#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=64; TAXLABELS Anabaena_variabilis_Cy.IPT Dictyostelium_discoideum_Am.IPT Nostoc_sp_PCC7120.Cy.IPT Pantoea_agglomerans_Ga.IPT Ralstonia_solanacearum_Be.IPT Rhodococcus_fascians_Ac.IPT Agrobacterium_vitis_Al.IPT1AGRVS Agrobacterium_tumefaciens_Al.IPTZAGRT5 Agrobacterium_tumefaciens_Al.IPTZAGRT7 Acaryochloris_marina_Cy.MIAA Agrobacterium_tumefaciens_Al.MIAA Agrobacterium_vitis_Al.MIAA Anabaena_cylindrica_Cy.MIAA Anabaena_variabilis_Cy.MIAA Aquifex_aeolicus_Aq.MIAA Bacillus_haodurans_Fi.MIAA Bacillus_megaterium_Fi.MIAA Bacillus_subtilis_Fi.MIAA Borrelia_burgdorferi_Sp.MIAA Brucella_melitensis_Al.MIAA Campylobacter_jejuni_Ep.MIAA Chlamydia_muridarum_Ch.MIAA Chroococcidiopsis_thermalis_Cy.MIAA Clostridium_perfringens_Fi.MIAA Coleofasciculus_chthonoplastes_Cy.MIAA Cylindrospermum_stagnale_Cy.MIAA Escherichia_coli_Ga.MIAA Fischerella_spab_Cy.MIAA Fusobacterium_nucleatum_Fu.MIAA Geitlerinema_sp_Cy.MIAA Haemophilus_influenzae_Ga.MIAA Helicobacter_pylori_Ep.MIAA Lactococcus_lactis_Fi.MIAA Listeria_innocua_Fi.MIAA Listeria_monocytogenes_Fi.MIAA Microcoleus_sp_Cy.MIAA Mycobacterium_tuberculosis_Ac.MIAA Neisseria_meningitidis_Be.MIAA Nodularia_spumigena_Cy.MIAA Nostoc_sp_PCC7120.Cy.MIAA Pantoea_agglomerans_Ga.MIAA Pantoea_ananatis_Ga.MIAA Prochlorococcus_marinus_Cy.MIAA Pseudanabaena_sp_Cy.MIAA Pseudomonas_putida_Ga.MIAA Ralstonia_solanacearum_Be.MIAA Rhodococcus_erythropsis_Ac.MIAA Rhodococcus_fascians_Ac.MIAA Rhodococcus_jostii_Ac.MIAA Rickettsia_conorii_Al.MIAA Sinorhizobium_meliloti_Al.MIAA Staphylococcus_aureus_Fi.MIAA Streptomyces_coelicolor_Ac.MIAA Synechococcus_elongatus_PCC6301.Cy.MIAA Synechocystis_sp_Cy.MIAA Thermosynechococcus_elongatus_Cy.MIAA Thermotoga_maritima_Th.MIAA Treponema_pallidum_Sp.MIAA Trichodesmium_erythraeum_Cy.MIAA Dictyostelium_discoideum_Am.MIAAb Dictyostelium_discoideum_Am.MIAAc1 Dictyostelium_discoideum_Am.MIAAc2 Saccharomyces_cerevisiae_As.MOD5 Schizosaccharomyces_pombe_As.MOD5 ; END; BEGIN CHARACTERS; TITLE Bacteria_Pfam_IPT_IPPT; DIMENSIONS NCHAR=297; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Anabaena_variabilis_Cy.IPT RLHIILGPTSTGKTDRSVVLAKQTKAPVIVLDRIQIYQELATGSGRPLIDELEGTTRIYLEERQLADGNLNTLESLSLTLQHIDRLSSQHKLLILEGGSISLCTALW-----------------KS----------------------------------------------------ENYQTTIEYV--KENEELYQSRLWRRMQNALISNPRRPSLIEELSRVWQDP-HKLAFVQTVVGYDVLIHWCQKYNLSPDQMWKSFQDNSFYINLIQEMFLAYIQYSQNQRKVFDQ---- Dictyostelium_discoideum_Am.IPT KILLIIGSTGVGKTDLSINYSKKYNAPVVVLDRIQCFPELSITSGRPDESEYFGSKRIYLTDLLVEPGNENIKKYVNKLINILNEIKD-TQGCIFEGGSISLLKELL-----------------TK----------------------------------------------------LPYKITCVIY--SDNHKLYKAKIFKRVSQMLFPTEENDSQILEVKRILNKG-KTVNA-------------------------------------------------------------- Nostoc_sp_PCC7120.Cy.IPT RLHIILGPTSVGKTDRSVVLAKQTKAPVIVLDRIQIYQEIATGSGRPLIDELEGTTRIYLEERQLADGNLNTLESLSLALQHIDRLSSQHKLLILEGGSISLCTALW-----------------KS----------------------------------------------------ENYQTTIEYV--KENEELYQSRLWRRMQNALISNPRRPSLIEELSRVWQDP-HKLALVRTVVGYDVLIHWCQKYGLSPDQMWKSFQDNSFYINLMQEMFLAYMQYSQNQRQAFDQ---- Pantoea_agglomerans_Ga.IPT