NEXUS
[File created by TreeBASE:  1/16/09  15:37:48]
[Matrix accession#: M4077]

BEGIN TAXA;
	TITLE M4077;
	DIMENSIONS  NTAX=28;
	TAXLABELS
		Arabidodsis_thaliana_2	Arabidopsis_thaliana_1	Arabidopsis_thaliana_19	Arabidopsis_thaliana_21	Arabidopsis_thaliana_24	Arabidopsis_thaliana_3	Beta_vulgaris_22	Beta_vulgaris_23	Betula_pendula_27	Betula_pendula_28	Brassica_napus_20	Burkholderia_gladioli_5	Nocardiopsis_prasina_11	Oryza_sativa_14	Oryza_sativa_15	Phaseolus_vulgaris_25	Phytophthora_infestans_4	Picea_glauca_12	Saccharum_officinale_16	Streptomyces_coelicolor_7	Streptomyces_griseus_10	Streptomyces_lavendulae_6	Streptomyces_olivaceoviridis_9	Streptomyces_thermoviolaceus_8	Triticum_aestivum_13	Vigna_unguiculata_26	Zea_mays_17	Zea_mays_18
	;
END;

BEGIN CHARACTERS;
	TITLE M4077;
	DIMENSIONS NCHAR=719;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Arabidodsis_thaliana_2               AGAACTCTCTACGACCAAATCTTCATCC-ACAAGGACAACAACGCATGCC-CTGCAAAAGGTTTCTACCCCTATGAAGCTTTCGTGGAGGCTACAAGATCCTTCCCG------AAGTTCGGGAGCGTAGGAAACTTTTGGACAAGGCGACGCGAAGTGGCTGCGTTTTTGGCGCAGATATCTCACGAGACAACAGGTGG---TTGGGCCACGGCACCAGACGGACCATATGCGTGGGGATTGTGTTTTAAAGAGGAAGTGAGTCCACAG--AGTAATTATTGTGATGCTTCTAATAAGGAT---TGGCCTTGTGTTTCTGGCAAGTCTTACAAAGGAAGAGGTCCCATTCAACTATCTTGGAATTACAATTACGGACAGGCGGGTCGAGCATTGGGTTTCGACGGTTTACAGAACCCAGAACTTGTAGCCAACAACTCCGTTTTAGCTTTCAAGACAGCTCTTTGGTTTTGGATGACCGAAC---AGACTCCTAAACCGTCCTGCCATAACGTTATGGTCAACC-GATACAGACCGACGAAAGCAGATAGAGCAGCAAACCGGACTGTCGGTTATGGTTTAGTCACCAACATCATAAACGGCGGTTTAGAATGTGG----GATTCCAGGAGAT--GGACGGGTCACTGACCGGGTCGGGTATTTCCAAAGATACGCTCAGTTGTTTAAAGTCACCACAGGACCTAATTTAGACTGCGAG
		Arabidopsis_thaliana_1               ???TATCAATTCGAGA--ATCTATTCTCTAAGCGTAACAGTCCAGTGGCTCACGCCGTCGGCTTTTGGGATTACCGATCATTCATTACTGCGGCTGCCGAGTACCAGCCTCTTGGTTTCGGTACTGCTGGTGAGAAACTTCAAGGGATGAAGGAAGTCGCTGCGTTTCTTGGCCACGTTGGGAGCAAAACCTCATGCGGGTACGGGGTTGCAACAGG---CGGACCATTAGCTTGGGGATTGTGTTACAACAAGGAGATGAGT--CCTGATCAGCTTTATTGCGATGATTACTACAAATTGACATATCCTTGTACTCCTGGTGTCTCGTACCACGGTCGAGGAGCTTTACCGGTTTACTGGAATTACAATTATGGTCAAACCGGGGAGGCTTTGAAAGTGGATCTACTGAGTCATCCAGAGTATCTCGAGAACAATGCTACGTTAGCGTTTCAAGCGGCGATTTGGCGGTGGATGACGCCACCGAAGAAGCATTTACCGTCGGCGCACGATGTTTTCGTCGGAAAATGGAAGCCA-ACAAAGAATGACACTGCTGCAAAACGAACTCCGGGGTTTGGAGCCACCATAAACGTTCTTTACGGCGATCAAATCTGCAACA---GCGGATTCGATAACGATGAGATGAACAACATTGTTTCTCATTATTTGTATTATCTTGATCTGATAGGTGTTG-GACGAGAAGAAGCTGGTCCTCACGA
