#NEXUS [written Mon Apr 24 10:16:39 CEST 2017 by Mesquite version 3.2 (build 801) at HG17209/172.30.18.79] BEGIN TAXA; TITLE DMXL1; DIMENSIONS NTAX=27; TAXLABELS Homonota_andicola_LJAMMCNP_12490 Homonota_andicola_LJAMMCNP_12495 Homonota_borellii_LJAMMCNP_12116 Homonota_borellii_LJAMMCNP_12125 Homonota_darwinii_LJAMMCNP_11424 Homonota_darwinii_LJAMMCNP_9266 Homonota_spa_LJAMMCNP_10577 Homonota_spa_LJAMMCNP_5047 Garthia_gaudichaudi_IBEG1_1 Gymnodactylus_geckoides_LG_1050 Gymnodactylus_geckoides_LG_911 Phyllodactylus_kofordi_TG_266 Phyllopezus_przewalskii_LJAMMCNP_12089 Phyllopezus_pollicaris_CHUNB_57388 Homonota_rupicola_RUPI_1 Homonota_rupicola_RUPI_2 Homonota_spb_MNHNP_11409 Homonota_taragui_LJAMMCNP_14419 Homonota_taragui_LJAMMCNP_14420 Homonota_uruguayensis_UFRGS_1568 Homonota_uruguayensis_UFRGS_3929 Homonota_underwoodi_LJAMMCNP_10923 Homonota_underwoodi_LJAMMCNP_10931 Homonota_whitii_LJAMMCNP_14387 Homonota_whitii_LJAMMCNP_14388 Homonota_williamsii_LJAMMCNP_4467 Homonota_williamsii_LJAMMCNP_6517 ; END; BEGIN CHARACTERS; TITLE DMXL1_Matrix; DIMENSIONS NCHAR=959; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Homonota_andicola_LJAMMCNP_12490 GCTTTATATGTTTGGTCACCTCGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_andicola_LJAMMCNP_12495 GCTTTATATGTTTGGTCACCTCGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_borellii_LJAMMCNP_12116 GCTTTATATGTTTGGACACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_borellii_LJAMMCNP_12125 GCTTTATATGTTTGGACACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_darwinii_LJAMMCNP_11424 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_darwinii_LJAMMCNP_9266 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_spa_LJAMMCNP_10577 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_spa_LJAMMCNP_5047 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Garthia_gaudichaudi_IBEG1_1 GCTTTATATGTTTGGTCATCTAGCTGGGAAACTGCAGGAACAAACTGGTA Gymnodactylus_geckoides_LG_1050 GCTGTATATGTTTGGTCATTTGGCTGGGAAATTGCAGGAACAAACTGGTA Gymnodactylus_geckoides_LG_911 GCTGTATATGTTTGGTCATTTGGCTGGGAAATTGCAGGAACAAACTGGTA Phyllodactylus_kofordi_TG_266 ACTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Phyllopezus_przewalskii_LJAMMCNP_12089 GCTTTATATGTTTGGTCATTTGGCTGGGAAGTTGCAGGAACAAACTGGGA Phyllopezus_pollicaris_CHUNB_57388 GCTTTATATGTTTGGTCATTTGGCTGGGAAGTTACAGGAACAAACTGGGA Homonota_rupicola_RUPI_1 ?????????????????????????????????????????????????? Homonota_rupicola_RUPI_2 ?????ATATGTTTGGACACCTGGYTGGGAAATTGCAGGAACAAACTGGTA Homonota_spb_MNHNP_11409 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_taragui_LJAMMCNP_14419 ?????ATATGTTTGGACACCTGGMTGGGAAATTGCAGGAACAAACTGGTA Homonota_taragui_LJAMMCNP_14420 ?????ATATGTTTGGACACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_uruguayensis_UFRGS_1568 GCTTTATATGTTTGGACACCTGGCTGGAAAATTRCAGGAACAAACTGGTA Homonota_uruguayensis_UFRGS_3929 ?????????????????????????????????????????????????? Homonota_underwoodi_LJAMMCNP_10923 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_underwoodi_LJAMMCNP_10931 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_whitii_LJAMMCNP_14387 GCTTTATATGTTTGGTCACCTCGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_whitii_LJAMMCNP_14388 GCTTTATATGTTTGGTCACCTCGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_williamsii_LJAMMCNP_4467 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_williamsii_LJAMMCNP_6517 GCTTTATATGTTTGGTCACCTGGCTGGGAAATTGCAGGAACAAACTGGTA Homonota_andicola_LJAMMCNP_12490 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_andicola_LJAMMCNP_12495 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_borellii_LJAMMCNP_12116 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGTTCCAGGCCCT Homonota_borellii_LJAMMCNP_12125 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGTTCCAGGCCCT Homonota_darwinii_LJAMMCNP_11424 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_darwinii_LJAMMCNP_9266 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_spa_LJAMMCNP_10577 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_spa_LJAMMCNP_5047 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Garthia_gaudichaudi_IBEG1_1 AGGAAGTATTTGTCTTGCCACTGTGGGAGAATGCTAAGACTTCAGGCCCT Gymnodactylus_geckoides_LG_1050 AGGAAGTATTTGTCATGCCACTGTGGGAGAATGCTAAGACTTCAGGCCCT Gymnodactylus_geckoides_LG_911 AGGAAGTATTTGTCATGCCACTGTGGGAGAATGCTAAGACTTCAGGCCCT Phyllodactylus_kofordi_TG_266 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCTAAGACTTCAGGCCCT Phyllopezus_przewalskii_LJAMMCNP_12089 AGGAAGTATTTGTCTTGCCACTGTGGGAGAATGCTAAGACTTCAGGTCCT Phyllopezus_pollicaris_CHUNB_57388 AGGAAGTATTTGTCTTGCCACTGTGGGAGAATGCTAAGACTTCAGGTCCT Homonota_rupicola_RUPI_1 ?????????????????????????????????????????????????? Homonota_rupicola_RUPI_2 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGTTCCAGGCCCT Homonota_spb_MNHNP_11409 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_taragui_LJAMMCNP_14419 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGTTCCAGGCCCT Homonota_taragui_LJAMMCNP_14420 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGTTCCAGGCCCT Homonota_uruguayensis_UFRGS_1568 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_uruguayensis_UFRGS_3929 ?????????????????????????????????????????CCAGGCCCT Homonota_underwoodi_LJAMMCNP_10923 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_underwoodi_LJAMMCNP_10931 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_whitii_LJAMMCNP_14387 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_whitii_LJAMMCNP_14388 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_williamsii_LJAMMCNP_4467 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_williamsii_LJAMMCNP_6517 AGGAAGTATTTGTCTTGCCGCTGTGGGAGAATGCCAAGGCTCCAGGCCCT Homonota_andicola_LJAMMCNP_12490 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_andicola_LJAMMCNP_12495 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_borellii_LJAMMCNP_12116 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_borellii_LJAMMCNP_12125 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_darwinii_LJAMMCNP_11424 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_darwinii_LJAMMCNP_9266 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_spa_LJAMMCNP_10577 TCCGGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_spa_LJAMMCNP_5047 TCCGGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Garthia_gaudichaudi_IBEG1_1 