#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=22; TAXLABELS Arabidopsis_thaliana_AT1G06020 Arabidopsis_thaliana_AT1G06030 Arabidopsis_thaliana_AT1G17160 Arabidopsis_thaliana_AT1G19600 Arabidopsis_thaliana_AT1G22940 Arabidopsis_thaliana_AT1G49350 Arabidopsis_thaliana_AT1G66430 Arabidopsis_thaliana_AT2G31390 Arabidopsis_thaliana_AT3G09820 Arabidopsis_thaliana_AT3G54090 Arabidopsis_thaliana_AT3G59480 Arabidopsis_thaliana_AT4G10260 Arabidopsis_thaliana_AT4G27600 Arabidopsis_thaliana_AT4G28706 Arabidopsis_thaliana_AT5G03300 Arabidopsis_thaliana_AT5G19150 Arabidopsis_thaliana_AT5G37850 Arabidopsis_thaliana_AT5G43910 Arabidopsis_thaliana_AT5G51830 Arabidopsis_thaliana_AT5G58730 Arabidopsis_thaliana_AT1G06730 Arabidopsis_thaliana_AT1G69200 ; END; BEGIN CHARACTERS; TITLE Arabidopsis_PFKB_matrix; DIMENSIONS NCHAR=333; FORMAT DATATYPE = Protein GAP = - MISSING = X; MATRIX Arabidopsis_thaliana_AT1G06020 STGEKGLIVSFGEMLIDFVPTVSGVSLS----ESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLR-SDGEREFMFYRNPSADMLLRP---DELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVD-A-----VDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALPTDIEALSFL Arabidopsis_thaliana_AT1G06030 NGDNKGLVVSFGEMLIDFVPTESGVSLS----ESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFVTLR-SDGEREFMFYRNPSADMLLRP---DELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQIMSIWDKADIIKVSDVELEFLTGNKTIDDETAMLWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVD-A-----VDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPTDCEALSFL Arabidopsis_thaliana_AT1G17160 -----------GSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGAKLMYPTYFVGRLGEDAHGKLIAEALGDDGVHLDYVRSVNNEPTGHAVVMLQ-SDGQNSIIIVGGA--NMKAWPEIMSDDDLEIVRNAGI-----VLLQREIPDSINIQVAKAVKKAG----------VPVILDVGGMDTPINELLDSIDILSPNETELSRLTGMPETFEQISQCHKLGVKQVLVKLGSKGSALFIQ---GEKPIQQSI-IPAAQVVDTTGAGDTFTAAFAVAMVEGKS-------HEECLRFAAAAASLCVQVKGAIPSMPDRKSVLKLL Arabidopsis_thaliana_AT1G19600 KCPEAPLVLGLAALIDNVAPVDWSLSIADAHISVAPLKKMAGGSVTNVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGSTAQCVC-LVD-DSGNRTMRPCLSS--AVKIQA---DELSKEDFTGSKVLRYAVLNLQ------VIQAAIRFAKQEGLSVSLDLAS-FEMVRNSKSELRQLES--GNIDLCFANEDEAAELLRGEEAGPEAALFLGRHCRWAVVTLGSKGCIAKHDKEVVHISAIGET-V----ATDATGAGDLFASGFLYGLIKGLS-------LEECCKVGSCSGGSVIRALGGE-VTPENHKQLQLK Arabidopsis_thaliana_AT1G22940 AGIQADLKVCAGVYCASVITAVTAQVQSKSVLSDFEFDVVKTGMLPSVEVLLQNLSDFPVMVSTSGHVLAGSSILSIFRERLLPIADIITPNVKEASALLDGFRETVAEMRSAAKSLHGPRFVLVK---GGDLPDSSDSVDVYFDGKEFHELRSPRIATRNTHGTGCTLASCIAAELAKGSSMLSAVKVAKRFVDNALDYSKIGSGMQGPFDHFFGLKSIFNPDDLKWNRSIVDALKAAIEGGATIITREFHGVSLLINDR-IDIALACDADGVGQSLLGPDKIIGVSCKTPEQAHQAWKDGADYIGSGGVFPTNTKANLDGLKEVCEASKLP