NVYLLWGATTTGKTAFSVSVAKERGWSVIALDRFQGYHEISTGSGAPTNNELEKTERIYITQRGLADGIITAKDYNYWLKSRVLSLPEGKSDFIIEGGSVSLLKEMV-----------------SD----------------------------------------------------ADFLWEIKIF--RPSKDVFIKRAKRRITDMLHPEDGRPSIMDEVSSFFMNH-KTIHPLEDIDGYRTIIDYCRCKKIGFDKLKIMTTD--QEKIIISGIAEEYYAHALWQEQETPCFHSW Ralstonia_solanacearum_Be.IPT RLYLIWGATTTGKTAQSVALARSAGAPVISLDRVQCCHELAVGSGRPSPSELLGTRREYLCEREVSRGVVSAAEANQLLLDKVARYATQERALILEGGSVSLINAMI-----------------RD----------------------------------------------------ERGEWILRRI--PPGRAAFMAAARKRVREMLDPPPGQAGILDELQGLWGYP-RNHAVLEDIDGYRQIIRYANALQVPICRITSIDPN--AKALLIERIAQEYWEHALWQEQEFLGIASW Rhodococcus_fascians_Ac.IPT GVYAIVGATGIGKSAEASKLALSHSAPIVVADRIQCYSDLLVTSGRAFDAKVEGLNRVWLDNRTIHQGNFDPDEAFDRLIKVLTSYVDRGEAVVMEGGSISLILRFA-----------------QT----------------------------------------------------LPFPAVVNVM--PPDRQHYFAQQCARARQMLRGDSTGRNLLTELAEAWVLG-DQHNFIASVAGLDCVLDWCATHSVTPEELANRDLTTEVLDELAASMGGRYVEHGVLQQEIFLR--TF Agrobacterium_vitis_Al.IPT1AGRVS EAHLIFGPTSTGKTSVAIALAKRTGFPVIVLDRIQCYSQLSVGGGRPSAAEFQGTRRIYLIEGSLDEGVISAERAHECLVAAVEAHKP-EGGVILEGGSISLFKRMA-----------------QS----------------------------------------------------CGFTWHVTRL--HGGEEIFLAAAKKRINQMMQPDEQGNSFLGELVSVWKTT-ALRATLEGICGYRYAIEFAGKQGLEMDALTSLNRR--QLEQLVHGMAHEYLCYARQQEQELPL--PS Agrobacterium_tumefaciens_Al.IPTZAGRT5 LLHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLIFEVDWRKS-EEGLILEGGSISLLNCMA-----------------KS----------------------------------------------------SGFQWHVKRL--RGDSDAFLTRAKQRVAEMFAIREDRPSLLEELAELWNYP-AARPILEDIDGYRCAIRFARKHDLAISQLPNIDAG--RHVELIEAIANEYLEHALSQERDFP---QW Agrobacterium_tumefaciens_Al.IPTZAGRT7 DLRLIFGPTCTGKTSTAVALAQQTGLPVLSLDRVQCCPQLSTGSGRPTVEELKGTSRLYLDDRPLVKGIIAAKQAHERLMGEVYNYEA-HGGLILEGGSISLLKCMA-----------------QS----------------------------------------------------ADFRWHIIRH--EADEETFMNVAKARVKQMLRPAAG-LSIIQELVDLWKEP-RLRPILKEIDGYRYAMLFASQNQITSDMLLQLDAD--MEDKLIHGIAQEYLIHARRQEQKFPR--V- Acaryochloris_marina_Cy.MIAA GLIVICGPTATGKSSLALALARRLGAPILSADSRQVYRGFDIGTAKPSVTDQEDVPHYLIDICDPTE-TLTVADYQEQAQALIAQFHTEGQTPILVGGTGLYIRAIVEGLK-IPRVPPQL--ELRSQLQSQGQQIYQWLQQVDPPAAQKIHAHDQVRTLRALEVFYTTGIPLSAQQGKPSYP--ILQIGLDSDLDQHTDIIQQRTAAMV-----EQGWLTEVQKLIDHY-GVELPLLATLGYQEMKAYLHQ-------------QIT-LEEATAQTILHTRQFAKRQRTWFRANGIH Agrobacterium_tumefaciens_Al.MIAA DAILITGPTASGKSALALRLARERNGVVINADSMQVYDTLRVLTARPSDHEMEGVPHRLYGHVPAGS-AYSTGEWLRDISGLLSDLRGEGRFPVIVGGTGLYFKALTGGLSDMPAIPDDLREGLRARLIEEGAKLHAELVSRDPSMAQMLQPGDGQRIVRALEVLEATGKSIRDFQRAIDPE--RAQKFIVPERPVLHDRINRRFEAMM-----DSGAVEEVQALLALNLAPDATAMKAIGVAQIADMLTG-------------RMG-AAEVIEKSAAATRQYAKRQMTWFRNQG-- Agrobacterium_vitis_Al.MIAA DAILITGPTASGKSALALRLAAEVGGVVINADSMQVYDTLRVVTARPSEEDMQAVPHHLYGHVVAGA-AYSTGDWLRDVAVLLQDLQAQNRLPVIVGGTGLYFKALTGGLSDMPAIPEAVRVMLRQRERVEGASLHRDLTLRDPTVAARLDPRDGQRIIRALEVLEVTGQSISVFQTRIDPQ--RARKLVVPDRKLLHDRINRRFAMMM-----DEGAVEEVEALLAQNLSLDMPAMKAIGVSQIAAMLKG-------------EIS-REDVIEKSSAATRQYAKRQMTWFRNQNET Anabaena_cylindrica_Cy.MIAA KLIVICGATATGKSGLALSLARRLGSVIVSADSRQVYREFDIGTAKPTVEEQKLVPHYLVDICEPTE-IMTLADYQEQVQNLIANLG--VSPLLLVGGTGLYIRSIVQGMK-IPRVSPQP--ELRSQLESLGQQLYPMLQQVDAIAAQKIHANDLVRTLRALEVYYVTGIPISEQQGKPKYP--ILQICLDCDAERLDLRISRRTEQMI-----VDGLVSEVEYLSQKY-GADLPLLNTLGYQEIKQYLAG-------------EVT-LDEATELIALHTRQFAKRQRTWFRQSNLE Anabaena_variabilis_Cy.MIAA