NEXUS [File created by TreeBASE: 1/16/09 15:37:47] [Matrix accession#: M4075] BEGIN TAXA; TITLE M4075; DIMENSIONS NTAX=83; TAXLABELS Coccidioides_posadasii_57 Colwellia_sp_66 Doohwaniella_chitinasigens_42 Drosophila_melanogaster_34 Entamobaea_dispar_24 Entamobaea_histolytica_25 Entamoeba_invadens_23 Enterobacter_sp_83 Glossina_morsitans_32 Grifola_umbellata_52 Halobacterium_sp_9 Helicoverpa_VIRUS_73 Homo_sapiens_37 Homo_sapiens_39 Hypocrea_rufa_59 Hypocrea_virens_55 Janthinobacterium_lividum_41 Kluyveromyces_lactis_28 Kurthia_zopfii_11 Listonella_anguillarum_70 Metarhizium_flavoviride_62 Microbulbifer_degradans_45 Momordica_charantia_16 Mus_musculus_38 Neurospora_crassa_27 Neurospora_crassa_56 Neurospora_crassa_58 Nicotiana_tabacum_17 Nostoc_punctiforme_22 Oceanobacillus_itheyensis_10 Orygia_VIRUS_75 Pantoea_agglomerans_80 Pichia_etchellsii_29 Pseudoalteromonas_sp_65 Rhizopus_microsporus_53 Sagittula_stellata_68 Salmonella_enterica_64 Schewanella_baltica_79 Serratia_marcescens_81 Sodalis_glossinidius_63 Spodoptera_VIRUS_74 Stenotrophomonas_maltophilia_43 Streptomyces_coelicolor_46 Streptomyces_coelicolor_49 Streptomyces_coelicolor_6 Streptomyces_lividans_48 Streptomyces_olivaceoviridis_7 Streptomyces_thermoviolaceus_47 Thermococcus_kodakaraensis_8 Trichoderma_harzianum_60 Ustilago_mayidis_51 Vibrio_cholerae_69 Aeromonas_punctata_78 Alteromonas_sp_4 Alteromonas_sp_67 Anopheles_gambiae_33 Aphanocladium_album_61 Arabidopsis_thaliana_18 Arabidopsis_thaliana_19 Arthrobacter_sp_3 Aspergillus_nidulans_26 Aspergillus_nidulans_54 Autographa_VIRUS_76 Bacillus_cereus_15 Bacillus_circulans_12 Bacillus_halodurans_13 Bacillus_thuringiensis_14 Betula_pendula_20 Betula_pendula_21 Bombyx_VIRUS_77 Bos_taurus_36 Bos_taurus_40 Brugia_malayi_31 Bufo_japonica_35 Burkholderia_cepacea_82 Caenorhabditis_elegans_30 Candida_albicans_50 Cellulomonas_uda_44 Clostridium_paraputrificum_2 Clostridium_thermocellum_1 Vibrio_parahaemolyticus_5 Vibrio_parahaemolyticus_71 Vibrio_vulnificus_72 ; END; BEGIN CHARACTERS; TITLE M4075; DIMENSIONS NCHAR=605; FORMAT DATATYPE = PROTEIN SYMBOLS = " 1 2 3 4 " MISSING = ? GAP = - ; MATRIX Coccidioides_posadasii_57 HNPQDLK----ADQFTHILYAFANIRP-S---GEVYLS------------------DTWADTDKHYPG------------------DKWD--EPGNNVY------------------GCIKQMYLLKK----NNR-NLKTLLSIGGW------------TY---SPNFKT-------------------PASTEEGRKKFADTSLKL-------MKDL---------GFDGIDID--WEYPEDE-----------------KQANDFVLLLKACRE-ALDAYSANHPNGKK----FLLTIASPA-GPQ----NYNK------LKLAEMDKYLDF-WNLMAYDFSGS-WDK----VSGHMSNVFPSTTKP----------------ESTPFS---------SDKA--VKDYIKAG-VPANKIVLGMPLYG-RAFASTDGIG-T------------S------FNGVG----------------GGS------------------------W-E-NG-------VWDYKDMPQQGAQV----------TELED------IAASYSYDKNKRYLISYD--TVKIAGKKAEYITKNGMGGGMWWESSSD Colwellia_sp_66 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GGW------------DL---SDPFYG-------------------FTEK-ANRDTFVASMKQF-------LKTWK--------FYDGVDID--WEFPGG--DGANPNL-----GNPATDGAAYVALMQELRA-MLNELEQES--GRT----YELTSAIGS-GYD----KIED------VDYAAASQYMDY-IFAMTYDFYGG-WNN----VTGHQTGVYCGSHLSTGECDGTGLDDNGEPRKGPAYT---------MDHA--AQLLLAQN-VSPSKIVLGAAMYG-RGWEGVLPANAT-DM-------DNP------MTAPG----------NG--KLTGSNAE-------------------GVW-E-AG-------VIDYKGVKANMIGASG--TGVNGFEVGYDE----QAQAAYVWNRTSGKLITYD--NPRSVKVKGQYVRQHNFAGLFGWEIDAD Doohwaniella_chitinasigens_42 TRVKQIETSGAASKLTFLNYAFGNIYQKNGGYECDIQYRTESG----N----GDGGDPFADYSKSFSADAS--VD-------G-VADKWD--S-------------------PLR--N-FGQIKRLK----ARHP-AISPMISLGGW------------SW---SKWFSA-------------------ASMTDPLRKQLVKSCVDLYIKQSAGMTAQV--VRPAAGVFDGIDID--WEFPGV--QGFGYN------TVSPADKQNFTLLLKEFRSQLDRCVTATT--GKR----YKLTVAIGA-GKD----KIDM------TEPAEYSKYLDW-INVMSYDFHGG-WDAKG--PTDFHSHLSNDPSSPNA-----------ATTLGASYN---------IEGA--VNNLLASG-TPAGKIVVGIPFYG-RGWTGVTNANNG--------------------LYQAA---------TA--PARGT------------------------Y-E-PG-------IEDYKVLKNAAGQ------------VYTHP----VTKQSWKFD--GNNFWSYD--TPANIQTKIDYVKAKTLGGMFSWSLDGD Drosophila_melanogaster_34 FGMEDID----PFLCTHLIYAFLGIEETG---QLRVIDA-------------------------------------------------YL--DLEENSG-----------------RGNIKSFNALK----LKNP-VLKTLVAVGGW------------NE---GSKR------------------FSLVARDPSKREKFVDDVVRF-------LQRHG---------FDGLDLD--WEYPG--QRHSLDN----------EDRSNYITFLKELKEGLEPFG-------------FILSAAVGSAQFS----AEIS------YDIPAMVPYLDL-INVMAYDLHGP-WDQ----VVGINAPLYAAEKDASDSS------------GRQQQL----------NVDAVVKYWLKAG-APAEKLILGVPFYG-RSFTLATAEGNQ------P---GAP------HIGKG---------------IAGNYS----------------------R-E-PG-------VLGYNELCEMMERE--------EWTQKWEA----TQQVPYAYR--QRQWVGYE--DPRSLALKAQYVMDNHLGGIMIWSLESD Entamobaea_dispar_24 YTTDNID----PTIVDVINYAFVVFDSTY---TVKEYE--------------------------------------------------WN--D-----------------------DQMIPKIVAMK----SRNP-NLKVLASIGGW------------NFNFYDSTKHL----------------YSQMAEKQATRATFIKSAMNF-------ARKYN---------LDGIDID--WEYPANEDQGGRP-----------VDTQSFTLLLKEFREAIDKEVGNG---KSK----LLLTIAAPAGPWN----IKN-------IEISKFYKYLDW-INLMTYDLHGS-WDS----VTGPHTALYATDG------------------IS--V-------------DDAVTAYLNAG-VPSAKIMLGMAHYG-RGWTLKSSSDHE------M---GSN------ATGAS---------------KSGTCT----------------------G-E-NG-------YLSKYEIDALIP----------QENIKFDS----KSKTMYGYK--NDQWFSFD--TQETFKYKADYLCKKKLGGVMFWSLDLD Entamobaea_histolytica_25 YTADNID----PTIVDVINYAFVVFDSTY---TLKEYE--------------------------------------------------WN--D-----------------------DQMIPKIVAMK----SRNP-NLKVLASIGGW------------NFNFYDSTKHL----------------YSQMAEKQATRATFIKSAMSF-------ARKYN---------LDGIDID--WEYPANEDQGGRP-----------VDTQSFTLLLKEFREAIDKEAGNG---KSK----LLLTIAAPAGPWN----IKN-------IEVSKFHQYIDW-INLMTYDLHGS-WDA----VTGSHTALYVTDG------------------IS--V-------------DDAVTAYLNAG-VPSTKIMLGMAHYG-RGWTLKSSSDHE------M---GSA------ATGAS---------------KSGTCT----------------------G-E-NG-------YLSKYEIDALIP----------QENIKFDS----KSKTMYGYK--NDQWFSFD--TKETFKYKADYLCKKKLGGVMFWSLDLD Entamoeba_invadens_23 YTPDNID----PTLVDVINYAFVVFDSSY---TVKEYE--------------------------------------------------WN--D-----------------------DQMIPKIVAMK----SKNP-NLQVLASIGGW------------NFNFYDSTKHL----------------FSEMAEKQTSRAAFIKSAMSF-------ARKYN---------LDGIDID--WEYPANKDQGGRP-----------VDVQSFTLLLKEFREAIDAEKLSGG--RSR----LLLTIAAPAGPKN----IEN-------LEISKFHKYLDW-INLMTYDLHGS-WDD----VTGSHTALYADDA------------------LS--V-------------DDAVKAYLSQG-VPPAKMFVGMAHYG-RGWTLKSANKHD------M---GSP------ASGAS---------------TSGKCT----------------------G-E-NG-------YLSKYEIDSLIP----------AANIQYDA----KSMTMFGYS--GDQWFSFD--DKDTFEHKVQYVCDHKLGGAMIWSLDLD Enterobacter_sp_83 