Arabidopsis_thaliana_AT1G49350 ---MEPVI--IGALILDVHAKPSTTPIS-GTTVPGQVLFAPGGVARNVADCIFKLGITPFMIGTLGLDGPANVL---LKEWKLSMKGILRREDISTPIVS-LVD-TNGEVAAGVAGVDAVENFLTP--------EWIQRFEISSARLLMVDANLSSLALEASCKLAAESS----------VPVWFEPSVTKSQRASIAKYVTIVSPNQDELIAMANALFRSDENKLLLKNGVKVVIVTLGSNGALLCSKGNSGEFKAMHFP-TIPAKVKKLTGAGDCLVGGTVASLSDGLD-------LIQSLAVGIASAKAAVESDDNVPPEFKLDLI---- Arabidopsis_thaliana_AT1G66430 STQESPYVVCFGEMLIDFVPTTSGLSLA----DAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGEDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLT-NEGEREFMFYRNPSADMLLEE---SELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSADNAREEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVLFHPKLKLLLVTEGPEGCRYYTKDFSGRVHGLKVD-V-----VDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGALTVKVRGAIPALPTKEAVHEAL Arabidopsis_thaliana_AT2G31390 SNGDKGLIVSFGEMLIDFVPTESGVSLA----EAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAFVTLR-ADGDREFMFYRNPSADMLLRP---DELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQIMSIWDKAEIIKVSDVELEFLTGSNKIDDETALLWHPNLKLLLVTLGEKGCRYYTKTFKGAVDPFHVN-A-----VDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPALPSDAEVRSFL Arabidopsis_thaliana_AT3G09820 SSDFDGILLGMGNPLLDVSAVVDQQNAIDEMSQKFNVEYIAGGATQNVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVCVLG---GE-RSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAAANNK----VFTMNLSAPFIC---EFFKDVEKCLPYMDYIFGNETEARTFSRVHETDDVEQIASGTYKRTTVITQGADPVVVAED---GKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKG-------IEECVRAGCYASNVVIQRSGCT--YPEKPDFN--- Arabidopsis_thaliana_AT3G54090 PYDDPPLVCCFGAVQKEFVPVVRVHDNPMLQWDPPEFGRAPGGPPSNVAISHVRLGGRAAFMGKVGEDDFGDELVLMMNQERVQTRAVKFDENSKTACTRVKIK-KDGKMMAETVKEPPEDSLF-A---SELNLAVLKEARIFHFNSEVLTSPTMQSTLFTAIQWSKKFGGLIFFDLNLPLPLWRSRNETRKLIKKAWNEANIIEVSQQELEFLLDEDEDFDQTKNLWHDKLKLLVVTDGTLRLHYYTPTFDGVVIGTEDV-LITPFTCDRTGSGDAVVAGIMRKLTTCPEMFEDQDVMERQLRFAVAAGIIAQWTIGAVRGFPTESATQNLK Arabidopsis_thaliana_AT3G59480 SNGEKSLIVSFGEMLIDFVPTVSGVSLA----DAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGDDEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLR-SDGEREFMFYRNPSADMLLRP---DELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQKQILSIWDKAEVIKVSDEELMFLTGSDKVDDETALLWHSNLKLLLVTLGEKGCRYYTKSFRGSVDPFHVD-A-----VDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPALPTESEVQSLL Arabidopsis_thaliana_AT4G10260 -MANTPLIVSFGEMLIDFVPDTSGVSLA----ESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLK-KDGEREFMFYRNPSADMLLKE---SELNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRGDAEKDDVVLLMHDKLKLLIVTDGEKGCRYYTKKFKGRVPGYAVK-A-----VDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPALPTPADAQKLM Arabidopsis_thaliana_AT4G27600 ASPERWDVLGLGQAMVDFSGVVDDETRKLQAMDGCSYKAAAGGSLSNTLVALARLGSQSAMAGSIGGDPLGSFYGTKLRRANVNFLSAPIKDGTTGTVI--VLT-PDAQRTMLAYQGT--SSVVNY---DSCLASLIAKTNVFVVEGYLFELPDTIRTITKACEEAHRNGALVAVTA----SDVSCIERHYDDFDIVGNYADIVFANSDEARAFCHFSEESPISATYMSHFVPFVSVTDGINGSYIGVKGEAIYIPPSPCV-P-----VDTCGAGDAYASGILYGILRGVS------DLKGMGDMAATIAATVVGQQGTRLRVQDAVELA--- Arabidopsis_thaliana_AT4G28706 PPPDNAIVLGCGGIAVDFLATVDSYPQADDKIRSTSLKVQGGGNAANALTCAARLGLNSRLISKVANDSQGKGMLEELEADGVDTSFIVVSKEGNSPFTYILV--DNQTKTRTCIHTPGDPPMLPTDLSQSSMLSALDRASIVYFDVRLHE---------TALVIAKEAS-------RKKIPILVDTEKKRDGLDDLLPFADYVVCPENFPQTWTEVSTPGALVSMLRLPKLKFVIVTSGEHGCLMVVGTMTGRFLGTAEK-IPPEELVDTTGAGDAFIGAVLYAICAGMP-------PEKMLPFAAQVAGCSCRALGARTGLPHRPRLVPFL Arabidopsis_thaliana_AT5G03300 SSNYDGILLGMGNPLLDISAVVDDENAIDEMSSKFNVEYIAGGATQNVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVCVVG---GE-RSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAAANNK----VFTMNLSAPFIC---EFFKDVEKFLPYMDFVFGNETEARTFSRVHETEDVEQIATGTYKRTTVITQGADPVVVAED---GKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKS-------IEECVKAGCYASNVVIQRSGCT--YPEKPDFN--- Arabidopsis_thaliana_AT5G19150 ------------------TSEADAESVLRTVTPSLDLKRHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVF----------CTKDAAPVIKSYPELIHPVLEESYSISQLSEEDKREVQDKVLGEVGKWMERFDCLVIGPGLGRDPFLLECVSIIMLLAKKSN----------VPFVI--DGDGLFLTNSIDLVHVLTPNVNEYKRLVQKVEVDEQNAELAKQIGGVTILRKGKSDLIS-----NGEVKSVSIYGS-----PRRCGGGDILSGGVAVFLSWAQQLKSDPESPSENPAILGCIAASGLLRKAASLAFTKHSDIIECL Arabidopsis_thaliana_AT5G37850 TPPVLSLALPSGRVLSIQSHTVQGYVGN----KSAVFPLQLLGYDVD-PINSVQFSNHTGYPTFKGQVLNGQQLCDLI--EGLEANDLLFYTHVLTGYI--------GSVSF-----------------LDTILEVINKLR-----------SVNPNLTYVCDPVMGDEGKL------------YVPEELVHVYEKVVPLASMLTPNQFEAEKLTGLRSEEDGREALHAAGPSKVVITSITIGGILLHQKEKGLPEQFKIL--IHKIPAYFTGTGD-LMTALLLGWSNKYP-----DNLDKAAELAVSTLQALLRRTLDRAGYDPTSSSLEIR Arabidopsis_thaliana_AT5G43910 AIPGQPIVLGCGQLCLDYLVTVASFPIPDQKIRGTSFKVQGGGNTGNALTCVARLGLPCRILAKVADDSHGRYMVEELESSGVDTSFCMSAKDGASHFNYVIV--DNQTNTRTCIYTPGYPPLLPDDLTESLLLDVLDGVRVLYVNGRSRE---------AELLLAQK-A-------HSKIPILINAEKKRTGLDELIDLADYAICSTNFPQEWTGAPSPSALLSMIRLPKLKFVIMTLGEHGCVMLTGNVTGRVIVTAEK-IPSSELIDTTGAGDAFTGALLYGLCTGMA-------LEEMLTFASRVAACCCRGLGARTSLPYRPNLATFL Arabidopsis_thaliana_AT5G51830 TRDSETLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGVSRLGGSSAFIGKVGDDEFGRMLADILRLNNVDNSGMRFDHNARTALAFVTLR-GDGEREFLFFRHPSADMLLLE---SELDKNLIQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYDPNLRLPLWPSEEAARKEIMSIWNLADVIKISEDEITFLTGGDDPYDDDVVLFHPNLKLLVVSEGPNGCRYYTQEFKGRVGGVKVK-P-----VDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACGAITVTERGAIPAMPSMDAVQDLL