KLIVICGATATGKSGLALNLAMRLGSVILSADSRQVYREFDIGTAKPTLAEQKAVPHYLIDICTPRE-TMTVADYQEQAQALINSLP--VSPLLLVGGTGLYIRSIVQGMK-IPRVAPNY--ELRSQLESLGQTLYGILQQVDPVAAQKIHPHDPVRTLRAVEVFYVTGIPISAQQGEPDYP--ILQIGLDCEMERLSERIHKRTEQMI-----ADGLVGEVEYLCQKY-GADLPLLNTLGYQEIKQYLAG-------------EIS-LEAAKELIVLHTRQFAKRQRTWFRAYQIE Aquifex_aeolicus_Aq.MIAA KILVIGGPTAIGKSDLACCVAQKLNGEIISADSMAVYKFMDIGTAKP-LECMKKVPHHLIDVVEPGG-YFDAKIFEEMAKEKIEEIKRKGKVPIVVGGTYLYIQALLYGIDETPKPDWNLRNKLYEIARKKGNYLYEKLKAIDPKYAKKIHKNDLRRIVRALEVFINTGKPFSSFHSWPKMD--FVGIYLKRSPESLYKRIENRVYDMV-----KDGLLEEVKKLLEMGYENFLTSGQAIDYKEFVPCAKG-------------EKS-LEECIKEAIKNTKKQAKRQIRWFRKQWHE Bacillus_haodurans_Fi.MIAA KLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSE-SFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFN-LGDIDEDYRHELEAFVNSYGVALHDKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTGKTVTEQARHSPYN--LVMIGLTMERDVLYDRINRRVDQMV-----EEGLIDEAKKLYDRGIRD-CQSVQAIGYKEMYDYLDG-------------NVT-LEEAIDTLKRNSRRYAKRQLTWFRNKNVT Bacillus_megaterium_Fi.MIAA KLIVIIGPTAVGKTKLSIELAKQLDGEIISGDSMQIYKGMDIGTAKVSEEEMQGIPHYLIDIKEPDE-SFSVAEFQEIVRKQIDDIHARGKMPMIVGGTGLYIQSVIYDYQFTETPDEKVRERMEVFIKAHGIPLYEKLKEIDPDSAAAIHKNNHRRVIRALEVYEVTGKKFSDYTKELLYD--VSIIGLTMDRDVLYERINHRVDMMM-----QAGLLDEVKSLYESGLHD-VQSIQAIGYKELYAYFEG-------------RCT-LEEAVEQLKQNSRRYAKRQLTWFRNKPVK Bacillus_subtilis_Fi.MIAA PVVILVGPTAVGKTNLSIQLAKSLNAEIISGDSMQIYKGMDIGTAKITEQEMEGVPHHLIDILDPQD-SFSTADYQSLVRNKISEIANRGKLPMIVGGTGLYIQSVLYDYTFTEEADPVFRESMQMAAEREGAFLHAKLAAADPEAAAAIHPNNTRRVIRALEILHTSGKTMSQHLKELLYN--AVLIGLTMDRDTLYERINQRVDLMM-----QSGLLPEVKRLYDKNVRD-CQSIQAIGYKELYAYFDG-------------FVT-LSDAVEQLKQNSRRYAKRQLTWFRNKQVT Borrelia_burgdorferi_Sp.MIAA RVVFIFGPTAVGKSNILFH-FPKNKAEIINVDSIQVYKEFNIASSKPSKNLMKHIKHHLVDFLDPEK-DYTIGIFYEQALKIVKEIRQKKKIPIFVGGTAFYFKHLKDGFPSTPLVTSKIRIYVNNLLELKGKYLLKELKNVDPIRFNMLNKNDIYRIKRSLEVYYQTGIPISQFQKKEFKN--IVIIGLKRSFEDLKTRISIRINEML-----NSGLLSEIKGLFSKGYNENTPAFKGIGYNEFLLWKSR-------------PCYGLNDIIGLINKNSFLYAKRQMTFFAKIDVL Brucella_melitensis_Al.MIAA NAILIAGPTASGKSALAIRMAKATGGFIVNTDSMQVYGVLDLLTARPSRANLAEAEHFLYGHVPPSS-TYSTGKWFEDVEALLGRCELQGRVPIFVGGTGLYFRALLGGLSQTPEVSAQVRDHWRGRMEAEGAALHAVLCVRDPAIAAALQPSDSQRIVRALEVLESTGKSLLEWQKVVDD-QSAQKIVLRPDRAWLGERIARRFSAMW-----AEGAIDEVRALLALDLDPALPAMKAIGVREVSAFLAE-------------TMS-REEAIERSVIATRQYAKRQSTWFRNQ-LG Campylobacter_jejuni_Ep.MIAA FEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINIASAKPSQDDLASIKYFGVNLLSVNE-HFNVELFIREYQKAKEFALARNLPLIIVGGTGFYLKTMIDGLS-------------E-SKSSLNNEIYALLLNIDPNY--KIEKNDTYRLKKWLGIYEQTREIPSEFLKRVLKD--IEIYELAWDKEILKKRIKTRTKEML-----DNGLLDEAKILFSKF-DHKLKALNSIGLKECKEYLDG-------------EIS-FKELENLITIHTTQLAKRQRTFNKK-QSK Chlamydia_muridarum_Ch.MIAA TVILLAGPTGSGKTAVSLKLAPLVDGEIISVDSMQVYQGMDIGTAKVSLAIRQAVPHHLIDICHVQE-TFNAVDFYYHAIQACQDILSRNKVPILVGGTGFYFHTFLSGPPSGPSPDFALREQLSLEAQERGIALYQELVELDSAYAATITKHDKNKIIRALEIIRKTGNKVSSYSWEKEYH--CRGWLLSPDPELLRHNILERCDQML-----EEGLVDEVRSLVALGIKGNTSASRAIGYREWIEFLDAG-----------SPVERFEDTKQKFITNTWRYTKKQRTWFKR-PLF Chroococcidiopsis_thermalis_Cy.MIAA GLITICGATATGKSGLAITIAQRLNSVIISADSRQVYREFNLGTAKPTPSQQQLIPHYLIDICDPTE-TFTVAEYQEQAQGLIETLHATSLFPLLVGGTGLYIRSIVRGMK-IPRVAPQP--KLRSQLLSLGQQLYAMLQQVDPVAATKIHPNDPTRTVRALEVFYVTGRPISAQQGEPCYP--ILQIGLDCESNALTQRISQRTEQMV-----ADGLVAEVEYLCQKY-RMDLPLLNTLGYQEFKQYLAG-------------DIS-LEEAKELTVLHTRQFAKRQRTWFRAYQIE