NEXUS [File created by TreeBASE: 1/16/09 15:36:00] [Matrix accession#: M3953] BEGIN TAXA; TITLE M3953; DIMENSIONS NTAX=12; TAXLABELS Gentiana_decora Megacodon_stylophorus Latouchea_fokienensis Swertia_tashiroi Gentianella_quinquefolia Obolaria_virginica Bartonia_paniculata_subsp._paniculata Bartonia_texana Bartonia_paniculata_subsp._iodandra Bartonia_verna Bartonia_virginica Bartonia_virginica_KM35 ; END; BEGIN CHARACTERS; TITLE M3953; DIMENSIONS NCHAR=1000; FORMAT DATATYPE = DNA MISSING = ? GAP = - SYMBOLS = " 01 " ; MATRIX Gentiana_decora AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGGCAATCCTGAGCCAAATCCTATTTTTCG----------AAAAAGCAAAAA-GAAAGGCTTAGAAAGAAATAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGGTTGCGTTGGTAAAGAAACCTTTCTACCAAAAATC-----CCAAAAGGATGAAGAAGAGGGGTATATACAGACTGTATCAAACGATTCACCCACAGCCTGTAGATCTTTTCACGAACGGATTAATCGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATGCCGACAACAATGAAATTTATAGTAAGAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAACCTATTTTTCTT--------CCCCGACCCTTTATGCCTATCCCCTTTTATTT--------------TCTTACGGGTTGAAAATTCCCGATGCACCCGCCCTATTCTATATT--CTATATTCTATTTGTCTATATTCTATTTG-ATTCGTTTAGTTTTTAGTTTATAAATAGATCTGGGGAGAAATGCCTTTCTCTT------ATTACAT---------GT--------------------TAT-----------------------ATATGAG---AAT--------------ATATCAAAATGAACA----TCTTTGAGA------------------------AAAAACCCCGT---------GCGTACTGTTAATTGACAAAGACCCCATCCTCTAATAAA------------------------ATTAAGGATGCTGCATTGGGACTG1011001100100001?000??????00001?000000100000001?00?10?001?1?11011???10000???0??10 Megacodon_stylophorus AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGCTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGGCAATCCTGAGCCAAATCCTATTTTTCA----------AAAAAGCAAAAA-GAAAAGCTCAGAAAGAAAAAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGATTGCGTTGGTAAAGAAACCTTTTCACCAAAAATT-----CCGAAAGGATGAAAAAGAAAGGTATATACAGACTGTATCAAATGATTCACCCACAGCCTGTAGATCTTTTCACGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATGCCGACAACAATGAAATTTATAGTGAGAGGAAAA??????????????????????????????????????????????????GCCTATTTTACTT--------CCCCGACCCTTT-TGCTTATCCACCTTTTTGT------------TTTGTTAGAGGTTGAAAATTCCTGATGCACCCGCCCTATTCTATATT------------------------CTATTTGTATTTGATTCGTTT-------ATAAATAGATCTGGGCAGAAATGCCTTTCTCTTTAGAATAGTATATATAAATGTAGTATATATAAATTATAAATGAACATCTTTGAGAAAAA------ACTCCATTTGAACGAAATCGGTACCATTCCTCATACTGAAATTTACAAAGTTTTTTAAGACCCAAGAGCTTCTA-GGACCTAGATAAAACTTTGTAACCTTCTTGCGTACTGTTAATTGACAAAGACCCCATCCTCTAATAAA-------------------------ATAAGGATGCTACATTGGGACTG1011001100100001?100???1??0000??1??0?0001?00?0000000000000010000001000000???1???0 Latouchea_fokienensis AATTGGATTGAGCCTTGGTATGGAAACTTACTAAGTGATAATTTTCAAATTCAGAGAAACCCGGGAATTAATAA------AAAGGGCAATCCTGAGCCAAATCCTATTTTTCA---------AAAAAAGCAAAAA--AAAGACTCAGAAAGAAAAAAA-----GGATAGGCGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGATTGCATTGGCAAAGAAACCTTTTCACCAAAAATT-----CCGAAAGGATGAAGAATAAAGGTATATACAGACTGTATCAAATGATTCACCTACAGCCTGTAGATCTTTTCACGAAATGATGAATCGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATACCGACAACAATGAAATTTATAGTGAGAGGAAAA??????????????????????????????????????????????????GCCTATTTTACTT---TACTTCCCCGACCCTTT-TGCTTATCCACCTTTTTGT------------TTTGTTAGAGGTTGAAAATTCCTGATGCACCCGCCCTA------ATT--CTATAT---------------TCTATTTGTATTTGATTCGTTT--AG-----AAATAGATCTGGGCAGAAATGCCTTTCTCTTT--AATATTA-ATAAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAG------------------AAAA-TAAGGATGCTATACTGGGACTG100?1011001000001100???1??01?01?00?010000110?0011000???1?????????????????0?001001 