FTVDKIP----AQNLTHLLYGFIPICGGNG-INDSLKEIE----------------GSFQALQRSCQGRED--FK-------VSIHDPFA--ALQKAQKGV---TAWD---DPYKG-N-FGQLMALK----QARP-DLKILPSIGGW------------TL---SDPFFF-------------------MGDK-VKRDRFVGSVKEF-------LQTWK--------FFDGVDID--WEFPGG--KGANPNL-----GSPQ-DGETYVLLMKELRA-MLDQLSAET--GRK----YELTSAISA-GKD----KIDK------VAYNVAQNSMDH-IFLMSYDFYGA-FDLK---NLGHQTALNAPAW-----------------KPDTAYT---------TVNG--VNALLAQG-VKPGKIVVGTAMYG-RGWTGVNGYQNN-----------IP------FTGTA----------TG--PVKGT------------------------W-E-NG-------IVDYRQIASQFMS--------GEWQYTYDA----TAEAPYVFKPSTGDLITFD--DARSVQAKGKYVLDKQLGGLFSWEIDAD Glossina_morsitans_32 FEPSNIN----PFLCTHLSYTFFGLSVQG---ELRVLDP-------------------------------------------------WL--DLDS--G-----------------LGNIKRTIALK----EFNP-KLKVIAAIGGW------------NE---GSIN------------------YSNMAADPNKREIFIKSVLQF-------LKAHQ---------FDGLDLD--WEYPA--QRGGAS-----------ADRVNFITLLKELQKSFAPYG-------------YELITAVAASEYS----AKIS------FNIPEMSKYVDY-INVMTYDFVTG-YDA----VLGFNAPLK-GQ-------------------G---AN----------NVEASIKYWLNQG-APASKLVLGLAMYG-HSFQLANPAQAT------A---GSP------SIGPG---------------KSGPYT----------------------I-Q-PG-------MLGYNEICETTTN----------WHYGWDD----RHGVPYKYK--NDQWIGYD--DERSIALKIDLLKSLNLAGAMLWSIEMD Grifola_umbellata_52 FPPSLIP----ADNLTHILYAFANVKSDT---GEVHLS------------------DPWADTDIHYPG------------------DSWN--DQGRNLY------------------GNSKAIYRLKQ----QHR-HLKVILSIGGW------------TY---SPNFHP-------------------VVVNPALRSKFVASSIWL-------LEDH---------GLDGLDVD--YEYPQND-----------------EQARGYVTLLRELRA-GLDAHASRKGANYN----FLLTIAAPC-GPD----NYQK------LHVREMDASLDF-WNMMAYDFAGS-WDK----VSGHQANVF----------------------GGPNKC---------FSSP--LIGTLAQG-VPRDKIVTGIPLYG-RSFMNTEGPG-T------------P------FKGLG----------------PGS------------------------W-E-QG-------VYD-RALPLPGSY------------VLQDD---KKLLASWTYDYEKKEMISFD--NEQVGHWKGEWIQREGLKGSMFWEASAE Halobacterium_sp_9 YFPGDIP----LDKVTHVNYAFLTVREDG---AVDYIQ--------------------ENAAMRVLEP------------------KSWH--DHT----------------------G-FDDLVD--------DP-ETSFLFSIGGW------------ND---STYFSN-------------------AAQSQASRERFADTAIEI-------MRTHN---------FDGLDID--WEYPGG---GGNSGN-----VVRDGDKQRYTELLQTVRE-KLDVAEDED--GKR----YQLTTALSA-DPE----KNTG------LDHAANAEALDF-LNVMTYDYHGA-FND----YTNHQAPLYGTEADP--------------SPNADEFY---------VDAS--MSFWLDTA-FDPAQLSLGLPFYG-RSFGNVASSDNN--------GLYQP------FDGTP----------------DGT------------------------WGQDNG-------IKEYWDITQNLAPS-------SDYETFWDD----TAKVPWLYSPSKNVLVSYD--SPRSVEAKTAYAAQHDIGGMMFWTFSGD Helicoverpa_VIRUS_73 FPVDKVP----TPNLSHILYGFIPICGGDG-INDSLKSIT----------------GSFEALQRSCAGRDN--FK-------VSIHDPWA--ALQKPQTGV---SAWN---EPYKG-N-FGQLMAAK----LANP-NLKVLASIGGW------------TL---SDPFYH-------------------MHDA-RTRQIFVESVREF-------VLTWK--------FFDGIDID--WEFPGG--KGANPNV-----GDVERDNNTYIALLGELRA-MLDQVQIQT--NRT----LELTTAISA-GID----KIAA------VNYDRAQQYLDK-IFVMSYDFKGA-WSNT---DLGHQTALYGSAW-----------------KPNEPYT---------ANVA--VDALLAQR-VNPKKLVLGVAMYG-RGWTGVHNYNSD-----------NP------FSGVA----------VG--PITGT------------------------W-E-NG-------VVDYRQIAKNIS----------RYEYAFDD----VAKAAYVFDRASGDLISYD--SERSVLAKGEYVLQRRLGGLFAWEIDAD Homo_sapiens_37 ILPHDLD----PFLCTHLIFAFASMNNN----QIVAKD--------------------------------------------------LQ--DE----------------------KILYPEFNKLK----ERNR-ELKTLLSIGGW------------NF---GTSR------------------FTTMLSTFANREKFIASVISL-------LRTHD---------FDGLDLF--FLYPG--LRGSPM-----------HDRWTFLFLIEELLFAFRKEALLTM--RPR----LLLSAAVSGVPHI----VQTS------YDVRFLGRLLDF-INVLSYDLHGS-WER----FTGHNSPLFSLPEDP----------------KSSAY---------------AMNYWRKLG-APSEKLIMGIPTYG-RTFRLLKASKNG------L---QAR------AIGPA---------------SPGKYT----------------------K-Q-EG-------FLAYFEICSFVW----------GAKKHWID----YQYVPYANK--GKEWVGYD--NAISFSYKAWFIRREHFGGAMVWTLDMD Homo_sapiens_39 FMPDNID----PCLCTHLIYAFAGRQNN----EITTIE--------------------------------------------------WN--D-----------------------VTLYQAFNGLK----NKNS-QLKTLLAIGGW------------NF---GTAP------------------FTAMVSTPENRQTFITSVIKF-------LRQYE---------FDGLDFD--WEYPG--SRGSPP-----------QDKHLFTVLVQEMREAFEQEAKQIN--KPR----LMVTAAVAAGISN----IQSG------YEIPQLSQYLDY-IHVMTYDLHGS-WEG----YTGENSPLYKYPTDT----------------GSNAYL----------NVDYVMNYWKDNG-APAEKLIVGFPTYG-HNFILSNPSNTG------I---GAP------TSGAG---------------PAGPYA----------------------K-E-SG-------IWAYYEICTFLKN---------GATQGWDA----PQEVPYAYQ--GNVWVGYD--NIKSFDIKAQWLKHNKFGGAMVWAIDLD Hypocrea_rufa_59 FQPQNLV----ASDITHVIYSFMNFQA-D---GTVVSG------------------DAYADYQKHYDD------------------DSWN--DVGNNAY------------------GCVKQLFKLKK----ANR-NLKVMLSIGGW------------TW---STNFPS-------------------AASTDANRKNFAKTAITF-------MKDW---------GFDGIDVD--WEYPADD-----------------TQASNMVLLLKEIRS-QLDAYAAQYASGYH----FLLSIAAPA-GPE----HYSF------LHMSDLGQVLDY-VNLMAYDYAGS-WST----YSGHDANLFVNPSNP----------------NSSPYN---------TDQA--IKAYINGG-VPSSKIVLGMPIYG-RSF?STGGIG-Q------------T------YSGIG----------------SGS------------------------W-E-NG-------IWDYKVLPKAGAT------------VQYDS----VAQAYYSYDPSSKELISYD--TPDMINKKVSYLKNLGLGGSMFWEASAD Hypocrea_virens_55 HRPQDLP----VDKLTHVLYAFANVRQDS---GEVHMT------------------DGWADTDIHWEG------------------DSWN--DTGNNMY------------------GCLKQLNLLKK----RNR-NLKVLLSIGGW------------TY---SGNFKG-------------------PASTQQGRETFAKSSLEL-------LKNL---------GFDGLDID--WEYPQNA-----------------DEARNFVELLATVRR-ELDAYSATLQNYSH----FELTVACPA-GPT----HFQK------LDVPGMDQYLDF-WNLMAYDYAGS-WDQ----TSGHQANLHPSHDNP----------------TSTPFS---------TDAA--IDFYTRNG-VAPSKIVLGMPIYG-RAFENTDGPG-R------------P------YNGIG----------------EGS------------------------W-E-NG-------IFDYKVLPLQGSQ------------EIYDQ----ATGSSYCYNPQTRKLVSYD--TPHASRVKAGYIKEWGLGGGMWWESSGD Janthinobacterium_lividum_41 YEVANVHTSGVADKLTFINYAFGNIYPKNGGYECGMINKAEPGATNPNSPDTGTGGDAEADYIR--TPKRT--VD-------G-QVIPWD--A-------------------PLSG-N-FLQLKKLK----AAHP-NLKLFISLGGW------------SW---SKNFSV-------------------GSATDALRKQMVRSCIDIYIKGNLPVQGGRGGVGAAANIFDGIDID--WEYPVG--GGQPYN------TVSPNDKRNFTLLMAEFRSQLD-ALGAAN--GKR----YLLTAAVGA-GKD----KIDN------TEPALYSQYMDW-INLMTYDFHGG-WETS----TNFNAQLFADPADP-------------STGMAREYV---------GDKA--VQYMIAAG-VPRDKLLLGIPFYG-RGWTGVAPGPNGD------------------GLYQAA---------TG--TAPGT------------------------Y-E-SG-------IEDYKILVAKAGT------------RYYHP----VTKQLYLYTGAGGQWWSYD--DPTVIGTKVKYVKDQGLRGAFSWELDGD Kluyveromyces_lactis_28 MDPKNIP----NGPYDILHYAFVNIN-SD---FSIDD-------------------------------------------------SAFS--KSA------------------------FLKVTSS------------KKIPSFGGW------------DFSTSP-STYT---------------IFRNAVKTDQNRNTFANNLINF-------MNKYN---------LDGIDLD--WEYPGAPDIPDIPADD-------SSSGSNYLTFLKLLKG-KMPSG-------------KTLSIAIPSSYWY-----LKN------FPISDIQNTVDY-MVYMTYDIHGI-WEYGK---ANSYINCHTPRK------------------EIEDA----------------IKMLDKAG-VKFNKVFGGVANYG-RSYKMVNTNCY------------NY------GCGFQR--------------EGGN-------------------SRDMTN-T-PG-------VLSDSEIIDIDSSD--------K-KNDR??????????????????????????????????????????????????????? Kurthia_zopfii_11 