_FJ601808 Gerhardtia_highlandensis_GU734744 Gerhardtia_sp._7751_ITS Calocybe_gambosa_AF357027 Calocybe_gambosa_UDB011371 Calocybe_ionides_AF357029 Rugosomyces_ionides_UDB017859 Calocybe_obscurissima_AF357031 Lyophyllum_leucophaeatum_AF357032 Lyophyllum_favrei_AF357034 Lyophyllum_ochraceum_AF357033 Calocybe_carnea_AF357028 Calocybe_fallax_JF907774 Rugosomyces_chrysenteron_UDB015551 Calocybella_swetha_KU366467 ; END; BEGIN CHARACTERS; Title Calocybella_ITS; DIMENSIONS NCHAR=749; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Calocybella_sp._1620_ITS TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGATGCTGGCTC----TCCG-GAGT-A-TGTGCACGCCTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CTTTTTGTAGACTTGAATTAA----------CTCTCGAGG----AAACTCGG--TT-TGAGAAC-----ATGTCGTA-----------------------TGGCTGTTCTTGAG--------TTCTTGTCTATGATACTATA----TACAC-----TCTGAATGTAATAGAATGTAA---TGTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTA--TCAACCACCTTAACTTTTT---GTTCAAGGT-TTGGATTGGAATGTGGGAT----GTGCAGGCTT---TTAT----ATAAAGTCAGCTCTCCTTAAAGATATTAGTGAGGCT-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTT-GAAG-GGTCTTCAAT---------GTTTAAGGTCTTGCT-TCTA-ACAGTCCCTTTGG Calocybella_sp._1624_ITS TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGATGCTGGCTC----TCCG-GAGT-A-TGTGCACGCCTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CTTTTTGTAGACTTGAATTAA----------CTCTCGAGG----AAACTCGG--TT-TGAGAAC-----ATGTCGTA-----------------------TGGCTGTTCTTGAG--------TTCTTGTCTATGATACTATA----TACAC-----TCTGAATGTAATAGAATGTAA---TGTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTA--TCAACCACCTTAACTTTTT---GTTCAAGGT-TTGGATTGGAATGTGGGAT----GTGCAGGCTT---TTAT----ATAAAGTCAGCTCTCCTTAAAGATATTAGTGAGGCT-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTT-GAAG-GGTCTTCAAT---------GTTTAAGGTCTTGCT-TCTA-ACAGTCCCTTTGG Calocybella_sp._1625_ITS TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGATGCTGGCTC----TCCG-GAGT-A-TGTGCACGCCTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CTTTTTGTAGACTTGAATTAA----------CTCTCGAGG----AAACTCGG--TT-TGAGAAC-----ATGTCGTA-----------------------TGGCTGTTCTTGAG--------TTCTTGTCTATGATACTATA----TACAC-----TCTGAATGTAATAGAATGTAA---TGTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTA--TCAACCACCTTAACTTTTT---GTTCAAGGT-TTGGATTGGAATGTGGGAT----GTGCAGGCTT---TTAT----ATAAAGTCAGCTCTCCTTAAAGATATTAGTGAGGCT-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTT-GAAG-GGTCTTCAAT---------GTTTAAGGTCTTGCT-TCTACACAGTCCCTTTGG Calocybella_sp._1622_ITS TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGATGCTGGCTC----TCCG-GAGT-A-TGTGCACGCCTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CTTTTTGTAGACTTGAATTAA----------CTCTCGAGG----AAACTCGG--TT-TGAGAAC-----ATGTCGTA-----------------------TGGCTGTTCTTGAG--------TTCTTGTCTATGATACTATA----TACAC-----TCTGAATGTAATAGAATGTAA---TGTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTACATTA--TCAACCACCTTAACTTTTT---GTTCAAGGT-TTGGATTGGAATGTGGGAT----GTGCAGGCTT---TTAT----ATAAAGTCAGCTCTCCTTAAAGATATTAGTGAGGCT-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTT-GAAG-GGTCTTCAAT---------GTTTAAGGTCTTGCTCTCTACACAGTCCCTTTGG Calocybella_sp._7752_ITS TCCGTAGGTGAACCTGCGGAAGGATCATTACTGAAT---AAAATT---GGTTAGGTTGATGCTGGCTC----TTAG-GAGTAA-TGTGCACGCCTGGCTGA--CATTTTATTT-----ACCCACCTGTGCACCTTTTTGTAGACTTGAACAAA----------TTTTCAAGG----AAACTTGG--TTTTGAGAAC-----GTGTCA------ATATAATG-----------TGACTGTTCTTGGG--------TTCTAGTCTATGAATTTACA----TACACC----TTTGAATGTGATAGAATGTTT---ATGTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTTAATTA--TCAACCTCCTTAACTTTTTT--GTTTGAGGT-CAGGTTTGGATTGTGGGAT----GTGCAGGCTT---TCATTT---ATGAGTCGGCTATCCTTAAAAGTGTTAGTGAGGCT-----TTT-GTT-GACCC---ATCACTGGTGTGATAA-TTATCTACGCCATTTG-AAAG--GTCATCAGTA--------AATTAAAGTCTTGCT-TCTA-ACAGTCTGTTGAC Calocybella_babruka_KU366466 ----------------GCGGAGGATCATTATTGAAT---AAAATT---GGTTGGGTTGTTGCTGGCTC----TTAG-GAGT-A-TGTGCACGCCTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CCTTGTGTAGACTTGAACAAA----------TTCTCGAGG----AAACTCGG--TT-TGAGAAC----AATGTCATAT-ATATTTATAT-----------TGACTGTTCTTGTG--------TTCTAGTCTATGATTTTACA----TACAC-----CATGAATGTAATAGAATGTTAA--TGTTATTGGCC--------TTTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTA--TCAACCTCCTTAACTTTTTTTGGTTCAAGGT-TAAGTTTGGATTGGGGGAT----GTGCGGGCTT---TTTCTCTTGAGAAGTCGGCTATCCTTAAAAAAATTAGTGAGACT-----TTTTGTTGGTCCC---ATCACTGGTGTGATAA-TTATCTACGCCATATTGAAAGGGGTCTTCAATA--------AATTAGGGTCTTGCT-TCTA-ACAGTCCCTTATG Calocybella_lohitha_KU366465 ----------------GCGGAGGATCATTACTGAAT---AATTAT---GGTCGAGTTGTTGCTGGCTC----TTAG-GAGC-A-TGTGCACACTTGCC-GC--CATTTTATTT-----ACCCACCTGTGCA-CCTTTTGTAGACCTTGGATTATG--------TTACTAAGG---AAAACTTGGT-AGATGAGGAC---------------GTGTCTGTAT----------TGGACTGTTCTTGGG-------TCCTTGGTTTATGATTTTTGT----TATAC-A---CACGAATGTAATAGAATGTATT--GTTGGTAGGCC---------TTTGTGCCATTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTA--TCAACCTCCTTAACTTTTTT--GTTAACGGT-TAGGCTTGGATTGTGGGAC----GTGCGGGCTT---TTTAAC--CAAAGGTCGGCTGTCCTTAAATATATTAGTGAGGCT-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCTATTCG-ATCGTCTACAATAAT-----------TTAAAGCTTTGCT-TATA-ACCGTCCTTGTAG 'Arthromyces matolae NR_119702' TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAATACAAACCCT---GGTCTTGGTTGTGCTGGCCC----TTAG-GGGC-A-TGTGCACGCCTTGG----TCATCGTTTCT-----AACCACCTGTGCA-CCTTTTGTAGACCTTGGA------------------------------------AT-TGGGGAG-----TTGCTGTTCGCTGTCTAAGC-----------CGGCTCTCCCTGTTAA--ACCCTCAAGGTCTACGCATTTACA----TACCC-----CAAAAAAGTTATAGAATGTTT---TATTATTGGCC---------TCAGTGCCTTTAA-CC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTGACCAGCTTTTGC--GAGCT-GGC-TAGGCTTGGA-TGTGGGGG----TTGCCGGCCTT--TTCT-----ATAGGTCAGCTCCTCTTAAATGCATTAGCGAAACC-----TT--GTT-GA-CC---GCTGCTGGTGTGATAA-TTATCTACGCTACGGC-AGTC-AGCTATT---------------TGGGTGTTTGCT-TCTA-ACCGTCTGCAAGG Arthromyces_matolae_EU708339 TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAATACAAACCCT---GGTCTTGGTTGTGCTGGCCC----TTAG-GGGC-A-TGTGCACGCCTTGG----TCATCGTTTCT-----AACCACCTGTGCA-CCTTTTGTAGACCTTGGA------------------------------------AT-TGGGGAG-----TTGCTGTTCGCTGTCTAAGC-----------CGGCTCTCCCTGTTAA--ACCCTCAAGGTCTACGCATTTACA----TACCC-----CAAAAAAGTTATAGAATGTTT---TATTATTGGCC---------TCAGTGCCTTTAA-CC-T-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTGACCAGCTTTTGC--GAGCT-GGC-TAGGCTTGGA-TGTGGGGG----TTGCCGGCCTT--TTCC-----ATAGGTCAGCTCCTCTTAAATGCATTAGCGAAACC-----TT--GTT-GA-CC---GCTGCTGGTGTGATAA-TTATCTACGCTACGGC-AGTC-AGCTATT---------------TGGGTGTTTGCT-TCTA-ACCGTCTGCAAGG Asterophora_lycoperdoides_AF357037 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGTTGCTGGCTC----TTAG-GAGC-A-TGTGCACGCCTAGC-AC--CATTTTT---------ACCACCTGTGCA-CTTTTTGTAGACCTGGA-TAC----------CTCTCGAGG----AAACTCGG--TTTTGAGGAT------TGATGTT---GGCGCAAGC----------CCAACTTTCCTTACA--------TTTCCGGCCACGTTTTTACA----TACCCCA---TAAGAATGTAACAGAATGTC----ATTAATTGGCC---------TTTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCTGGCTTTTAC--TAGCT-AGT-CAGGCTTGGA-TGTGGGGG----TTGCGGGCTT---CTC------AGAAGTCGGCTCTCCTTAAATGTATTAGTGAAACC-----TTTGGTT-GA-CA---ATCCTTGGTGTGATAA-TTATCTACGCCTTTGA-AAAT-CATCCTTCATT--------TTATGGGGTTTTGCT-TCTA-ACA---------- Asterophora_parasitica_AF357038 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGTTGCTGGCTC----CTAG-GAGC-A-TGTGCACGCCTACC-AC--CATTTTT---------ACCACCTGTGCA-CTTTTTGTAGACCTGGA-TAC----------CTCTCGAGG----AAACTCGG--TTATGAGGAC------TGCTGT-----GCGCAAGC----------TCGGCTTTCCTTACA-------TTTCCGGTCTACGTTTTCATA----TACCCCA---TAAGAATGTAACAGAATGTC----ATTAATTGGCC---------TTTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTCGCTCTCG-ATCGATGAAGAACGCAGCGAAATGCGATAAGTAAGAGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCTGGCTTTTAC--TAGCT-AGT-CAGGCTTGGA-TGTGGGGG----TTGCGGGCTT---CTT------AGAAGTCGGCTCCTCTTAAATGCATGAGTGAAACC-----TTTGGTT-GA-CC---ATCGCTGGTGTGATAA-TTATCTACGCCTTTGA-GAGT-CTTCCTTCAT----------TATGGGGCTTTGCT-TATA-ACC---------- Tephrocybe_gibberosa_AF357041 