#NEXUS [written Thu Dec 21 22:16:30 WIT 2017 by Mesquite version 3.3 (build 854) at NoPsechrids/192.168.1.118] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=51; TAXLABELS Rana_japonica_Raja01 Rana_japonica_Raja02 Rana_japonica_Raja03 Rana_japonica_Raja04 Rana_japonica_Raja05 Rana_japonica_Raja06 Rana_japonica_Raja07 Rana_japonica_Raja08 Rana_japonica_Raja09 Rana_ornativentris_Raor01 Rana_ornativentris_Raor02 Rana_ornativentris_Raor03 Rana_ornativentris_Raor04 Rana_ornativentris_Raor05 Rana_ornativentris_Raor06 Rana_ornativentris_Raor07 Rana_ornativentris_Raor08 Rana_ornativentris_Raor09 Rana_ornativentris_Raor10 Rana_ornativentris_Raor11 Rana_tagoi_Rata01 Rana_tagoi_Rata02 Rana_tagoi_Rata03 Rana_tagoi_Rata04 Rana_tagoi_Rata05 Rana_tagoi_Rata06 Rana_tagoi_Rata07 Rana_tagoi_Rata08 Rana_tagoi_Rata09 Rana_tagoi_Rata10 Rana_tagoi_Rata11 Rana_tagoi_Rata12 Rana_tagoi_Rata13 Rana_pirica_Rapitr1 Rana_pirica_Rapitr2 Rana_pirica_Rapitr3 Altirana_parkeri_NapaDRB1XM018558121 Xenopus_tropicalis_XetrNM001045794 Xenopus_laevis_XelaD13684 Xenopus_laevis_XelaD13688 Ambystoma_tigrinum_AmtiDAB0701DQ125480 Ambystoma_davidianus_AndaDAB0501KF611886 Ambystoma_mexicanum_AmmeDABB1021AF209115 Homo_sapiens_HosaDQBM33907 Rhinella_marina_RhmaDAB01KP995700 Rhinella_marina_RhmaDBB01KP995704 Rhinella_marina_RhmaDCB01KP995706 Quasipaa_spinosa_QuspKJ082083 Rana_catesbeiana_LicaBT081564 Rana_catesbeiana_Licatr1 Rana_catesbeiana_Licatr2 ; END; BEGIN CHARACTERS; TITLE Rana_MHCII_exon3; DIMENSIONS NCHAR=291; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Rana_japonica_Raja01 GTTAAACCAACGATCAGGATATCCCTAAGACAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACACACATGTTCCAAAATGGAGATTGGACCTTCCAGTTCTTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCATAGCAGCCTGGAGACACCAGCCAGAGTAGACTGGCAC Rana_japonica_Raja02 GTTAAACCAACGATCAGGATATCCCTAAGGCAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGTATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGATGTGGAGGAATCTGCCCAGGTTCAGTCTACACACATGTTCCAAAATGGAGATTGGACCTTCCAGTTCTTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTAGACTGGCAC Rana_japonica_Raja03 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCCTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGAACTGGCAC Rana_japonica_Raja04 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCCTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGAACTGGCAC Rana_japonica_Raja05 GTTAAACCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCATCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_japonica_Raja06 GTTAAACCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCATCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_japonica_Raja07 GTTAAGCCAACGATCAAGATATCACTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCCTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAAACTGCTCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATTCCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGTATTGGCAC Rana_japonica_Raja08 GTTAAACCAACGATCAGGATATCCCTAAGGCAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGTATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACACACATGTTCCAAAATGGAGATTGGACCTTCCAGTTCTTGGTAATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTAGACTGGCAC Rana_japonica_Raja09 GTTAAGCCAACGATCAAGATATCACTTATACAT------GAAGATCCCCATTCAGAGTACCACATGCTGGCCTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAAACTGCTCAGGTTCAGTCTACAGACATCCTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATTCCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTGTATTGGCAC Rana_ornativentris_Raor01 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor02 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor03 GTTAAGCCAACTATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor04 GTTAAACCAACGATCAGGATATCCCTAAGGCAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGTATGGTTTTTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGATGTGGAGGAAACTGCTCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTAGACTGGCAC Rana_ornativentris_Raor05 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGGTACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor06 GTTAAACCAACGATCAGGATATCCCTAAGGCAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGTATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGATGTGGAGGAAACTGCTCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCATCCAGAGTAGACTGGCAC Rana_ornativentris_Raor07 GTTAAGCCAAGTATCAAGATATCCCTCACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGCGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_ornativentris_Raor08 GTTAAGCCAAGTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_ornativentris_Raor09 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor10 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_ornativentris_Raor11 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_tagoi_Rata01 GTTAAACCGACTGCCAAGGTGTCCTTAATGCCACACTATGAAGAATCTAATACAGACCTTCAGTTGCTGGTGTGTAATGTGTTTGGCTACTACCCATCGAAGACAGAAGTAAAATGGTACCGGAATGGCCAGGAGGAAACAGCTCAGGTTGTGTCTACAGAGCCATTTCAGAATGGAGATTGGACATTCCAGGTCCTGGTGATGTTGGAGACAGATGTAAAGAAAGGAGATGTCTTCACCTGTGAGGTCCACCACATAAGCCTGGAGACACCAATGAGAATCGATTGGCGT Rana_tagoi_Rata02 GTTAAGCCAAGTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata03 GTTAAACCAACGATCAGGATATCCCTAAGGCAT------GAAGATCCCCATTCAGAGTATCACATGCTGGCGTGTAATGTGTATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACAGGAATGATGTGGAGGAAACTGCTCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTGCACAGCAGCCTGGAGACACCAGCCAGAGTAGACTGGCAC Rana_tagoi_Rata04 GTTAAGCCAACGATCAAGATATCCCTTATACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAACGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCATCCAGAGTGGATTGGCAC Rana_tagoi_Rata05 GTTAAGCCAAGTATCAAGATATCCCTCACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGTGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata06 GTTAAGCCAAGTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGTGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGCGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata07 GTTAAGCCAATTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGCGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata08 GTTAAGCCAAGTATTAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAGAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata09 