		Arabidopsis_thaliana_19              CCTGACTTCTTTAACTCTATACTAAACC-AAAGA------GGTGATTGTC-CTGGCAAAGGATTCTACACTCACGACACCTTCATGGCCGCAGCTAATTCTTACCCT------AGCTTCGG------T-G-----CTTCCATCTCCAAACGCGAAATCGCGGCGTTTTTCGCTCACGTAGCCCAAGAAACAGGGTTC-----ATGTGTTACATTGAG-----GAAATTGA--TGGACCAGCCAAGGCCGCATCCGGAGAG--T--ACTG--C----GACACAGAGAAACCAG---A----G---TTCCCATGTGCACAAGGAAAGGGCTACTATGGCCGTGGTGCAATCCAGCTCTCTTGGAACTACAACTACGGTCTCTGTGGCAAAGCCTTGGACGAGAACTTATTGGCTTCACCAGAGAAAGTTGCTCAAGACCAGGTTCTTGCCTTCAAGACCGCTTTCTGGTTCTGGACCACT---A---AT----------GTTC---GCACGAGT------T------------------TTAAATCG-----------------------GGCTT-TGGCGCAACAATCAGGGCAGTGAATAGTAG---GGAGTGTAGC---GGAGGAGATTCTACAGCCAAAGCCGCCAACAGGATTAAGTATTTCCAAGACTATTGTGGCAAGCTTGGAGTTGCACCTGGAGATAACCTCACTTGTTAA
		Arabidopsis_thaliana_21              CAAATTTTCTTTAACAACATTATCAACC-AAGCC--G-GTAATGGATGCG-CGGGAAAAAGTTTTTACACCCGGGACTCTTTCATTAACGCCACCAATACTTTCCCC------AGCTTTGC------------TAATACCGTTACTAGACGTGAAATTGCTACCATGTTTGCTCATTTCACTTACGAGACAGGACAC-----TTCTGCTACATAGAA-----GAGATAAA-CGGGGCGTCACG-T----------GTC----A--TGTG--C----GACCAG-AA-CAACAG-GCA----A---TATCCATGTGCACCGGCCAAGAGCTACCATGGCCGTGGTCCGCTCCTACTATCATGGAACTTCAACTATGGAGCATGCGGCCAGAGTCTCGGCTTAGACCTCCTACGCCAGCCCGAGCTGGTGAGTAGTAACCCAGTCGTGGCTTTCAGGACGGCTCTGTGGTTTTGGATGA---------AG--A---------GCG--TGAGGCCT----------------GTA------TTGA-ACC-A--------------------GGGATT-TGGAGCCACCATAAGAGCCATCAGCGGTT---TCGACTGTG------ACGGTAGGAACTTAGGTGGGGTGAACGCAAGGATTGGCTACTATAGAGACTATTGTGGGCAGCTTGGTTTGGACCCTGGCGCCAACATAACTTGCTAA
		Arabidopsis_thaliana_24              CAAGAATTCTTCAATGGAATCATCAGTC-AAGCC--GCG-TCTAGTTGCG-CCGGCAATAGATTTTACAGTCGGGGAGCTTTTCTTGAGGCCTTAGACTCATATTCT------CGTTTCGGTAGAGTTGGATCGACCGACGACTCTAGGCGTGAGATTGCAGCGTTCTTTGCTCATGTCACACATGAAACAGGACGTAAT--TTCTGCTACATAGAA-----GAGATAGA-CGGAGCC--TCA-AA--------GGAT----T--ACTG--C----GACGAG-AA--TGCAACACA----A---TATCCATGCAATCCTAACAAAGGCTACTACGGCCGCGGACCGATCCAACTCTCTTGGAATTTCAACTACGGGCCAGCCGGGACAGCAATTGGTTTCGACGGCCTGAATGCACCGGAAACAGTAGCCACGGATCCAGTCATATCCTTCAAAACCGCCTTGTGGTACTGGACCAAT-------AG--G--G-----TTCA--GCCTGTT-------------------A------TCTC-TCA-A---------------------GGTTT-TGGTGCAACAATCCGTGCCATTAACGGTGCTTTGGAGTGTG------ACGGGGCCAACACAGCCACCGTTCAAGCTAGAGTTCGTTACTACACGGATTATTGTCGTCAACTTGGCGTTGATCCTGGAAACAACCTCACTTGCTAA
		Arabidopsis_thaliana_3               ???TCTCAGTTCGATGATATGCTTAAGC-ATAGGAATGATGCCGCTTGTC-CTGCTAGAGGTTTCTACACTTACAACGCCTTTATCACCGCTGCAAAGTCCTTCCCC------GGTTTTGGCACCACCGGAGACACCGCCACGAGGAAGAAGGAGGTCGCCGCCTTCTTCGGCCAGACTTCCCATGAAACTACAGGTGG---ATGGGCTACAGCACCAGACGGACCATATTCATGGGGCTACTGTTTCAAGCAAGAACAGAAT--CCTG--CTTCAGACTAC-TGTGAACCGAGCGCCACG---TGGCCATGCGCATCTGGCAAACGCTACTACGGAAGAGGACCAATGCAACTGTCGTGGAACTACAATTACGGTCTATGCGGTAGAGCAATAGGAGTTGACTTACTCAACAACCCTGACCTTGTTGCCAACGACGCAGTGATCGCTTTCAAAGCCGCGATTTGGTTCTGGATGACTGCTC---AGCCTCCCAAACCGTCTTGCCATGCCGTGATAGCCGGCCAGTGGCAGCCTTCAGAC-GCCGACCGTGCCGCCGGGAGATTACCGGGTTATGGAGTGATTACGAACATCATTAACGGTGGATTGGAGTGTGG-----ACGTGGCCAAGACGGGAGAG-TCGCCGATCGTATAGGGTTTTATCAGAGGTATTGTAACATATTTGGTGTTAATCCTGGTGGTAATCTTGATTGTTAC