Clostridium_perfringens_Fi.MIAA NLLIIAGPTAVGKSDLSVDLAKKLNGEIISVDSMQIYKYMDIGSAKISKEEMGGIPHYLIDFVDPSK-EFSVAEFKDLTTEKIKDIQSRGKLPILVGGTGLYINSIICNMNFAESDDEEYREELEKIANEHGNYLHEMLKDIDLESYNSIHFNNRKRVIRALETYKLTGKPFSSFKAKTPYN--IYYYVLNMDRAKLYDRINKRVDIMF-----EKGLLEEVKNLKAMGLTDDMQSMKGIGYKEVLYYLDG-------------KIS-LEQCIEMIKQGSRNYAKRQLTWFRKDRAI Coleofasciculus_chthonoplastes_Cy.MIAA QLIVICGATATGKSGLALELAQRLNTVILSADSRQVYREFDIGTAKPSVAERQLVPHYLIDICAPTE-TLTVADYQEQAQELITSLH---SPLLLVGGTGLYIKAIVRGLK-IPRVAPNE--NLRSQLSGLGQQCYSFLQQVDPIAAEKIHPHDQVRTLRALEVFYITGRPISEQQGEPNYP--ILQIGLQQDADALTRRITQRTEMMV-----TAGLIEEVKTLVDKY-SWDLPLLDTLGYREMKHYLAG-------------DIS-LSEAKALTVVHTRQFAKRQRTWFRAYDIQ Cylindrospermum_stagnale_Cy.MIAA KLIVICGATATGKSGLAMLVAMRLDSIILSADSRQVYREFDIGTAKPTVAERNLVPHYLIDICEPTS-MMTVADYQEQVQALMTSSG--VSPLLLVGGTGLYIRSIVQGMK-IPRVAPQP--ELRSQLESLGQQLYAMLQQVDPVATQKIHAHDSVRTLRALEVYYVTGMPISAQQGEPNYP--ILQIGLECDVEKLGDRIYKRTQQMI-----ADGLVAEVEYLCQKY-GADLPLLNTLGYQEIKQYLAG-------------DIS-QEEAKELIILHTRQFAKRQRTWFRPYQIE Escherichia_coli_Ga.MIAA KAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQ-AYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWSLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTLPYQ--VHQFAIAASRELLHQRIEQRFHQML-----ASGFEAEVRALFARGLHTDLPSIRCVGYRQMWSYLEG-------------EIS-YDEMVYRGVCATRQLAKRQITWLRGWGVH Fischerella_spab_Cy.MIAA KLIVICGATATGKSGLALALAMRLDTVILSADSRQVYREFNIGTAKPTVDEQKLVPHYLIDICDPTE-TMNVADYQVQAQALI--------YPLLVGGTGLYIRSITQGMK-IPRVAPQQ--ELRSQLASLGQQLYAMLQQVDPVAAAKIHPNDSVRTLRGLEVFYVTGRPISEQQGEPSYP--ILQIGLDCDAAHLGDRIARRTEKMI-----ADGLVAEVEYLCQKY-GVDLPLLNTLGYQEIKQYLAG-------------DIS-LDKAKELTILHTRQFAKRQRTWFRASQIE Fusobacterium_nucleatum_Fu.MIAA KAIVIAGPTGVGKTKISIDLAKKLNAEIISSDSAQVYRGLNIGTAKIREEEKEGIKHHLIDIVEPVL-KYSVGNFEKDVNKILNQNS--EKNFLLVGGTGLYLNSVTNGLSILPEADKKTRE----YLTTLNNALLELALKYDEEATKEIHPNNRVRLERVVEVFLLTGQKFSELSKKNNFK--FLKIALERNRENLYDRINKRVDIMF-----AQGLVDEVKNLYKIY-GDKLYSLNIIGYNEIIDYINA-------------KIS-LDEAVYQIKLNSRHYAKRQFTWFKADEYQ Geitlerinema_sp_Cy.MIAA GLIVIAGPTATGKSSLAIALAQRFQTVILSADSRQVYREFDIGTAKPSLAEQQQAPHALLDICEPTE-TLTLADYQQRAQQHIARCHAVGMTPLLVGGTGLYIRAVVQGLK-IPRVPPQP--DLRSQLMSLGQHCYTLLQQVDPVAAARIHANDLVRTLRALEVFYVSGRTISEQQGEPSYP--ILQVALDAQPDLLARRIQQRTAQMM-----AGGFEAEVARLVEKY-GDGLPLLDTLGYQEMRQCLRG-------------EIS-RAEAEALTVLHTRQFAKRQRTWFRGDRIE Haemophilus_influenzae_Ga.MIAA TAIFLMGPTASGKTDLAIQLRSQLPVEVISVDSALIYKGMDIGTAKPSKEELALAPHRLIDILDPSE-SYSAMNFRDDALREMADITAQGKIPLLVGGTMLYYKALIEGLSPLPSADENIRAELEQKAAQQGWALHTELAKIDPISAARINPSDSQRINRALEVFYITGKSLTELTEELPYD--FVQFAIAQDRHVLHERIEQRFHKMI-----ELGFQAEVEKLYARGLNINLPSIRCVGYRQMWEYLQG-------------DYA-YEEMIFRGICATRQLAKRQLTWLRGWTPI Helicobacter_pylori_Ep.MIAA -------------------------AEIFSLDSLSIYKDINIASAKPSLKERKNIKHYALDHLNIDE-KNNAPLFKTLLEDAMRVSS--KEILLIVGGSSFYLKSILEGLSRMPKLSGEEVVKIEREIATLSNYIF--LKSIDPNMAFKIHPNDTYRTHKALEIFYATCTPPSEYFKAFEHA--ISLFALSIEKSALHNNIKRRTKNML-----HSGLVEEIKALYTQY-PKDSQPFKAIGVKESVLFLEK-------------RLT-LKELEEAITSNTMKLAKRQNTFNKTQNNL Lactococcus_lactis_Fi.MIAA NLLIIAGPTAVGKSDLSVDLAKKLNGEIISVDSMQVYQGLDIGTAKVTMAEQAQVPHHLIDVRKWTE-NFSVHDFVIEANQLIKEILDQGKVPIIVGGTGLYIQSLIEGYHLGGQENHEEMMKLREELSLLSDELFAKVIKINPDI----SELNRRRAIRFLELQTF-G-SQDEN---SDYD--FLLIGLNADRKVLYDRINQRVDQMM-----REGLLDEARTLYEQA-PE-VQAAKGIGYKEFFPYFSG-------------DIS-LEEAVELVKRNSRRYAKRQLTWFKNRSVE