YNVTDID----PTKVTHINYAFADICWNG---VHGNP--D---------------PSGPNPVTWTCQNEKSQTIN--VPNGTIVLGDPWI--DTGKTFA----GDTWD---QPIA--GNINQLNKLK----QINP-NLKTIISVGGW------------TW---SN-RFS------------------DVAATAATREVFANSAVDF-------LRKYN---------FDGVDLD--WEYPVS---GGLD-----GNSKRSGDKQNYTLLLSKIRE-KLDAAGAVD--GKK----YLLTIASGASTTY-----AAN------TELANIASIVDW-INIMTYDFNGA-WQK----VSAHNALLNYDPAAS-------------AAGVPDANT---------FNVAAGAQGHLNAG-VPAAKLVLGVPFYG-RGWDGCAQAGNGQY--------QTC------TGG----------------SSVGTWEA----------GS-------------FD-------FYDLETNYIN----------KNGYTRYWND----TAKVPYLYNASNKRFISYD--DAESIGYKTAYIKSKGLGGAMFWELSGD Listonella_anguillarum_70 YTVDNIP----ADNLTHILYGFIPICGP----NESLKSVG---------------GNSYNALMTACNGVND--YE-------GVS-DPWP--AYQRVFPQG--GHQYS---SPIKG-N-YAMLLALK----RCNP-DLKILPSIGGW------------TL---SDPFFD-------------------FTNK-ANRDTFVASVKKF-------LTTWK--------FYHGVDEL--WEFPGG--GGQAGS------GDPVNDGPAYIALMRELLAPMLDELQSET--GRT----YELTSAIGV-GHD----KIED------VNFMRSIQYMDY-ILAMTYDFYGW-WNN----VLGHQTRLYCGSFMRPGQCDGKGVDENGEPYKGPAYT---------ADNG--IQLLLAQG-VPANKLVLVAAMYG-RGWEGVMPALHKVIP-------TDP------MTGVG----------NG--KLKGTSAQ-------------------GVW-E-AG-------VIDYKGIKSFMLGANN--TGINGFEYGYDA----QAEAPWVWNRTTGQLVTFD--DNRSIKRKGAYARNLGLAGLFSWEIDAD Metarhizium_flavoviride_62 YQPADLP----ASQISHVLYSFLNLSA-N---GTVYSG------------------DTWADIDKHYPN------------------DSWN--DVGNNVY------------------GCAKQLFLLKK----ANR-KMKTMLSIGGW------------TW---STNFPA-------------------AASTAATRSNFAKSAVTI-------MKDW---------GFDGIDVD--WEYPADD-----------------TQATNMVLLLQAVRD-ELDAYAAKFAPGYH----FQLSIAAPA-GAT----NYNK------LHLADLGKVLDY-INLMAYDFSGS-WSN----SSAHNANLYANPSNL----------------NATPFN---------TDDA--VNDYIKGG-VPASKIVLGMPIYG-KSFQKTNGIG-K------------P------FSGIG----------------DGS------------------------W-E-NG-------VWDYKVLPKAGAR------------VIYDD----VAKGYYSYDNRTQELISYD--TPDITKEKVTYLKSKGLGGSMFWEASAD Microbulbifer_degradans_45 YHVKNIHTSGSADKLTHIVYAFGNV--QNG--ECKI-------------------GDSYAAYDKAYSAADS--VD-------G-VADTWD--DG------------------VLRG-N-FGQLRRLK----AMHP-QIKIVWSFGGW------------TW---SGGFGE-------------------AAAN---ADHFANSCYDL-------VFDAR-----WADVFDGIDID--WEYPND--CG--LS------CDN-SGYDGYRVLMQALRNRFG-----------N----KLVTAAIGA-GES----KQNA------ADYGGAAQYLDF-YMLMTYDFFGA-FNPQG--PTAPHSPLYNYPGMP-----------------IEGFS---------SDHG--IQVLKSKG-VPAEKILLGIGFYG-RGWTNVTQDAPG----------------------GSA---------NG--AAPGT------------------------Y-E-KG-------IEDYKVLKNTCP--------------ATGT----IAGTAYAKC--GSNWWGYD--TPATIDSKMDYAKQQGLGGAFFWELSGD Momordica_charantia_16 LPASNID----ATLYTHLFCGYGEIDATSH--EVTIPS---------------------------------------------------T--EVS----------------------H-FSEKVKVS------NP-SVKTLLSIRG-------------D----SKVFSD-------------------IAKVPTARDTFVNSSIKA-------AVDCG---------FDGLDLQ--WLYPSS------P-----------TDMQNFKTLIVKWRQAAVDDARNNN--RPE----RILVASVPNLPYI----EKNVE-----YPGEAIKQNLDW-VNLVCYDFYTPAEGSSPD-YTGPSSALFNR--------------------RSNSLS---------AHFG--IESWTKYV--PAKKIVFGIPFHG-WAWTLANAAEHD-------------------MFSKA----------------TGSCV----------------------W-P-----------MDYSEVKSHRRAR------QCEYNIPNDP----RFGIAYAYV--ETTWIGYE--SESTIPVKIKFAKQNQLLGYFAWNISGD Mus_musculus_38 FKPDDIN----PCLCTHLIYAFAGMQNN----EITTIE--------------------------------------------------WN--D-----------------------VTLYKAFNDLK----NRNS-KLKTLLAIGGW------------NF---GTAP------------------FTTMVSTSQNRQTFITSVIKF-------LRQYG---------FDGLDLD--WEYPG--SRGSPP-----------QDKHLFTVLVKEMREAFEQEAIESN--RPR----LMVTAAVAGGISN----IQAG------YEIPELSKYLDF-IHVMTYDLHGS-WEG----YTGENSPLYKYPTET----------------GSNAYL----------NVDYVMNYWKNNG-APAEKLIVGFPEYG-HTFILRNPSDNG------I---GAP------TSGDG---------------PAGAYT----------------------R-Q-AG-------FWAYYEICTFLRS---------GATEVWDA----SQEVPYAYK--ANEWLGYD--NIKSFSVKAQWLKQNNFGGAMIWAIDLD Neurospora_crassa_27 MLPEQIP----YGYYTDIIFSFATIDPNS---FEIKPG------------------------------------------------DSKT--ADY------------------------MQRISAIK----LIQP-DIRIWIAVGGW------------AFNDPG-PTQT---------------TFSDIAASSANTEKFIDSLVKL-------MNKYG---------FDGIDID--WEYPVAEDRSGRGAD-----------YKNFVTFQKALYD-RMKGGG------LK----KQVSLTLPASYWY-----LQH------FDIVNLEKYVDW-FNVMSYDMHGS-WDIDNK-WTGPYANSHSNMT------------------EIQQA----------------LDLLWRNN-IKPAKVTFGMAFYS-RSFALTSPSCN------------TP------GCPIS---------------SGGN-------------------AGKCSG-T-TG-------VLLHAEIQDEISAR--------K-LTPTLH----REAAVKSVSWG-DQWVTFD--DAATWRLKANIIRGQCIPGVMVWAMSQD Neurospora_crassa_56 HRPQDLP----AEKLTHILYAFANVRPDS---GEVYLT------------------DQWADTDIHWEG------------------DSWN--DSGTNLY------------------GCLKQLNLLKR----RNR-NLKVLLSIGGW------------TY---SSNFKE-------------------PASKEEGRRRFAESAVEL-------VKNL---------GFDGLDID--WEYPQNA-----------------QEASDFVSLLSACRS-ALDAYASTVPGNPH----FEMSVACPA-GPQ----NYEK------MDLPGMDRYLDF-WNLMAYDYAGS-WDQ----VAGHQANLFHCNSNP----------------AATPFS---------TQRA--VEYYLSTG-VAADKIVLGMPLYG-RAFQGTEGLG-Q------------P------YSGVG----------------EGT------------------------W-E-NG-------VHDYKKLPLEGAE------------ERVDY----ESGATYCYHPGTKTLVSYD--TPGMARMKAEYIRERGLGGAMWWESSAD Neurospora_crassa_58 FQPQQLP----ASQITHVLYSFADIKP-D---GQVVSS------------------DTYADLEKRYPG------------------DSWS--EPGENAY------------------GCVKQMYLLKK----RNR-NMKVLLSIGGW------------TY---SPKFPP-------------------VAATEEGRRRFASSAVKL-------VQDW---------GFDGLDID--WEYPTNA-----------------REAQDFVLLLRACRQ-ALDDYARQYAPGYH----FLITIAAPA-GPQ----HYGV------MDLPGMNPYIDS-WHLMAYDYAGS-WDS----TTGHQANLLPSPKNL----------------LTTRFN---------TDQA--VRDFVRRG-IPANKIVLGLPLYG-RSFEGTDGLG-K------------P------YSGIG----------------AGT------------------------L-E-PG-------TWVYRDLPRPGAK------------EEYDN----LAKATYSYDALSRELITYDNVLSALVKTKYIFLR--GLGGAVFWEASGD Nicotiana_tabacum_17 ALN-NID--STLF--THLFCAFADLNPQSN--QLIISP------------------------------------------------ENQD--SFS-Q----------------------FTSTVQRK------NP-SVKTFLSIAGG------------RA---DTTAYG------------------IMARQPNSRKSFIDSSIRL-------ARQFG---------FHGLDLD--WEYPL-----------------SATDMTNLGILLNEWRTAINM----EARNSGRAA--LLLTAAVS-YSPRVN--G-LN------YPVESVARNLNW-INLMAYDFYGPNWSPS---QTNSHAQLFDPVN------------------HISGSD------------G--INAWIQAG-VPTKKLVLGIPFYG-YAWRLVNPNIH---------DLRAP------AAGKSNVG----------AVDDGSMT----------------------Y-N-R---------IRDYIVQSRATT-------------VYNA----TIVGDYCYSGS--NWISYDD-TQSVRNKV-NYVKGRGLLGYFAWHVAGD Nostoc_punctiforme_22 FLPAQID----PSLYTHINFAFGIFGYIT---KGIAPN--------------------NPRLTGDYRIQP----------------IEWN--D-QT---------------------VLYPEIQKLK----LKNP-NLKTLLSIGGWGFNDPQDPIQIGTY---TYNLFS------------------QMAASAAGRQQFIYSALEY-------AQKYK---------FDGIDLD--WEYPGYQGRGGRP-----------EDFANFLALVREFRT-AIS--------GRN----FLLTIASSAIVPSGVPDQYRSNPGSYFQWLAQCAQYLDW-LNVMSYDYHGAFPDDK---VTGMNAPLPQDST------------------PKGPFS---------VKNT--IEAYLAAG-IPNSKIVMGIPTYG-RTFKVSSPLSLTD---------NGPGKS---YSSVG---------------PAGIS-----------------------TVT-PG-------VLSYYEIQNRISS--------GSLTRRWHE----PTLTPYAYNSQTSEWVSYD--DTESIGYKTSYLIEKKLGGAMIWAIGLD