		Beta_vulgaris_22                     CAAGCATTCTTTGATGGGATTATAGGCC-AAGCT---GCTGCATCTTGTC-CTGGGAAAAACTTTTACACTCGCGCTGCTTTTCTTAGTGCGGTTGA-TCCTA-----------AGTTTGGAAACGAAGGTTCCAGTGATGATAACAAGAGAGAAATCGCTGCCTTCTTTGCTCATATCTCGCATGAGACTACCAAT-----TTGTGCCACATAGAA-GAGAGAGATGGAGATGTTGGTGAC------------GC-C----T--ACTG--C----GATCAAGACAAGGCAGCTCA----A---TACCCTTGCGCTGCAGGCAAGAAGTACTACGGGAGAGGACCTCTTCAACTGTCATGGAACTACAACTATGCTCTTGCAGGACAGGCGATTGGATTTGATGGTCTTGGAAACCCTGAAAAGGTGGCTACTGATGTTAATACATCTTTCAAGGCTGCAATGTGGTTTTGGATGACT-------AAT---------GTTCACTCCGTTAT---------------------------GAA--CCAA---------------------GGTTT-TGGAGCCACCACCAAAGCTATTAATGGCGCGCTTGAATGCA------ATGGCCAAAACCAGGATCAAGCCAATGACCGTATTCAGTTTTATAAGAAGTATTGTGCTGATTTTGGTGTTGCTCCTGGTGATAATCTTACATGTTAA
		Beta_vulgaris_23                     GATGCGTTCTTTAATAGGATCATTAACC-AAGCTA--GC-GCTAGCTGTG-CTGGTAAGAGATTCTACACCAGGGCTGCCTTTTTGAGTGCTCTCAGATTTTATCCC------CAGTTTGGTAG---TGGATCCTCCGATGTCGTTAGGCGTGAAGTTGCTGCATTCTTTGCCCATGTCACCCATGAAACTGGACAT-----TTTTGCTACATAGAG-----GAGATTG--CAAAGTC-AAC-------------C------T--ATTG--T--CAGTCAAG-----TGCAG--CA--------TTTCCATGCAACCCAAGTAAGCAATACTACGGAAGGGGGCCTCTTCAGATCACATGGAATTATAACTACATACCAGCTGGTCGAAGCATTGGATTTGATGGTCTGAATGCACCAGAAACAGTTGCCAACAATGCCGTGACTGCATTCCGGACAGCCTTCTGGTTTTGGATGAAC---A---AT----------GTCCACTCTGTTATC-----GT------------------CAATGGCCAA---------------------GGGTT-CGGGGCCAGCATTCGAGCTATCAATGGAA---TCGAATGTA------ATGGTGGTAACTCTGCTGCTGTTACTGCTCGTGTTGGGTACTATACTCAGTATTGTCAACAGCTTGGCGTTTCGCCAGGGAATAACCTCCGTTGCTAG
		Betula_pendula_27                    GCAGAATTCTTCAATGGGATACTCGATG-AGGCC---GATGCAAGTTGTG-CTGGAAAGAACTTTTTCACACGAGCAGCGTTTCTTGAAGCTCTCAATTCATTTAAT------GAATTTGGTAGGATTGGTTCGGTTGATGATTCTAAGCGCGAGATTGCAGCTTTCTTTGCCCATGTTACACATGAGACTGGACAC-----TTTTGCTATATAGAG-----GAGATAGA-TGGTGCC--TCCAA---------GGAC----T--ACTG--T----GACGAG---ACAAACACAGAA-------TATCCCTGCAACCCGGACAAAGGTTACTATGGCCGTGGACCAATTCAGCTATCATGGAATTTCAATTACGGACCAGCAGGAAAGAGTATTGGGTTCGACGGGTTAAACTCTCCTGAAACTGTCGCAAATGACCCT????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Betula_pendula_28                    CCGGATTTCTTTAATGGGATACTTAATC-AGGCCA---GTGGAGACTGTC-CAGGGAAGAGCTTCTACACCAGGGAAGCATTCCTTGATGCTCTTAAGTCGTATACT------CAGTTTGGCACTACTGATTCCGCTGATGATTCTAAGCGTGAGATTGCCGCTTTCTTCGCCCATGTCACGCATGAGACTGGATTT-----TTGTGCCATATAGAA-----GAGATAGA-TGGTGCT--TCCAA---------GGAC----T--ACTG--T---------AAA--CATACGGACACAGAG---TATCCATGCAACCCAAACAAAAATTACTATGGTCGTGGACCGCTTCAGCTATCCTGGAATTACAATTACGGAGCAGCCGGAAAGAGTATTGAATTCGACGGATTAAACTCTCCTGAAACT???