TCAAGATTTGTATTGCTGCGATGTGTGGATTTAGTATCATCTGTAGAAGG Gymnodactylus_geckoides_LG_1050 TCAAGATTTGTATTGCTGCGATGTGTGGATTTAGTATCATCTGTAGAAGG Gymnodactylus_geckoides_LG_911 TCAAGATTTGTATTGCTGCGATGTGTGGATTTAGTATCATCTGTAGAAGG Phyllodactylus_kofordi_TG_266 TCCAGATTTGTATTGCTGCGTTGTGTGGATTTAATATCATCTGTGGAAGG Phyllopezus_przewalskii_LJAMMCNP_12089 TCAAGATTTGTATTGCTGCAATGTGTGGATTTAGTATCATCTGTAGAAGG Phyllopezus_pollicaris_CHUNB_57388 TCAAGATTTGTATTGCTGCGATGTGTGGATTTAGTATCATCTGTAGAAGG Homonota_rupicola_RUPI_1 ??????????????????????????GGATTTAATATCATCTGTAGAAGG Homonota_rupicola_RUPI_2 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_spb_MNHNP_11409 TCCGGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_taragui_LJAMMCNP_14419 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_taragui_LJAMMCNP_14420 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_uruguayensis_UFRGS_1568 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_uruguayensis_UFRGS_3929 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_underwoodi_LJAMMCNP_10923 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_underwoodi_LJAMMCNP_10931 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_whitii_LJAMMCNP_14387 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_whitii_LJAMMCNP_14388 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_williamsii_LJAMMCNP_4467 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_williamsii_LJAMMCNP_6517 TCCAGATTTGTATTGCTGCGATGTGTGGATTTAATATCATCTGTAGAAGG Homonota_andicola_LJAMMCNP_12490 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_andicola_LJAMMCNP_12495 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_borellii_LJAMMCNP_12116 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_borellii_LJAMMCNP_12125 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_darwinii_LJAMMCNP_11424 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_darwinii_LJAMMCNP_9266 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_spa_LJAMMCNP_10577 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_spa_LJAMMCNP_5047 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Garthia_gaudichaudi_IBEG1_1 CTCACCCCCTTTACCTGTTTCTTTATCTTGGGTTCGTGATGGCATCCTTG Gymnodactylus_geckoides_LG_1050 CTCACCCCCTTTACCTGTTTCTCTGTCTTGGGTTCGTGATGGCATCCTTG Gymnodactylus_geckoides_LG_911 CTCACCCCCTTTACCTGTTTCTCTGTCTTGGGTTCGTGATGGCATCCTTG Phyllodactylus_kofordi_TG_266 CTCACTCCCTTTACCTGTTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Phyllopezus_przewalskii_LJAMMCNP_12089 CTCACCCCCTTTACCTGTTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Phyllopezus_pollicaris_CHUNB_57388 CTCACCCCCTTTACCTGTTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_rupicola_RUPI_1 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_rupicola_RUPI_2 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_spb_MNHNP_11409 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_taragui_LJAMMCNP_14419 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_taragui_LJAMMCNP_14420 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_uruguayensis_UFRGS_1568 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_uruguayensis_UFRGS_3929 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_underwoodi_LJAMMCNP_10923 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_underwoodi_LJAMMCNP_10931 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_whitii_LJAMMCNP_14387 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_whitii_LJAMMCNP_14388 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_williamsii_LJAMMCNP_4467 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_williamsii_LJAMMCNP_6517 CTCACCCCCTTTACCCATTTCTTTGTCTTGGGTTCGTGATGGCATCCTTG Homonota_andicola_LJAMMCNP_12490 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_andicola_LJAMMCNP_12495 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_borellii_LJAMMCNP_12116 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_borellii_LJAMMCNP_12125 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_darwinii_LJAMMCNP_11424 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_darwinii_LJAMMCNP_9266 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_spa_LJAMMCNP_10577 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_spa_LJAMMCNP_5047 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Garthia_gaudichaudi_IBEG1_1 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTTTT Gymnodactylus_geckoides_LG_1050 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTCTT Gymnodactylus_geckoides_LG_911 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTCTT Phyllodactylus_kofordi_TG_266 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTCTT Phyllopezus_przewalskii_LJAMMCNP_12089 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTCTT Phyllopezus_pollicaris_CHUNB_57388 TAGTTGGAATGGATTGTGAAATGCATGTTTATTCTCAGTGGCAGCCTCTT Homonota_rupicola_RUPI_1 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_rupicola_RUPI_2 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_spb_MNHNP_11409 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_taragui_LJAMMCNP_14419 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_taragui_LJAMMCNP_14420 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_uruguayensis_UFRGS_1568 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_uruguayensis_UFRGS_3929 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_underwoodi_LJAMMCNP_10923 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_underwoodi_LJAMMCNP_10931 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_whitii_LJAMMCNP_14387 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_whitii_LJAMMCNP_14388 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_williamsii_LJAMMCNP_4467 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_williamsii_LJAMMCNP_6517 TAGTTGGAATGGATTGCGAAATGCATGTTTATTCTCAGTGGCAACCTCTT Homonota_andicola_LJAMMCNP_12490 TCAAAGCAAGAGTCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_andicola_LJAMMCNP_12495 TCAAAGCAAGAGTCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_borellii_LJAMMCNP_12116 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_borellii_LJAMMCNP_12125 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_darwinii_LJAMMCNP_11424 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_darwinii_LJAMMCNP_9266 