Swertia_tashiroi AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAATTTTCAAATTCAGAGAAACCCTGGAATTAATAATAATAAAAAGGGCAATCCTGAGCCAAATCCTATTTTTCA----------AAAAAGCAAAAA-GAAAGGCTCAGAAAGAAAAAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGATTGCGTTGGTAAAGAAACCTTTTCACCAAAAATT-----CCGAAAGGATGAAAAAGAAAGGTATATACAGACTGTATCAAATGATTGACCCACAGCCTGTAGATCTTTTCACGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATGCCGACAACAATGAAATTTATAGTGAGAGGAAAA??????????????????????????????????????????????????GCCTATTTTACTT--------CCCCGACCCTTT-TGCTTATCCACCTTTTTGT------------TTTGGTAGAGGTTGAAAATTCCTGATGCACCCGCCCTATTCTATATT--CTATTT-----------GGA---TATTTGTATTTGATTCGTTTA-------TAAATAGATCTGGGCAGAAATGCCTTTCTCTTTAGAATAGTATA------T----------------ATAAATGAACATCTTTGAGAAAAA------ACTCCATTTGAACGAAATCGGTACCATTCCTCATACTGCAATTTACAAAGTTTTTTAAGACCCAAGAGCTTCTA-GGACCTAGATAAAACTTTGTAACCTTCTTGCGTACTGTTAATTGACAAAGACCCCATCCTCTAATAAA-------------------------ATAAGGATGCTACATTGGGACTG0011001100100001?100??01??00001?001100010000?00001001?000?010000001000000???1???0 Gentianella_quinquefolia AATTGGATTGAGCCTTGGTATGGAAACCTGCTAAGTGCTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAGGGGCAATCCTGAGCCAAATCCTATTAAATATTCAAATCAAAAAAAGCAAAAA-GAAAGGCTCAGAAAGAAAAAAAA----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGATTGCGTTGGTAAAGAAACCTTTTCACCA-AAATT-----CCGAAAGGATGAAAAAGAAAGGTATATACAAACTGTATCAAATGATTCACCCACAGCCTGTGGATCTTTTCACGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATGCCGACAACAATGAAATTTATAGTGAGAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTGACTT--------CCCCGACCCTTT-TGGTTATCTGGTTATCCCC---TTTTTG--TTTTGTTAGAGGTTGAAAATTCCTGATGCACCCGCCCTATTCTATATT--CTATTC----------------------GTATTTGATTCGTTTC-------TAAATAGATCTGGGAAGAAATGCCT----------AATAGTATATAGAAATGTAGTATAT-------ATAAATGAACACCTTTGAGAAAAA------ACTCCATTTGAACGAAATCGGTACCATTTCTCATACTGAAATTGACAAAGTTTTTTAAGACCCAAGAGCTTCTA-GGACCTAGATAAAACTTTGTAACCTTCTT-CGTACTGTTAATTGACAAAGACCCCATTCTCTAATAAC-----------------TAATAAAA-TAAGGATGCTACATTGGGACTG1001000101100001?100?1001000001?00?0?1010000?10?00000?0001010000001001000?0000101 Obolaria_virginica AATTGGATTGAGCCTTGGTATGGAAACCTAATAAGTTATAATTTTCAAATTCAGAGAAACCCCGGAATTAATAA------AAAGGGCAATCCTGAGCCAAATCCTATTTTTCA----------AAAAAGCAAAAAAGAAAGGCTCAGAAAGAAAAAAGGAAAAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACA-------AATGGAGTTGATTACATTGGTAAAGAAACCCTTTCACCAAAAATT-----CCGAAAGGATGAAGAATAAGGGTATATACAGACTGTATCAAATGATTCACCCACAGCCTGTAGATCTTTTCACGAAATGATTAATAGGACGAGAATAAAGAGAGAGTCCCGTTCTGCATGTCAATGCCGACAACAATGAAATTTATAGTGAGAGGAAAA??????????????????????????????????????????????????GCCTATTTTACTTCTTTACTTCTCCGACCCTTT-TGCTTATCCACCTTTTTGT-----TTTG---TTTGTTAGAGGTTGAAAATTCCTGATGCACCCGCCCTATTCT-TATT--CTATAT---------------TCTATTTGTATTTGATTCCTTTC--GTTTATAAATAGATCTGGGCAGAAATGCCTTTCTCTATAGATTAATATATAAAAAT----------------------GAACATCTTTTGGAAAAACCCCG-TTTGAATTTTAACGAAATCGGTATCATTCCTCATACTTAAATTTACAAGGTTTTTTAAGACCCAAGAGCTTCTA-GGACCTAGATAAAACTTTGTAACCGTCTTGCGTACTGTTAATTGACAAAGACCCCACCCTCTAATAAAAATAAACTAATAAAATCTAATAAAA-TAAGGATGCTACATTGGGACTG10100001001000000100??10?100101?00?010000001?0000000??100?00000000100000000000001 