Oceanobacillus_itheyensis_10 ?PPQNLD----ANKLTHINYAFADVCWEG---MHGNPD-----------------------NEEIPEGE----------------VKTWPCRDLQGNEADIE--NGSIVLYDYETDLVELPKLKALK----KQNE-NLKTLISIGGW------------TL---SNNLSL-------------------VASTEETRENFAESAVEF-------VREFK---------LDGLDLD--WEYPVA---GGMPNN-----ERDPSDKENHTLLLQEVRD-AFDEAEQED--NKE----YLVTIAGSATWAY-----ADN------NELGAISEIVDY-MAIMAYDINGT-WSE----ITGHNAPLYYSQLEA----------------DVRGWS---------FGVD--STPNVYSA-VPKDKLLLGLPFYG-HSWAGCNADNDG--K-------MVV------ENGAYQ---------T---CAPGWQQP----------G----------V-E-GG-------TVNYNVVKSLINQ--------DGYNYFFDN----EAKVPYLYNEQKGEFISYD--NVESLGYKVNFIEEQGLGGAMIWDLAGD Orygia_VIRUS_75 FPVDKVP----LPNLSHLLYGFIPICGGDG-LNDALKTIP----------------GSFEALQRSCKGRAD--FK-------VAIHDPWA--AIQKPQKGV---SAWN---EPYKG-N-FGQLMAAK----LANP-HLKILPSIGGW------------TL---SDPFYF-------------------MHDA-DKRRVFVESVKEF-------LQVWK--------FFDGVDID--WEFPGG--KGANPAL-----GNGERDADTYLVLLKELRA-MLDELQLQT--NKT----YELTSAISS-GYD----KIAV------VKYDAAQRFLDK-IFLMSYDFKGA-WSNT---DLGYQTTLYAPSW-----------------NANELYT---------TDHA--VKLLTGQG-VAAHKLIVGVAMYG-RGWTGVSGYAGD-----------KY------FSGTA----------DG--PVPGT------------------------W-E-NG-------VVDYRQINNELS----------KYIYRFDA----AAKAAYVFNKERGDLISFD--SVDSVLAKNVYVQQNGLGGLFAWEIDAD Pantoea_agglomerans_80 FTVDKIP----AQNLTHLLYGFIPVCGGDG-INDSLKGVE----------------GSFQALQRSCQGRED--FK-------VSIHDPFA--AVQKGQKGV---TAWD---DPYKG-N-FGQLMALK----QARP-DLKILPSIGGW------------TL---SDPFFF-------------------MGDK-VKRDRFVGSVKEF-------LQTWK--------FFDGVDID--WEFPGG--GGANPKL-----GNAQ-DGATYVQLMKDLRA-MLDQLSAET--GRK----YELTSAISA-GKD----KIDK------VDYNTAQNSMDH-IFLMSYDFYGA-FDLK---NLGHQTALKA--------------------RPGNRHG---------LYHGERRQCVAGQG-VKPGKIVVGAAKYG-RGWTGVSGYQNN-----------NP------FTGTA----------TG--PVKGT------------------------W-E-NG-------IVDYRQIANEFIS--------DEWQYSYDA----TAEAPYVFKPSTGDLITFD--DPRSVQAKGKYVLDKQLGGLFSWEIDAD Pichia_etchellsii_29 MDPLTI-----NG-YDIVHYSFAIIN-SD---LSISVG------------------------------------------------SGFD--D--------------------------FLKITS-------------KKIIAFGGW------------DFSTNP-NTYN---------------ILREVV-SDSKINTFANNVINF-------INEYN---------LDGVNFD--WEYPGAPDIPGIPAGD-------KKDGKRYSDLIGLIKQ-GIGS--------------KLVSVALPAAYWY-----LKA------FPLTDMDKHMDY-FIIMNYDYYGQ-WDYN----TDTGIGCHVDKR------------------NTTDI----------------IKMITKSG-IDTTKVYGGVANYA-RTYKLKDNNCN------------KY------GCDFTG--------------PESNAI-----------------TGDITR-T-PG-------IMTENELLAIDKST--------R-TRWSDT----D------SHCD---IMTYE--DNTNW---AAWMKSSERTNLINWYKDIG Pseudoalteromonas_sp_65 FDVTKVP----GQNLTHILYGFIPICGA----NESLKEIEN--------------GNSWRALQKACGDSQD--YE-------VVIHDPWA--AIQKSLPGV----DAK---DPIRG-T-YSQLMALK----QRYP-DLKILPSVGGW------------TL---SDPFHG-------------------FTEK-ANRDVFVASMKDF-------LKTWK--------FYDGVDID--WEFPGG--GGPNPNL-----GDPAKDGQAYIDLMRELRA-MLDELEAEI--GKP----YQLTSAIGM-GYD----KIED------VNYPQAAQYMDY-IFAMTYDFYGG-WNN----VTGHQTALYCGSHMSTDECNGTGLDDKGEPRKGPAYT---------TDNG--IQLLLQQG-LDPAKIVLGTAMYG-RGWEGVTPANTT-DG-------ANP------MTAPG----------NG--KLTGTTAQ-------------------GVW-E-AG-------VIDYKGIKAHMIGAAE--TGINGFEVGYDE----VAEGAYVWNKSNGKLITYD--SPRSVKAKGQYVRNLGLAGLFAWEIDAD Rhizopus_microsporus_53 YNVVDVAT--QANKLTHILYAFANVQPD----GQVVLG------------------DAYADIEKHFPANQAVNRKE----------DGWN--DPGKNLY------------------GNFKQFYLLKQ----QHR-HLKVSLSIGGY------------TW---STHFGP-------------------VARDPQKRRLFVDSSIKH-------LANL---------GLDGLDID--WEYPKDD-----------------EEAFYYVHLLYELRL-ALDRYQQQCQQLIQSR--LLLTVAVPC-GPD----HYRK------LRLTEMQPYVDL-FYLMAYDYAGS-WDS----FADHQAAVY-----------------------GGRLN---------TEQA--VQHYIACG-IPPYKLVVGMPLYG-RGFCNTAGPG-H------------P------FQGLP----------------RGT------------------------W-E-EG-------QFNYKTLPKPGAV------------EYHD----FNRLASWSYDPQAREFITYD--TPQMVAAKCNYIQQRRLGGAMFWELSAD Sagittula_stellata_68 ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????VGGW------------TL---SDPFYD-------------------FGVK-ANRDVFVASVKNF-------LQTWK--------FYDGVDID--WEYPGG--QGANPNL-----GDPSKDGDTYAILMAELRT-MLDGLSAET--GRT----YELTSAVGV-GYD----KIED------VNYADAVPHMDY-IFAMTYDYYGG-WNN----VVGHQAALNCGSHMSADECAGKGLDDEGKPRKGPAYT---------TANG--IDLLMAKG-VPANKLVVGAAMYG-RGWTGVTEASMS-DP-------TNP------MTGVG----------NG--KIAGS------------------------W-E-AG-------VIDYKDVVTQYENKA-------GVVVGYDE----VAEAPWAWDPSNGDLVTYD--NKRSVMAKGAYVRSLGLAGLFAWEIDAD Salmonella_enterica_64 ?RKIDK------EDRDVVAEAAALCGKVK---YEPTFL------------------DPWGDFQSYINLGFET--------------SGWD--VDPKTV------------T-QANAKGMLGALRDMQAKAKAAGH-TLALSMSIGGW------------SM---SNGFHE-------------------TAASDSSRKTFAKGVVKL-------FKQFP--------MFSEVDID--WEYPNDEGAGNPFGA---------EDGANYALLIAELRK-QLDSAGLSN---------VKISIAASA-VTT----IFDH------AKVKDLLAAGLYGINLMTYDFFGTPWAE----TLGHHTNRKA----L----------------EEGGWA---------VETI--VDHLLAEG-FSADRINIGYAGYT-RNARQVEIESLS------------P------LKGSYNP---------GSGDTTGS------------------------F-E-SGTSEWYDVIYSYLDLENQKGRNGF--------NVYTDQ----VADADYLYSPESKLFLSLD--TPRTVKAKGEYAAKLGLGGVFTWTIDQD Schewanella_baltica_79 ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????RVGGW------------TL---SDPFFY-------------------FGDK-SKRDTFVASVKEF-------LQTWK--------FFDGVDID--WEYPGG--GGANPNL-----GNAN-DGETYVTLMRELRA-MLDELSAET--GRT----YELTSAIGI-DAQ----KMAK------VDYQAAQQYMDY-IFLMSYDFNGG-WTNT---ELGHQTNLYEASW-----------------DPDTRYT---------TDKG--VKALLTQG-VTPGKIVVGAAMYG-RGWTGVNGYTGN-----------NP------FTGTA----------TG--KVKGT------------------------W-E-DG-------IVDYRQIVNEYMG--------SGWTYSYDE----TAEAPSLFKASTGDLITFD--DARSVKAKGQYVLANQLGGLFAWEIDAD Serratia_marcescens_81 FTVDKIP----AQNLTHLLYGFIPICGGNG-INDSLKEIE----------------GSFQALQRSCQGRED--FK-------ISIHDPFA--ALQKAQKGV---TAWD---DPYKG-N-FGQLMALK----QAHP-DLKILPSIGGW------------TL---SDPFFF-------------------MGDK-VKRDRFVGSVKEF-------LQTWK--------FFDGVDID--WEFPGG--KGANPNL-----GSPQ-DGETYVLLMKELRA-MLDQLSAET--GRK----YELTSAISA-GKD----KIDK------VAYNVAQNSMDH-IFLMSYDFYGA-FDLK---NLGHQTALNA--------------------RPGSRHR---------LHHGERRECAAGQG-VKPGKIVVGTAMYG-RGWTGVNGYQNN-----------IP------FTGTH----------R---AVKGT------------------------W-E-NG-------IVDYRQIASQFMS--------GEWQYTYDA----TAEAPYVFKPSTGDLITFD--DARSVQAKGKYVLDKQLGGLFSWEIDAD Sodalis_glossinidius_63 ????DKG-----ANQYKIEQAAAWTGKKQ---YEMTIL------------------DPWGDCQAYFNNGFSSY-------------KDFG--FGPGTTYNGG-SQEDCFKESHPNLQGVLGALLALKKKAALAGH-DLALSFSVGGW------------TM---SEIFHE-------------------MVKSDQAINTFVSSIVDF-------FQRFP--------SFSEIDID--WEYPNAAGAGNPHGP---------EDGANYQKLIAALRQ-AFNSHNRQD---------IKISIASSA-NVD----VLQH------SNIKGLLAAGLYGINVMTYDFFGTPWHE----GLTNHTNLYK----T----------------EHSSYS---------LEEA--VTYLLEQG-VDPDVINVGYAGYS-RSAKGAEISSFS------------P------LKGTYE----------GNDTTVGT------------------------F-E-SGCVEWYDVLYNYLDLENKSGRNGY--------QVYTDD----VACADYLYSPTAKVFHSID--TPRSVREKARYVIEKGLGGIFTWTIDYD