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Brassica_napus_20                    CAAGCTTTCTTTAACGGTATTATCAATC-AAGCC--G-GTGGTGGTTGCG-CCGGGAAGAATTTCTACACCCGTGATTCTTTCATTAACGCCGCAAATACTTTCCCA------AACTTTGC------------CAATTCGGTTACTAGACGTGAAATTGCAACCATGTTTGCTCATTTCACCCACGAGACTGGACAT-----TTCTGCTACATAGAA-----GAAATAAA-CG--G---AGCT-TCACG-----TGAC----T--ACTG--C----GACGAG-AA-CAACAG-GCA----G---TACCCATGTGCACCAGGCAAAGGCTACTTCGGTCGTGGTCCGATTCAACTATCATGGAACTACAACTACGGAGCTTGTGGCCAGAGTCTCAACCTTAACCTCTTAGGCCAGCCCGAGCTAGTGAGTAGCAACCCAACTGTCGCTTTCAGGACGGGTCTGTGGTTTTGGATGAAT-------A-------------GC---GTAAGAC-------CG--------GTA------CTAA-ACC-A------A--------------GGGTT-TGGAGCCACCATTAGAGCCATCAATGGAA---TGGAGTGTA------ACGGTGGGAACTCAGGTGCGGTCAATGCAAGGATTAGGTACTATAGAGACTATTGTGGACAGCTTGGTGTGGATCCTGGTCCTAACCTTAGCTGCTAA
		Burkholderia_gladioli_5              GGCACCGATTTCCCGCTGAGCCGCGCGA-CCTTCGAGCA-GATGTTCCCGACCCGCAACAGCTTCTACACCTACGACGGCCTGGTCGGCGCGCTGAAGAGCTACCCC------GATTTCGCCGGCGAGGCCAGCCAGGACGTGCGCAAGCAGGAAATCGCGGCTTTCCTGGCAAACGTTTCGCATGAAACGGGCGGC-----CTGGTGTACATCCGC-----GAATCGAA-CCAGGCG-AACT-----------GGA--------ACAG--C----TACTGC-AG-CAGCGG--CA----A---TTG--CGGC-GGCAAGCA-----GTATTACGGCCGTGGCCCGATGCAACTGAGCTGGGACTACAACTACAAGGCCGCCGGCGATGCGCTGGGCCTGAACCTGCTCGGCAACCCGGATTGGGTGGCCACCGACGCGACGATCTCCTGGGCCACCGCGATCTGGTTCTGGATGACG---C---AA--TCGGGCGCCGGCA--CCATGACA------CC--------GCA------CCAG-GCC-ATGGC-CAGCGGCC------GCGGCTT-CGGCGAGACGATCCGCTCGATCAACGGCTCGCTCGAGTGCA------ACGGGCGCAATCCGGCCCAGGTGCAGAGCCGGGTCGATGCCTACAAGCGCTTCGTCGGCCTGCTCGGCACGACCACCGGCAGCGGCCCGACCGGCTGC
		Nocardiopsis_prasina_11              CCGAACGACTTCGTCGTCAGCGAGGCCC-AGTTCAACCA-GATGTTCCCGAACCGGAACCCCTTCTACACCTACTCGGGCCTCACCACCGCCCTGAGCTCCTACCCG------GGCTTCACCAACACCGGCAGCGTCGAGGTGCAGCGACGCGAGGCCGCGGCCTTCCTGGCCAACGTCAGCCACGAGACCGGCGGG-----CTGGTGTACATCAAG-----GAGATCAA-CGAGGAC-AACT-ACCC------GCAC----T--ACTG--C----GACCTG-AGCCAGCCCTTCG----G---CTGTCCGGCCGGCCAGTCCG--CCTACTACGGCAAGGGCCCGATCCAGCTGGCGTGGAACTACAACTACAAGGCCGCCGGTGACGCCCTCGGCATCGACCTGCTGAACAACCCCTACCTGGTCGAGCAGGACGCCTCGATCGCCTGGCGGACCGGACTCTGGTTCTGGAACACC---C---AG--TCCGGTGCCGGGA--CGATGTCG------GG--------GCA------CACC-GCC-ATCGT-CGACGGTC------ACGGCTT-CGGCGAGTCGATCCGCTCCATCAACGGCTCGATCGAGTGCA------ACGGCGGCAACCCCGGACAGGTGCAGAGCCGCATCAACACGTTCACCCAGTTCACCCAGATCCTCGGCACCACCACGGGGTCGAACCTGAGCTGCTGA
		Oryza_sativa_14                      GAGGCGTTCTTCAACGGGATCAAGAACC-AGGCC--CCG-AACGGCTGCG-CCGGTAAGAGCTTCTACACACGGCAATCGTTCCTGAACGCCGCCCGCTCCTACTCG------GGCTTCGCCAATGACCGCACCAACGACGACTCCAAGCGCGAGATCGCTGCCTTCTTCGCGCATGTCACACACGAGACTGGACAT-----ATGTGCTACATCAAT-----GAGATAAA-TGGGGCA-AACA-T---------GGAC----T--ATTG--T----GACAAG-AG-CAACAA-ACA----G---TGGCCGTGCCAGCCGGGCAAGAAGTACTACGGACGCGGGCCGCTGCAGATCTCATGGAACTTCAACTACGGGCCGGCGGGAAAGAACATCGGGTTCGACGGGCTAAGGGACCCAGACAAGGTGGCGCAGGACCCGACAATCTCTTTCAAGACGGCCCTCTGGTTCTGGATGAAC---A---A----------CGTGCA--CCAGGTG-------------------A------TGTC-GC------------A--G--------GGGTT-TGGCGCCACCATCCGGGCCATCAACGGTGCGCTCGAGTGCA------ACGGCAAGAACCCCGGTGCCGTCAACGCAAGGGTAAACTACTACAAGGACTACTGCCGCCAGTTCGGCGTCAGCCCGGGGGGCAACCTCTACTGTTGA