Bartonia_paniculata_subsp._paniculata AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGCAAAAA-GAAAGACTCAGACAGAAAAAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATGGAGTTAATTGCGTTG-------AACCTTTTCAAAACAAATT-----CCAAAAGGATGAAAAA-AAA-GTATATCTCTACTATATCAAATGATTCATCCACAGACTGTAGATCTTTTCAAGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAATCCGTCGACTTTTCAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTTACTT--------CCCCGCCCCTTT-TGCTTATCCACTTTATTAT-----TTTATTTTTTATTAG-GGTTAAAAATTCCTGATGTACCCGCCCTATTCTATATTTTCTAT---------------ATTCTATTTGTATTTGATTCGTTTA-AACTTATAAATAGATCTGGGCAGAAATGCCTTTTTCTTTCGAATAGTATATAGAAAT----------------ATAAATAAATATCTTTAATAAAAA------ACTCTATTTGAACGAAATAAGTACCATTCCTCATATTGAAATTTACAAAGTTTTTTAAAACACAAGAGCTTATA------TAGATAAAACTTTTTAACCTTCTTGCGTCCTGT-CATTGACAAAGACCCCATCTTCTACTAAA-------------------------ATAAGGATGCTACATTGGTACTG11?1001010101011?100??100010000001?000000000100000001?000?01000000?100010???1???0 Bartonia_texana AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGCAAAAA-GAAAGACTCAGACAGAAAAAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATGGAGTTAATTGCGTTGATAACGAAACCTTTTCAAAACAAATT-----CC-AAAGGATGAAAAA-AAAAGTATATCTCTACTATATCAAATGATTCATCCACAGACTGTAGATCTTTTCAAGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAATCCGTCGACTTTTCAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTTACTT--------CCCCGCCCCTTT-TGCTTATCCACTTTATTAT-----TTTA-TTTTTATTAGGGGTTAAAAATTCCTGATGCACCCGCCCTATTCTATATTTTCTAT---------------ATTCTATTTGTATTTGATTCGTTTA-AACTTATAAATAGATCTGGGCAGAAATGCCTTTTTCTTTCGAATAGTATATAGAAAT----------------ATAAATAAATATCTTTAATAAAAA------ACTCTATTTGAACGAAATAAGTACCATTCCTCATATTGAAATTTACAAAGTTTTTTAAAACACAAGAGCTTATAAGGATATAGATAAAACTTTTTAACCT-CTTGCGTCCTGTTCATTGACAAAGACCCCATCTTCTCCTAAA-------------------------ATAAGGATGCTACGTTGGTACTG11?1001000111001?1001?100000000001?000000000100000001?000?010000000000100???1???0 Bartonia_paniculata_subsp._iodandra AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGCAAAAA-GAAAGACTCAGACAGAAAAAAA-----GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATGGAGTTAATTGCGTTGGTAACGAAACCTTTTCAAAACAACTT-----CCAAAAGGATGAAAAA-AA--GTATATCTCGACTATATCAAATTATTCATCCACAGACTGTAGATCTTTTAAAGAAATGATTAATCGGACGAGAATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAATCCGTCGACTTTTCAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTTACTT--------CCCCGCCCCTTT-TGCTTATCCACCTTTTTTTATCATTTTA-TTTTTATTAGGGGTTCAAAATTCCTGATGCACCCGCCCTATTCTATATTTTCTAT---------------ATTCTATTTGTATTTGATTCGTTTA-AACTTATAAATAGATCTGGGCAGAAATGCCTTTTTCTTTCAAATAGTATAAA------TAGTATATAGAAA-TATAAATAAATATCTTTAATAAAAA------ACTCTATTTGAACAAAATAAGTACCATTCCTCATATTGAAATTTACAAAGTTTTTTAAAACCCAAGAGCTTATAAGGATATAGATAAAACTTTTTAACCTTCTTGCGTACTGTTCATTGACAAAGACCCCATCTTCTACTAAA-------------------------ATAAGGATGCTACATTGGTACTG11?10010001011?1?10010000000000001?00000000010000010010000010000000000000???1???0 