GTTAAGCCAATTATTAAGATATCCCTTACACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGTGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCTCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata10 GTTAAGCCAAGTATTAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATCGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAGAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACAGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata11 GTTAAGCCAAGTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGTGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGCGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAGAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_tagoi_Rata12 GTTAAGCCAATTATCAAGATATCCCTTACACAT------GAAGATCCCCATTCGGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATGGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGTCTGGAGACACCAGCCAGAGTGGATTGGCAA Rana_tagoi_Rata13 GTTAAGCCAATTATCAAGATATCCCTCACACAT------GAAGATCCCCATTCAGAGCACCACATGCTGGTGTGTAATGTGAATGGTTTCTACCCATCGGAGATAGAAGTAAAATGGTACCGGAATAGTGTGGAGGAATCCGCCCAGGTTGTGTCTACAGACACCTTCCAAAATGGAGATTGGACCTTCCAGATCCTGGTGATGCTGGAGACCGAGATAACAAAAGGAGACACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_pirica_Rapitr1 GTTAAGCCAACGATCAAGATATCCCTTGGACAT------GAAGATCCCCATTTAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGCAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_pirica_Rapitr2 GTTAAGCCAACGATCAAGATATCCCTTGGACAT------GAAGATCCCCATTTAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGCAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Rana_pirica_Rapitr3 GTTAAGCCAACGATCAAGATATCCCTTGGACAT------GAAGATCCCCATTTAGAGCACCACATGCTGGCGTGTAATGTGAATGGTTTCTACCCATCTGAGATAGAAGTAAAATGGTACCGCAATGGTGTGGAGGAATCTGCCCAGGTTCAGTCTACAGACATCTTCCAAAATGGAGATTGGACCTTCCAAGTTCTGGTGATGCTAGAGACAGAGATAACAAAAGGAGATACCTTCACCTGTGAGGTCCTTCACAGCAGCCTGGAGACACCAGCCAGAGTGGATTGGCAC Altirana_parkeri_NapaDRB1XM018558121 GTGAAGCCAGCAGTCAAGGTTTCCCTAATGCCCGACTATGAAGATTCCCATTCGGAGCATCACATGCTGGTGTGCAATGTGCACGGTTTCTACCCATCGAAGATCGCCGTCAAATGGTACCGGAATAGCCAGGAGGAAAAATCTCAGGTTCAGTCTACAAACATCTTCCAAAATGGAGATTGGACCTTCCAGGTCCTGGTGATGCTGGAGACGGAGATAAAGAAAGGAGATAACTTCAGCTGTGAGGTCTATCACAGCAGCCTGGGAGCACCAATCAGAGTAGACTGGCAA Xenopus_tropicalis_XetrNM001045794 TCTCAACCCAATGTGAAGATTGTAAACTCAAAG------ACATTGGATTTGGAACATGAAAACCTGATAACCTGCTTTGTGGATGGGTTTTTTCCTCCGATGATAAAAGTAACTTGGCTGAAGAATGGGATTGAAGAGGGAGAGCAGGTCACATCCTCAGAGTTACTACCGAATGGAGACTGGACATTTGAAATCCATGTGATGCTGGAGACAACTATTAAACATGGGGACACTTTCACCTGCCGGGTAGAGCACAGCAGCCTGCAACAGCCTATATCTGTGAACTGGGAG Xenopus_laevis_XelaD13684 TCTCAACCCGATGTGAAGATTGTAAACACGAAG------ACACTGGATTTAGAACATGAAAATCTGATAACCTGCATAGTAGATGGGTTCTTTCCTCCAATGATAAAGGTGACTTGGCTGAAGAATGGGATTGAAGAGAGAGAACAAGTCACATCCTCAGCATTACTAAAGAATGGAGACTGGACATTTGAAATCCATGTGATGCTGGAGACAACCATTAAACATGGTGACACTTTCACCTGCCAAGTGGAGCACAGCAGCCTTCAACAACCTGTATCTGTGAACTGGGAA Xenopus_laevis_XelaD13688 TCTCAACCCAATGTGAAGATTGTAAACACAAAG------ACATTGGATTTGGAACATGAAAACCTGATAACCTGCTTTGTGGATGGGTTCTTTCCTCCTATGATAAAGGTGACTTGGCTGAAGAATGGGATTGAAGAAGGAGAACAGGTCACGTCCTCAGAGTTACTACAGAATGGAGACTGGACATTTGAAATCCATGTGATGCTGGAGACAACCATTAAACATGGCGACACTTTCACCTGCCGGGTGGAGCACAGCAGCCTTCAGCAACCTGTATCTGTGAACTGGGAG