Arabidopsis_thaliana_AT5G58730 IPNRRVLI--VGNYCHDVLIQNGSV-----------VAETLGGAASFISNVLDSSSVSCDLVSKVGHD---------FRYEVTHSPIVAPEKETTVFEAYFDLGDGIGHADRVLKRVSACDPILPS----DIPDSRFDFGMAVGVGGEILPETLEKMVEICDVVAVDIQALIRVFDPVDGAVKLVDLKE--SGFYHILHRIGFLKASSDEALFMDVEQ----------MKHLCCVVVTNGEKGCRIYHKDDEMTVPPFLAK-Q-----VDPTGAGDSFLGGLIVGLVEGLT-------VPDAALLGNLFGSITVEHIGQMMLQKVKDEVQRRK Arabidopsis_thaliana_AT1G06730 VVEKPIDVSTLGNLCVDIVLSVHELPPPELSMSPPDKKYWEAGGNCNMAIAAARLGLHCVAIGHVGDEIYGEFLLDVLHEEGIGTVALNGGTNEKDTSSFICWVVDPLQRHGFCSRADEEPAFSWITDLSDEVKMAIRQSKVLFCNGYDFD-DFSPSFIMSTIDYAAKVGTAIFFDPGPRKSLSKGTPDERRALAHFLRMSDVLLLTSEEVEALTGIRPVKAGQEIRNGKGTKWVIVKMGPKGSILVTKSSVSVAPAFKVE-V-----VDTVGCGDSFVAAIALGYIRNMP-------LVNTLTIANAVGAATAMGCGAGRNVAKRHQVVDLM Arabidopsis_thaliana_AT1G69200 TYGWPPLVCCFGSAQHAFVPSGRPANRLDAKWAPEKYIRAPGGCAGGVAIALASLGGKVAFMGKLGADDYGQAMLYYLNVCKVQTRSVKIDGKRVTACSTMKIS-KRGRLKSTCIKPCAEDSLS-K---SEINVDVLKEAKMFYFSTHSLLDKKMMSTTIQAIKISKQLGNVIFYDLNLPLPLWHSSEETKSFIQEVWNLADVIEITKQELEFLCGIEEEFDTENNLWHENLKVLFVTNGTSKIHYYTKEHNGAVSGMEDV-PITPFTRDMSASGDGIVAGLIRMLTVQPDLMNNKGYLERTARYAIECGIIDQWLLAQTRGYPPKDDMEEEE ; END; BEGIN TREES; Title Arabidopsis_PFKB; LINK Taxa = Taxa; TRANSLATE [0] 1 Arabidopsis_thaliana_AT1G06020, [1] 2 Arabidopsis_thaliana_AT1G06030, [2] 3 Arabidopsis_thaliana_AT1G17160, [3] 4 Arabidopsis_thaliana_AT1G19600, [4] 5 Arabidopsis_thaliana_AT1G22940, [5] 6 Arabidopsis_thaliana_AT1G49350, [6] 7 Arabidopsis_thaliana_AT1G66430, [7] 8 Arabidopsis_thaliana_AT2G31390, [8] 9 Arabidopsis_thaliana_AT3G09820, [9] 10 Arabidopsis_thaliana_AT3G54090, [10] 11 Arabidopsis_thaliana_AT3G59480, [11] 12 Arabidopsis_thaliana_AT4G10260, [12] 13 Arabidopsis_thaliana_AT4G27600, [13] 14 Arabidopsis_thaliana_AT4G28706, [14] 15 Arabidopsis_thaliana_AT5G03300, [15] 16 Arabidopsis_thaliana_AT5G19150, [16] 17 Arabidopsis_thaliana_AT5G37850, [17] 18 Arabidopsis_thaliana_AT5G43910, [18] 19 Arabidopsis_thaliana_AT5G51830, [19] 20 Arabidopsis_thaliana_AT5G58730, [20] 21 Arabidopsis_thaliana_AT1G06730, [21] 22 Arabidopsis_thaliana_AT1G69200; TREE Fig._1 = (((((((1:0.039846,2:0.037452):0.066834,8:0.029256):0.051545,11:0.061366):0.177344,12:0.226047):0.068449,(7:0.176608,19:0.18731):0.082703):0.036028,(10:0.289285,22:0.580325):0.785176):0.677069,3:1.051649,4:1.241299,(5:2.795794,20:1.599276):0.259539,6:1.475911,(9:0.059895,15:0.016979):1.498004,13:1.584547,(14:0.320219,18:0.25042):0.939521,16:2.604661,17:2.300504,21:1.426301):0.0; END;