#NEXUS [written Tue Apr 18 18:39:22 JST 2017 by Mesquite version 3.2 (build 801) at SUSUMU-no-MacBook-Pro.local/192.168.11.3] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=9; TAXLABELS Erysiphe_sp._LC028977_ex_F._lanuginosa_Japan Erysiphe_sp._LC028982_ex_F._apertisquamifera_Japan Erysiphe_sp._LC028978_ex_F._lanuginosa_Japan Erysiphe_fraxinicola_LC028979_ex_F._longicuspis_Japan Erysiphe_salmonii_LC028981_ex_F._mandshurica_Japan Erysiphe_salmonii_KW70587F_ex_F._excelsior_Ukraine Erysiphe_salmonii_KW70591F_ex_F._rhynchophylla_Ukraine Erysiphe_salmonii_ Erysiphe_liquidambaris_LC028984_ex_Liquidambar ; END; BEGIN CHARACTERS; TITLE 'Matrix in file "Fraxinus_ITS+28S.nexus"'; DIMENSIONS NCHAR=1417; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Erysiphe_sp._LC028977_ex_F._lanuginosa_Japan CTGAGCGTGTGAGACTCAGCTGCGGCATCAGTCGTAGCCTGAGTTGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGCAGCCCAATGCAA---------------------------------------------------GTGCCGCCCACCGGCTTCGGCCGGAGCGTGTCCGCCAGAGATATGAATAAACCAAAACTCGTGTTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTC-CTTTTGCGAGCGAGTGTGTTTCGGTGTTGGGGCTCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGAGAGCTCTACGCGTAGTACTTTATATCTCGCGACAGGGCGTCGTCGGCGACTAGCCAAGCTCAACCAACTCCTTTTACATACCAAGTAGTATCAAAGGTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTATCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGCCGTTA---CGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCTCGGCCTAAGTTCCTTGGAACAGGACGTCAAAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGGTTTTTCCCTGGTGCACTCGGCAGTGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCGTCGACCGATCCTGATGTCTTCGGATGGATTTGAGT Erysiphe_sp._LC028982_ex_F._apertisquamifera_Japan CTGAGCGTGTGAGACTCAGCTGCGGCATCTGTCGTAGCCTGAGTTGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGCAGCCCAATGCAA---------------------------------------------------GTGCCGCCCACCGGCTTCGGCCGGAGCGTGTCCGCCAGAGATATGAATAAACCAAAACTCATGTTGTTCCGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTC-CTTTTGCGAGCGAGTGTGTTTCGGTGTTGGGGCTCGTCGAATTCGTTCGGCGGCCCTTAGAGACAGTGGCGGTAAC-GGCGAAAGCTCTACGCGTAGTACTTTATATCTCGCGACAGGGCGTCGTCGGCGACTAGCCAAGCTCAACCAACTCCTTTTACATACCAAGTTGTATCAAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Erysiphe_sp._LC028978_ex_F._lanuginosa_Japan -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGCCGTTA---CGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCTCGGCCTAAGTTCCTTGGAACAGGACGTCAAAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGGTTTTTCCCTGGTGCACTCGGCAGTGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT Erysiphe_fraxinicola_LC028979_ex_F._longicuspis_Japan -----------------------------------------------------------GTGTCGACGTGTATCCTGTTGCTTTGGTGGGCCGGGTGCCCCGATGCATGAGCCGCTGGACCAGATGCTGCTTCTGCGGCGGTTTGGCGAGCGCAGTGCAGGGCTGCCCACCGGCTCCGGCCGGAGCGTGTCCGCCAGAGACATAATCAAACCAAAACTCGTGGTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACACCCCCCCTCAAGCCCTC-CTTTTGCGAGTGAGCGTGCTTCGGTGTTGGGGCTCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGGGAGCTCTACGCGTAGTACTTTGCATCTCGCGACAGGGCGCCGCCGGTGACTTGCCAAGCGCAACCAACCCC------------------------------------------------------------------------------------------------------------AGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGTCGTCG---TGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCCCGGCCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGGCGCTGCTGATCATCTAGGG-TTCTCCCTGGTGCACTCGGCAGCGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGACGCAATGCAGCCCAGTCGGACCGAGGATCGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT Erysiphe_salmonii_LC028981_ex_F._mandshurica_Japan CTGAGCGTGTGAGACTCAGCTGCGGCATCTGTCGTGGCCGGAGTCGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGTTGCCCGACGCAAGTGCCGCTGGACCAGAAGCTGCTT-TGCGGCGGTTTGGCGCGCGCGGTGCTGTGCCGCCCACCGGCTCCGGCCGGAGCGTGTCCGCCAGAGATATAAATAAATCAAAACTCGTGTTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTG-CTTTTGCGAGTGAGTGTGCTTCGGTGTTGGGGCGCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGAGAGCTCTACGCGTAGTACTTTACATCTCGCGACAGGGCGTCGTCGGCGACTAGCCAAGTTCAACCACCCCCTTTCACATACCAAGTTGTATCAAAGGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTACCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGTCGTTA---TGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCCCGGCCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGG-TTTTCCCTGGTGCACTCGGCAGCGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAA-CTTTCGGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT Erysiphe_salmonii_KW70587F_ex_F._excelsior_Ukraine CTGAGCGTGTGAGACTCAGCTGCGGCATCTGTCGTGGCCGGAGTCGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGTTGCCCGACGCAAGTGCCGCTGGACCAGAAGCTGCTT-TGCGGCGGTTTGGCGCGCGCGGTGCTGTGCCGCCCACCGGCTCCGGCCGGAGCGTGTCCGCCAGAGATATAAATAAATCAAAACTCGTGTTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTG-CTTTTGCGAGTGAGTGTGCTTCGGTGTTGGGGCGCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGAGAGCTCTACGCGTAGTACTTTACATCTCGCGACAGGGCGTCGTCGCCGACTAGCCAAGTTCAACCACCCCCTTTCACATACCAAGTTGTATCAAAGGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTACCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGTCGTTA---TGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCCCGGCCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGG-TTTTCCCTGGTGCACTCGGCAGCGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCATCGACCGA--------------------------- Erysiphe_salmonii_KW70591F_ex_F._rhynchophylla_Ukraine CTGAGCGTGTGAGACTCAGCTGCGGCATCTGTCGTGGCCGGAGTCGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGTTGCCCGACGCAAGTGCCGCTGGACCAGAAGCTGCTT-TGCGGCGGTTTGGCGCGCGCGGTGCTGTGCCGCCCACCGGCTCCGGCCGGAGCGTGTCCGCCAGAGATATAAATAAATCAAAACTCGTGTTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTG-CTTTTGCGAGTGAGTGTGCTTCGGTGTTGGGGCGCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGAGAGCTCTACGCGTAGTACTTTACATCTCGCGACAGGGCGTCGTCGGCGACTAGCCAAGTTCAACCACCCCCTTTCACATACCAAGTTGTATCAAAGGTTGACCTCGAATCAGGTAGGAATACCCGCTG-ACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTACCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGTCGTTA---TGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCCCGGCCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGG-TTTTCCCTGGTGCACTCGGCAGCGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCATCGAC------------------------------ Erysiphe_salmonii_ CTGAGCGTGTGAGACTCAGCTGCGGCATCTGTCGTGGCCGGAGTCGAACCCCTCCACCCGTGTCGACGTGTATCTTGTTGCTTTGGCGGGCCGGGTTGCCCGACGCAAGTGCCGCTGGACCAGAAGCTGCTT-TGCGGCGGTTTGGCGCGCGCGGTGCTGTGCCGCCCACCGGCTCCGGCCGGAGCGTGTCCGCCAGAGATATAAATAAATCAAAACTCGTGTTGTTCTGTAGTCTAAGGCAAAAGATTTTAATCAC----AATTG-ATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA-CCCCCCTCAAGCCCTG-CTTTTGCGAGTGAGTGTGCTTCGGTGTTGGGGCGCGTCGAATTCGTTCGGCGGCCCTTAAAGACAGTGGCGGTAAC-GGCGAGAGCTCTACGCGTAGTACTTTACATCTCGCGACAGGGCGTCGTCGCCGACTAGCCAAGTTCAACCACCCCCTTTCACATACCAAGTTGTATCAAAGGTTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTACCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCGTCGTTA---TGGCGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGCGGGCCCGGCCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTCTGCGGCCGTGGCTCCTGCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC-TTGGACGCTACTGATCATCTAGGG-TTTTCCCTGGTGCACTCGGCAGCGGACAGGCCAGCATCGGTTCGAGTGGCTGGAGAAAGGTTGTAGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCTACGGCGCAATGCAGCCCAGTCGGACCGAGGAACGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGCGTT-AAACCCATACGCGGAATGAAAGTGAACGTAGGTGAGAACCTTTCGGGGTGCATCATCGAC------------------------------ Erysiphe_liquidambaris_LC028984_ex_Liquidambar CTGAGC--GCGAGACCTAGCCGTGGCATCTGCTGCGCGCTGGGTCGACCCCTCCAACCCGTGTTGACTTATATCTTGTTGCTTTGGCGGGCCCGG--GCC---TGCACCAGTCACCGGCGTCGAGCCAGTGTCCGC------------------GTGTGGTGCAGCCCACCGGCTTCGGCTGGAGCGCGTCCGCCAGAGACTCCAACCCAAAACTTCAGATATGTTAATGTGTCGTCTAAGAAAATAGTACCGATTTATGGAATTGAATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATAACA--CCCCGTCGAGCCATCACATGTGTG---------GTTTCGGTGTTGGGGTTCGTCGG----TGACGGCGGCCCTTAAAGGCAGTGGCGGTGCCTGGTGTCGGCTCTACGCGTAGTACTCGATATCTCGCGACAGAGTGGTGCTGGCGGCTAGCCA-----------------------------------------TTGACCTCGAATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACCGGGATTACCTCAGTAACGGCGAGTGAAGCGGTAACAGCTCAAATTTGAAATCTGGCTCCCTTAGCCGGGAGTCCGAGTTGTAATTTGTAGAAGATGCTTTGGGTTGTGGGCTTGGCCTAAGTTCCTTGGAACAGGACGTCGTAGAGGGTGAGAATCCCGTATGCGGCCGAGG--CCTACGCCTGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATGGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTTGGGCACTGCTGATCAGCCGGAG-TTCTCTCCGATGCACTCGACAGCGCACAGGCCAGCATCGGTTTGGGTGGCTGGATAAAGGCCGTAGGAACGTAGCTCCTTCCGGGGAGTGTTATAGCCTATGGTGCCATGCAGCCCATCCGGACCGAGGACCGCGCCTTCGGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGAAGTCTAACATCTATGCGAGTGTTTGGGCGTCAAAACCCATACGCGGAATGAAAGTGAACG-------------------------------------------------------------- ; END; BEGIN TREES; Title 'Trees from "Fraxinus_ITS+28S.nexus"'; ID 015b806c34871; LINK Taxa = Taxa; TRANSLATE [0] 1 Erysiphe_sp._LC028977_ex_F._lanuginosa_Japan, [1] 2 Erysiphe_sp._LC028982_ex_F._apertisquamifera_Japan, [2] 3 Erysiphe_sp._LC028978_ex_F._lanuginosa_Japan, [3] 4 Erysiphe_fraxinicola_LC028979_ex_F._longicuspis_Japan, [4] 5 Erysiphe_salmonii_LC028981_ex_F._mandshurica_Japan, [5] 6 Erysiphe_salmonii_KW70587F_ex_F._excelsior_Ukraine, [6] 7 Erysiphe_salmonii_KW70591F_ex_F._rhynchophylla_Ukraine, [7] 8 Erysiphe_salmonii_, [8] 9 Erysiphe_liquidambaris_LC028984_ex_Liquidambar; TREE 'PAUP_3' = (((((1,2),3),(5,(6,8),7)),4),9); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1417; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1417; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1417; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1492508362952; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2905209427988706100; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 85796441034819372; mqVersion 320; checksumv 0 3 3197957682 null getNumChars 1417 numChars 1417 getNumTaxa 9 numTaxa 9 short true bits 15 states 15 sumSquaresStatesOnly 219991.0 sumSquares 219991.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 183; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1404 758; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2905209427988706100 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 015b806c34871; toggleUseWeights off; endTell; setAssignedID 978.1492508345832.793494577602643815; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1221 686; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #85796441034819372 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 312; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1221 686; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;