Spodoptera_VIRUS_74 FPVDKVP----APNLSHILYGFVPICGGDG-INDALKTVP----------------GSFEALQRSCAGRAD--FK-------VAIHDPWA--AIQKPQKGV---SSWN---EPYKG-N-FGQLMAMK----RANP-HIKVFASIGGW------------TL---SDPFYH-------------------MHDA-DVRRVFIDSVEEF-------LLTWK--------FYDGVHID--WEFPGG--KGANPDV-----GDAERDRETYTLLLQELRL-RLNALGART--NRY----YALTSAVSA-GND----KIAV------VNYTEAQKYLDT-IFLMTYDFKGA-WSNT---ELGHQTALFAPTW-----------------RPDEPYC---------ADRA--VELLLGQH-VPAGKIALGVAMYG-RGWSGVVSDDTD-----------NP------FLGVA----------DG--PVPGT------------------------W-E-AG-------VVDYRQIVHNMS----------QYDYVYDE----VVKGAYVYNRENGNLITYD--DPKSVADKTKYVLDHELAGVFAWEIDAD Stenotrophomonas_maltophilia_43 YRVKNIDTSGSAAKLTHINYAFGNV--RNNRCEVGVTQASDP-----N---TGVGGDAFADYTKAFGAGES--VS-------G-SADTWD--Q-------------------PLRG-N-WNQLKQLK----AKHP-NVKVLISLGGW------------TW---SRGFSS-------------------AAQP-ANRQAFVASCVDAYIKGNLPVTDGAGGVGAAAGVFDGIDID--WEYPVA--CG--LS------CGTPADNANYTALLAEFRRQLD---AVRP--G------LLLTVAVGA-GID----KIRV------TDPAAYHPYLDF-INVMTYDFHGA-WDPQ----TNHHSALFDSPADP-------------STGDQKLYN---------SNDA--MEAFLSRG-VPASKLNLGIGYYG-RGWTGVASGNNG--------------------LYKSA---------GG--AAPGT------------------------Y-E-AG-------IEDWKVLKNLNWP------------VYTDT----VAKATWISN--GTTFWSVD--TPAMVTEKMGYVKAQGLGGAFFWEFSGD Streptomyces_coelicolor_46 YHVKNIESSGSADKLTHINYSFGNV--TGG--KCAM-------------------GDAYAATDRAYTAADS--VD-------G-VADTWD--Q-------------------PLRG-N-FNQLLKLK----QKHP-DLKILWSFGGW------------TW---SGGFAQ-------------------AAQN---PEAFAQSCYDL-------VENSK-----WADVFDGIDID--WEYPNA--CG--LS------CDT-SGRDAFPKLMGALRAKFGQ----------D----YLVTAAITADATAGG--KIDA------ADYAGAAQYVDW-YNPMTYDFFGA-WDATG--PTAPHSPLTSYSGIP-----------------KEDFH---------TSAT--IAKLKGLG-VPSSKLLLGLGFYG-RGWTGVTQADPG----------------------GTA---------NG--PAKGT------------------------Y-E-NG-------IEDYKVLKTSCP--------------ATGT----VGGTAYAKC--GSDWWSYD--TPQTIATKMAYKNEQGLGGTFFWELSGD Streptomyces_coelicolor_49 YHVKNLVTSGSADKITHINYAFGNV--QGG--KCTI-------------------GDSYADYDKAYTADQS--VD-------G-VADTWD--Q-------------------PLRG-N-FNQLRKLK----AKYP-NIKILYSFGGW------------TW---SGGFPD-------------------AVKN---PAAFAKSCHDL-------VEDPR-----WADVFDGIDLD--WEYPNA--CG--LS------CDETSAPNAFSSMMKAMRAEFGQ----------D----YLITAAVTADGSDGG--KIDA------ADYGEASKYIDW-YNVMTYDFFGA-WAKNG--PTAPHSPLTAYDGIP-----------------QQGFN---------TADA--MAKFKSKG-VPADKLLIGIGFYG-RGWTGVTQSAPG----------------------GTA---------TG--PATGT------------------------Y-E-AG-------IEDYKVLKNSCP--------------ATGT----IAGTAYAHC--GSNWWSYD--TPATIKSKMDWAEQQGLGGAFFWEFSGD Streptomyces_coelicolor_6 YLASDIP----WDKITHINYAFAHVDGGN---RLSVG-----------------------------SDGEK--NA--------ATGMTWP--GVE--------GAEMDPG-LPYK--GHFNLLNKFK----KQHP-DVKTMISVGGW------------AE---TGGYFADDGSRVDSGGFYSMATKADGSVNQAGIDTFADSAVDF-------VRKYG---------FNGVDID--YEYPTTMKDAGNPLDWSFANGRRAGLVKGYAALMKTLRE-KLDRAGAAD--GRH----YLLSVAAPSSGYL-----LRG------METFQVQKYLDY-VNIMSYDLHGA-WNE----YVGPNASLFDDGRDA-------------ELAAANVYGSAQYGGIGYLNTDWAYH-YFRGS-MPAGRINIGLPYYT-RGHKNVQGGTDGLWGRASA---STC------PAGSG-----LTKCGDGAVGIDNLWHDLDTNGKESPAGSNPMWHAKNLE-K-GI-------VGDYVTDYGF-PADT---KLTGTYARKYDS----TLVAPWLWNAEKKVFLSTE--DEQSVGAKADYVADRGIGGAMIWELAGD Streptomyces_lividans_48 YHVKNLVTSGSADKITHINYAFGNV--QGG--KCTI-------------------GDSYADYDKAYTADQS--VD-------G-VADTWD--Q-------------------PLRG-N-FNQLRKLK----AKYP-NIKILYSFGGW------------TW---SGGFPD-------------------AVKN---PAAFAKSCHDL-------VEDPR-----WADVFDGIDLD--WEYPNA--CG--LS------CDETSAPNAFSSMMKAMRAEFGQ----------D----YLITAAVTADGSDGG--KIDA------ADYGEASKYIDW-YNVMTYDFFGA-WAKNG--PTAPHSPLTAYDGIP-----------------QQGFN---------TADA--MAKFKSKG-VPADKLLIGIGFYG-RGWTGVTQSAPG----------------------GTA---------TG--PATGT------------------------Y-E-AG-------IEDYKVLKNSCP--------------ATGT----IAGTAYAHC--GSNWWSYD--TPATIKSKMDWAEQQGLGGAFFWEFSGD Streptomyces_olivaceoviridis_7 YLAPDIP----WDKVTHINYAFAHVDGGN---KLSVG-----------------------------ADTAA--NP--------ATGMTWP--GVA--------GAEMDPA-LPYK--GHFNLLNKFK----KQHP-DVKTLISVGGW------------AE---TGGYFGADGKRVDSGGFYSMATNADGSVNRAGIDTFADSAVAF-------VRKYG---------FNGVDID--YEYPTTMKDAGNPLDWSISNGRRAGLVKGYAALMKTLRE-RLDRAGAAD--GKH----YLLSVAAPSSGYL-----LRG------METFQVQKYLDY-VNIMSYDLHGA-WNE----YVGPNASLFDDGKDA-------------ELAAAGVYSTSQYGGIGYLNTDWSYH-YFRGS-MPAGRINIGLPYYT-RGFKNVTGGTDGLWGRAPA---TTC------PAGSG-----LTKCGDGASGIDNLWHDLDTNGKESPAGSNPMWHAKNLE-K-GV-------VGDYVTKYGF-PADT---RLTGTYARKYDA----TLVAPWLWNAEKKVFLSTE--DEQSVNAKADYVVDRGIGGTMVWELAGD Streptomyces_thermoviolaceus_47 FNVKNLDTSGTAAKITHINYAFGNV--TGG--KCAI-------------------GDSYADYDKAFTADQS--VS-------G-QADTWD--Q-------------------PLRA-N-FNQLRQLK----AKYP-HIKVLWSFGGW------------TW---SGGFAD-------------------AAKR---PAAFAQSCYNL-------VHDPR-----WDGVFDGID----WEYPNA--CG--LT------CDS-SGPDAFRNLMAAVRSTFG-----------D----ELVTAAVTADGTPGG--KIEA------TDYAGAAQYVDW-YNVMTYDFFGA-WDAQG--PTAPHSPLTSYDGIP-----------------KQGFT---------SADA--IAAFKAQG-VPADKLLLGIGFYG-RGWTGVTQDAPG----------------------GTA---------TG--PAAGT------------------------W-E-QG-------IEDYKILKNTCP--------------VTGT----VAGTAYAHC--GSNWWIYD--TPDTIASKMAWANDQGLRGAFVWDFSGD Thermococcus_kodakaraensis_8 FYVSDIP----WEKVTHVNYAFLDLKEDG---TVAFY-------------------------------------------------DTYA--DPLN-----------------------LEAMKEYK----RKYP-AVKVLISVGGW------------TL---SKYFSV-------------------VAADPAKRQRFAETAIEI-------LRKYN---------LDGIDID--WEYPGG---GGMAGN-----YESPDDGKNFVLLLKDLRE-ALDKAAKED--HKD----YLLTAATPADPVK-----AGR------IDWVEASKYLDS-INIMTYDYHGA-WET----ITGHLAPLYCDPNAP-------------YTDENVKYH---------FCVNYTVQWYIQHV-PDKTKITVGLPFYS-RSFANVPPENNG---------LYQP------FSGTP----------------AGTWGP--------------------AY-ETYG-------VMDYWDVAEKNQS--------SEYEYHWDP----IAQVAWLYSPSKRIFITFD--DPRAIGIKVDYMLKNGLGGVMIWEITAD Trichoderma_harzianum_60 FQPQNLV----ASDITHVIYSFMNFQA-D---GTVVSG------------------DAYADYQKHYDD------------------DSWN--DVGNNAY------------------GCVKQLFKLKK----ANR-NLKVMLSIGGW------------TW---STNFPS-------------------AASTDANRKNFAKTAITF-------MKDW---------GFDGIDVD--WEYPADD-----------------TQATNMVLLLKEIRS-QLDAYAAQYAPGYH----FLLSIAAPA-GPE----HYSF------LHMSDLGQVLDY-VNLMAYDYAGS-WSS----YSGHDANLFANPSNP----------------NSSPYN---------TDQA--IKDYIKGG-VPASKIVLGMPIYG-RAFESTGGIG-Q------------T------YSGIG----------------SGS------------------------W-E-NG-------IWDYKVLPKAGAT------------VQYDS----VAQAYYSYDPSSKELISFD--TPDMINTKVSYLKNLGLGGSMFWEASAD Ustilago_mayidis_51 