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAACTT---GTTTGGGTTGTTGCTGGCTC----TTAG-GAGC-A-TGTGCACGCCTGAC-ACATCTTTAT---------AACCACCTGTGCA-CCTTTTGTAGACCTGAGATAAA---------CTCTCGAGG----CAACTCGG--TT-TGAGGAG-----CTGCTGT-----GCGAAAGC-----------CAGCTCTCCTTGCA------TCTCCAGGTCTATGTTTTTATA----TACCCCA---TAAGAATGTAACAGAATGTC----TTTTATTGGCC---------TTTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTCGTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCTGGTTTTTAT--TAACT-AGT-CAGGCTTGGA-TGTGGGAG----TTGCGGGCTT---CTC------AGAAGTCGGCTCTCCTTAAATGTATTAGCGAAACC-----TTTGGTT-GA-CC---ATCTCTGGTGTGATAA-TTATCTACGCCGCTGA-GAAT-CATCCTTTAT----------TATGAGGTTCTGCT-TCTA-ACC---------- Tricholomella_constricta_AF357036 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGCTGCTGGCCC----CTCG-GGGC-A-TGTGCACGCGCGGC-AAACCATTTTT--------AACCACCTGTGCA-CCCTTTGTAGACCTGGATAAC----------CCCTCGAGG----AAACTCGG--TT-TGAGGAC------CGCCGC-----GCGAAAGC-----------CGGCCCTCCTTGCT-------CTTCCGGTCTATGTTTTCATA----TACCCCA---CAAGAATGTAACAGAATGTC----ATTGAATGGCC---------TTTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCCGGCTTTTGC--TAGCTGTGT-CAGGCTTGGA-CGTGGGGG----CTGCGGGCTT---CTCC-----AGAAGTCGGCTCTCCTTAAATGCATTAGTGAGACC-----TTTGGTT-GA-CC---ATCTCTGGTGTGATAA-TTATCTACGGCGGTGA-GAAT-CAGCCTTCA-------------TGGGGTCCTGCTCTCTA-ACC---------- Tricholomella_leucocephala_JN790692 ------------------------------------------------------------------------------------------------------------------------------------------GTAGACCTGGATAAC----------CCCTCGAGG----AAACTCGG--TT-TGAGGAC------CGCCGC-----GCGAAAGC-----------CGGCCCTCCTTGCT-------CTTCCGGTCTATGTTTTCACA----TACCCCA---CAAGAATGTAACAGAATGTC----ATTGAATGGCC---------TTTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCCGGCTTTTGC--TAGCTGTGT-CAGGCTTGGA-CGTGGGGG----CTGCGGGCTT---CTTTC---GAGAAGTCGGCTCTCCTTAAATGCATTAGTGAGACC-----TCTGGTT-GA-CC---ATCTCTGGTGTGATAA-TTATCTACGCCGCTGA-GAAT-CAGCCTTGAG----------AATCAGCCTT----------------------- Tephrocybe_palustris_AF357044 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGTTGCTGGTTC----TTCG-GAGC-A-TGTGCACACCTAGC-AC--CATTTTT----------ACACCTGTGCA-CCTTTTGTAGATCTGGA-TAC----------CTCTCGAGG----AAACTCGG--TT-TGAGGAC------TGCTGTT----GCGCAAGC----------TCAGCTTTCCTTACA-------TTTCCGGTCTATGTTTTTACA----TACCCCA---TAAGAATGTAATAGAATGTTT---ATTAACTGGCC--------TTTTGTGCCTTTAA-TC-A-AATACAAC------------------------------------------------------------------TGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCTGGCTTTTAT--TAGCTAAGTCCAGGCTTGGA-TGTGGGGG----TTGCGGGCTT---CTC------AGAAGTCGGCTCTCCTTAAATGTATGAGTGAAACC-----TTTGGTT-GA-CA---ATCCTTGGTGTGATAA-TTATCTACGCCTTTGA-AAAT-CATCCTTCATT--------TTATGGGGTTTTGCT-TCTA-ACA---------- Tephrocybe_boudieri_AF357046 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAATTT---GGTTGGGTTGTTGCTGGCTT----TTCG-GAGC-A-TGTGCACGCCTGGC-AC--CATTTTT---------ACCACCTGTGCA-CTTTTTGTAGACCTGAA-CAA----------TTCTCGAGG----CAACTCGG--AT-TGAG??C------TGTTGT-----GCGAAAGC-----------CAGCTTTCCTTGTG--------TTCTAGTCTACGATTTTATA----TACCCCA---CAAGAATGTAACAGAATGTC-----TTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTCTTCAGCTTTTGC--GAGCTTGATCTAGGCTTGGA-TGTGGGTG----TTGCAGGCTT---CTC------AGAAGTCAGCTCTCCTGAAATGTATTAGTGAGACC-----TTT-GTT-GA-CC---GTCTCTGGTGTGATAA-TTATCTACGCCACAGT-AGTG-TCA-TTTAAT-----------ATGGGGTCCTGCT-TATA-ACT---------- Tephrocybe_boudieri_AF357047 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAATTT---GGTTGGGTTGTTGCTGGC?T----TTCG-GAGC-A-TGTGCACGCCTGGC-AC--CATTTTT---------ACCACCTGTGCA-CTTTTTGTAGACCTGAA-CAA----------TTCTCGAGG----CAACTCGG--AT-TGAG??C------TGTTGT-----GCGAAAGC-----------CAGCTTTCCTTGTG--------TTCTAGTCTACGATTTTATA----TACCCCA---CAAGAATGTAACAGAATGTC-----TTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTGA-TTAAATTC-----------TCAGCTTTTGC--GAGCTTGAT-TAGGCTTGGA-TGTGGGTG----TTGCAGGCTT---CTC------AGGGGTCAGCTCTCCTGAAATGTATTAGTGAGACC-----TTT-GTT-GA-CC---GTCTCTGGTGTGATAA-TTGTCTACGCCACAGT-AGTG-TCA-TTTAAT-----------ATGGGGTCCTGCT-TATA-ACT---------- Tephrocybe_boudieri_DQ825427 -----------------------------------------------------GGTTGTTGCTGGCTT----TTCG-GAGC-A-TGTGCACGCCTGGC-AC--CATTTTT---------ACCACCTGTGCA-CTTTTTGTAGACCTGAA-CAA----------TTCTCGAGG----CAACTCGG--AT-TGAGGAC------TGTTGT-----GCGAAAGC-----------CAGCTTTCCTTGTG--------TTCTAGTCTACGATTTTATA----TACCCCA---CAAGAATGTAACAGAATGTC-----TTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTGA-TTAAATTC-----------TCAGCTTTTGC--GAGCTTGAT-TAGGCTTGGA-TGTGGGTG----TTGCAGGCTT---CTC------AGGGGTCAGCTCTCCTGAAATGTATTAGTGAGACC-----TTT-GTT-GA-CC---GTCTCTGGTGTGATAA-TTGTCTACGCCACAGT-AGTG-TCA-TTTAAT-----------ATGGGGTCCTGCT-TATA-ACT---------- Tephrocybe_inolens_AF357045 TCCGTAGGTGAACCT-CGGAAGGATCATTATTGAAT---AAATTT---GGTTGGGTTGTTGCTGGCTT----CTCG-GAGC-A-TGTGCACGCCTGGC-AC--CATCTTT---------ACCACCTGTGCA-CTTTTTGTAGACTTGGA-CAA----------CTCTCGAGG----CAACTCGG--AT-TGAGGAC------TGCTGT-----GCGAAAGC----------CCGGCTTTCCTTGAG--------TTCTGGTCTATGA-TTTATA----TACCCCA---TAAGAATGTAACAGAATGTT-----TTTATTGGCC---------TTTGTGCCTTTAA-TC-T-AATACAACTTTCAACAACGGATCTC-TTGG-TCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTTCAGCTTTTAC--GAGTTTGAT-TAGGCTTGGA-TGTGGGTG----TTGCGGGCTT---CTC------AGAAGTCGGCTCTCCTGAAATGCATTAGTAAGACC-----TTT-GTT-GA-CC---GTCTTTGGTGTGATAA-TTATCTACGCCACAGT-GGGT-TAGCTTTAAT----------GTGCGGGTCTTGCT-TATA-ACC---------- Blastosporella_zonata_EU708340 TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACCC---TGGTTGGGTTGTGCTGGCCT----CTAG-GGGC-A-TGTGCACGCCTGCC-AC--CGTTTTC--------AACCACCTGTGCA-CCTTTTGTAGACCTGGA-TAC----------CTCTCGAGG----AAACTCGG--TT-TGAGGAC------TGCTGTG--CCGTCAAGGC-----------CGGCTCTCCTTGCT--------TTCCGGTCTACGTCTTCACA----TACCCCA---TAAGAATGTAACAGAATGTC----TTTTACTGGCC---------TTAGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTAACCAGTTTTTAC--GAGCTTGGA-TAGGCTTGGA-TGTGGGAG----TTGCGGGCTT---CTC------AGAAGTCGGCTCTCCTTAAATGCATTAGTGAATTC-----TTT-GTT-GA-CC---ATCCTTGGTGTGATAA-TTATCTACGCCATTGACTGAT-CAGCTCTTAT--------------GGGATTCGCT-TCTA-ACCAGTCCTTAGG Ossicaulis_lachnopus_HE649955 TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAACTT---GGTTGGGTTGCTGCTGGCCT----CTCG-GGGC-ACTGTGCACGCCTGGC-AC--CATTTTTAT------AACCACCTGTGCA-CCTTTTGTAG----------------------TCTCTGAA----CGTCTGGG--TC-GAAAGGC----CCTGTCGG----------GAC------------------------------------GGGTCTATGTCTTTACA----TACCCCA---TAAGAATGTAACAGAATGTC----TTTTAATGGCC---------TCTGCGCCACTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTC--TCAACCTTTCCAGCTTTTAC--TAGCTTGGT-CAGGCTTGGA-TCTGGGGG----CTGCGGGCTTTTATTC------TAAAGTCGGCTCTCCTTAAATGCATTAGCGAAACC-----TTTGGTT-GA-CC--AATCCCTGGTGTGATAA-TTATCTACGCCACCGA-TAAA-CCTTACAAGG--------------CCCTTTTGCT-TCTA-ACCGTCCCTTGGG Ossicaulis_lignatilis_HE649951 -----------------------------------T---AAACTT---GGTTGGGTTGCTGCTGGCCT----CTCG-GGGC-ACTGTGCACGCCTGGC-GC--CATTTTTAT------AACCACCTGTGCA-CCTTTTGTAGACCT------------------TTTCCGAA----TGGTGGGC--TG-TGAAAGG----CCTGTCGG-----ACGGTAAA------------------------------------GTGTCTATGTCTTTACA----TACCCCA---TAAGAATGTAACAGAATGTC----TTTTAATGGCC---------TCTGCGCCACTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAACTC--TCAACCTTTCCGGCTTTCAC--TAGCTCGGT-CAGGCTTGGA-CGTGGGGG----CTGCGGGCTTCT-TTT------TGAAGTCGGCTCTCCTTAAATGCATTAGCGAAAAC----CTTTGGTT-GA-CC-AAATCCCTGGTGTGATAA-TTATCTACGCCACAGG-ATAA-CCTTACAAGG--------------ACTTTTCGCT-TGTA-ACCGTCCTTTTGG Gerhardtia_borealis_UNITE TCCGTAGGTGAACCTGCGGAAGGATCATTATTGAAT---AAAATT---GGCTGGGTTGTTGCTGGCTT----TTAG-GAGC-A-TGTGCACACTCGGT-GT--CATTTTATT------AACCACTTGTGCA-CTTTATGTAGACCCCTTGAG-----------TTTTCGAGG----AAACTCGG--AT-TGAGGAA----GGTGCCTT-----CTGATGGA-----------GGGCTCTCCTTGTGCG---CTCTGGGGGTCTATGATTTCACA----CACAC-----TATGAATGTAACAGAATGTTG---ACATATTGGC----------ATTGTGCCTTTAA-TA-C-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATATTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTTAAATCA--TCAATTTTTTTTGAATTGTCATCGATTCAGT-CAAGATTGGATTGTGGGGG---TGTGCGGGCTC---GTAT-----CAGAGTCGGCTCTCCTTAAAAATGTTAGTGAGGCC-----TTT-GTC-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTG-AAGGTCTTCATTGT---------------TGGACTTGCT-TCTA-ACTGGTCTGGTTA