#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=11; TAXLABELS Equus_caballus_CEACAM1 Equus_caballus_CEACAM41 Equus_caballus_CEACAM42 Equus_caballus_CEACAM43 Equus_caballus_CEACAM45 Equus_caballus_CEACAM50 Equus_caballus_CEACAM53 Equus_caballus_CEACAM54 Equus_caballus_CEACAM19 Homo_sapiens_HsaCEACAM1 Homo_sapiens_HsaCEACAM3 ; END; BEGIN CHARACTERS; TITLE pferdTM; DIMENSIONS NCHAR=180; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Equus_caballus_CEACAM1 A---TGATCCAACACTAGGAAGTTCT-----------GGACTCTCA--GCTGGGG------------CTATTGGTGGCATCGTGATTGGAGTGCTGGCCG--GGGTCGCTCTGATAGCA---GCCCTGGTGT-ACTTTCTGTACATCAG-----AAAGACTGGAGG-------------- Equus_caballus_CEACAM41 C------------AGAAAAAAACACCACA--------GGCCTCCCT--GTGAGGG------------CCATTGCGTGCATCGTGATTGGGGTCCTGGTCG--GGGTGGTGCTAGTGGCT---GCCCTGGGGT-ATTTCCTGTTCCTTAC-----AAGGACTAGCAG-------------- Equus_caballus_CEACAM42 A---TGATCCAACACAAAGAAATTCTGCT--------GGCCTCTCA--GGTGGGG------------CCATTGGTGGCATCATGGTTGGAGTCCCAGCTG--TGGTAGCTCTGATAGCG---GTCCTGGTGT-ACTGCCTGTGTATGAG-----AAAGACTCGAGA-------------- Equus_caballus_CEACAM43 A---TGATCCAACACTAGGAAGTTCT-----------GGACTCTCA--GCTGGGG------------CTATTGGTGGCATCGTGATTGGAGTGCTGGCCG--GGGTCGCTCTGATAGCA---GCCCTGGTCT-ACTTTCTGTACATCAG-----AAAGACTTCAGG-------------- Equus_caballus_CEACAM45 A---TGCTCCAACACCAGGAAATTCTGCT--------GGCCTCTCG--GCTGGGG------------TCATTGACAGCATCGTGGTTGGAGTCCTGGCTG--GGGTAACTCTGGCA------GCTCCGCTTC-ACTTTCTTTATATCTG-----AAAGATTTGAGG-------------- Equus_caballus_CEACAM50 A---TGACCAAACA---------TCTGCT--------GGCCTCTCA--GCTGGGG------------CTGTTGGCGGCATCGTGGTTGGAGTCTTGGCTG--GGGTAGCTCTGATAGCA---GCACTGGTGT-ACAGTCGGTGTAGCAG-----AAAGGCTGAAGA-------------- Equus_caballus_CEACAM53 A---TGTTCCAACACAAGGAAATGCTGCT--------GGCCTCTCA--GCTGGGG------------CTATTGACGACATCATGGTTGGATTCCTGGCTG--GGATAGCTCTGAAG------GCTCCGGTGT-ACTTTCTGCACATTTA-----AAACATTAGAGA-------------- Equus_caballus_CEACAM54 A---TGATTC------AGGAAATTCTGCT--------GGCCTCTCA--GCTGGGGTCATTGACAGCATCATTGACAGCATCGTGGTCGGAGTCCTGGCCG--GGGTAGCTCTGATA------GCTCCGGTGT-ACTTTCTACATATCTG-----AAACATTGGACG-------------- Equus_caballus_CEACAM19 A-------AAAGCATCAGGAACTGCCCATTACACAACTGCCTATGAGTGCTGGGA------------TCATGGCCGCCATCATCATTGGATCTCTTGCTGCCGGGTCCCTCT----------TCATTGGCATCATTGCCTACATCCTGGTGACAAGAGGCTGGAGGAGCCAGAGCCACAG Homo_sapiens_HsaCEACAM1 ATAATGCTCTACCACAAGAAAAT--------------GGCCTCTCA--CCTGGGG------------CCATTGCTGGCATTGTGATTGGAGTAGTGGCCC--TGGTTGCTCTGATAGCAGTAGCCCTGGCAT-GTTTTCTGCATTTCGG-----GAAGACCGGCAG-------------- Homo_sapiens_HsaCEACAM3 A---------------AGAAAATGCCCCA--------GGCCTTCCT--GTGGGGG------------CCGTCGCCGGCATCGTGACCGGGGTCCTGGTCG--GAGTGGCGCTGGTGGCC---GCGCTGGTGT-GTTTCCTGCTCCTTGC-----CAAAACTGGAAG-------------- ; END; BEGIN TREES; Title pferdTM; LINK Taxa = Taxa; TRANSLATE [0] 1 Equus_caballus_CEACAM1, [1] 2 Equus_caballus_CEACAM41, [2] 3 Equus_caballus_CEACAM42, [3] 4 Equus_caballus_CEACAM43, [4] 5 Equus_caballus_CEACAM45, [5] 6 Equus_caballus_CEACAM50, [6] 7 Equus_caballus_CEACAM53, [7] 8 Equus_caballus_CEACAM54, [8] 9 Equus_caballus_CEACAM19, [9] 10 Homo_sapiens_HsaCEACAM1, [10] 11 Homo_sapiens_HsaCEACAM3; TREE Imported_tree_1 = ((((((1:0.01589922,4:0.01589922)1.0000:0.10482473,(3:0.11602725,6:0.11602725)0.4340:0.0046967)0.4340:0.02515057,(7:0.10613491,(5:0.0687302,8:0.0687302)0.7920:0.0374047)0.7640:0.03973962)0.7960:0.05753316,10:0.2034077)0.7720:0.05888285,(2:0.12906891,11:0.12906891)0.9920:0.13322163)0.0000:0.05454423,9:0.31683477); END;