YSPLDVP----YCNLTHVLYAFADVNPDT---GECFLT------------------DLWADEQIHYTG------------------DSWN--DTGNNLY------------------GNFKQFLLLKK----KNR-ALKLMLSVGGW------------TF---GPHFAP-------------------MAADAKKRAKFVSTAITI-------LEND---------GLDGIDID--WEYPSDS-----------------TQAANFVLLLKELRA-GLTAHQAKKNETNP----YLLSIAAPC-GPD----HYKV------LQVAKMDQYLDF-WNLMAYDFAGS-WSA----LTGHQANLWN----I----------------KGAPPS---------ADDS--INYYIGQG-VVSHKLVLGIPLYG-RGFENTDGPQ-Q------------P------YRGTG----------------QGT------------------------W-E-AG-------NWDYKFLPVKGAK------------EMIN----TKIAASWSYDSAKREFISYD--TPQNVLLKCQYIRNKRLRGAMFWELSGD Vibrio_cholerae_69 FTVDNIP----GQNLTHILYGFIPICGP----NESLKSVG---------------GNSFNALQTACKGVPD--FE-------VVIHDPWA--AYQKSFPQA--GHQYS---SPIKG-N-YAMLMALK----KTYP-DLKIIPSIGGW------------TL---SDPFFS-------------------FTDK-AKRDVFVASVKRF-------LKTWK--------FYDGVDID--WEYPGG--GGQAADL-----GDPVKDGPAYVALMAELRA-MLDELEAET--GRK----YELTSAIGV-GHD----KIED------VNYGQAVQYMDY-IFAMTYDFYGG-WNN----VLGHQTALYCGSFMRPGQCDGKGVDENGEPYKGPAYT---------TDNG--IQLLLAQG-VPPSKLVVGAAMYG-RGWEGVTPASLK-DP-------NDP------MTGVG----------NG--KLKGTTAQ-------------------GVW-E-AG-------VIDYKGVKNFMLGANK--TGVNGFEYGYDE----QAEAPWVWNRTTGQLVTFD--DDRSVKAKGAYVRNLGLAGLFSWEIDAD Aeromonas_punctata_78 FTVDKIP----AQNLTHILYGFTPICGGNG-INDSLKEIS----------------GSFEALQRSCAGRED--FK-------VSIHDPWA--AIQMSQGNL---SAWD---EPYKG-N-FGNLMALK----QAHP-DLKILPSVGGW------------TL---SDPFYF-------------------LGDK-TKRDTFVASVKEF-------LQTWK--------FFDGVDID--WEFPGG--QGANPSL-----GGPN-DGATYVVLMKELRA-MLDELEAET--GRQ----YELTSAISA-GGD----KIAK------VDYQAAQQYMDH-IFLMSYDFSGA-FDLT---NLAHQTNLFGSSW-----------------DPATKYT---------TDKG--VKALLGQG-VTPGKIVVGAAMYG-RGWTGVKNYQAG-----------NP------FTGTA----------TG--PVSGT------------------------W-E-NG-------VVDYRDIVNNRMG--------AGWEQGYDE----SAEAPYVFKASSGDLITFD--NDRSVKTKGQYVLANQLGGLFAWEIDAD Alteromonas_sp_4 YLVDDIP----WDKITHINYAFAHVDANN---KVSIGN----------------------------PTAPN--NA--------ATNMTWP--GVA--------GAEMDPS-LPYT--GHFNLLNKFK----KQHP-DVKTLISVGGW------------AE---TGGYFDETGKRIASGGFYTMTTNADGSVNHAGIDAFVASSVEF-------IRKYN---------FDGVDID--YEYPSSMNDSGHPDDFAISNPRRAALNASYQVLMKKLRE-ALDQAGQQD--NTH----YLLTIASPSSGYL-----LRG------METFQVTKYLDY-VNIMSYDLHGA-WNQ----HVGHNASLFDTGEDS-------------ELKQWNVYGTKEFEGIGYLNTDWAVK-YFRGS-VSAGRINIGIPYYT-RGFRDVTGGTNGLWGQAALPNQADC------PPGTGS--GEKNKCGNGAVGIDNLWHDKNDVGLEVPAGSNPLWHVKNLQ-N-GV-------LGSYLSDYGLDPVNNPEHQISGTYARHYDS----VAVAPWLWNATKNVFLSIE--DEESMAAKVDYVINQELGGIMFWELAGD Alteromonas_sp_67 YDVTKIP----AHNLSHILYGFIPICGP----NESLKSIEI--------------GNSWRALQTACADSQD--YE-------VVIHDPWA--AVQKSMPGV----DAK---DPIRG-V-YSQLMALK----QRYP-DLKILPSVGGW------------TL---SDPFHG-------------------FTNK-ANRDTFVASVKQF-------LKTWK--------FYDGVDID--WEFPGG--DGPNPDL-----GDPINDGPAYVALMQELRA-MLDELEAET--GRQ----YELTSAIGA-GYD----KIED------VDYQAAQQYMDY-IFAMTYDFYGA-WNN----ETGHQTGIYCGSHLSTDECNGTGVDDNGVPRKGPAYT---------GDHA--IQLLLQQG-VQPSKLVMGVAMYG-RGWEGVLDANAA-IP-------GNP------MTAPG----------NG--PLTGSTSE-------------------GVW-E-PG-------IMDYKAIAANAVGQGG--SGVNGYEVGYDE----QAQAAYVWNRSNGKLITYD--SPRSVIAKGQYANTHQLAGLFGWEIDAD Anopheles_gambiae_33 YDIEHID----PSLCTHLMYGFFGINEDA---TVRIIDP-------------------------------------------------YL--DLEENWG-----------------RGHIKRFVGLK----NVGP-GLKTLAAIGGW------------NE---GSRK------------------FSAMAASGELRKRFISDCVAF-------CQRHG---------FDGIDLD--WEYPA--QRDGNPL----------IDRDNHAQLVEEMREEFDHYG-------------LLLTAAVASVEFS----AGVS------YDIPRISKSFHF-LNVMVYDMHGA-WDS----YCGINAPLYRGSADTTDRL------------G---QI----------NVNASIHFWLAQG-CTGRKLVLGIPLYG-RNFTLASAANTQ------I---GAP------TVGGG---------------TVGRYT----------------------R-E-PG-------VMGYNEFCEKLATE--------AWDLRWSE----EQQVPYAVR--NNQWVGYD--DLRSVQLKVKYLLDQGLGGAMVWSLETD Aphanocladium_album_61 FQPADLP----ASEITHVLYSFMNVRA-D---GTIFSG------------------DTYADYEKHYAG------------------DSWN--DVGTNAY------------------GCVKQLYLLKK----QNR-NMKVMLSIGGW------------TW---STNFPA-------------------AASSAATRKTFAQSAVGF-------MKDW---------GFDGIDID--WEYPADA-----------------TQAQNMVLLLQAVRS-ELDSYAAQYAKGHH----FLLSIAAPA-GPD----NYNK------LKFAELGKVLDY-INLMAYDYAGS-WSN----YTGHDANIYANPQNP----------------NATPYN---------TDDA--VQAYINGG-VPANKIVLGMPIYG-RSFQQTEGIG-K------------P------YNGIG----------------SGS------------------------W-E-NG-------IWDYKALPKAGAT------------VKCDD----TAKGCYSYDPSTKELISFD--TPAMISTKVSWLKGKGLGGTMFWEASAS Arabidopsis_thaliana_18 PAT-DID--SSLF--THLFCTFADLEAESY--EITIAT------------------------------------------------WNQA--PFH-A----------------------FTETVQQR------NP-HVKTLLSIGGG------------NA---DKDAFA------------------SMASNPDSRASFIQSTITV-------ARSYG---------FHGLDLD--WEYPR-----------------NEEEMYDFGKLLEEWRSAVEA----ESNSSGTTA--LILTAAVY-YSSNYQ--G-VP------YPVLAISNSLDW-INLMAYDFYGPGWST----VTGPPASLYLPTD------------------GRSGDS------------G--VRDWTEAG-LPAKKAVLGFPYYG-WAWTLADPDVN---------GYDAN------TTGPAIS-------------DDGEIS----------------------Y-R-Q---------LQTWIVDNGATK-------------VHDD----MMVGDYCYAGT--TWIGYDS-EKSIVTKV-IYAKQKGLLGYFSWHVGGD Arabidopsis_thaliana_19 PLA-QID--SSLF--THLFCAFADINTLTY--QVIVSS------------------------------------------------RNKP--KFS-T----------------------FTQTVRRR------NP-TVKTLLSIGGD------------FT---YNFAFA------------------SMASNPTSRKLFISSSIKL-------ARSCG---------FHGLDLN--WKYPS-----------------ITTEMDNFGKLLREWRLAVEA----EARSSGKPR--LLLTAAVF-YSYSYY--S-VL------HPVNAVADSLDW-VNLVAYDFYESGSSR----VTCSPAPLYDPIT-T----------------GPSGDA------------G--VRAWTQAG-LPAKKAVLGFPLYG-YAWCLTDAKNH---------NYYAN------SSGPAIS-------------PDGSIG----------------------Y-D-Q---------IRRFIVDNKATM-------------VYNS----NLVQNYCYAKK--TWIGYDD-NQSIVMKV-KYAKQRGLLGYFSWHIGAD Arthrobacter_sp_3 YLASDIP----WKKLSHINYAFAHIDKNN---KVSVG-----------------------------AETPG--NA--------ATDLTWP--GGC--------GAEMDPT-LPYK--GHLNQLKKFK----KENP-GVKTLVSVGGW------------AE---TGGHFAADGTRVGDGGFYTLT-ES-----QAKIDTFSDSAVEF-------IRKYG---------FSGVDID--YEYATSNSKAGNPDDFAISEPRRAVLFENYMKLMKTLRE-KLDKASVAD--GTY----YQLTVAAPASGWL-----LRG------MEAHQVVKYLDF-VNMMSYDLHGA-WNN----FVGGNPALFDDGKDP-------------ELAAGGVYN--AYKGIGYLNSDWAYH-YFRGA-MPAGRINLGVPFYT-RGWTNVQGGTNGLYGSSVLADQNKC------APGTGPKAGGNSKCGDGAGGIDNLWHDSDPMGGELAAGANPIWHVLNLQ-K-GV-------VGDYAASYGS-PTGA----LKGTYTRHFDN----VTKNEWWWNDTTKTFLSGD--ADQAIQAKADYVADKGLGGVMIWELAGD Aspergillus_nidulans_26 LNPEDLL----MGAYTHLNYAFAFIDPES---YKIANM------------------------------------------------QDSD--EEY------------------------MPRLTALK----NYNP-SLEVWIAIGGW------------SMNDPDQPTRR---------------TFSELAASKSHQDVFFESLLSF-------MDKYG---------FDGVDID--WEYPVAEERSGAPED-----------FENYVSFLKNL---RAVLG--------N----RGLTITLPASFWY-----LQH------FDIKNMEPILDW-FNIMSYDLHGT-WDGTNP-YLGPYINSHTNLT------------------EIDLA----------------MELLWRND-IDPKKVVMGMGFYG-RSFTLSDPACN------------TP------GCGFS---------------AGGN-------------------PGKCSA-S-AG-------SLMFSEIQEIIDAG--------G-AKVTND----EKAGVQMVTWDTNQWVSYD--DDETLKAKMEYANELCLGGVMVWAASTD Aspergillus_nidulans_54 