Bartonia_verna AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAACCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGCAAAAA-GAAAGACTTAAACAGAAAAAG------GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATGGAGTTAATTGCGTTGGTAACGAAACTTTTTCACAACAAATTATAATTTAAAAGGATGAAAAAGAAAAGTATATCCCAACTATATCAAATGATTCATCCACAGACTATAGATCTTTTCAAGAAATGATTAATTGGAAGAGAATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTTACTT--------CCCCGACCCTTT-TGCTTATCCACCTTT-----------------TTATTAG-GGTTCAAAATTCCTGATGCACCTGCCCTATTCTATA------------------------TTCTATTTGTATTTGAGTCGTTTA-GACTTATAAATAGATCTGGGCCGAAATGCCCTTTTCTTTAGAACAGTATATAGAAAT----------------ATAAATAAATATCTTTAATACAAA------ACTCTATTTGAACAAAATAAGTACCATTCCTCATACTGAAATTTACAAAGTTTTTTAAAACCC------TTATA-GGATCTAGATAAAACTTTGTAACCTTCTTACGTACTGTTAATTGACAA-GACCCCATCTTCTAATAAA-------------------ATAAAA-TAAGGATGCTACATTGGTACTG11?101?000000001?1?1??????1001??0??000000000100000001?000?010000011000001?0100001 Bartonia_virginica AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAAGCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGGAAAAA-GAAAGACTTAAACAGAAAAAG------GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATAGAGTTAATTGCGTTGGTAACGAAACTTTTTCACAACAAATT-----ATAAAAGGATGAAAAAGAAAAGTATATCCCAACTATATCAAATGATTCATCCACAGACTGTAGATCTTTTCAAGAAATGATTAATTGGACGAGGATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAA??????????????????????????????????????????????????GCCTATTTTACTT--------CCCCGACCCTTT-TGCTTATCCACCTTT---------------TTTTATTAGAGGTTAAAAATTCCTGATGCACCCGCCCTATTCTATATT--CTATTCTATATTCTATTTGATTCTATTTGTATTTGATTCGTTTA-GACTTATAAATAGATCTGGGCCGAAATGCCTTTTTCTTTAGAACAGTATATAGAAAT----------------ATAAATAAATATCTTTAATAAAAATAAAAAACTCTATTTGAACAAAATAAG-ACCATTCCTCATACTGAAATTTACAAAGTTTTTTAAAACCCAAGAGCTTATA-GGATCTATATAAAACTTTGTAACCTTCTTACGTACTGTTAATTGACAAAGACCCCATCGTCTAATAAA----ATATAATAAAA-----TAAAAATAAGGATGCTACATTGGTACTG11?101?000100001?110?????000001?000000000000100000001?000?00000100100000011000000 Bartonia_virginica_KM35 AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGTTAATTTTCAAATTCAGAGAAAGCCTGGAATTAATAA------AAAGGTCAATCCTGAGCCAAATCCTATT----------------AAAAGGAAAAA-GAAAGACTTAAACAGAAAAAG------GGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACATCTAACAAATAGAGTTAATTGCGTTGGTAACGAAACTTTTTCACAACAAATT-----ATAAAAGGATGAAAAAGAAAAGTATATCCCAACTATATCAAATGATTCATCCACAGACTGTAGATCTTTTCAAGAAATGATTAATTGGACGAGGATAAAGAGAGAGTCCCATTCTGCATGTCAATGCCGACAACAATGCAATTTATAGCGAGAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGCCTATTTTACTT--------CCCCGACCCTTT-TGCTTATCCACCTTT---------------TTTTATTAGAGGTTAAAAATTCCTGATGCACCCGCCCTATTCTATATTC-CTATTCTATATTCTATTTGATTCTATTTGTATTTGATTCGTTTA-GACTTATAAATAGATCTGGGCCGAAATGCCTTTTTCTTTAGAACAGTATATAGAAAT----------------ATAAATAAATATCTTTAATAAAAATAAAAAACTCTATTTGAACAAAATAAGTACCATTCCTCATACTGAAATTTACAAAGTTTTTTAAAACCCAAGAGCTTATA-GGATCTAGATAAAACTTTGTAACCTTCTTACGTACTGTTAATTGACAAAGACCCCATCGTCTAATAAA----ATATAATAAAA-----TAAAAATAAGGATGCTACATTGGTACTG11?101?000100001?110?????0000001000000000000100000001?000?00000000100000011000000 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