Listeria_innocua_Fi.MIAA PVIVIVGPTAVGKTSLSITLAKNFDGEIISGDSMQVYRGLDIGTAKITPEEMDGIKHYLIDVTDPAV-PFTAAKFQAETRGLIESIHNRGKLPIIVGGTGLYIQSVFYDYGFGNASEDKA---YRRELDQLDKTLWQMLDQLDPKSAELIHENNKRRVIRALEVIHLTGKPFSEYQVHEAYQ--PLFLGLDLDRELLYERINRRVELMF-----EEGLVSEASKLYDEHLVD-VPAIRGIGYKELFTYFDG-------------NSS-LEEAKELIQKNSRHFAKRQLTWFRNRDID Listeria_monocytogenes_Fi.MIAA PVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGLDIGTAKITPEEMDEIKHYLIDVTDPSE-PFTAAKFQTETRKWIETIHQAGKLPIIVGGTGLYIQSVFYDYDFGNVSEDKA---YRAELEQLNKLLWQMLEQQDPESAAQIHENNKRRVIRALEVMHLTGKPFSEYQVHDTYK--PLFLGLDLDRALLYERINQRVNLMF-----EEGLVTEAKKLYDQHLVD-VPAVCGIGYKELFPYFEG-------------KSS-LEEAKELIQKNSRHFAKRQLTWFRNREID Microcoleus_sp_Cy.MIAA GLITLCGATATGKSGLALALAQRLNSVIISADSRQVYREFDIGTAKPSAIERQQVPHYLIDICEPTQ-TMTLADYQLSAQELIAQFQARGTIPLLVGGTGLYIRAVVQGMK-IPRVAPHP--ELRSQLSSLGQQLYQYLQKVDPAAAQKIHANDEVRTLRALEVFYVTGRPISEQQGEPNYP--ILQIGLESNSNILTRRIEKRTEQMI-----VAGWEAEVKALCQKY-GIDLPLLDTLGYREMKQYLAG-------------EIS-LSQAKELTVLHTRQFAKRQRTWFRAYQIE Mycobacterium_tuberculosis_Ac.MIAA GARVSV--------------------EIVNADAMQLYRGMDIGTAKLPVSERRGIPHHQLDVLDVTE-TATVARYQRAAAADIEAIAARGAVPVVVGGSMLYVQSLLDDWS-FPATDPSVRARWERRLAEVGVRLHAELARRDPAAAAAILPTDARRTVRALEVVELTGQPFAASAPRPRWD--TVIVGLDCQTTILDERLARRTDLMF-----DQGLVEEVRTLLRNGLREGVTASRALGYAQVIAALDAG----------AGA-DMMRAAREQTYLGTRRYVRRQRSWFRRDRVH Neisseria_meningitidis_Be.MIAA KAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDMDIGTAKPSASERAFVPHHLIDIIPPTE-SYSAARFVEDCTRLVGEISSRGRFALIVGGTMMYFRALTQGLNDLPEADACLRADLDEQKQMYGLFLYRTLQKVDPETACRLKPNDSQRIGRALEVYYLTGKPMSTHLGSLPFD--LHTAALIENRARLHENIALRFHLML-----EQGFIGEVENLRRRYLTAYSPAIRCVGYRQAWKYLDG-------------KTD-FPAFVEKGIAATRQLAKRQLTWLRKT-PL Nodularia_spumigena_Cy.MIAA KLIVICGATATGKSGLALNLAMRLNSVILSADSRQVYREFDIGTAKPTLAERKLVPHYLIDICNPTD-IMTVADYQEQAQRLITELP--GAPLLLVGGTGLYIRSIVQGMK-IPRVAPDQ--ELRSQLQSLGQTLYGILQQVDAIAAQKIHPHDNVRTLRALEVFYITGRPISQQQGEPDYP--ILQIGLDCEVEKIRLRIHNRTEQML-----ADGLVAEVEYLCQKY-GADLPLLNTLGYQEIRQYLAG-------------EIS-LDSAKELTVLHTRQFAKRQRTWFKSSQIE Nostoc_sp_PCC7120.Cy.MIAA KLIVICGATATGKSGLALNLAMRLGSVILSADSRQVYREFDIGTAKPTLAEQRAVPHYLIDICAPRE-TMTVADYQEQAQALINSLP--VSPLLLVGGTGLYIRSIVQGMK-IPRVAPNY--ELRSQLASLGQTLYGILQQVDPIAAQKIHPNDPVRTLRAVEVFYITGIPISAQQGEPDYP--ILQIGLDCEMERLTERIHKRTEQMI-----TDGLVGEVEYLCQKY-GAELPLLNTLGYQEIKQYLTG-------------EIS-LEAAKELTVLHTRQFAKRQRTWFRASQIE Pantoea_agglomerans_Ga.MIAA KAIFLMGPTASGKTALAIELRKQLPVELISVDSALIYRQMDIGTAKPSAEELAVAPHHLLDIRDPAE-AYSAAEFRRDALAEMADIVEAGRIPLLVGGTMLYFKALLEGLSPLPSADPDVRQRIEQTAREKGWALHRQLCEIDPVAGSRIHPNDPQRLSRALEVFFISGKTLTELTKTLPYD--VQQFAIAASRELLHQRIALRFEQML-----ASGFEAESRALFARGLHSDMPSIRCVGYRQMWSYLSG-------------EID-YSEMVYRGICATRQLAKRQMTWLRGWNVH Pantoea_ananatis_Ga.MIAA KAIFLMGPTASGKTALAIELRKHLPVELISVDSALIYRQMDVGTAKPSAEERAQAPHRLLDIRDPAE-AYSAAEFRRDALAEMADIVQHGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRQKIEQMANERGWALHRQLCEIDPVAGSRIHPNDPQRLSRALEVFFISGKTLTELTKILPYD--VHQFAIAANRELLHQRIALRFDQML-----ASGFEAESRALFARGLHTDMPSIRCVGYRQMWSYLAG-------------EID-YDEMVYRGVCATRQLAKRQMTWLRGWNIH Prochlorococcus_marinus_Cy.MIAA LVIVLLGPTASGKTDLAIQIAKKIKVSIHNIDSRQLYKGMNIGTAKPTIEQQEEIKHYLLDLKDPNN-PITLHEFKKEAELSLKNIFSKEKCGFLVGGSGLYLKSLTSGLC-PPSVPAQE--KLRKEFRRLGQECHQILKKCDPIAWEKISPRDSIRTIRALEVFYSTGQTISSLKTLPDWN--L--LELGLDPRNLQQRIAKRTKILF-----QKGLIDETKALIHQY-GEDLPLLQTIGYKEACTVIKG-------------EYS-ITEAIEITTQRTNQFAKKQRTWFRRQNPK