#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=58; TAXLABELS Colletotrichum_sp._PMPG21 Colletotrichum_sp._PMPG22 Colletotrichum_sp._PMPG16 Colletotrichum_sp._PMPG15 Colletotrichum_sp._PMPG13 Colletotrichum_sp._PMPG10 Colletotrichum_sp._PMPG4 Colletotrichum_sp._PMPG3 Colletotrichum_sp._PMPG2 Colletotrichum_sp._PMPG1 Colletotrichum_sp._PHT2 Colletotrichum_sp._PMPG14 Colletotrichum_sp._PMT2 Colletotrichum_sp._CMT4 Colletotrichum_sp._PMPG7 Colletotrichum_sp._PMPG8 'Colletotrichum truncatum Capsicum_frutescens_CBS_120709' Colletotrichum_sp._CMP6 Colletotrichum_sp._CMP7 Colletotrichum_sp._CMP9 Colletotrichum_sp._CMP10 Colletotrichum_sp._CMP11 'Colletotrichum truncatum CBS_15135' Colletotrichum_sp._CMK28 'Colletotrichum truncatum Capsicum_annuum_CBS_37167' Colletotrichum_sp._CMK1 Colletotrichum_sp._CHKH4 Colletotrichum_sp._CHKH3 Colletotrichum_sp._CHPG1 Colletotrichum_sp._PHK1 Colletotrichum_sp._PHK2 Colletotrichum_sp._CMK9 Colletotrichum_sp._CMK14 Colletotrichum_sp._CMP2 Colletotrichum_sp._PHPG14 Colletotrichum_sp._PHPG17 Colletotrichum_sp._PHL3 Colletotrichum_sp._PHPG8 Colletotrichum_sp._CMK15 Colletotrichum_sp._CMK31 Colletotrichum_sp._CMK10 Colletotrichum_sp._CMK12 Colletotrichum_sp._CMK18 Colletotrichum_sp._CMK7 Colletotrichum_sp._CMK5 Colletotrichum_sp._CMK4 Colletotrichum_sp._CMK3 Colletotrichum_sp._CMK2 Colletotrichum_sp._CHK1 Colletotrichum_sp._CHK2 Colletotrichum_sp._CHT1 Colletotrichum_sp._CHT2 Colletotrichum_sp._CMT1 Colletotrichum_sp._CMT2 Colletotrichum_sp._CMT3 Colletotrichum_sp._CMT5 Colletotrichum_sp._CMT7 'Colletotrichum curcumae IMI_288937' ; END; BEGIN CHARACTERS; TITLE Colletotrichum_truncatum_Multigene; DIMENSIONS NCHAR=100; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Colletotrichum_sp._PMPG21 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG22 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG16 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG15 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG13 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PMPG8 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum truncatum Capsicum_frutescens_CBS_120709' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP6 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP9 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP11 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum truncatum CBS_15135' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGATGAAGCTCTTCGCCC Colletotrichum_sp._CMK28 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum truncatum Capsicum_annuum_CBS_37167' TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHKH4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHKH3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHPG1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK9 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMP2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG14 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG17 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHL3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._PHPG8 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCAGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK15 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK31 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK10 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK12 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK18 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK5 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK4 