Gerhardtia_sp._H04_1840_ITS --------------------------------------------T---GGCTGGGTTGTTGCTGGCTT----TTAG-GAGC-A-TGTGCACACTCGGT-GT--CATTTTATT------AACCACTTGTGCA-CTTTATGTAGACCCCTTGAG-----------TTTTCGAGG----AAACTCGG--AT-TGAGGAA----GGTGCCTT-----CTGATGGA-----------GGGCTCTCCTTGTGCG---CTCTGGGGGTCTATGATTTCACA----CACAC-----TATGAATGTAACAGAATGTTG---ACATATTGGC----------ATTGTGCCTTTAA-TA-C-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATATTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCATTTAAATCA--TCAATTTTTTTTGAATTGTCATCGATTCAGT-CAAGATTGGATTGTGGGGG---TGTGCGGGCTC---GTAT-----CAGAGTCGGCTCTCCTTAAAAATGTTAGTGAGGCC-----TTT-GTC-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTG-AAGGTCTTCATTGT---------------TGGACTTGCT-TCTA-ACTGGTCTGGTTA 'Gerhardtia sp HC01_025_EF421103_UNITE' ---------------------GGATCATTATTGAAT---AAAATT---GGCTGGGTTGTTGCTGGCTT----TTAG-GAGC-A-TGTGCACACTCGGT-GT--CATTTTATT------AACCACTTGTGCA-CTTTATGTAGACCCCTTGAG-----------TTTTCGAGG----AAACTCGG--AT-TGAGGAAAGAAGGTGCCTT-----CTGATGGA-----------GGGCTCTCCTTGTGCG---CTCTGGGGGTCTATGATTTCACA----CACAC-------TGAATGTAACAGAATGTTG---ACATATTGGC----------ATTGTGCCTTTAA-TA-C-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATATTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCA-TTAAATAC--TCAATCTTTTTTGAATTGTCATCGATTCAGT-CAAGATTGGATTGTGGGGG---TGTGCGGGCTC---GTAT-----CAGAGTCGGCTCTCCTTAAAAATGTTAGTGAGGCC-----TTT-GTC-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCACTTG-AAGGTCTTCATTGT---------------TGGACTTGCT-TCTA-ACT---------- Gerhardtia_highlandensis_FJ601808 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCAATTAAATCA--TCAATCTTACTGATGTTGTC--------AGT-GATGATTGGATTGTGGGGG---TTTGCGGGCTT---GTAA-----CAGAGTCGGCTCTCCTTAAAAATGTTAGTGAGGCC-----TTT-GTY-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCATTGA-ATGGACTTCATTTGT--------------TGGACTCGCT-CATA-ACTGTCTGGTTCA Gerhardtia_highlandensis_GU734744 ------------------------------CGATAT---AAAACT---ACCTGAGTTGTTGCAGGCTC----TTAG-GGGC-A-TGTGCACGCTCAGT-GT--CATTTTATT------AACCA-CTGTGCA-CTTTATGTAGGCCTGTTGGG-----------CTATCGAGG----CAACTCGG--AT-TGAGGAC-----GTGCCATT------------A--------TTAGGCTGTCCTTGTG-----CTCTCTAGGTCTATGATTTCATA----TACTC-----TACGAATGTAACAGAATGTTG---ATATATTGGCC---------TTTGTGCCTTTAA-TACA-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCAATTAAATCA--TCAATCTTACTGATGTTGTC--------AGT-GATGATTGGATTGTGGGGG---TTTGCGGGCTT---GTAA-----CAGAGTCGGCTCTCCTTAAAAATGTTAGTGAGGCC-----TTT-GTT-GA-CC---GTCACTGGTGTGATAA-TTATCTACGCCATTGA-ATGGACTTCATCTGT--------------TGGACTCGCT-CATA-ACTGTCTGGTTCA Gerhardtia_sp._7751_ITS ------------------------------------------------------GTTGTTGCTGGCTC----TTAG-GAGTAA-TGTGCACGCCTGAC-GC--CATTTTTAT------TACCACCTGGKCA-CTATTTGTAGACCCTGAACACAAGGTCTATGTTTTTATTA--CCATACTC?T--AG-TAAGTAA-----------------TCGAATGT-----------TAATTATGGCCTTTTG---TGCCTTTAATTTATAATCATATC?C------------ATTGAATGTAAT?GAATGTT----AATTATGGCCT---------TTTGTGCCTTTAA-TTTATAATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTTT-GGTATTCCGAAGAGCATGCCTGTTTGAGTGTCA-GTAAATTTA-TCAACCTTACTAA---------TAATAATGT-AAGGCTTGGATTCTGGGGGTTATTTGCGGGCTT---GTTA-----TCAAGTCGGCTCCCCTTAAAAGTATTAGTGAGGCC-----TAT-GTT-AA-CC---ATCACTGGTGTGATAA-TTATCTACGCCATTGA-AGGT-TTTCAATATT----------TATAAGGGCTTGCT-TCTA-ACCGTCTA----- Calocybe_gambosa_AF357027 TCCGTAGGTGAACCT-CGGAAGGATCATTACAGAAT---AAACTA---TGCTTGACTGTTGCTGGCTC----TTAT-GAGCATTTGTGCACGTCTAGC-AA--GTCTTT---------ATCCACCTGTGAA-CTTTTTGTAGATATGAAAACATC--------ACTTCGAAA---TAAATTCGG--TTTGGAGGAT-----TTGCAATG--GTGTGTGTACCCATACATAACTTGCTATCCTTGGAT----GCCTTTCGATCTATGTATCTTTATT-ATACCCTTA--AAAAAAAGTAATAGAATGTAT---ACTTATTGGTC-------ACATTGACCATTAAA-AC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGTATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAGC--CTTTACTTTTGT---------AA-AAGGTTTGGACTATGGGGGT--TTTGCAGGTTT---TGTGTT---AAAAATCTGCTCCTCTTAAAAGCATTAGCGGAAAC-----CATTGTG-GA-AA-AGTTTCCTGGTGTGATAA-TTATCTACGCCACACT-TTCT-TCACTTGAA---------------AGGTTTTGCT-TCTA-ACT---------- Calocybe_gambosa_UDB011371 ---GTAG--TGACCT-GCGGAGGATCATTACAGAAT---AAACTA---TGCTTGACTGTTGCTGGCTC----TTAT-GAGCATTTGTGCACGTCTAGC-AA--GTCTTT---------ATCCACCTGTGAA-CTTTTTGTAGATATGAAAACATC--------ACTTCGAAA---TAAATTCGG--TTTGGAGGAT-----TTGCAATG--GTGTGTGTACCCATACATAACTTGCTATCCTTGGAT----GCCTTTCGATCTATGTATCTTTATT-ATACCCTTA--AAAAAAAGTAATAGAATGTAT---ACTTATTGGTC-------ACATTGACCATTAAA-ACAA-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGTATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAGC--CTTTACTTTTGT--------A---AAGGTTTGGACTATGGGGGT--TTTGCAGGTTT---TGTGTT---AAAAATCTGCTCCTCTTAAAAGCATTAGCGGAAAC-----CATTGTG-GA-AA-AGTTTCCTGGTGTGATAA-TTATCTACGCCACACT-TTCT-TCACTTGAA---------------AGGTTTTGCT-TCTA-ACTGTTGTGTCGG Calocybe_ionides_AF357029 TCCGTAGGTGAACCT-CGGAAGGATCATTATAGAAT---AAACAA--CTGCTTGACTGTTGCTGGCTC----TTTTCGAGCATTTGTGCACGTCTCGC-AA--GTCTTTCTTG----ATCCCACCTGTGAA-CCATTTGTAGACTTGGAAACATT--------ACCTCGAGA----CAACTCGG--TT-GGAGGAT-----TTGCAATA--GCCTGTTCGC----------TTTGCTATCCTTGAAT----GTCTTTCAATCTACGTA-TTTTATT-ATACCCCT---TAAACAAGTAACAGAATGTAT---ACTTATTGGCC---------TTTGTGCCTTTAA-TACA-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAACC--CTTTACTTTTGC--------AAA-GGTGTTTGGACTATGGGGGC--TTTGCAGGCTT---CTTA-----ACAAGTCTGCTCCCCTTAAAAGTATTAGCGGAAAC-----CATTGTG-AA-AA-AGTTTCCTGGTGTGATAA-TTATCTACGCCACACT-TTGT-TCACTTAAA---------------AGGCTTTGCT-TCTA-ACC---------- Rugosomyces_ionides_UDB017859 ------GGTGAACCT-GCGGAGGATCATTATAGAAT---AAAACA--CTGCTTGACTGTTGCTGGCTC----TTTTCGAGCATTTGTGCACGTCTCGC-AA--GTCTTTCTTG----TACCCACCTGTGAA-CCATTTGTAGACTTGGAAACATT--------ACCTCGAGA----AAACTCGG--TT-GGAGGAT-----TTGCAATA--GCCTGTTCGC----------TTTGCTATCCTTGAAT----GTCTTTCAATCTACGTATTTTTATT-ATACCCCT---TAAACAAGTAACAGAATGTAT---ACTTATTGGCC---------TTTGTGCCTTTAA-TACA-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAACC--CTTTACTTTTGC--------AAA-GGTGTTTGGACTATGGGGGC--TTTGCAGGCTT---CTTA-----ACAAGTCTGCTCCCCTTAAAAGTATTAGCGGAAAC-----CATTGTGAAA-AA-AGTTTCTTGGTGTGATAA-TTATCTACGCCACACT-TTGT-TCACTTAAA---------------AGGCTTTGCT-TCTA-ACCGTTGTTTCAA Calocybe_obscurissima_AF357031 CCCGTAGGTGAACCT-CGGAAGGATCATTATAGAAT---AAACAC---TGCTTGACTGTTGCTGGCTC----TTAACGAGCAATTGTGCACGTCTAGC-AA--GTCTT----------ATCCACCTGTGAA-CCTTTTGTAGATATGAAAACATC--------ACTTCGAGA----TATTTCGG--TT-TGAATGC----------------------------------------------------------TTTCAATCTATGTATTTTTACT-ATACCCTTAC-AAACAAAGTAATAGAATGTAT---ACTTATTGGCC---------TTTGCGCCTTTAA-ACAC-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCTGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAACTTTTTTACTTTTGT--------GTA-AAGGTTTGGACTATGGGGGT--TTTGCAGGTTT---GTTA-----ACTAGTCTGCTCCTCTTAAAATTATTAGCGGAAAG-----CATTGTG-AA-AA-AGTTTCCTGGTGTGATAA-TTATCTACGCCACACT-TTGC-TCACTTGAA-----------------AATTCGCT-TCTA-ACT---------- Lyophyllum_leucophaeatum_AF357032 TCCGTAGGTGAACCT-CGGAAGGATCATTATAGAAT---AAACAT--TGCTTAGGTTGCTGCTGGCTT----CTAG-GAGC-A-TGTGCACGCCTGAC-GC--CGTTTTCT-------TACCACCTGTGCA-CCTTTTGTAGACCTATGAGATGTATAT---------------------------TTAAAGGGAC------TGTTGA-----GCGAAAGT-----------TCACTATTCCTTTGCATATTATTTCTAGTCTACGTCTTTATCAT-ATACCCTT---TAAAACAGTAACAGAATGTAT---ATTAATTGGCC---------CTTGTGCCTTTAA-ACAA-AATACAACTTTCAACAACGAGTCTC-TTGGCTCTCGCATCGATGAAGAA-GCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAA-TCAACC-TTACAGTTTTGTTA-----CTGTT-AAGACTTGGATTGTGGAGG---TTTGCGGGCTT---TCTA-----AGAAGTCGGCTCCTCTTAAAAGCATGAGTGAAACC-----TTT-GTT-AA-CA---ATCTCTAGTGTGATAA-TTATCTACGCTATTGA-TATT---------------------AATAAGGATTTGCTTTCTA-ACT---------- Lyophyllum_favrei_AF357034 