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_spa_LJAMMCNP_10577 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_spa_LJAMMCNP_5047 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Garthia_gaudichaudi_IBEG1_1 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Gymnodactylus_geckoides_LG_1050 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Gymnodactylus_geckoides_LG_911 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Phyllodactylus_kofordi_TG_266 TCAAAGCAAGACCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Phyllopezus_przewalskii_LJAMMCNP_12089 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Phyllopezus_pollicaris_CHUNB_57388 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_rupicola_RUPI_1 TCAAAGCAAGAGCCTGTTTCCATAGACTCGTACAGTGGGAGTACACCATC Homonota_rupicola_RUPI_2 TCAAAGCAAGAGCCTGTTTCCATAGACTCGTACAGTGGGAGTACACCATC Homonota_spb_MNHNP_11409 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_taragui_LJAMMCNP_14419 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_taragui_LJAMMCNP_14420 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_uruguayensis_UFRGS_1568 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_uruguayensis_UFRGS_3929 TCAAAGCAAGAGACTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_underwoodi_LJAMMCNP_10923 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAATGGGAGTACACCATC Homonota_underwoodi_LJAMMCNP_10931 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAATGGGAGTACACCATC Homonota_whitii_LJAMMCNP_14387 TCAAAGCAGGAGTCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_whitii_LJAMMCNP_14388 TCAAAGCAAGAGTCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_williamsii_LJAMMCNP_4467 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_williamsii_LJAMMCNP_6517 TCAAAGCAAGAGCCTGTTTCCATAGACTCCTACAGTGGGAGTACACCATC Homonota_andicola_LJAMMCNP_12490 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_andicola_LJAMMCNP_12495 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_borellii_LJAMMCNP_12116 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_borellii_LJAMMCNP_12125 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_darwinii_LJAMMCNP_11424 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_darwinii_LJAMMCNP_9266 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_spa_LJAMMCNP_10577 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_spa_LJAMMCNP_5047 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Garthia_gaudichaudi_IBEG1_1 CATAATAAGTTTAATGAAACAAAACCAATCATCTGGTCTCCACCCACCAA Gymnodactylus_geckoides_LG_1050 CATAATAAGTTTAATGAAACAAAACCAATCATCTGGTCTCCACCCACCAA Gymnodactylus_geckoides_LG_911 CATAATAAGTTTAATGAAACAAAACCAATCATCTGGTCTCCACCCACCAA Phyllodactylus_kofordi_TG_266 CATAATAAGTTTAATAAAACAAAACCAGTCATCTGGTCTCCACCCACCAA Phyllopezus_przewalskii_LJAMMCNP_12089 CCTAATAAGTTTAATGAAACAAAACCAATCATCTGGTCTCCACCCACCAA Phyllopezus_pollicaris_CHUNB_57388 CATAATAAGTTTAATGAAACAAAACCAATCATCTGGTCTCCACCCACCAA Homonota_rupicola_RUPI_1 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_rupicola_RUPI_2 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_spb_MNHNP_11409 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACGCACCAA Homonota_taragui_LJAMMCNP_14419 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_taragui_LJAMMCNP_14420 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_uruguayensis_UFRGS_1568 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGCCTCCACCCACCAA Homonota_uruguayensis_UFRGS_3929 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_underwoodi_LJAMMCNP_10923 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_underwoodi_LJAMMCNP_10931 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_whitii_LJAMMCNP_14387 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_whitii_LJAMMCNP_14388 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAGGTCTCCACCCACCAA Homonota_williamsii_LJAMMCNP_4467 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAAGTCTCCACCCACCAA Homonota_williamsii_LJAMMCNP_6517 CATAGTAAGTTTAATGAAACAAAACCAGTCATCAAGTCTCCACCCACCAA Homonota_andicola_LJAMMCNP_12490 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_andicola_LJAMMCNP_12495 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_borellii_LJAMMCNP_12116 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_borellii_LJAMMCNP_12125 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_darwinii_LJAMMCNP_11424 AACGAACATTAACCAGATCAATGACAAGTCTTGCTCAAAAACTTAGCGGA Homonota_darwinii_LJAMMCNP_9266 AACGAACATTAACCAGATCAATGACAAGTCTTGCTCAAAAACTTAGCGGA Homonota_spa_LJAMMCNP_10577 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_spa_LJAMMCNP_5047 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Garthia_gaudichaudi_IBEG1_1 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGTGGA Gymnodactylus_geckoides_LG_1050 AGCGAACATTAACAAGATCAATGACAAGCCTTGCTCAGAAACTTAGTGGA Gymnodactylus_geckoides_LG_911 AGCGAACATTAACAAGATCAATGACAAGCCTTGCTCAGAAACTTAGTGGA Phyllodactylus_kofordi_TG_266 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGTGGA Phyllopezus_przewalskii_LJAMMCNP_12089 AGCGAACATTAACTAGATCAATGACAAGTCTTGCTCAGAAACTCAGTGGA Phyllopezus_pollicaris_CHUNB_57388 AGCGAACATTAACTAGATCAATGACAAGTCTTGCTCAGAAACTCAGTGGA Homonota_rupicola_RUPI_1 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_rupicola_RUPI_2 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_spb_MNHNP_11409 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_taragui_LJAMMCNP_14419 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_taragui_LJAMMCNP_14420 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_uruguayensis_UFRGS_1568 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_uruguayensis_UFRGS_3929 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_underwoodi_LJAMMCNP_10923 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_underwoodi_LJAMMCNP_10931 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_whitii_LJAMMCNP_14387 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_whitii_LJAMMCNP_14388 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAGAAACTTAGCGGA Homonota_williamsii_LJAMMCNP_4467 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAAAAACTTAGCGGA Homonota_williamsii_LJAMMCNP_6517 AGCGAACATTAACCAGATCAATGACAAGTCTTGCTCAAAAACTTAGCGGA Homonota_andicola_LJAMMCNP_12490 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGATTGTT Homonota_andicola_LJAMMCNP_12495 