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHK1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHK2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHT1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CHT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT1 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT2 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT3 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT5 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC Colletotrichum_sp._CMT7 TGAAATTCAACGAATGACACCACTAGATCACAATTATTGAGATTACCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC 'Colletotrichum curcumae IMI_288937' TGAAATTCAACGAATGACACCACTAGATCACAATTATTAAGATTTCCTAGGCTAGACACTCATGCTGCAGAGCTGCCTCGAAAGTTGAAGCTCTTCGCCC ; END; BEGIN TREES; Title Colletotrichum_truncatum_Multigene; LINK Taxa = Taxa; TRANSLATE [0] 1 Colletotrichum_sp._PMPG21, [1] 2 Colletotrichum_sp._PMPG22, [2] 3 Colletotrichum_sp._PMPG16, [3] 4 Colletotrichum_sp._PMPG15, [4] 5 Colletotrichum_sp._PMPG13, [5] 6 Colletotrichum_sp._PMPG10, [6] 7 Colletotrichum_sp._PMPG4, [7] 8 Colletotrichum_sp._PMPG3, [8] 9 Colletotrichum_sp._PMPG2, [9] 10 Colletotrichum_sp._PMPG1, [10] 11 Colletotrichum_sp._PHT2, [11] 12 Colletotrichum_sp._PMPG14, [12] 13 Colletotrichum_sp._PMT2, [13] 14 Colletotrichum_sp._CMT4, [14] 15 Colletotrichum_sp._PMPG7, [15] 16 Colletotrichum_sp._PMPG8, [16] 17 'Colletotrichum truncatum Capsicum_frutescens_CBS_120709', [17] 18 Colletotrichum_sp._CMP6, [18] 19 Colletotrichum_sp._CMP7, [19] 20 Colletotrichum_sp._CMP9, [20] 21 Colletotrichum_sp._CMP10, [21] 22 Colletotrichum_sp._CMP11, [22] 23 'Colletotrichum truncatum CBS_15135', [23] 24 Colletotrichum_sp._CMK28, [24] 25 'Colletotrichum truncatum Capsicum_annuum_CBS_37167', [25] 26 Colletotrichum_sp._CMK1, [26] 27 Colletotrichum_sp._CHKH4, [27] 28 Colletotrichum_sp._CHKH3, [28] 29 Colletotrichum_sp._CHPG1, [29] 30 Colletotrichum_sp._PHK1, [30] 31 Colletotrichum_sp._PHK2, [31] 32 Colletotrichum_sp._CMK9, [32] 33 Colletotrichum_sp._CMK14, [33] 34 Colletotrichum_sp._CMP2, [34] 35 Colletotrichum_sp._PHPG14, [35] 36 Colletotrichum_sp._PHPG17, [36] 37 Colletotrichum_sp._PHL3, [37] 38 Colletotrichum_sp._PHPG8, [38] 39 Colletotrichum_sp._CMK15, [39] 40 Colletotrichum_sp._CMK31, [40] 41 Colletotrichum_sp._CMK10, [41] 42 Colletotrichum_sp._CMK12, [42] 43 Colletotrichum_sp._CMK18, [43] 44 Colletotrichum_sp._CMK7, [44] 45 Colletotrichum_sp._CMK5, [45] 46 Colletotrichum_sp._CMK4, [46] 47 Colletotrichum_sp._CMK3, [47] 48 Colletotrichum_sp._CMK2, [48] 49 Colletotrichum_sp._CHK1, [49] 50 Colletotrichum_sp._CHK2, [50] 51 Colletotrichum_sp._CHT1, [51] 52 Colletotrichum_sp._CHT2, [52] 53 Colletotrichum_sp._CMT1, [53] 54 Colletotrichum_sp._CMT2, [54] 55 Colletotrichum_sp._CMT3, [55] 56 Colletotrichum_sp._CMT5, [56] 57 Colletotrichum_sp._CMT7, [57] 58 'Colletotrichum curcumae IMI_288937'; TREE tree_1 = (58:0.039579,(((41:0.0,(39:0.0,40:0.0):0.0):0.0,((48:0.0,(47:0.0,(46:0.0,(45:0.0,(44:0.0,(42:0.0,43:0.0):0.0):0.0):0.0):0.0):0.0):0.0,(49:0.0,(50:0.0,(51:0.0,(52:0.0,(53:0.0,(54:0.0,(55:0.0,(56:0.0,57:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.000994):0.00199,(((29:0.0,(28:0.0,(27:0.0,(26:0.0,(24:0.0,25:0.0):0.0):0.0):0.0):0.0):0.0,((30:0.0,31:0.0):0.000994,(32:0.0,(33:0.0,(34:0.0,(35:0.0,(36:0.0,(37:0.0,38:0.0):0.0):0.0):0.0):0.0):0.0):0.000994):0.0):0.000994,(23:0.001988,((17:0.000994,(18:0.0,(19:0.0,(20:0.0,(21:0.0,22:0.0):0.0):0.0):0.0):0.0):0.000994,((14:0.0,(15:0.0,16:0.0):0.0):0.0,((12:0.00199,13:0.0):0.0,(11:0.0,(10:0.0,(9:0.0,(8:0.0,(7:0.0,(6:0.0,(5:0.0,(4:0.0,(3:0.0,(1:0.0,2:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.000994):0.0):0.002984):0.0):0.0):0.039579)[% ] [% ] [% setBetweenBits = selected ]; END;