		Oryza_sativa_15                      GAGGCGTTCTTCAATGGGATCAAGAACC-AGGCC--CCG-AACGGTTGCG-CCGGCAAGAACTTTTACACACGACAGTCGTTTCTTAACGCTGCCCACTCCTACTCG------GGCTTCGCCAGGGACCGCACCAACGATGACTCCAAGCGTGAGATCGCTGCCTTCTTTGCCCACGTCACTCATGAGACCGGACAT-----ATGTGCTACATCAAC-----GAGATAAA-CGGGGCG-AGCA-T---------GGAC----T--ACTG--C----GACAAG-AA-CAACAA-GCA----G---TGGCCGTGCCAGCCGGGGAAGAAGTACTACGGGCGCGGGCCGCTGCAGATCTCGTGGAACTACAACTACGGGCCTGCGGGGCAGAACATCGGGTTCGACGGGCTGAGGGACCCGGACAGGGTGGCGCAGGACCCGACGATCTCCTTCAAGACGGCGCTCTGGTTCTGGATGAAC---A---A----------CGTGCA--CCAGGTG-------------------A------TGTT-GC------------A--G--------GGGTT-CGGCGCCACCATCCGGGCCATCAACGGTGCGCTCGAGTGCA------ACGGCAAGAACCCCGGCGCCGTCAACGCAAGGGTAAACTACTACAAAGACTACTGCCGCCAATTCGGCGTTGACCCGGGTGGCAACCTTTACTGTTGA
		Phaseolus_vulgaris_25                GCAGATTTTTTCAACGGCATAATTGATC-AAGCT---GATTCTGGTTGTG-CTGGCAAGAACTTTTACACAAGAGACGCTTTCCTCAGTGCTCTCAATTCCTACACT------GACTTCGGTAGAGTTGGTTCCGAGGATGACTCCAAACGCGAGATTGCAGCTGCTTTTGCCCATTTCACACATGAAACTGGACAT-----TTTTGCTACATCGAA-----GAGATAGA-TGGTGCA-AGC--A--A------GGAT----T--ACTG--C----GACGAGGAATCGATAGCACA----G---TATCCATGTTCTTCGAGCAAAGGGTACCACGGTCGTGGTCCGATCCAATTGTCTTGGAACTTCAACTATGGACCAGCAGGAAGTGCGAACAATTTCGACGGATTGGGCGCTCCAGAGACAGTGTCGAACGATGTTGTGGTGTCTTTCAAGACAGCATTGTGGTACTGGATGCAG---C---A----------CGTGCG--GCCTGTC-------------------A------TAAA-CC--A--------------------GGGCTT-CGGTGCAACCATCAGAGCCATCAATGGTGCACTCGAGTGTG------ATGGTGCCAACCCCACCACTGTTCAGGCTCGCGTTAATTACTACACAGAATACTGCAGACAATTGGGTGTTGCCACCGGTGATAATCTCACTTGCTAA
		Phytophthora_infestans_4             ???GCTCGCTTCTTCG--ATC-AGGATC-GTTTCCAGGA-GGTTTTCCCGGACGCTGTGGAGCTCTACAACTTCAACGGTCTTGTGGATGCGGCCAGCAAGTACAGC------GAATTCGCTAATACGGGCAACGACGACAATGACAAGCGTGAGCTGGCAGCGTTCCTGGCTCAAACAGCTCACGAGTGCGACAGC-----TTCAAGGCCGCGGAA-----GAGTACGC-CCGTGAC-ACCT-ACTCGGTGTGGCAG----T--ACTG--C----GACAAC-GC-CACCTACACG----T---GTGCCC--CCGGTC--GCCG---TTACCACGGCCGTGGCCCCATTCAGCTCTCATGGAACTACAATTACTACAATGCTGGCGAAGCTCTGGGCATTGATCTCTTAAACAACCCGGACATCGTCGCGACAGACACGACGGTGACGTGGATGACTGCGCTTTGGTACTGGATGACT---C---CG--CATGG---CGGCC--GTGTGAT-------C----------CA------CGAC-ATC-GTCGC-CGGTGAGA------ACGGATT-CGCTCAATCCACCGATATCATCAACGGTGGTCTGGAGTGCGGTCCGGACGCTCCCAACACGTCGAACGAGCAACAACGTATCACGTACTTCACCAAGATGTGCGAGGCTCTGGGCGTGGAGCCTCTGGGCGCCACCTCGTGCAAC