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGATTGTT Homonota_borellii_LJAMMCNP_12116 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_borellii_LJAMMCNP_12125 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_darwinii_LJAMMCNP_11424 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_darwinii_LJAMMCNP_9266 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_spa_LJAMMCNP_10577 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_spa_LJAMMCNP_5047 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Garthia_gaudichaudi_IBEG1_1 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTCTGGACTGTT Gymnodactylus_geckoides_LG_1050 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTCTGGACTGTT Gymnodactylus_geckoides_LG_911 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTCTGGACTGTT Phyllodactylus_kofordi_TG_266 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTCTGGATTGTT Phyllopezus_przewalskii_LJAMMCNP_12089 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTATGGACTGTT Phyllopezus_pollicaris_CHUNB_57388 AAGAGAACTGCATTTGATCTGTCATTAGAGATGGAAGATTCTGGACTGTT Homonota_rupicola_RUPI_1 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_rupicola_RUPI_2 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_spb_MNHNP_11409 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_taragui_LJAMMCNP_14419 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_taragui_LJAMMCNP_14420 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_uruguayensis_UFRGS_1568 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_uruguayensis_UFRGS_3929 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_underwoodi_LJAMMCNP_10923 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_underwoodi_LJAMMCNP_10931 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_whitii_LJAMMCNP_14387 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGATTGTT Homonota_whitii_LJAMMCNP_14388 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGATTGTT Homonota_williamsii_LJAMMCNP_4467 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_williamsii_LJAMMCNP_6517 AAGAGAACTGCATTTGATTTGTCATTAGATATGGAAGATTCTGGACTGTT Homonota_andicola_LJAMMCNP_12490 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_andicola_LJAMMCNP_12495 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_borellii_LJAMMCNP_12116 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_borellii_LJAMMCNP_12125 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_darwinii_LJAMMCNP_11424 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_darwinii_LJAMMCNP_9266 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_spa_LJAMMCNP_10577 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_spa_LJAMMCNP_5047 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Garthia_gaudichaudi_IBEG1_1 TGAAGCAGCTCACACGTTATGTCCTACTTTACCTCAATACCACCCTCTTC Gymnodactylus_geckoides_LG_1050 TGAAGCAGCTCACACATTATGTCCGACTTTACCTCAATACCACCCTCTTC Gymnodactylus_geckoides_LG_911 TGAAGCAGCTCACACATTATGTCCGACTTTACCTCAATACCACCCTCTTC Phyllodactylus_kofordi_TG_266 TGAAGCAGCTCACACGTTATGTCCTACTTTACCTCAATACCACCCTCTTC Phyllopezus_przewalskii_LJAMMCNP_12089 TGAAGCAGCTCACACATTATGTCCTACTTTACCTCAATACCACCCTCTTC Phyllopezus_pollicaris_CHUNB_57388 TGAAGCAGCTCACACATTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_rupicola_RUPI_1 TGAAGCYGCTCACACGCTRTRTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_rupicola_RUPI_2 TGAAGCYGCTCACACGCTRTRTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_spb_MNHNP_11409 TGAAGCTGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_taragui_LJAMMCNP_14419 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_taragui_LJAMMCNP_14420 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAGTACCACCCTCTTC Homonota_uruguayensis_UFRGS_1568 TGAAGCCGCTCACACGCTATGTCCTACTTTGCCTCAATACCACCCTCTTC Homonota_uruguayensis_UFRGS_3929 TGAAGCCGCTCACACGCTATGTCCTACTTTGCCTCAATACCACCCTCTTC Homonota_underwoodi_LJAMMCNP_10923 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_underwoodi_LJAMMCNP_10931 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_whitii_LJAMMCNP_14387 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_whitii_LJAMMCNP_14388 TGAAGCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_williamsii_LJAMMCNP_4467 TGAATCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_williamsii_LJAMMCNP_6517 TGAATCCGCTCACACGCTATGTCCTACTTTACCTCAATACCACCCTCTTC Homonota_andicola_LJAMMCNP_12490 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_andicola_LJAMMCNP_12495 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_borellii_LJAMMCNP_12116 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_borellii_LJAMMCNP_12125 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_darwinii_LJAMMCNP_11424 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_darwinii_LJAMMCNP_9266 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_spa_LJAMMCNP_10577 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_spa_LJAMMCNP_5047 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Garthia_gaudichaudi_IBEG1_1 AGCTTTTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Gymnodactylus_geckoides_LG_1050 AGCTTCTGGAGCTTATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Gymnodactylus_geckoides_LG_911 AGCTTCTGGAGCTYATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Phyllodactylus_kofordi_TG_266 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Phyllopezus_przewalskii_LJAMMCNP_12089 AACTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCGATT Phyllopezus_pollicaris_CHUNB_57388 AACTTCTGGAACTCATGGATCTAGGAAAAGTACGAAGAGCAAAGGCGATT Homonota_rupicola_RUPI_1 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_rupicola_RUPI_2 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_spb_MNHNP_11409 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_taragui_LJAMMCNP_14419 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_taragui_LJAMMCNP_14420 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_uruguayensis_UFRGS_1568 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_uruguayensis_UFRGS_3929 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_underwoodi_LJAMMCNP_10923 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_underwoodi_LJAMMCNP_10931 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_whitii_LJAMMCNP_14387 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_whitii_LJAMMCNP_14388 