TCCGTAGGTGAACCT-CGGAAGGATCATTATAGAAT---TAACAA-CTGCTTGGGTTGTTGCTGGCTC----TAAG-GAGC-A-TGTGCACGCCTGGC----ACGTTATTCT------TACCACCTGTGCAGTTTTTTGTAGACTGAAA-TGCGTTA------TTATCGAGG--ACACACTCGGTTTT-GGAGGTC------TGCGAT-----GTGAAAGC-----------TCGCTTTCCTTGGATG---CGTTTTAGCTCTATGTAGTTTTAATATTACACCCT--TTAATAAGTAACAGAATGTGTG--AGTCATTGGCC--------ATCTGTGCCTTTAA-TC-A-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAATCATTATCTTTTAGG--------TAA-AAGATTTGGATTGTGGGGGT--TTTGCTGGCTT---TAAT-----AGAAGTCAGCTCCTCTTAAAAGCATGAGTGAAACG-----CTTTGTA-GA-CC---AACTCTGGTGTGATAA-TTATCTACGCCATGGT-TAAC-TTACTTGCAT--------------ATGTTTTGCTTTCTA-ACC---------- Lyophyllum_ochraceum_AF357033 ------GGTGAACCT-CGGAAGGATCATTATAGAAT---TAACAA-CTGCTTGGGTTGTTGCTGGCTC----TACG-GAGC-A-TGTGCACGCCTGGC-GC--CGTTATTCTT-----GACCACCTGTGCACCCTTTTGTAGACTAAAAATGCGTTG------TTATCGAGG--ATACACTCGG--TT-AGAGGTC------TGCGAT-----GTGAAAGC-----------TCGCTTTCCTTGAATG---CGTTTTAGTTCTATGTATTTTAA-TATCACACCCT--TTAAGAAGTAACAGAATGTGTA--TTTAATTGGCC--------TTTTGTGCCTTTAA-TT-A-TATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATGCATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAATCTTTATCTTTTTTAACTAAAGGTCT-AAGATTTGGATTGTGGGGG---TTTGCTGGCTT---TAAT-----AGAAGTCAGCTCCTCTTAAAAGCATGAGTGAAACG-----CTTTGTA-GA-CC---AACTCTGGTGTGATAA-TTATCTACGCCAATGT-TAAC-TTACTTGCAT-------------AATGTTTTGCTTTCTA-ACT---------- Calocybe_carnea_AF357028 --------------------AGGATCATTATAGAAT---AAACCCAAAGCTCAGACTGTTGCTGGCTC----TTAG-GAGTAACTGTGCACGTCTAGC-GT--GTTTTTCTTT----AACCCACCTGTGAA-CCTTTTGTAGATTTGAAAAACATCACC----TTGTCGATA----ACATTCGG--TT-AGAAGAT------TGCAAT-----GCGCAAGT-----------TTGCTCTCTTTGAAT----GTTTTTCAATCTATGTATTTATT---ATAAACTCT--AAAAACAAACATAGAATGTAT---AACTATTGGCC--------TTTAGTGCCTTTAA-TCTAAAATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGGTATTCCGAGGAGCATGCCTG-TTGAGTGTCA-TTAAATTAAATCAAACCTTTGTGGTTTTATA-TAACA-----AAAGTTTGGAATGTGGAGGT--TTTGTAGGCTT---TCT------TAAAGTCTGCTCCTCTTAAAAGCATTAGCGAAAAT-----CTTTGTG-AG-CAAATTTTCCTGGTGTGATAA-TTATCTACGCCATGGC-TTGA-TCACATTAAAGAAC----------TTTTTTTGCT-TCTA-ATC---------- Calocybe_fallax_JF907774 TCCGTAGGTGAACCTGCGGAAGGATCATTACAGAAT---AAAC-----AACTAGGCTGTTGCTGGCTC----CTCG-GAGC-ACTGTGCACGCTTGGT-AA-ATGTTTTTCTT-----GACCACCTGTGCA-CCTTTTGTAGACTCTGAAAACAGCTG-----TTATCGAGG----CAACTCGGTGTT-TGAGGAC------TGCGAC-----GCGAAAGC-----------TCGCTTTCCTTTAGAT---GTTTTCTGGTCTATGTATTCTTTATTATACACATACCCTTAACAGTAACAGAATATATA-----TATTGGCC---------TTTGTGCCTCTAA-CTAA-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATAAAATCAAACCTTTCATCTGTTTA--GATGA-----ATGTTTTGGATTGTGGAGGC--TTTGCAGGCTT---TTT------AAAAGTCGGCTCCTCTTAAAAACATTAGCAGAAGT-----CCT--TT-GG-TT---AATTCTGGTGTGATAA-TTATCTACGCCACGAT-TAAT-CATTCTAAG---------------AGGCTTTGCT-TCTA-ACCGTCCTTTCAA Rugosomyces_chrysenteron_UDB015551 ------GGTGGACCTGCGGAAGGATCATTATAGAGT---AAACAA--TGCTTGGGTTGTTGCTGGCTC----TTAG-GAGCAA-TGTGCACGCCCCGC-AC--GGTTTTTCT------TACCACCTGTGCA-CCTTTTGTAGATTAAGATTAACATTAT---------------------------ATATGAGGAA-----TTGCGTT-----GCGACATC----------TTTGCTTTCCTTGAATG---TTTTTCTTGTCTATGTATTCATTTATTCACAC-----TATAAAAGTAACAGAATGTATATAACTTATTGGCC--------TTTTGTGCCTTTAAAAT-C-AATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTAAATTAAATCAAATCTCTATTCTGTCAA--AAGTTTA---GAGGTATGGATTGTGGGGGTTTTGTGCTGGCTT---TCT------GCAAGTCAGCTCCCCTTAAAAGCATTAGCAGAAAC-----CCGTTGC-TG-GC---AATTCTGGTGTGATAA-TTATCTACGCCATTGT-TAAT-----------------------CACGGTTTTGCT-TCCA-ATAGTCCTGTTTA Calocybella_swetha_KU366467 TCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAAT---AAAATTGGGGTCTTGGTTGATGCTGACTTCTTTTTTG-AGGT-A-GGGCCACGCTTGCCCAC--CATTTTTATTTTAACCCCCACTGGTCCA-CTTTTGTTAGACTTGGATTGGAA--------TTTTTGGGGCGGTTAATTGGGT-TT-TGGGGAA------CGTGCC-----AATGGGGG-----------TGGCTGTTTTGGTAT----TTATTCAATTTTAGGATTTTACTTT-TTCCCC-----CTTAAAGTTATTGGAATGTGTT--ATTTATTATTGCCCTTTTTTTTTGTGCCTTTAA-TCTT-TATACAACTTTCAACAACGGATCTC-TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA-TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTT-GGTATTCCGAGGAGCATGCCTGTTTGAGTGTCA-TTTAATTAC-TCAACCTTTCTTCAGTTTTTA-----GAAGT-TAGGTTTGGATTGTGGGAA----TTGCAGGCTT---TTT------TGTAGTCAGCTTTCCTTAAAAATGTTAGTAAAGCCAGGCCCTTTGTTTGA-CT-CATTACTTGGTGTGATAAGTTATCTACGCCATGAA-AGTC-TTTCAATGTGGTTGTTCTCTTTTAGAGCTTTGCT-TCTA-ACTGTCCATTTAG ; END; begin mrbayes; outgroup 21; lset nst = 