YNPQDLP----AEKLTHILYAFANVRPET---GEVYLS------------------DTWSDIEKHYPT------------------DSWN--DTGNNVY------------------GCVKQLGLLKR----QHR-QLKVLLSIGGW------------TY---SPNFTN-------------------GAGTPENRARFAQTATKL-------ITDL---------GFDGIDID--WEYPQND-----------------QQAQNYVDLLRRCRE-ALNAAQGQR----R----FQLTVAVPA-GPD----NYNK------LRLQEMTPYLDF-YNLMAYDYAGS-WDQ----TAGHQANLYPSTSNP----------------TSTPFN---------TVQA--VNHYIDAGGVPSNKIILGMPIYG-RAFQNTDGPG-R------------P------YSGIG----------------QGT------------------------W-E-QG-------VYDYKALPRPGAT------------EQLDT----NIGASWSYDPSSREMVSYD--TVAAADLKAAYIQSRRLGGAMWWETSAD Autographa_VIRUS_76 FPVDKVP----LPNLSHLLYGFIPICGGDG-INDALKTIP----------------GSFESLQRSCKGRED--FK-------VAIHDPWA--AVQKPQKGV---SAWN---EPYKG-N-FGQLMAAK----LANP-HLKILPSIGGW------------TL---SDPFYF-------------------MHDV-EKRNVFVDSVKEF-------LQVWK--------FFDGVDID--WEFPGG--KGANPSL-----GDADGDAKTYILLLEELRA-MLDDLEAQT--GRV----YELTSAISA-GYD----KIAV------VNYAEAQKSLGK-IFLMSYDFKGA-WSNT---DLGYQTTVYAPSW-----------------NSEELYT---------THYA--VDALLKQG-VDPNKIIVGVAMYG-RGWTGVTNYTND-----------NY------FSGTG----------NG--PGSGT------------------------W-E-DG-------VVDYRQIQKDLN----------NYVYTFDS----AAQASYVFDKSKGDLISFD--SVDSVLGKVKYVDRNKLGGLFAWEIDAD Bacillus_cereus_15 YQVADID----ASKLTHLNYAFADICWNG---KHGNPSTH---------------PDNPNKQTWNCKESGVPLQNKEVPNGTLVLGEPWA--DVTKSYPGS--GTTWEDC-DKYARCGNFGELKRLK----AKYP-HLKTIISVGGW------------TW---SN-RFS------------------DMAADEKTRKVFAESTVAF-------LRAYG---------FDGVDLD--WEYPGV---ETIP-----GGSYRPEDKQNFTLLLQDVRN-ALNKAGAED--GKQ----YLLTIASGASQRY-----ADH------TELKKISQILDW-INIMTYDFHGG-WEA----TSNHNAALYKDPND------------------PAANTN--------FHVDGAINVYTNEG-VPVDKLVLGVPFYG-RGWKSCGKENNGQY--------QPC------KPGSD-----------GKLASKGTWDDYSTGD----TGV-------------YD-------YGDLAANYVN----------KNGFVRYWND----TAKVPYLYNATTGTFISYD--DNESMKYKTDYIKTKGLNGAMFWELSGD Bacillus_circulans_12 YNVTDID----PTKVTHINYAFADICWNG---IHGNP--D---------------PSGPNPVTWSCQNEKSQTIN--VPNGTIVLGDPWI--DTGKQFA----GDTWD---QPYA--GNINQLNKLK----QVNP-NLKTIISIGGW------------TW---SN-RFS------------------DVAATSATREVFANSAVDF-------LRKYN---------FDGVDLN--WEYPVS---GGLD-----GNSKRPEDKQNYTLLLSKIRE-KLDAAEAVD--GKE----YLLTIASGASPTY-----AAN------TELANIASIVDW-INIMTYDFNGA-WQK----ISAHNAPLNADPAAA-------------SAGVPDSNT---------FNVAAGAQGHLNAG-VPAAKLVLGVPFYG-RGWDGCAQANNGQY--------QTC------SGG----------------SSIGTWEA----------GS-------------FD-------FYDLEANYIN----------KNGYTRYWND----TAKVPFLYNASNKRFISYD--DAESIGHKTAYIKSKGLGGAMFWELSGD Bacillus_halodurans_13 YQVWDID----ASKISHINYAFANICWDG---RHGNP--D---------------PAGPNPQTWSCQDENG-VID--VPNGSIVMGDPWI--DAQKSNP----GDTWD---EPLR--GNFKQLNKLK----EEHP-HLKTLISVGGW------------TW---SN-RFS------------------DMAATKETRENFANSAVEF-------IRKYG---------FDGVDVD--WEYPVS---GGLP-----GNSRRPEDKENHVLLLQEVRD-KLDEAGQED--GKD----YLLTIASGASPGY-----VEN------NKLNEIAEIVDW-INIMTYDFNGG-WQN----ISGHNAPLYYDPATA-------------NTELPTPEH---------FNVESAVEGHLQAG-VPEHKLVLGMPFYG-RGWSNCDGANQGEY--------QRC------AP-----------------PREGTWEN----------GV-------------FD-------FSDLEDHYIN----------KNGYQRYWND----VAKVPFLYNATNGNFITYD--DEESFRYKTDFIKSNNLAGSMFWDVSGD Bacillus_thuringiensis_14 YQVADID----ASKLTHLNYAFADICWNG---KHGNPSTH---------------PDNPNKQTWNCKESGVPLQNKEVPNGTLVLGEPWA--DVTKSYPVS--GTTWEDC-DKYARCGNFGELKRLK----AKYP-HLKTIISVGGW------------TW---SN-RFS------------------DMAADEKTRKVFAESTVAF-------LRAYG---------FDGVDLD--WEYPGV---ETIP-----GGSYRPEDKQNFTLLLQDVRN-ALNKAGAED--GKQ----YLLTIASGASQRY-----ADH------TELKKISQILDW-INIMTYDFHGG-WEA----TSNHNAALYKDPND------------------PAANTN--------FYVDGAINVYTNEG-VPVDKLVLGVPFYG-RGWKSCGKENNGQY--------QPC------KPGSD-----------GKLASKGTWDDYSTGD----TGV-------------YD-------YGDLAANYVN----------KNGFVRYWND----TAKVPYLYNATTGTFISYD--DNESMKYKTDYIKTKGLSGAMFWELSGD Betula_pendula_20 RVQ-NSD--RYSFPLTHFYLG-IDLGSSDYN-QEISST------------------------------------------------KRSP--QFETS----------------------FADTVRQR------WP-DVKILLSIGG------------------DPSFLA------------------EIASNEESRRAFIDYVPSL-------LRLWK---------FDGFDLR--WLYPV-----------------TALEMANFGSLLTGLREALP------------PP--LLLTAAVF-YSPYYW--SSLE------YPIQAIVDSCDW-INVLAFDLYTPDSSPK---LT????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Betula_pendula_21 RVQ-NSD--RYSFPLTHFYLG-IDLSSSDYN-QEISST------------------------------------------------TRSP--QFETS----------------------FADTVRQR------WP-DVKILLSIGGE------------SG---DPSFLA------------------EIASNEESRRAFIDYVPSL-------LRLWK---------FDGFDLR--WLYPV-----------------TALEMANFGSLLTGLREALP------------PP--LLLTAAVF-YSPYYW--SSLE------YPIQAIVDSCDW-INVLAFDLYTP??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Bombyx_VIRUS_77 FPVDKVP----LPNLSHLLYGFIPICGGDG-INDALKTIP----------------GSFEALQRSCRGRED--FK-------VAIHDPWA--AVQKPQKGV---SAWN---EPYKG-N-FGQLMAAK----LANP-HLKILPSIGGW------------TL---SDPFYF-------------------MHDV-EKRNVFVESVKEF-------LQVWK--------FFDGVDVD--WEFPGG--KGANPSL-----GDAERDAKTYILLLDELRE-MLDDLEVQT--GRV----YELTSAISA-GYD----KIAV------VNYAEAQKSLDK-IFLMTYDFKGA-WSNT---DLGYQTTVYAPSW-----------------NSEELYT---------THYA--VDALLEQG-VDPNKIIVGVAMYG-RGWTGVTNYTNG-----------NY------FSGTG----------NG--PVSGT------------------------W-E-DG-------VVDYRQIQKDLN----------NYVYTFDS----AAQASYVFDKSKGDLISFD--SVDSVLGKVKYVDRNKLGGLFAWEIDAD Bos_taurus_36 ILPRDLD----PFLCTHLVFAFASMSNN----QIVPKD--------------------------------------------------PQ--DE----------------------KILYPEFNKLK----ERNR-GLKTLLSIGGW------------NF---GTVR------------------FTTMLSTFSNRERFVSSVIAL-------LRTHG---------FDGLDLF--FLYPG--LRGSPA-----------RDRWTFVFLLEELLQAFKNEAQLTM--RPR----LLLSAAVSGDPHV----VQKA------YEARLLGRLLDF-ISVLSYDLHGS-WEK----VTGHNSPLFSLPGDP----------------KSSAY---------------AMNYWRQLG-VPPEKLLMGLPTYG-RTFHLLKASQNE------L---RAQ------AVGPA---------------SPGKYT----------------------K-Q-AG-------FLAYYEICCFVR----------RAKKRWIN----DQYVPYAFK--GKEWVGYD--DAISFGYKAFFIKREHFGGAMVWTLDLD Bos_taurus_40 FKPDNID----PCLCTHLIYAFAGMSNS----EITTIE--------------------------------------------------WN--D-----------------------VALYSSFNDLK----KKNS-QLKILLAIGGW------------NF---GTAP------------------FTAMVATPENRKTFISSVIKF-------LHQYG---------FDGLDFD--WEYPG--FRGSPS-----------QDKHLFTVLVQETREAFEQEAKQTN--KPR----LLVTAAVAAGISN----IQAG------YEIPQLSQYLDF-IHVMTYDFHGS-WEG----YTGENSPLYKYPTDT----------------GSNTYL----------NVEYAMNYWKKNG-APAEKLIIGFPAYG-HNFILRDASNNG------I---GAP------TSGAG---------------PAGPYT----------------------R-E-AG-------FWAYYEICAFLKD---------GATEAWDD----SQNVPYAYK--GTEWVGYD--NVNSFRIKAQWLKENNFGGAMVWAIDLD Brugia_malayi_31 