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_williamsii_LJAMMCNP_4467 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_williamsii_LJAMMCNP_6517 AGCTTCTGGAACTCATGGATCTAGGAAAAGTACGTAGAGCAAAGGCCATT Homonota_andicola_LJAMMCNP_12490 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_andicola_LJAMMCNP_12495 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_borellii_LJAMMCNP_12116 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_borellii_LJAMMCNP_12125 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_darwinii_LJAMMCNP_11424 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_darwinii_LJAMMCNP_9266 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_spa_LJAMMCNP_10577 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_spa_LJAMMCNP_5047 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Garthia_gaudichaudi_IBEG1_1 CTGTCTCATCTTGTTAAGTGCATTGCTGGAGAAGTTATTGTCATAAGTGA Gymnodactylus_geckoides_LG_1050 CTGTCTCATCTTGTTAAATGCATTGCTGGAGAAGTTATTGTCATAAATGA Gymnodactylus_geckoides_LG_911 CTGTCTCATCTTGTTAAATGCATTGCTGGAGAAGTTATTGTCATAAATGA Phyllodactylus_kofordi_TG_266 CTGTCTCATCTTGTTAAGTGCATTGCTGGAGAAGTTATTGTCATAAATGA Phyllopezus_przewalskii_LJAMMCNP_12089 TTGTCTCATCTTGTTAAGTGCATTGCTGGAGAAATTATTGTCATAAATGA Phyllopezus_pollicaris_CHUNB_57388 CTGTCTCATCTTGTTAAGTGCATTGCTGGAGAAATTATTGTCATAAATGA Homonota_rupicola_RUPI_1 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_rupicola_RUPI_2 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_spb_MNHNP_11409 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_taragui_LJAMMCNP_14419 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_taragui_LJAMMCNP_14420 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_uruguayensis_UFRGS_1568 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_uruguayensis_UFRGS_3929 CTGTCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_underwoodi_LJAMMCNP_10923 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_underwoodi_LJAMMCNP_10931 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_whitii_LJAMMCNP_14387 CTATCTCATCTCGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_whitii_LJAMMCNP_14388 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_williamsii_LJAMMCNP_4467 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_williamsii_LJAMMCNP_6517 CTATCTCATCTTGTTAAGTGCATTGCTGGGGAAGTTATTGTCATAAATGA Homonota_andicola_LJAMMCNP_12490 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_andicola_LJAMMCNP_12495 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_borellii_LJAMMCNP_12116 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_borellii_LJAMMCNP_12125 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_darwinii_LJAMMCNP_11424 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_darwinii_LJAMMCNP_9266 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_spa_LJAMMCNP_10577 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_spa_LJAMMCNP_5047 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Garthia_gaudichaudi_IBEG1_1 ATCTGAACCCAGTCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Gymnodactylus_geckoides_LG_1050 ATCTGAACCTAACCACGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Gymnodactylus_geckoides_LG_911 ATCTGAACCTAACCACGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Phyllodactylus_kofordi_TG_266 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Phyllopezus_przewalskii_LJAMMCNP_12089 ATCTGAACCTAACCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Phyllopezus_pollicaris_CHUNB_57388 ATCTGAACCTAACCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_rupicola_RUPI_1 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_rupicola_RUPI_2 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_spb_MNHNP_11409 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_taragui_LJAMMCNP_14419 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_taragui_LJAMMCNP_14420 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_uruguayensis_UFRGS_1568 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_uruguayensis_UFRGS_3929 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_underwoodi_LJAMMCNP_10923 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_underwoodi_LJAMMCNP_10931 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_whitii_LJAMMCNP_14387 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_whitii_LJAMMCNP_14388 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_williamsii_LJAMMCNP_4467 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_williamsii_LJAMMCNP_6517 ATCTGAACCCAGCCATGAAAGGCGGCACCACTCTCTCTCAATTTGTGCCA Homonota_andicola_LJAMMCNP_12490 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_andicola_LJAMMCNP_12495 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_borellii_LJAMMCNP_12116 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGGCTTAGTGAA Homonota_borellii_LJAMMCNP_12125 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGGCTTAGTGAA Homonota_darwinii_LJAMMCNP_11424 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_darwinii_LJAMMCNP_9266 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_spa_LJAMMCNP_10577 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_spa_LJAMMCNP_5047 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Garthia_gaudichaudi_IBEG1_1 GTGGGAGCACTACACGGGACCCAAAAACATTCAGCCAACGCCTTAATGAA Gymnodactylus_geckoides_LG_1050 GTGGGAGCACTACACGGGACCCAAAGACATTCAGCCAACGCCTTGATGAA Gymnodactylus_geckoides_LG_911 GTGGGAGCACTACACGGGACCCAAAGACATTCAGCCAACGCCTTGATGAA Phyllodactylus_kofordi_TG_266 GTGGGAGCACTACACGGGACCCAAAGACTTTCAGCCAACGCCTTAATGAA Phyllopezus_przewalskii_LJAMMCNP_12089 GTGGGAGCACTACACGGGATCCAAAGACATTCAGCCAACGCCTTAATGAA Phyllopezus_pollicaris_CHUNB_57388 GTGGGAGCACTACACGGGATCCAAAGACATTCAGCCAACGCCTTAATGAA Homonota_rupicola_RUPI_1 GTGGGAGCACTACACGGGAYCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_rupicola_RUPI_2 GTGGGAGCACTACACGGGAYCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_spb_MNHNP_11409 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGTCTTAGTGAA Homonota_taragui_LJAMMCNP_14419 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCACCTTAGTGAA Homonota_taragui_LJAMMCNP_14420 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCACCTTAGTGAA Homonota_uruguayensis_UFRGS_1568 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_uruguayensis_UFRGS_3929 