Ambystoma_tigrinum_AmtiDAB0701DQ125480 GTGAAGCCCAAAGTGAAAGTGTCTCGGTCGAAC------AACGAGGACCCGAACAAGCCGCATATGCTGATCTGCAACGTGATTGGCTTCTACCCATATGCCATCACTGTGCACTGGTACAAAAACGGGCAGAAGGACCCG---GGCGTGCTGTCCTCTGAGCTGATGCAGAACGGGGACTGGACCGGGCAGGTCATGGTCATGCTGGAGACCTCCATCAATCCTGGAGACACCTTTGTCTGTGAAGTCTTGCATGTGAGCCTGGATGAGCCCCTCAGGAGAAACTGGGAT Ambystoma_davidianus_AndaDAB0501KF611886 GTCATACCCAAAGTTCGAATTACTCCAACTAAA------ACCATGAGTCTGGATCACCAGACCATGCTGGTCTGCTACGTGGAAGACTTTTACCCGCCCGCAATTAACATCAGTTGGATCAAGAATGGGAAAGAGGAGACCGGCAGCGTCATGTCCACTGAGATGCTGCAGAACGGCGACTGGACGTATCAGATCCATCTGTTTCTGGAGACTACCCCGGAGCGAGGAGACACCTATGTCTGCCAAGTGGAGCACAGCAGCCTGAAGAGCCCCATCACCGTGGAGTGGAAG Ambystoma_mexicanum_AmmeDABB1021AF209115 GTGAAGCCCAAAGTGAAAGTGTCTCGGTCGAAC------AACGAGGACCCGAACAAGCCGCATATGCTGATCTGCAACGTGAATGGCTTCTACCCATATGCCATCACTGTGCACTGGTACAAAAACGGGCAGAAGGACCCG---GGCGTGCTGTCCTCTGAGCTGCTGCAGAACGGGGACTGGACCGGGCAGGTCATGGTCATGCTGGAGACCTCCATCAATCCTGGAGACACCTTTGTCTGTGAAGTCTTGCATGTGAGCCTGGATGAGCCCCTCAGGAGAAACTGGGAT Homo_sapiens_HosaDQBM33907 GTGGAGCCCACAGTGACCATCTCCCCATCCAGG------ACAGAGGCCCTCAACCACCACAACCTGCTGGTCTGCTCAGTGACAGATTTCTATCCAGCCCAGATCAAAGTCCGGTGGTTTCGGAATGACCAGGAGGAGACAACTGGCGTTGTGTCCACCCCCCTTATTAGGAACGGTGACTGGACCTTCCAGATCCTGGTGATGCTGGAAATGACTCCCCAGCGTGGAGACGTCTACACCTGCCACGTGGAGCACCCCAGCCTCCAGAACCCCATCATCGTGGAGTGGCGG Rhinella_marina_RhmaDAB01KP995700 GTTAAGCCTGAAATAGTCGTGTCCCTAATGCCTAATCATGAAGAGCCGAGAACCGTGCACCACATCCTGCAGTGTAACGTGTTTGGTTTCTACCCATCTGAGGTGGAGGTGAAATGGTACCGGAACGGCCAGGAGGAGACCGAGCTGGTTACATCTTCTGCGCTTTTTCAGAATGGAGATTGGTCTTTCAGAATTCTGGTGATGCTGGAGACCGAGATCCACAAAGGGGACACTTTTACCTGTGAGGTTCATCACATCAGCCTGGAGGCCCCGCACCGAGTAGACTGGCAC Rhinella_marina_RhmaDBB01KP995704 GTTGAACCATCGATCAAAATATCCTTGATGAATCAGTACGAAGAGTCACATACGAAGCAGCACATGCTGATATGTAACGTGTTTGGCTTCTACCCATCTGTGATTGAGGTGAAATGGTACCGGAACGGCCAGGAGGAGACCGAGCTGGTTCAGTCTACAGAGCCCTATCATAATGGGGATTGGTCTTACCAGATTCTGGTGATGCTGGAGACAGAGATTCAGAAAGGAGACACTTTTACCTGTGAGGTTCATCACAGCAGCCTGAAGGACCCGCACCGTGTAGACTGGCAC Rhinella_marina_RhmaDCB01KP995706 GTTCAACCATCAATCAAAATATCTTTGATGAATCAGTACGAAGACTCATATTCAAAGCAGCACATGCTAATATGTAACGTGTTTGGCTTTTACCCGTCTGAGATTGAGGTGAAATGGTATCGGAACGGCCAGGAGGAGACCGAGCTGGTTCAGTCTACAACGCCCTATCATAATGGTGACTGGTCTTTCCAAATTCTGGTGATGCTGGAGACAGAGATTCAGAAAGGAGACACTTTTACCTGTGAGGTCCATCACAGCAGCCTGAAGGACCCGCACCGCGTAGACTGGTAC Quasipaa_spinosa_QuspKJ082083 TCTGAACCCAGGATCAAGATTATCTATGCACAG------GCAACAGACCAGGAATATGAGGAAATATTGACCTGCTTTGTGGGCAGCTTTTTCCCCCCCATGATAAAAGTCACCTGGCTGAAGAATGGGGTGGAGGAATCTGAAAAGGTTACATCCACGGAGCTATTAAATGATGGGGACTGGACATACCAGATACATGTCAACCTGGAGACCACCATTCAGCATGGGGACGTTTTCACCTGTCGTGTGGAGCACAGCAGTTTGACCGCCCCCGCCAAAGTACAATGGAAA Rana_catesbeiana_LicaBT081564 GTTAAACCGACTGCCAAGGTGTCCTTAATGCCACACTATGAAGATTCTAATACAGACCTTCAGTTGCTGGTGTGTAATGTGTATGGCTACTACCCATCGAAGACAGAGGTAAAATGGTACCGGAATGGCCAGGAGGAA-CAGCTCAGGTTCAGTCTACAGAGCCCTTTCAGAATGGAGATTGGACATTCCAGGTCCTGGTGATGTTGGAGACAGATGTAAAGAAAGGAGATGTCTTCACCTGTGAGGTCCACCACATAAGCCTGGAGACACCAATGAGAATAGACTGGCGT Rana_catesbeiana_Licatr1 