		Picea_glauca_12                      CAGAGTTTCTTCAATGGCCTTGCGGGTG-GAGCT---GGCAGCTCCTGCG-AGGGCAAGGGATTCTACACTTATAACGCTTTCATCGCAGCGGCCAATGCGTTTTCT------GGATTTGGCACCACCGGATCCAACGACGTCAAAAAGAGAGAACTGGCTGCCTTCTTCGCTAATGTAATGCACGAAACTGGAGGG-----TTGTGCTACATCAAC-----GAGAAGAACCC--TCC-AAT------------GAAG----T--ACTG--T--CAGAGTTC--A--AGCAC--------G---TGGCCGTGTACGAGCGGTAAGAGCTACCATGGACGTGGGCCTCTCCAGTTGAGCTGGAATTACAATTATGGAGCGGTTGGGAAGAGCATTGGGTTCGACGGGCTGAACAACCCAGAGAAGGTGGGGAAAGACCCCACCACCTCGTCCAAGACGGCCGTGTGGTTCTGGATGAAG---A---ATA----GAAACTGCCA--CTCCGCC-------------------A------TAACCTC--AGGG---A-------------AGGGTTTGGGTGGAACAATCAAAGCCATCAACAGCA---TGGAATGCA------ACGGCGGAAACAGTGGCGAAGTGAACAGCAGAGTGAACTACTACAAGAAAATATGTAGCCAGTTGGGTGTCGACCCTGGAGCCAATGTCTCCTGCTAA
		Saccharum_officinale_16              GACGCATTCTTCAACGGCATCAAGAACC-AGGCC--GGG-AACGGGTGCG-AGGGCAAGAACTTCTACACCCGGAGTGCGTTCCTAAGCGCCGCCGACTCGTACAAA------GGCTTCG------GTGGCGGGTCGGTGGAGGGCAAGCGCGAGATCGCCGCCTTCTTCGCGCACGTCACGCACGAGACCGGACAT-----TTCTGCTACATCAGC-----GAGATCAA-CAAGAAC-AAC------------GC-C----T--ACTG--C----GACTCG-AG-CAACAG-GCA----G---TGGCCGTGCGCCGCGGGACAGAAGTACTACGGGCGCGGCCCGCTGCAGATCTCGTGGAACTACAACTACGGGCCTGCCGGGAGGGACATCGGCTTCAACGGGCTCGGGGACCCCAACAGGGTGGCGCAGGACGCCGTGATCGCGTTCAAGACGGCGCTCTGGTTCTGGACGAAC---A---A----------CGTGCA--CCGGGTG-------------------A------TGTC-GC----------A--G----------GGGTT-CGGAGCCACCATCCGGGCTATCAACGGAGCCCTCGAGTGCA------ACGGAAACAACCCCGCCCAGATGAACGCGCGGGTGGGCTACTACAAGCAGTACTGTCAGCAGCTCGGCGTCGACCCGGGGCCCAACCTCACCTGCTAG
		Streptomyces_coelicolor_7            GCCGCCGAATTCGTGGTCAGCGAAGCCC-AGTTCGACCA-AATGTTCCCGAGCCGGAACTCCTTCTACACCTACAGCGGCCTCACCGCCGCGCTCAGCGCCTACCCG------GGGTTCTCGAACACCGGCAGCGACACCGTGAAGAAGCAGGAGGCCGCCGCCTTCCTCGCCAACGTCGGCCACGAGACCGGCGGG-----CTGGTGTACGTGGTG-----GAGCAGAA-CACCGCC-AACT-ACCC------GCAC----T--ACTG--C----GACGCG-TCCCAGCCGTACG----G---CTGCCCGGCCGGCAACGACA--AGTACTACGGGCGCGGGCCCGTCCAGCTGAGCTGGAACTTCAACTACAAGGCCGCCGGGGACGCCCTCGGCATCGATCTGCTCAACAACCCCGACCTGGTCCAGAACGACTCGGCCGTGGCCTGGAAGACGGGCCTGTGGTACTGGAACACC---C---AG--ACCGGACCCGGCA--CCATGACC------CC--------GCA------CGAC-GCC-ATGGT-CAACGGCG------CCGGGTT-CGGCGAGACCATCCGGTCCATCAACGGCAGCCTGGAGTGCG------ACGGGGGCAATCCCGGGCAGGTCCAGAGCCGGATCGACAACTACGAGCGCTTCACCCAGCTCCTCGGTGTCGAGCCCGGCGGCAACCTGAGCTGTTAG
		Streptomyces_griseus_10              AACAACGGCTTCGTCGTCAGCGAGGCCC-AGTTCAACCA-GATGTTCCCGAACCGGAACGCCTTCTACACCTACAAGGGCCTCACCGACGCCCTGAGCGCCTACCCG------GCTTTCGCCAAGACCGGCAGCGACGAGGTGAAGAAGCGCGAGGCCGCGGCCTTCCTCGCCAACGTCAGCCACGAGACCGGCGGA-----CTGTTCTACATCAAG-----GAAGTCAA-CGAGGCG-AACT-ACCC------GCAC----T--ACTG--C----GACACC-ACGCAGTCGTACG----G---CTGCCCGGCCGGCCAGGCCG--CCTACTACGGCCGCGGCCCGATCCAGCTGAGCTGGAACTTCAACTACAAGGCGGCCGGTGACGCCCTGGGCATCAACCTGCTCGCCAACCCCTACCTGGTGGAGCAGGACCCGGCCGTGGCGTGGAAGACCGGCCTCTGGTACTGGAACTCC---C---AG--AACGGCCCCGGCA--CCATGACC------CC--------GCA------CAAC-GCC-ATCGT-CAACAACG------CCGGCTT-CGGCGAGACGATCCGCTCGATCAACGGCGCTCTGGAGTGCA------ACGGCGGCAACCCGGCGCAGGTCCAGAGCCGCATCAACAAGTTCACGCAGTTCACCCAGATCCTCGGCACCACCACGGGTCCGAACCTGAGCTGCTGA