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_underwoodi_LJAMMCNP_10923 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_underwoodi_LJAMMCNP_10931 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_whitii_LJAMMCNP_14387 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_whitii_LJAMMCNP_14388 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_williamsii_LJAMMCNP_4467 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_williamsii_LJAMMCNP_6517 GTGGGAGCACTACACGGGACCCAAAGACATTTAGCCACCGCCTTAGTGAA Homonota_andicola_LJAMMCNP_12490 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_andicola_LJAMMCNP_12495 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_borellii_LJAMMCNP_12116 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_borellii_LJAMMCNP_12125 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_darwinii_LJAMMCNP_11424 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_darwinii_LJAMMCNP_9266 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_spa_LJAMMCNP_10577 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_spa_LJAMMCNP_5047 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Garthia_gaudichaudi_IBEG1_1 GTTTCAGACTATACAGAAATAGACTCTGTTCCACCACTTCCTTTATATGC Gymnodactylus_geckoides_LG_1050 GTTTCAGACTATACAGAAATAGACTCTGTTCCACCACTTCCTTTATATGC Gymnodactylus_geckoides_LG_911 GTTTCAGACTATACAGAAATAGACTCTGTTCCACCACTTCCTTTATATGC Phyllodactylus_kofordi_TG_266 GTTTCAGACTATACAGAAATAGACTCTATTCCACCACTTCCTTTATATGC Phyllopezus_przewalskii_LJAMMCNP_12089 GTTTCAGACTATACAGAAATAGACTCTGTTCCACCACTTCCTTTATATGC Phyllopezus_pollicaris_CHUNB_57388 GTTTCAGACTATACAGAAATAGACTCTGTTCCACCACTTCCTTTATATGC Homonota_rupicola_RUPI_1 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_rupicola_RUPI_2 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_spb_MNHNP_11409 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_taragui_LJAMMCNP_14419 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_taragui_LJAMMCNP_14420 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_uruguayensis_UFRGS_1568 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_uruguayensis_UFRGS_3929 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_underwoodi_LJAMMCNP_10923 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCATTATATGC Homonota_underwoodi_LJAMMCNP_10931 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCATTATATGC Homonota_whitii_LJAMMCNP_14387 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_whitii_LJAMMCNP_14388 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_williamsii_LJAMMCNP_4467 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_williamsii_LJAMMCNP_6517 ATTTCAGACTATACAGAAATTGACTCTATTCCACCACTTCCTTTATATGC Homonota_andicola_LJAMMCNP_12490 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_andicola_LJAMMCNP_12495 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_borellii_LJAMMCNP_12116 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACGGAGAAGTTGA Homonota_borellii_LJAMMCNP_12125 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACGGAGAAGTTGA Homonota_darwinii_LJAMMCNP_11424 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_darwinii_LJAMMCNP_9266 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_spa_LJAMMCNP_10577 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_spa_LJAMMCNP_5047 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Garthia_gaudichaudi_IBEG1_1 ATTGCTTGCTGCAGACGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Gymnodactylus_geckoides_LG_1050 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTTCAGAGAAGTTGA Gymnodactylus_geckoides_LG_911 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTTCAGAGAAGTTGA Phyllodactylus_kofordi_TG_266 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Phyllopezus_przewalskii_LJAMMCNP_12089 TTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTTCAGAGAAGTTGC Phyllopezus_pollicaris_CHUNB_57388 TTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTTCAGAGAAGTTGC Homonota_rupicola_RUPI_1 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTATGGAGAAGTTGA Homonota_rupicola_RUPI_2 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTATGGAGAAGTTGA Homonota_spb_MNHNP_11409 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_taragui_LJAMMCNP_14419 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACGGAGAAGTTGA Homonota_taragui_LJAMMCNP_14420 ATTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACGGAGAAGTTGA Homonota_uruguayensis_UFRGS_1568 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTATGGAGAAGTTGA Homonota_uruguayensis_UFRGS_3929 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTATGGAGAAGTTGA Homonota_underwoodi_LJAMMCNP_10923 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_underwoodi_LJAMMCNP_10931 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_whitii_LJAMMCNP_14387 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_whitii_LJAMMCNP_14388 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_williamsii_LJAMMCNP_4467 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_williamsii_LJAMMCNP_6517 GTTGCTTGCTGCAGATGAGGAATGTTCATATGCTTGTACAGAGAAGTTGA Homonota_andicola_LJAMMCNP_12490 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_andicola_LJAMMCNP_12495 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_borellii_LJAMMCNP_12116 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAGA-CTATGA Homonota_borellii_LJAMMCNP_12125 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAGA-CTATGA Homonota_darwinii_LJAMMCNP_11424 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_darwinii_LJAMMCNP_9266 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_spa_LJAMMCNP_10577 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_spa_LJAMMCNP_5047 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Garthia_gaudichaudi_IBEG1_1 ACAACCAAAGGAACATTAACAAACAAAATGTGCCAGATGAAAA-CTATGA Gymnodactylus_geckoides_LG_1050 ACAACCAAAGGAACATTAACAAACAAAATGTGCCAGATGAAAA-CTATGA Gymnodactylus_geckoides_LG_911 ACAACCAAAGGAACATTAACAAACAAAATGTGCCAGATGAAAA-CTATGA Phyllodactylus_kofordi_TG_266 ACAACCAAAGGAACATTAACAGACAAAATGTGCCGGTTGAAAA-CTATGA Phyllopezus_przewalskii_LJAMMCNP_12089 ACAGCCAAAGGAACATGAACAAACAAAATGTGCTGGATGAAAA-CTATGA Phyllopezus_pollicaris_CHUNB_57388 ACAGCCAAAGGAACATGAACAAACAAAATGTGCTGGATGAAAA-CTATGC Homonota_rupicola_RUPI_1 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAAACTATGA Homonota_rupicola_RUPI_2 