Pseudanabaena_sp_Cy.MIAA GLIVVLGATATGKTSIAIKLAQEFNLPIISADSRQVYRHFDIGTAKPSQTEQAAIPHFLIDIAEPDQ-TLTLAEYQQQAQALIANFHDQGITPILVGGSGLYLKSVIAGMH-IPRVAPQE--ELRAQLIALDQYCYRLLEQLDPISAAKINIHDRIRTIRALEIFYVTGKPRSQLEYNPAYP--ICQIGMKATIEQHRQWISNRVEWML-----NQGWLDEIQQIQARY-GDDLPLLKTLGYAEMSSYLAD-------------RLD-LATAKQQTIIHTCQFAKRQRTWFRGTNSF Pseudomonas_putida_Ga.MIAA PAIFLMGPTAAGKTDLAIELTTVLPCELISVDSALVYRGMDIGSAKPSKEVLAAHPHRLIDILDPAQ-SYSAAQFRADALEAMAEITARGKIPLLVGGTMLYYKALIDGLADMPAADATVRAELEAQAEALGLELHRQLAEVDPESAARIHPNDPQRLIRALEVYRVSGESMTAHRRRLPYT--VASLAIATDRHILHQRIALRFSQML-----EQGFVDEVRSLRARSLHAGLPSIRAVGYRQVWDYLDG-------------KLT-ENEMRERGIIATRQLAKRQFTWLRGWEVH Ralstonia_solanacearum_Be.MIAA RAVCLLGPTASGKTAAALALAERWPVEIISMDSALVYRDMDIGTAKPSRAEQAIAPHHLIDIIDPLD-AYSAAQFATDAQALIEAIRARGRLPLIVGGTMLYYKALTQGLSDLPGADPAIRAEIDAEAARDGWALHAKLAQVDPVTAARLHATDAQRIQRALELYRLTGQPMSALLARAAAA--YLSIALEADRAVLHARIAQRFDAML-----AGGLLDEVEALRRRGLSPVLPSIRCVGYRQAWAYLDG-------------EID-MATLREQGIAATRQLCKRQITWLRSTERR Rhodococcus_erythropsis_Ac.MIAA RPIAVVGPTASGKSDLALALAEEFGGEIINIDAMQLYRGMDIGTAKLTPAERRGIPHHLLDVLDVKE-TATVARYQSDAIAIAENLIAEGKVPVIVGGSMMYVQSLLDEWS-FPATDPDVRAKWEAVLADGGVAVHTALIAADPVAAASILPTDGRRMVRALEVVELTGLPFAASAPQPRWG--TRILGVDRDTEELDARIRLRTELMF-----SGGLVDEVAVLVEQGLREGVTAPRAIGYAQVLAHFDG-------------EYD-LAEALERTFIGTRRYVRRQRSWFRRDRVH Rhodococcus_fascians_Ac.MIAA RPIAVIGPTATGKSDLGLDLAETLGGEVVNIDAMQQYRGMDIGTAKLAPDDRRGIPHHRLDVLDVTE-TATVANYQSAAVRDVEDIIARGNVPVIVGGSMMYVQSLLDEWS-FPATDPDVRAKWEKVLADGGTVVHRELALKDPEAAASILATDGRRMVRALEVVEITGAPFAASAPTPRWG--TRVLGVDRETTELDERIARRTDLMF-----SAGLVDEVRALIDVGLKDGVTASRAIGYAQVLAFLDG-------------TSD-LDHARERTFIGTRRYVRRQRSWFRRDRVH Rhodococcus_jostii_Ac.MIAA VPIAVVGPTATGKSDLALDLAERLGGEIVNIDAMQLYRGMDIGTAKLAPAERRGIPHHQLDVLDVTE-TATVANYQQAAVRDVEGIAARGAVPVIVGGSMMYVQSLLDEWS-FPATDASVRARWEAVLAEKGVAVHAELGRVDPEAAASILPTDGRRLVRALEVVEITGKPFAASAPRPRWG--THIVGVDRDTAELDDRIRLRTRLMF-----ERGLVDEVRGLIDVGLREGVTAPRAIGYAQVLAWLDG-------------EYD-LDEAQERTFIGTRRYVRRQRSWFRRDRIH Rickettsia_conorii_Al.MIAA SIIILCGPTASGKSYLGHELAKAYNGEIINIDSMQVYKEIPIITASPPKSYKTEILYHLYNFLSMTE-DFSVIKYLKLATEKIKEITDRGKLPILIGGTGLYINSLVFGYNNIPDISEDLQEQVRNLHVKIGNELWSKLEKFDPLAASKINQNDTQRLIRAYEVFMQTGKSIFSFQTLSDFN--FKIIFLNPERKFLYKTCDERLDKIF-----KEGAIDEIALIKKQFAPKDYTNLKAVGIKEILAYLNG-------------NLT-LDEALNAAQIRTRQYAKRQVTWFKNQQDK Sinorhizobium_meliloti_Al.MIAA DAILITGPTASGKSALAVKLAQRHGGVVINADSMQVYGTLKVLTARPDQSEMGGVEHFLYGHIPPGR-AYSTGVWLREAEALVARLGKEGRLPVFVGGTGLYFKALTGGLSDMPEIPLETRKRLRTRLTEEGAALHGELSARDPETAGRVRPSDGQRIVRALEIIEATGRPIGSYQQSIDPA--RAQKIVVPERPVLHGRIDRRFETML-----ARGAVEEVRALLALRLPPEMPVMKAIGVPQIAAMLKG-------------EMS-EKQVIEAGAAATRQYAKRQMTWFRNQDET Staphylococcus_aureus_Fi.MIAA FIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPHHLIDILNPDD-TFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDETQLSIVKQKLSALEHLDNQLHDYLAQFDAVSAENIHPNNRQRVLRAIEYYLKTKKLLSNRKKVENYD--TLLLGIEMSRKTLYSRINKRVDIML-----DHGLFREVQQLVEQG-YESCQSMQAIGYKELIPVING-------------QMI-YEDAVNDLKQHSRQYAKRQMTWFKNKSVH Streptomyces_coelicolor_Ac.MIAA