		Streptomyces_lavendulae_6            GCCGCCGCATTCCCCGTGAGCGAGGCCC-AGTTCAAGCA-GATGTTCCCGAAGCGGAACGCGTTCTATACGTACAAGGGCCTGGTCGCCGCGCTCAAGGCGTACCCG------GGCTTCGCGGGCACCGGCAGCGCCGAGGTCCGGAAGCAGGAGGCCGCCGCCTTCCTCGCCAACGTCGCCCACGAGACCGGCGGA-----CTGGTCTATGTCGTG-----GAGCAGAA-CACCGCC-AACT-ACCC------CCAC----T--ACTG--C----GACCGG-AGCCGGCCCTACG----G---CTGTCCGGCAGGCCAGGCCG--CCTACTACGGTCGCGGCCCGCTCCAGATCAGCTGGAACTTCAACTACAAGGCGGCGGGTGACGCCCTCGGCATCGACCTGCTCCACAACCCCTCGCTGGTGCAGAAGGACGCGGCCGTCTCCTGGAAGACCGGCCTGTGGTACTGGAACACC---C---AG--CGCGGCCCCGGCA--CCATGACC------CC--------GCA------CGAG-GCC-ATGGT-CAACCACC------GCGGCTT-CGGGCAGACCATCCGCAGCATCAACGGCGCCCTGGAGTGCG------ACGGCCACAACCCCGCCCAGGTCCAGAGCCGCGTCGCGAACTACCAGCGATTCACCAAGATCCTCGGCGTGGCGCCGGGCGGCAATCTCTCCTGCTGA
		Streptomyces_olivaceoviridis_9       GTCGGCACCTTCGTGGTGACCGAGGCCC-AGTTCAACCA-GATGTTCCCGAACCGGAACTCCTTCTACAGCTACAGCGGACTCACCGCCGCGCTCAGCGCCTACCCC------GGCTTCGCGAACACCGGCAGCGACACCACCAAGAAGCAGGAGGCCGCGGCCTTCCTCGCCAACGTCAGCCACGAGACCGGCGGC-----CTGGTGCACGTGGTC-----GAGCAGAA-CCAGGCC-AACT-ACCC------GCAC----T--ACTG--C----GACTGG-AGCCGGCCGTACG----G---CTGCCCGGCGGGCCAGGCGG--CCTACTACGGGCGCGGCCCGATCCAGCTCAGCTGGAACTTCAACTACAAGGCCGCGGGCGACGCGCTCGGCATCGACCTGCTGAACAGCCCCTGGCTGGTCGAGCGCGACTCGGCCGTCGCCTGGAAGACCGCGCTGTGGTACTGGAACACC---C---AG--ACCGGCCCCGGCA--CCATGACC------CC--------CCA------CAAC-GCC-ATGGT-CAACGGCG------CGGGCTT-CGGCCAGACCATCCGCTCCATCAACGGCTCCCTGGAGTGCG------ACGGCAAGAACCCGGCGCAGGTCCAGAGCCGCGTGAACAACTACCAGCGGTTCACCCAGATCCTCGGAGTCTCCCCGGGCGGCAACCTCTACTGCTGA
		Streptomyces_thermoviolaceus_8       CAGGCCAACTTCGTGGTCTCCGAAGCCC-AGTTCAACCA-AATGTTCCCGAACCGGAACCCGTTCTACACCTACCAGGGTCTGGTCGACGCGCTCAGCGCCTTCCCG------GGCTTCGCGAACACCGGTGACGACACGACGAAGAAGCAGGAGGCCGCCGCCTTCCTGGCCAACGTCAACCACGAGACCGGCGGC-----CTGCAGTACGTGGTC-----GAGCAGAA-CACCGCC-AACT-ACCC------GGCG----T--ACTG--C----GACTGG-AGCCAGCCGTACG----G---CTGCCCGGCCGGCCAGGACG--CCTACTACGGCCGCGGCCCCATCCAGCTGAGCTGGAACTTCAACTACAAGGCCGCGGGTGACGCGATCGGCGTGGACCTGCTGAACAACCCCTGGCTGGTCGAGAACGACCCGGCGATCGCCTGGAAGACCGGCCTGTGGTACTGGAACACC---C---AG--TCCGGCCCGGGCA--CCATGACG------CC--------CCA------CGAC-GCC-ATGGT-GAACCACG------CCGGTTT-CGGCCAGACCATCCGCTCCATCAACGGTTCCCTGGAGTGCG------ACGGCCGGAACCCGGCGCAGGTGCAGAGCCGCGTCGACGCCTACCAGCGCTTCACCTCCATCCTCGGGGTGGCCCCGGGCGACAACCTGTACTGCTGA
		Triticum_aestivum_13                 GACGCGTTCTTCGACGGGATCAAGTCCC-AGGCCGCCGACGGCGGGTGCC-CCGGCAAGAGCTTTTACACGCGCCAGTTTTTCCTGGACGGCGCCCAGGCGAACCCC------GACTTCGGGAAAGGCGGCACCAGCGACGACGGCAAGAGGGAGATAGCCGCCTTCTTCGCCCACTTCACCCACGAGACTGGATAC-----ATGTGCTACATCGAG-----GAGAAGGA-CGGGGCG-AGCC-A---------GAAC----T--ACTG--C----GACACG-AATTACCCG--CT----G---TGGCCGTGTACCTCGGGGAAGGCGTACTACGGGCGCGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGCAGAAGCTCGGCTTCAACGGGCTCGACAACCCGGAGAAGGTGGCGCAGGACCCGGCGTTGACGTTCCAGGCGGCGTTCTGGTTCTGGATGACC---A---A----------CGTGCA--TCAGGTCG-------------------------TGCC-GC-------------A-G--------GGGTT-CGGCGAGACGAGCAGGAAAATCAACAGTGGC---GAGTGCA------ACGGCGGGAACGCGCCGGCGATGAACGCGCGGGCGAACTACTACGTGGAGTACTGCAAGCAGTTCGGGGTCGACCCGGGGAACAACCTCACTTGCTAG