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_spb_MNHNP_11409 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_taragui_LJAMMCNP_14419 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_taragui_LJAMMCNP_14420 ACAATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_uruguayensis_UFRGS_1568 ACAATCAGAGGAGCATCAATAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_uruguayensis_UFRGS_3929 ACAATCAAAGGAGCATCAATAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_underwoodi_LJAMMCNP_10923 ACCATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_underwoodi_LJAMMCNP_10931 ACCATCAAAGGAGCATCAACAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_whitii_LJAMMCNP_14387 ACAATCAAAGGAGCATCAGCAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_whitii_LJAMMCNP_14388 ACAATCAAAGGAGCATCAGCAGACAAAATGTGCCAGATGAAAA-CTATGA Homonota_williamsii_LJAMMCNP_4467 ACAATCAAAGGAGCATCAACAGACAAARTGTGCCAGATGAAAA-CTATGA Homonota_williamsii_LJAMMCNP_6517 ACAATCAAAGGAGCATCAACAGACAAARTGTGCCAGATGAAAA-CTATGA Homonota_andicola_LJAMMCNP_12490 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_andicola_LJAMMCNP_12495 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_borellii_LJAMMCNP_12116 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_borellii_LJAMMCNP_12125 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_darwinii_LJAMMCNP_11424 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_darwinii_LJAMMCNP_9266 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_spa_LJAMMCNP_10577 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTTTGTGTG Homonota_spa_LJAMMCNP_5047 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTTTGTGTG Garthia_gaudichaudi_IBEG1_1 AGATCTTTTTCAGAATTCCAGTCTTCGTACAGATGACTTCACTTTGAGTG Gymnodactylus_geckoides_LG_1050 AGATCTTTTTCAGAATTCCAGTCTTCGTACAGATGATCTCACTTTGTGTG Gymnodactylus_geckoides_LG_911 AGATCTTTTTCAGAATTCCAGTCTTCGTACAGATGAYCTCACTTTGTGTG Phyllodactylus_kofordi_TG_266 AGATCTTTTTCAGAATTCCAGTCTTTGTACAGATGACCTCACATTGTGTG Phyllopezus_przewalskii_LJAMMCNP_12089 AGATTTTTTTCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Phyllopezus_pollicaris_CHUNB_57388 AGATTTTTTTCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_rupicola_RUPI_1 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_rupicola_RUPI_2 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_spb_MNHNP_11409 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTTTGTGTG Homonota_taragui_LJAMMCNP_14419 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_taragui_LJAMMCNP_14420 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_uruguayensis_UFRGS_1568 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGCTCTGTGTG Homonota_uruguayensis_UFRGS_3929 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCGC???????? Homonota_underwoodi_LJAMMCNP_10923 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_underwoodi_LJAMMCNP_10931 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_whitii_LJAMMCNP_14387 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_whitii_LJAMMCNP_14388 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_williamsii_LJAMMCNP_4467 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_williamsii_LJAMMCNP_6517 ACATCTTTTCCAGAATTCCAGTCTTTGTACAGATGACCTCACTTTGTGTG Homonota_andicola_LJAMMCNP_12490 ATGTAGATGAAGAAGACAAAAAGCCAAACGTTATTGATCTTTCTCAGTAT Homonota_andicola_LJAMMCNP_12495 ATGTAGATGAAGAAGACAAAAAGCCAAACGTTATTGATCTTTCTCAGTAT Homonota_borellii_LJAMMCNP_12116 ATATGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_borellii_LJAMMCNP_12125 ATATGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_darwinii_LJAMMCNP_11424 ATGTAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_darwinii_LJAMMCNP_9266 ATGTAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_spa_LJAMMCNP_10577 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_spa_LJAMMCNP_5047 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Garthia_gaudichaudi_IBEG1_1 ACGTAGACGAAGAATACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Gymnodactylus_geckoides_LG_1050 ATGTAGACGAAGAAGACAAAAAGCCAGATGTTATTGATCTTTCTCAGTAT Gymnodactylus_geckoides_LG_911 ATGTAGACGAAGAAGACAAAAAGCCAGATGTTATTGATCTTTCTCAGTAT Phyllodactylus_kofordi_TG_266 ACATAGATGAAGAAGACAAAAAGCCAAATATTATTGATCTTTCTCAGTAT Phyllopezus_przewalskii_LJAMMCNP_12089 ACATAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Phyllopezus_pollicaris_CHUNB_57388 ACATAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_rupicola_RUPI_1 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_rupicola_RUPI_2 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_spb_MNHNP_11409 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_taragui_LJAMMCNP_14419 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_taragui_LJAMMCNP_14420 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_uruguayensis_UFRGS_1568 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_uruguayensis_UFRGS_3929 ?????????????????????????????????????????????????? Homonota_underwoodi_LJAMMCNP_10923 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_underwoodi_LJAMMCNP_10931 ACGTGGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_whitii_LJAMMCNP_14387 ATGTAGATGAAGAAGACAAAAAGCCAAACGTTATTGATCTTTCTCAGTAT Homonota_whitii_LJAMMCNP_14388 ATGTAGATGAAGAAGACAAAAAGCCAAACGTTATTGATCTTTCTCAGTAT Homonota_williamsii_LJAMMCNP_4467 ATGTAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_williamsii_LJAMMCNP_6517 ATRTAGATGAAGAAGACAAAAAGCCAAATGTTATTGATCTTTCTCAGTAT Homonota_andicola_LJAMMCNP_12490 AGCCCAACC Homonota_andicola_LJAMMCNP_12495 AGCCCAACC Homonota_borellii_LJAMMCNP_12116 AGCCCAACC Homonota_borellii_LJAMMCNP_12125 AGCCCAACC Homonota_darwinii_LJAMMCNP_11424 AGCCCAACC Homonota_darwinii_LJAMMCNP_9266 AGCCCAACC Homonota_spa_LJAMMCNP_10577 AGCCCAACC Homonota_spa_LJAMMCNP_5047 AGCCCAACC Garthia_gaudichaudi_IBEG1_1 AGTCCAACT Gymnodactylus_geckoides_LG_1050 AGTCCAACT Gymnodactylus_geckoides_LG_911 AGTCCAACT Phyllodactylus_kofordi_TG_266 AGCCCAGCT Phyllopezus_przewalskii_LJAMMCNP_12089 AGTCCAACT Phyllopezus_pollicaris_CHUNB_57388 AGTCCAACT Homonota_rupicola_RUPI_1 AGCCCAACC Homonota_rupicola_RUPI_2 AGCCCAACC Homonota_spb_MNHNP_11409 AGCCCAACC Homonota_taragui_LJAMMCNP_14419 AGCCCAACC Homonota_taragui_LJAMMCNP_14420 AGCCCAACC Homonota_uruguayensis_UFRGS_1568 AGCCCAACC Homonota_uruguayensis_UFRGS_3929 ????????? Homonota_underwoodi_LJAMMCNP_10923 