GTTAAACCGACTGCCAAGGTGTCCTTAATGCCACACTATGAAGATTCTAATACAGACCTTCAGTTGCTGGTGTGTAATGTGTATGGCTACTACCCATCGAAGACAGAGGTAAAATGGTACCGGAATGGCCAGGAGGAAACAGCTCAGGTTCAGTCTACAGAGCCCTTTCAGAATGGAGATTGGACATTCCAGGTCCTGGTGATGTTGGAGACAGATGTAAAGAAAGGAGATGTCTTCACCTGTGAGGTCCACCACATAAGCCTGGAGACACCAATGAGAATAGACTGGCGT Rana_catesbeiana_Licatr2 GTTAAACCGACTGCCAAGGTGTCCTTAATGCCACACTATGAAGATTCTAATACAGACCTTCAGTTGCTGGTGTGTAATGTGTATGGCTACTACCCATCGAAGACAGAGGTAAAATGGTACCGGAATGGCCAGGAGGAAACAGCTCAGGTTCAGTCTACAGAGCCCTTTCAGAATGGAGATTGGACATTCCAGGTCCTGGTGATGTTGGAGACAGATGTAAAGAAAGGAGATGTCTTCACCTGTGAGGTCCACCACATAAGCCTGGAGACACCAATGAGAATAGACTGGCGT ; END; BEGIN TREES; Title Rana_MHCII_exon3; ID 01607934514626; LINK Taxa = Taxa; TRANSLATE [0] 1 Rana_japonica_Raja01, [1] 2 Rana_japonica_Raja02, [2] 3 Rana_japonica_Raja03, [3] 4 Rana_japonica_Raja04, [4] 5 Rana_japonica_Raja05, [5] 6 Rana_japonica_Raja06, [6] 7 Rana_japonica_Raja07, [7] 8 Rana_japonica_Raja08, [8] 9 Rana_japonica_Raja09, [9] 10 Rana_ornativentris_Raor01, [10] 11 Rana_ornativentris_Raor02, [11] 12 Rana_ornativentris_Raor03, [12] 13 Rana_ornativentris_Raor04, [13] 14 Rana_ornativentris_Raor05, [14] 15 Rana_ornativentris_Raor06, [15] 16 Rana_ornativentris_Raor07, [16] 17 Rana_ornativentris_Raor08, [17] 18 Rana_ornativentris_Raor09, [18] 19 Rana_ornativentris_Raor10, [19] 20 Rana_ornativentris_Raor11, [20] 21 Rana_tagoi_Rata01, [21] 22 Rana_tagoi_Rata02, [22] 23 Rana_tagoi_Rata03, [23] 24 Rana_tagoi_Rata04, [24] 25 Rana_tagoi_Rata05, [25] 26 Rana_tagoi_Rata06, [26] 27 Rana_tagoi_Rata07, [27] 28 Rana_tagoi_Rata08, [28] 29 Rana_tagoi_Rata09, [29] 30 Rana_tagoi_Rata10, [30] 31 Rana_tagoi_Rata11, [31] 32 Rana_tagoi_Rata12, [32] 33 Rana_tagoi_Rata13, [33] 34 Rana_pirica_Rapitr1, [34] 35 Rana_pirica_Rapitr2, [35] 36 Rana_pirica_Rapitr3, [36] 37 Altirana_parkeri_NapaDRB1XM018558121, [37] 38 Xenopus_tropicalis_XetrNM001045794, [38] 39 Xenopus_laevis_XelaD13684, [39] 40 Xenopus_laevis_XelaD13688, [40] 41 Ambystoma_tigrinum_AmtiDAB0701DQ125480, [41] 42 Ambystoma_davidianus_AndaDAB0501KF611886, [42] 43 Ambystoma_mexicanum_AmmeDABB1021AF209115, [43] 44 Homo_sapiens_HosaDQBM33907, [44] 45 Rhinella_marina_RhmaDAB01KP995700, [45] 46 Rhinella_marina_RhmaDBB01KP995704, [46] 47 Rhinella_marina_RhmaDCB01KP995706, [47] 48 Quasipaa_spinosa_QuspKJ082083, [48] 49 Rana_catesbeiana_LicaBT081564, [49] 50 Rana_catesbeiana_Licatr1, [50] 51 Rana_catesbeiana_Licatr2; TREE Imported_tree_1 = (44:0.0774486,(42:0.19598,((48:0.15557064,(39:0.05560055,(38:0.03600301,40:0.02013734):0.00404857[%posteriorProbability = 0.485 ]):0.13127147[%posteriorProbability = 1 ]):0.05224815[%posteriorProbability = 0.92 ],((41:0.00528309,43:0.00180911):0.20410749[%posteriorProbability = 1 ],((45:0.11506634,(46:0.02592925,47:0.04775496):0.0551091[%posteriorProbability = 1 ]):0.0317852[%posteriorProbability = 0.995 ],((37:0.08271006,(21:0.01853928,(49:0.0,(50:0.0,51:0.0):0.00093897[%posteriorProbability = 0.77 ]):0.00958031[%posteriorProbability = 0.987 ]):0.10866318[%posteriorProbability = 1 ]):0.00711816[%posteriorProbability = 0.544 ],(((1:0.00449468,(2:0.00553889,8:0.00498742):0.00603164[%posteriorProbability = 0.742 ]):0.00989963[%posteriorProbability = 0.709 ],(15:0.00259901,(13:0.00351805,23:0.00349949):0.00090976[%posteriorProbability = 0.65 ]):0.01466177[%posteriorProbability = 0.99 ]):0.02261259[%posteriorProbability = 0.973 ],((29:0.01049296,(33:0.01249169,((27:0.00614956,31:0.00788553):0.00125652[%posteriorProbability = 0.174 ],(32:0.00864466,((28:0.00347268,30:0.00705363):0.00565077[%posteriorProbability = 0.516 ],((25:0.00388799,26:0.00312956):0.0043247[%posteriorProbability = 0.459 ],(16:0.0060667,(17:0.0018914,22:0.00161737):0.00095085[%posteriorProbability = 0.404 ]):0.00269284[%posteriorProbability = 0.256 ]):0.00092818[%posteriorProbability = 0.018 ]):0.00113367[%posteriorProbability = 0.025 ]):0.00087282[%posteriorProbability = 0.121 ]):0.00124468[%posteriorProbability = 0.035 ]):0.00091291[%posteriorProbability = 0.179 ]):0.02610791[%posteriorProbability = 0.998 ],((10:0.0,(11:0.0,(18:0.0,(19:0.0,(14:0.00350885,24:0.0):0.00000004[%posteriorProbability = 0.181 ]):0.00000002[%posteriorProbability = 0.071 ]):0.00000001[%posteriorProbability = 0.079 ]):0.00000001[%posteriorProbability = 0.194 ]):0.00682771[%posteriorProbability = 0.975 ],((34:0.0,(35:0.0,36:0.0):0.0[%posteriorProbability = 0.308 ]):0.01485792[%posteriorProbability = 0.998 ],((12:0.00150018,20:0.00200859):0.00425052[%posteriorProbability = 0.857 ],((5:0.0,6:0.0):0.00729594[%posteriorProbability = 0.992 ],((3:0.0,4:0.0):0.00563172[%posteriorProbability = 0.994 ],(7:0.00023748,9:0.00327129):0.01542091[%posteriorProbability = 0.997 ]):0.00498477[%posteriorProbability = 0.875 ]):0.00627579[%posteriorProbability = 0.847 ]):0.00268594[%posteriorProbability = 0.426 ]):0.00720738[%posteriorProbability = 0.617 ]):0.00913517[%posteriorProbability = 0.831 ]):0.00833776[%posteriorProbability = 0.568 ]):0.05496854[%posteriorProbability = 1 ]):0.0365266[%posteriorProbability = 0.982 ]):0.07412769[%posteriorProbability = 1 ]):0.01904947[%posteriorProbability = 0.469 ]):0.03963781[%posteriorProbability = 0.718 ]):0.0774486)[% ] [% ] [% setBetweenDouble = posteriorProbability ]; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 291; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 291; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 291; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1513862190863; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3758970039592847269; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8044898873539174155; mqVersion 330; checksumv 0 3 3181829926 null getNumChars 291 numChars 291 getNumTaxa 51 numTaxa 51 short true bits 15 states 15 sumSquaresStatesOnly 285464.0 sumSquares 285464.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 189; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1215 672; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3758970039592847269 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 01607934514626; toggleUseWeights off; endTell; setAssignedID 3548.1513861964555.6817904616362915033; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1026 600; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8044898873539174155 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1026 600; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;