FLPGNIP----NGLCTHILYAFAKVDELG---DSKPFE---------------------------WNDED----------------TEWS---------------K-----------GMYSAVTKLR----ETNP-GLKVLLSYGGY------------NFG--SAIFTG-------------------IAKSAQKTERFIKSAIAF-------LRKNN---------FDGFDLD--WEYPVG-------------------VAEEHAKLVEAMKTAFVEEAKTSG--KQR----LLLTAAVSA-GKG----TIDGS-----YNVESLGKNFDL-LFLMSYDLHGS-WEK----NVDLHGKLHPTKGEVS---------------GIGIFN---------TEFA--ADYWASKG-MPKEKIIIGIPMYA-QGWTLDNPSETA------------I------GAAAS----------R---PSSASKT----------------------N-PAGG-------TASYWEICKYLKE---------GGKETVHQ----EGVGAYMVK--GDQWYGYD--NEETIRIKMKWLKEKGYGGAFIWALDFD Bufo_japonica_35 YVPGNID----PQLCTHLVYAFATMNEH----KIAPYE--------------------------------------------------WN--D-----------------------DVLYKQFNDLK----QKNK-NLVTLLAIGGW------------NF---GTQK------------------FTDMVASSGNRSIFIKSVIAY-------LRQNN---------FDGIDLD--FEYPG--SRGSPP-----------EDKQRFTVLIQEMLDAFNEEARSSG--LPR----LLITAAVSAGKGT----IDAG------YEIAKIGQLLDF-ISVMTYDFHGG-WDT----QSGHNSPLCKGSTDY----------------GDLQYF----------NIHFAMNYWKNNG-APAEKLLLGFPTYG-RTFRNPNPNMCD------V---GIP------VSGAG---------------SAGPYT----------------------R-E-AG-------FWAYYEICTWLS----------GSTVKWIP----DQRVPYACK--SNEWVGFD--NQESYECKVRFLKESGFGGAMVWAIDLD Burkholderia_cepacea_82 FTVDKIP----AQNLTHLLYGFIPICGGNG-INDSLKEIE----------------GSFQALQRSCQGRED--FK-------VSIHDPFA--ALQKAQKGV---TAWD---DPYKG-N-FGQLMALK----QAHP-DLKILPSIGGW------------TL---SDPFFF-------------------MGDK-VKRDRFVGSVKEF-------LQTWK--------FFDGVDID--WEFPGG--KGANPNL-----GSPQ-DGETYVLLMKELRA-MLDQLSAET--GRK----YELTSAISA-GKD----KIDK------VAYNVAQNSMDH-IFLMSYDFYGA-FDLK---NLGHQTALNAPAW-----------------KPDTAYT---------TVNG--VNALLAQG-VKPGKIVVGTAMYG-RGWTGVNGYQNN-----------IP------FTGTA----------TG--PVKGT------------------------W-E-NG-------IVDYRQIAGQFMS--------GEWQYTYDA----TAEAPYVFKPSTGDLITFD--DARSVQAKGKYVLDKQLGGLFSWEIDAD Caenorhabditis_elegans_30 FVPEDYT----PGLCTHILFAFGWMNADY---TVRAYDP---------------------------ADLP----------------NDWA--G------------E-----------GMYRRVNKLK----VTDT-QLKTLLSFGGW------------SFG--TALFQG-------------------MAASSASRKVFIDSAITF-------VRTWG---------FDGIDID--WEYPSG-----------------ATDMANYVALVKELKAACESEAGSTG--KDR----LLVTAAVAA-GPA----TIDAG-----YDIPNLAPNFDF-ILLMSYDFFGA-WAS----LVGFNSPLYATTELP---------------AEWNGWN---------VDSS--ARYWNQKG-MPKEKIIVGMPTYG-RGWTLNNASAIN------------P------GTSGS--------------PAKITQY---------------------VQ-E-AG-------VGAYFEFCEMLAN---------GATRYWDS----QSQVPYLVQ--GNQWWSYD--DEESFANKMAYVKREGYGGAFVWTLDFD Candida_albicans_50 HFPQDIP----IEYFTHIFYAFILIDEQTG--KLKFS-------------------------------------------------DEWC--DLQMPQPSP-----------NQSITGNLQQFYEMK----KKNR-HLKLIMSIGGW------------GI---CHLFES-------------------VVSNDTKFDNFVNSTIEF-------VEKYG---------FDGVDID--WEYPKN-----------------STQAAKLVELLARLRN-KLNS---K----------YIITVAAPG-GSD----NIEI------LKIQEMDKYLTF-WNLMCYDFAGEGWSS----KTAFHSNLFGNNG-------------------DNSLN-----------ASDVVQTYINKG-VHPTKLILGMPMYG-RIFHGVDRPEIG-----------IP------FTKER---------------KSGC--------------------------IEAD-------VVDYNKFGDTFDY------------EDFDP----RKVGALKYDSHSKQLITFD--NPQCARIKASFVQSRQLGGGMWWDSAGD Cellulomonas_uda_44 YHVNNIRTSGSASKLTHILYAFGNT--TGG--RCSI-------------------GDAYAAYDKAYTADQS--VD-------G-VADTWD--Q-------------------PLRG-N-FNQLRKLK----AANP-GLKVLWSFGGW------------TW---SGGFTQ-------------------AAAN---PTAFADSCYSL-------LNDPR-----WAGLFDGIDVD--WEYPNA--CG--LS------CDS-SGPQAFDRVVTALRDKFGS----------S----FLVTAAITADGSSGG--KIDA------TDYATAATKLSW-IMPMTYDYFGA-FNPQG--PTAPHSPLTSYPGIP-----------------QAGFN---------SEDA--VNKLIAKG-IPASKILLGVGFYG-RGWTGVTQSAPG----------------------GSA---------TG--AAPGT------------------------Y-E-AG-------IEDYKVLKNRCP--------------ATGT----VGGTAYAKC--GNEWWSYD--TPATIATKTAWARSKGLGGAFFWELSGD Clostridium_paraputrificum_2 FNATDLQ----WDSLTHIQYSFAMVDPSTN--KITLGD-------------------KHAAIEEDFTG----------------YDLSYKGKIVELDTS------------LPYK--GHFNVLQTMK----KSYP-DVDLLISVGGW------------AG---SRGFYT-------------------MLDTDAGINTFADSCVEF-------IRQYG---------FDGVDID--FEYPSATSQSGNPDDFDLSEPRRSKLNERYNILIKTLRQ-KIDEAAKAD--GKD----YLLTAAVTASPWV-----LGG------VSDNSYAKYLDF-LSVMSYDYHGG-WNE----YVEHLAGIYPNAEDR--------------ETVAQIMP--------TLCMD--WAYRYYRGVLPSEKILMGIPYYT-RGWENVQGGTNGLHG-----TSKTP------ASGKYN--------IWG-DDLDGDGN----------------------L-EPAG----ANPLWHVLNLMENDPN----------LKVYWDD----TSKVPYVWQNNEKVFLSFE--NEKSIDARLDYIKDKNLGGA???????? Clostridium_thermocellum_1 YEVSDIP----WDMVTHINYAFAKI------------------------------------------------EN-----GRIAIIDKWA--AIQKPFG----DDTWD---TPIR--GHFGQLIKYK----EQYP-HVKTLISVGGW------------TE---SK-YFS------------------DVALTEESRNTFADSCVEF-------IRTYR---------FDGVDID--WEYPVS---GGMP-----ENIRRPEDKQNFTLLLKCLRE-KLDAAGAED--GKH----YLLTIAAPAGSFN-----IKN------TEPEIYHQYLDF-INIMTYDYSGS-WEN----VANHLAPLYMNPNDP-------------S--YPERKEK--------FNVDWTVKEYLRLG-VPAEKINVGVPYYA-AGWQEVNGGINGLF--------GTS------SK-----------------PLSSTQFH-------------------------YI-------NSLLKSPDL-------------GFTRYWDE----YAMVPYLWNPESATFYSYE--DEISLKNKCDYVIENNLGGIMIWELSGD Vibrio_parahaemolyticus_5 YLVKDIP----WEQLTHINYAFVSIGSDG---KVNVGD----------------------------VNDPN--NA--------ATGKTWP-------------GVEVDPT-LGFK--GHFGALATYK----QKH--DVKTLISIGGW------------AE---TGGHFDANGDRVADGGFYTMTTNADGSINHAGIEKFAASAVEM-------MRKYK---------FDGLDID--YEYPTSMAGAGNPYDKDFMEPRRQYLWASYQELMKVLRE-KLDAASAQD--GTH----YMLTIAAPSSGYL-----LRG------METFDVTKYLDY-VNIMSYDLHGA-WND----HVGHNAALFDTGKDS-------------ELAQWNVYGTAAYGGIGYLNTDWAYH-YFRGS-MPAGRINIGVPYYT-RGWQGVTGGDNGLWGRAALPNQAEC------QPGTGE--GEKNNCGNGAIGIDNMWHDLDPQGREMGAGSNPMWHAKNLE-K-GI-------WGSYAQAYGLDPVNDPSDKLVGTYTRNYDS----VAVAPWLWNAEKGVFLSTE--DKASIEVKADYVIDKEIGGIMFWELAGD Vibrio_parahaemolyticus_71 YTVDNMP----ADNLTHILYGFIPICGP----NESVKSVG---------------GNSFNALQTACRGVPD--YE-------VVIHDPWA--AYQKSFPQA--GHEYS---TPIKG-N-YAMLMALK----QRNP-DLKIIPSIGGW------------TL---SDPFYD-------------------FVNK-ANRDTFVASVKKF-------LKTWK--------FYDGVDID--WEFPGG--GGAAADK-----GDPVNDGPAYVALMRELRA-MLDELEAET--GRT----YELTSAIGV-GYD----KIED------VNYADAVQYMDY-IFAMTYDFYGG-WNN----VPGHQTALYCGSFMRPGQCDGSGVDENGEAYKGPAYT---------ADNG--IQLLLAQG-VPANKLVLGTAMYG-RGWEGVHQDTLT-DP-------NDP------MTGTA----------TG--KLKGSTAQ-------------------GVW-E-DG-------VIDYKGIKSFMLGANN--TGINGFEYGYDA----QAEAPWVWNRTTGELITFD--DHRSVLAKGSYAKSLGLAGLFSWEIDAD Vibrio_vulnificus_72 YTVDNIP----AQNLTHILYGFIPICGP----NESVKSVG---------------GNSFNALQTACQGVPD--YE-------VVIHDPWA--AYQKSFPQA--GHQYS---TPIKG-N-YAMMMALK----QRYP-DLKIIPSIGGW------------TL---SDPFFD-------------------FVDK-KNRDTFVASVKRF-------LTTWK--------FYDGVDID--WEFPGG--DGAAPNL-----GDPARDGQAYVDLMRELRT-MLNELEAET--GRT----YELTSAIGV-GHD----KIED------VNYADAIQYMDY-IFAMTYDFYGG-WNN----VPGHQTALYCGNFMRPGQCDGTGVDENGVPYKGPAYT---------SDHG--IQLLLAQG-VPANKLVLGTAMYG-RGWEGVMPSTLR-DP-------NDP------MTGTA----------TG--KLKGSTAQ-------------------GVW-E-DG-------VIDYKGIKSFMLGPNS--TGINGFEYGYDD----QAEAPYVWNRTTGELITFD--DHRSVLAKGAYAKSLGLAGLFSWEIDAD ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;