AGCCCAACC Homonota_underwoodi_LJAMMCNP_10931 AGCCCAACC Homonota_whitii_LJAMMCNP_14387 AGCCCAACC Homonota_whitii_LJAMMCNP_14388 AGCCCAACC Homonota_williamsii_LJAMMCNP_4467 AGCCCAACC Homonota_williamsii_LJAMMCNP_6517 AGCCCAACC ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 959; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 959; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 959; END; BEGIN TREES; Title DMXL1_BI; ID 015b7b46199f3; LINK Taxa = DMXL1; TRANSLATE [0] 1 Homonota_andicola_LJAMMCNP_12490, [1] 2 Homonota_andicola_LJAMMCNP_12495, [2] 3 Homonota_borellii_LJAMMCNP_12116, [3] 4 Homonota_borellii_LJAMMCNP_12125, [4] 5 Homonota_darwinii_LJAMMCNP_11424, [5] 6 Homonota_darwinii_LJAMMCNP_9266, [6] 7 Homonota_spa_LJAMMCNP_10577, [7] 8 Homonota_spa_LJAMMCNP_5047, [8] 9 Garthia_gaudichaudi_IBEG1_1, [9] 10 Gymnodactylus_geckoides_LG_1050, [10] 11 Gymnodactylus_geckoides_LG_911, [11] 12 Phyllodactylus_kofordi_TG_266, [12] 13 Phyllopezus_przewalskii_LJAMMCNP_12089, [13] 14 Phyllopezus_pollicaris_CHUNB_57388, [14] 15 Homonota_rupicola_RUPI_1, [15] 16 Homonota_rupicola_RUPI_2, [16] 17 Homonota_spb_MNHNP_11409, [17] 18 Homonota_taragui_LJAMMCNP_14419, [18] 19 Homonota_taragui_LJAMMCNP_14420, [19] 20 Homonota_uruguayensis_UFRGS_1568, [20] 21 Homonota_uruguayensis_UFRGS_3929, [21] 22 Homonota_underwoodi_LJAMMCNP_10923, [22] 23 Homonota_underwoodi_LJAMMCNP_10931, [23] 24 Homonota_whitii_LJAMMCNP_14387, [24] 25 Homonota_whitii_LJAMMCNP_14388, [25] 26 Homonota_williamsii_LJAMMCNP_4467, [26] 27 Homonota_williamsii_LJAMMCNP_6517; TREE con_50_majrule = ((12:0.02811322,(9:0.02564722,((10:0.001595682,11:0.001422803):0.02907176,(13:0.009035525,14:0.007026569):0.03531765):0.01094795):0.01829104):0.027745345,(((1:0.001368584,2:0.001439856,(24:0.005139688,25:0.001355886):0.003313567):0.00896844,((5:0.0013397,6:0.001454384):0.00327346,(26:0.0014244,27:0.001346286):0.005123004):0.003335387):0.003559723,((22:0.001349591,23:0.001382208):0.007124303,((7:0.001429888,8:0.00138943,17:0.006965101):0.003350645,((20:0.005860017,21:0.001579013):0.008093509,((3:0.001406655,4:0.001386392):0.009036648,((15:0.001508915,16:0.001393767):0.007070731,(18:0.001386481,19:0.001392556):0.003387486):0.003274528):0.005216909):0.01086065):0.003316465):0.003443193):0.027745345); END; BEGIN TREES; Title DMXL1_ML; ID 015b7b82f3f927; LINK Taxa = DMXL1; TRANSLATE [0] n0 Homonota_andicola_LJAMMCNP_12490, [1] n1 Homonota_andicola_LJAMMCNP_12495, [2] n2 Homonota_borellii_LJAMMCNP_12116, [3] n3 Homonota_borellii_LJAMMCNP_12125, [4] n4 Homonota_darwinii_LJAMMCNP_11424, [5] n5 Homonota_darwinii_LJAMMCNP_9266, [6] n6 Homonota_spa_LJAMMCNP_10577, [7] n7 Homonota_spa_LJAMMCNP_5047, [8] n8 Garthia_gaudichaudi_IBEG1_1, [9] n9 Gymnodactylus_geckoides_LG_1050, [10] n10 Gymnodactylus_geckoides_LG_911, [11] n11 Phyllodactylus_kofordi_TG_266, [12] n12 Phyllopezus_przewalskii_LJAMMCNP_12089, [13] n13 Phyllopezus_pollicaris_CHUNB_57388, [14] n14 Homonota_rupicola_RUPI_1, [15] n15 Homonota_rupicola_RUPI_2, [16] n16 Homonota_spb_MNHNP_11409, [17] n17 Homonota_taragui_LJAMMCNP_14419, [18] n18 Homonota_taragui_LJAMMCNP_14420, [19] n19 Homonota_uruguayensis_UFRGS_1568, [20] n20 Homonota_uruguayensis_UFRGS_3929, [21] n21 Homonota_underwoodi_LJAMMCNP_10923, [22] n22 Homonota_underwoodi_LJAMMCNP_10931, [23] n23 Homonota_whitii_LJAMMCNP_14387, [24] n24 Homonota_whitii_LJAMMCNP_14388, [25] n25 Homonota_williamsii_LJAMMCNP_4467, [26] n26 Homonota_williamsii_LJAMMCNP_6517; TREE tree_1 = ((n8:0.014129965539882012,(((((n25:0.00000179859346870271,n26:0.00000179859346870271):0.0021024875131043725,(n5:0.00000179859346870271,n4:0.00000179859346870271):0.0010464724644652856):0.0010491842045534476,((n0:0.00000179859346870271,n1:0.00000179859346870271):0.00000179859346870271,(n23:0.0020901544089146746,n24:0.00000179859346870271):0.0010444136604157454):0.004218247363454784):0.0010459817043180176,((n21:0.00000179859346870271,n22:0.00000179859346870271):0.0031553621987896706,(((n20:0.00000179859346870271,n19:0.0025172502961587928):0.003792630775900029,((n2:0.00000179859346870271,n3:0.00000179859346870271):0.004212678183340194,((n15:0.00000179859346870271,n14:0.00000179859346870271):0.0031930292822590204,(n17:0.00000179859346870271,n18:0.00000179859346870271):0.0010564691168358394):0.0010386410522137918):0.0020843370772810708):0.00531570516469332,(n16:0.003140315908265903,(n7:0.00000179859346870271,n6:0.00000179859346870271):0.00000179859346870271):0.0010403813840033208):0.0010454190164484287):0.0010439369400166354):0.03170702284950613,n11:0.015462164885415752):0.009633579742997321):0.002693141547017453,((n12:0.004253842367312247,n13:0.0031813182687649203):0.019819408459473338,(n10:0.00000179859346870271,n9:0.00000179859346870271):0.016507605745464688):0.002693141547017453); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1493021799595; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1183784041447490739; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4838051644308343376; mqVersion 320; checksumv 0 3 1837767641 null getNumChars 959 numChars 959 getNumTaxa 27 numTaxa 27 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 580363.0 sumSquares -3.22818021289917E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1072 834; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #1183784041447490739 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #1183784041447490739; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 972 762; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.arrow; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1183784041447490739 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 015b7b46199f3; toggleUseWeights off; endTell; setAssignedID 1173.1492421851404.6025951605959229803; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 972 762; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #1183784041447490739 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 2; setTreeBlockID 015b7b82f3f927; toggleUseWeights off; endTell; setAssignedID 3414.1492425837690.806959390472365351; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 972 762; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4838051644308343376 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 972 762; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;