6 rates = gamma; mcmcp ngen = 10000000 samplefreq = 1000 nchains = 4 savebrlens = yes; mcmc; sump burnin = 2500; sumt burnin = 2500; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 749; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 749; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 749; END; BEGIN TREES; Title Calocybella_ITS; ID 0159168a90561; LINK Taxa = Taxa; TRANSLATE [0] 1 Calocybella_sp._1620_ITS, [1] 2 Calocybella_sp._1624_ITS, [2] 3 Calocybella_sp._1625_ITS, [3] 4 Calocybella_sp._1622_ITS, [4] 5 Calocybella_sp._7752_ITS, [5] 6 Calocybella_babruka_KU366466, [6] 7 Calocybella_lohitha_KU366465, [7] 8 'Arthromyces matolae NR_119702', [8] 9 Arthromyces_matolae_EU708339, [9] 10 Asterophora_lycoperdoides_AF357037, [10] 11 Asterophora_parasitica_AF357038, [11] 12 Tephrocybe_gibberosa_AF357041, [12] 13 Tricholomella_constricta_AF357036, [13] 14 Tricholomella_leucocephala_JN790692, [14] 15 Tephrocybe_palustris_AF357044, [15] 16 Tephrocybe_boudieri_AF357046, [16] 17 Tephrocybe_boudieri_AF357047, [17] 18 Tephrocybe_boudieri_DQ825427, [18] 19 Tephrocybe_inolens_AF357045, [19] 20 Blastosporella_zonata_EU708340, [20] 21 Ossicaulis_lachnopus_HE649955, [21] 22 Ossicaulis_lignatilis_HE649951, [22] 23 Gerhardtia_borealis_UNITE, [23] 24 Gerhardtia_sp._H04_1840_ITS, [24] 25 'Gerhardtia sp HC01_025_EF421103_UNITE', [25] 26 Gerhardtia_highlandensis_FJ601808, [26] 27 Gerhardtia_highlandensis_GU734744, [27] 28 Gerhardtia_sp._7751_ITS, [28] 29 Calocybe_gambosa_AF357027, [29] 30 Calocybe_gambosa_UDB011371, [30] 31 Calocybe_ionides_AF357029, [31] 32 Rugosomyces_ionides_UDB017859, [32] 33 Calocybe_obscurissima_AF357031, [33] 34 Lyophyllum_leucophaeatum_AF357032, [34] 35 Lyophyllum_favrei_AF357034, [35] 36 Lyophyllum_ochraceum_AF357033, [36] 37 Calocybe_carnea_AF357028, [37] 38 Calocybe_fallax_JF907774, [38] 39 Rugosomyces_chrysenteron_UDB015551, [39] 40 Calocybella_swetha_KU366467; TREE con_50_majrule = ((21:0.01903643,22:0.06399301):0.049917415,((13:0.01452478,14:0.01734241):0.04091258,((20:0.05645814,(8:0.00203356,9:0.001981025):0.172166):0.03836746,(12:0.0496196,(11:0.03034338,(10:0.02014248,15:0.02201149):0.01557826):0.02133422,((19:0.02729228,(16:0.001369059,(17:0.001334059,18:0.001359401):0.008912182):0.03881134):0.05341434,((34:0.1433132,((35:0.0371308,36:0.0330393):0.105059,((38:0.1270567,39:0.1415652):0.03252736,(37:0.1301123,((31:0.004200382,32:0.01362637):0.05295502,(33:0.06562726,(29:0.001204358,30:0.009834515):0.0548907):0.02433126):0.09333358):0.09537468):0.0276749):0.05092232):0.07287206,((28:0.2428225,((26:0.003489971,27:0.005824671):0.08031931,(25:0.005062833,(23:0.001192331,24:0.001196611):0.003205469):0.0843544):0.1171917):0.02782786,(6:0.03939838,7:0.1797377,(5:0.0612413,40:0.3517648):0.02729752,(1:0.001242428,2:0.00127128,3:0.001231723,4:0.003013097):0.06159293):0.07481485):0.05495418):0.03552551):0.01591569):0.01227065):0.01391803):0.049917415); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1486201455548; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3326193599712597336; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4940080233765046412; mqVersion 311; checksumv 0 3 3502316659 null getNumChars 749 numChars 749 getNumTaxa 40 numTaxa 40 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 600901.0 sumSquares -9.2233720368542556E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 849 609; setLocation 300 80; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3326193599712597336 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0159168a90561; toggleUseWeights off; endTell; setAssignedID 4912.1486200913450.8285510273286585813; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 749 537; setLocation 300 80; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4940080233765046412 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 749 537; setLocation 300 80; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;