		Vigna_unguiculata_26                 GACGCATTTTTCAACGGCATAATCGATC-AAGCT---GATTCTGGTTGTG-TTGGCAAGAGCTTTTACGCAAGAGATGCTTTCCTCAGTGCTCTCGATTCCTACACC------GACTTTGGCAGAGTTGGTTCCGAGGATGACTCCAAGCGCGAGATTGCAGCTGCTTTTGCCCATTTCACACACGAAACTGGACAT-----TTTTGTTACATCGAA-----GAGATTGA-TGGTGCG-AGCA-----A-----GGAC----T--ACTG--C----GACGAGGATTCGATTGCACA----G---TATCCATGTTCTTCGAGCAGAGGGTAC-ACGGTCGT--CCCGATCCAATTGTCGTGGAACTTCAACTATGGACCAGCAGGGGAGGCTAACAACTTCGATGGATTGGGCCCCCCGGAAACAGTGTCGAACGATGTTGTCGTGTCTTTCAAGACAGCGTTGTGGTACTGGATGCAA---C---A----------CGTGCG--GCCTGTC-------------------A------TAAA-CC--A--------------------GGGGTT-CGCTGCAACCATCAGAGCCATCAATGGTCAACTCGAGTGTG------ATGGTGCAAACCCCTCTACTGTTCAGGCTCGCGTTAATTACTACACAGAATACTGCAGACAATTGGGTGTGGACACTGGTGATAATCTTACTTGCTAA
		Zea_mays_17                          GACGCGTTCTTCAACGGCATCAAGAACC-AGGCC--GGG-AGCGGGTGCG-AGGGCAAGAACTTCTACACCCGGAGCGCGTTCCTGAGCGCCGTCAACGCGTACCCG------GGCTTCGCCCATGGCGGGACGGAGGTGGAGGGCAAGCGCGAGATCGCCGCCTTCTTCGCGCACGTCACGCACGAGACCGGACAT-----TTCTGCTACATCAGC-----GAGATCAA-CAAGAGC-AAC------------GC-C----T--ACTG--C----GACGCG-AG-CAACAG-GCA----G---TGGCCGTGCGCGGCGGGGCAGAAATACTACGGGCGCGGCCCGCTGCAGATCTCGTGGAACTACAACTACGGGCCCGCCGGGAGGGACATCGGCTTCAACGGGCTCGCCGACCCCAACAGGGTGGCGCAGGACGCCGTGATCGCGTTCAAGACGGCGCTCTGGTTCTGGATGAAC---A---A----------CGTGCA--CGGTGTG-------------------A------TGCC-GC--A------------G--------GGCTT-CGGCGCCACCATCAGGGCCATCAACGGCGCCCTCGAGTGCA------ACGGGAACAACCCCGCCCAGATGAACGCGCGCGTCGGCTACTACAAGCAGTACTGCCAGCAGCTCCGCGTCGACCCAGGGCCCAACCTCATTTGCTAG
		Zea_mays_18                          AGCTCCTTCTTCAACGGCATCAAGAACC-AGGCC--GGG-AGCGGGTGCG-AGGGCAAGAACTTCTACACCCGGAGCGCGTTCCTGAGCGCCGTCAAGGGCTACCCA------GGCTTCGCCCATGGCGGGTCGCAGGTGCAGGGCAAGCGCGAGATCGCCGCCTTCTTCGCGCACGCCACGCACGAGACCGGGCAT-----TTCTGCTACATCAGC-----GAGATCAA-CAAGAGC-AAC------------GC-C----T--ACTG--C----GACCCG-AC-CAAGAG-GCA----G---TGGCCGTGCGCCGCGGGGCAGAAGTACTACGGGCGCGGCCCGCTGCAGATCTCGTGGAACTACAACTACGGGCCCGCGGGGAGGGCCATCGGCTTCGACGGGCTCGGGGACCCCGGCAGGGTGGCGCGGGACGCCGTGGTGGCGTTCAAGGCGGCGCTCTGGTTCTGGATGAAC-------AG---------CGTGCA--CGGGGTGG-------------------------TGCC-GC-------------A-G--------GGGTT-CGGCGCCACCACCAGGGCCATGCAACGCGCCCTCGAGTGCG------GCGGGAACAACCCCGCCCAGATGAACGCGCGCGTCGGCTACTACAGGCAGTACTGCCGCCAGCTCGGCGTCGACCCGGGGCCCAACCTCACCTGCTAG
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 719 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;