RVIAVVGPTAAGKSDLGVFLAQRLGGEVVNADSMQLYRGMDIGTAKLTPEERGGVPHHLLDIWDVTV-TASVAEYQRLARERIDALLAEGRWPILVGGSGLYVRGAVDNLE-FPGTDPGIRARLEEELELRGPALHARLAVADPEAARAILPSNGRRIVRALEVIEITGRPFTANLPGSVYD--TVQIGVDVARPELHERIALRVDRMW-----EAGLVDEVRALEAQGLREGRTASRALGYQQVLAALAG-------------ECT-LDEARAETVRATKRFARRQDSWFRRDRVH Synechococcus_elongatus_PCC6301.Cy.MIAA GLIVLCGPTAAGKSSLAIAIAQRLGSPILSADSRLVYRDFNIGTAKPTPAEQQQVPHYLMDLCDPRQ-VFTVGDYQDCAVPLIQQLQEKGMLPLLVGGTGLYIKAIVNGLR-FPRIAPQP--KLRSQLQALGQLCHALLQRVDPVAGDRIHVNDRVRTLRALEVFYVSGDRLTDLQQEPSYP--ILQIGLDSDR--LEARIQQRTQQML-----TSGFVEEVQGLCDRY-GSDLPLLNTLGYRQVCAFLQG-------------SLS-RSELPEQIVLQTRQYAKQQRTWFRADSIQ Synechocystis_sp_Cy.MIAA PLIVICGTTASGKSQLALDLAQRLNAVILGADSRQIYKELDIGTAKPTLGDRQTVPHYLIDICEPTE-NFTLAEYQRQAQELIASLN---QPILLVGGTGLYIQAIVKGLK-IPAVPPQT--NLREQLANLGQFCYQLLSQVDPVAQSKIEPADVVRTLRALEVFYATGRPISSLQGEPSYP--IVQIGLGLEPEQLQPRIVHRTHAMV-----EAGLVKEVEGLINQY-GEDLPLLHTLGYAEIKQYLQG-------------QIS-LTQATESIIVHTRQFAKRQRTWFRKDAIH Thermosynechococcus_elongatus_Cy.MIAA GLIVIGGATATGKTALAIALAQQLNSVILSADSRQVYRGFDIGTAKPTPAQQQQVRHHLIDICDPRE-TLTLAIYQAKAQALIAHYHAQGITPLLVGGTGLYIRSITQGLT-MPQVPPQP--HLRAQLMALGQECYQWLQQVDPVAAQRIHAHDQVRTLRALEVYYTTGVPLSQQQRRPPYR--IWYFALTGDRQQERCRIEARTQEML-----AMGWLDEIQQLQRQY-GEDLPLLDTLGYREMRQYLRG-------------EVT-LAEAIALTVQHTQQFAKRQRTWFRAEDIH Thermotoga_maritima_Th.MIAA KIAIVGGPTAVGKTDIMIEVCEEIGAEIISMDSRQIYRYMDIGTAKPTPEQRKRVLHHMIDIIDPDE-YYNAFMYRKDSLRAMEDVLRRGKIPVYVGGTGLYADALVRGIFEGVPADENIRKELR-ELERREPILRKMLEELDPEAATRIHPNDLKRTIRALEVYMKTGRRISELQKEGDDR--FFIIVLTRERYELYERINKRVDKMI-----EMGLVDEVKRLLGMGYSKDLNSMKTIGYKEVIDYLEG-------------KYD-FDKMVHLIKRNTRHFARRQIIWFKRYEAV Treponema_pallidum_Sp.MIAA DALVVLGATATGKTALAVALAQKYQGEIISADSRQVYRGLDVGTGKD-LALYGSVPYHLIDVCDPYE-EYNVFRFQQAVYGIVPSILRAHKVPIIVGGTGLYLDAVLRQYALVPVENQALRASLRG-ASLSHMAVYFSLKDSH-AVHNKTDLEDPARLMRAIEIAVFHATHPELLQQAPMMR--AKVYGIQYPRSMLRARIRARLEQRI-----RGGLIEEVAALHKGGVSWQRLEYFGLEYRFTAQYLQG-------------IIATRDEYVDLLFRAISRFAKRQETWFRRMRLG Trichodesmium_erythraeum_Cy.MIAA TLITICGPTATGKSGLALDLAHRLGSIILSADSRQIYKYFNIGTAKPTIKEQQLVSHYLIDICEPTE-ILTLAEYQKQAQSFIQSPGSQTDVTLLVGGTGLYIKAIVKGLK-IPRVGPNE--KLRSQLANLGQQCYKMLQQVDQVAVEKIHPNDVVRTLRALEVFYVSGKPISQQQGEPNYP--ILQIGLDCDVEVLGERIRDRTEKMV-----EVGLVEEVKCLCEKY-GEKLPLLNTLGYAEMKQYLAG-------------DIS-LAEAIKATVLHTRQFAKRQRTWFRGYEIE Dictyostelium_discoideum_Am.MIAAb LVVFVLGTTGVGKSKLAIELAKQFNGEIISSDSMQLYKDGDITTNKVTIEEMEGIPHHMMSFLPIDTLNYNVADFASKALGIIRDILSRGKLPIVVGGTHYYTCSLLN-------NN-------NKILEEEENYSYEILKEIDPIMAEKLHKNDIRKIKRSLDIYYTSGKKQSDLINDLRFR--SCLLWLEKDQSILEYRLNKRVDNMI-----ELGMLDEVFNIFKILENFSKGLTQAIGIKELYDYY------------------------------------------------ Dictyostelium_discoideum_Am.MIAAc1 KVIIIAGGTGIGKSDLSLKLAKQINGEIIGADSVQIYKHLTIASNKVT--DTNGIPHHLIDMLDLDDNNFCLFDYYRLAKNTIKDVLSRGRVPIVVGGCGFYLDTILKGSR-VDLTRDEIKLYYNKIKQEDNWYYYDLLKKYDIESANMILKNDFIRLSKSLYFNTVKGVKFSTQKDDNEYD--FRTFYLSGDRSKMHITLNNRCESMF-----KMGILEEVYDLLKRDHFKNSKSSESIGYRQIMDLLLKPVVTSINMNQSLNAID-ESDVISTIQTANRNYYRKQYSWFKKEYFE Dictyostelium_discoideum_Am.MIAAc2 KVIIIAGGTGIGKSDLSLKLAKQINGEIIGADSVQIYKHLTIASNKVT--DTNGIPHHLIDMLDLDDNNFCLFDYYRLAKNTIKDVLSRGRVPIVVGGCGFYLDTILKGSR-VDLTRDEIKLYYNKIKQEDNWYYYDLLKKYDIESANMILKNDFIRLSKSLYFNTVKGVKFSTQKDDNEYD--FRTFYLSGDRSKMHITLNNRCESMF-----KMGILEEVYDLLKRDHFKNSKSSESIGYRQIMDLLLKPVVTSINMNQSLNAID-ESDVISTIQTANRNYYRKQYSWFKKEYFE Saccharomyces_cerevisiae_As.MOD5 KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSE-EYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPVVYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNELKFD--TLFLWLYSKPEPLFQRLDDRVDDML-----ERGALQEIKQLYEYYEQCENGVWQVIGFKEFLPWLTGKT--------DDNTVK-LEDCIERMKTRTRQYAKRQVKWIKKM--- Schizosaccharomyces_pombe_As.MOD5 PLCVVIGTTGAGKSDLAVQLAKRFGSQVINADSMQIYRGFDTITNKITVEEQENVHHRLMSFLNFDK-EYSVPEFERDASRVIDEIHSQGKIPIVVGGTHYYLQSLLFEDTTLSAIDKLTNDSSDSHILDDDPAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHTGRPPSEIYSELRYK--SLIFWAFADSLVLMPRLDKRVDKML-----SHGLVDEIKSMKSLAD-FTRGIWQCIGFKEFMPWFEAP-----------SDIV-FNDCLERMKVSTRQYAKSQKKWIQS---- ; END; BEGIN TREES; Title Bacteria_Pfam_IPT_IPPT; LINK Taxa = Taxa; TRANSLATE [0] 1 Anabaena_variabilis_Cy.IPT, [1] 2 Dictyostelium_discoideum_Am.IPT, [2] 3 Nostoc_sp_PCC7120.Cy.IPT, [3] 4 Pantoea_agglomerans_Ga.IPT, [4] 5 Ralstonia_solanacearum_Be.IPT, [5] 6 Rhodococcus_fascians_Ac.IPT, [6] 7 Agrobacterium_vitis_Al.IPT1AGRVS, [7] 8 Agrobacterium_tumefaciens_Al.IPTZAGRT5, [8] 9 Agrobacterium_tumefaciens_Al.IPTZAGRT7, [9] 10 Acaryochloris_marina_Cy.MIAA, [10] 11 Agrobacterium_tumefaciens_Al.MIAA, [11] 12 Agrobacterium_vitis_Al.MIAA, [12] 13 Anabaena_cylindrica_Cy.MIAA, [13] 14 Anabaena_variabilis_Cy.MIAA, [14] 15 Aquifex_aeolicus_Aq.MIAA, [15] 16 Bacillus_haodurans_Fi.MIAA, [16] 17 Bacillus_megaterium_Fi.MIAA, [17] 18 Bacillus_subtilis_Fi.MIAA, [18] 19 Borrelia_burgdorferi_Sp.MIAA, [19] 20 Brucella_melitensis_Al.MIAA, [20] 21 Campylobacter_jejuni_Ep.MIAA, [21] 22 Chlamydia_muridarum_Ch.MIAA, [22] 23 Chroococcidiopsis_thermalis_Cy.MIAA, [23] 24 Clostridium_perfringens_Fi.MIAA, [24] 25 Coleofasciculus_chthonoplastes_Cy.MIAA, [25] 26 Cylindrospermum_stagnale_Cy.MIAA, [26] 27 Escherichia_coli_Ga.MIAA, [27] 28 Fischerella_spab_Cy.MIAA, [28] 29 Fusobacterium_nucleatum_Fu.MIAA, [29] 30 Geitlerinema_sp_Cy.MIAA, [30] 31 Haemophilus_influenzae_Ga.MIAA, [31] 32 Helicobacter_pylori_Ep.MIAA, [32] 33 Lactococcus_lactis_Fi.MIAA, [33] 34 Listeria_innocua_Fi.MIAA, [34] 35 Listeria_monocytogenes_Fi.MIAA, [35] 36 Microcoleus_sp_Cy.MIAA, [36] 37 Mycobacterium_tuberculosis_Ac.MIAA, [37] 38 Neisseria_meningitidis_Be.MIAA, [38] 39 Nodularia_spumigena_Cy.MIAA, [39] 40 Nostoc_sp_PCC7120.Cy.MIAA, [40] 41 Pantoea_agglomerans_Ga.MIAA, [41] 42 Pantoea_ananatis_Ga.MIAA, [42] 43 Prochlorococcus_marinus_Cy.MIAA, [43] 44 Pseudanabaena_sp_Cy.MIAA, [44] 45 Pseudomonas_putida_Ga.MIAA, [45] 46 Ralstonia_solanacearum_Be.MIAA, [46] 47 Rhodococcus_erythropsis_Ac.MIAA, [47] 48 Rhodococcus_fascians_Ac.MIAA, [48] 49 Rhodococcus_jostii_Ac.MIAA, [49] 50 Rickettsia_conorii_Al.MIAA, [50] 51 Sinorhizobium_meliloti_Al.MIAA, [51] 52 Staphylococcus_aureus_Fi.MIAA, [52] 53 Streptomyces_coelicolor_Ac.MIAA, [53] 54 Synechococcus_elongatus_PCC6301.Cy.MIAA, [54] 55 Synechocystis_sp_Cy.MIAA, [55] 56 Thermosynechococcus_elongatus_Cy.MIAA, [56] 57 Thermotoga_maritima_Th.MIAA, [57] 58 Treponema_pallidum_Sp.MIAA, [58] 59 Trichodesmium_erythraeum_Cy.MIAA, [59] 60 Dictyostelium_discoideum_Am.MIAAb, [60] 61 Dictyostelium_discoideum_Am.MIAAc1, [61] 62 Dictyostelium_discoideum_Am.MIAAc2, [62] 63 Saccharomyces_cerevisiae_As.MOD5, [63] 64 Schizosaccharomyces_pombe_As.MOD5; TREE Bacteria_Pfam_IPT_IPPT = ((7:0.46193658,(9:0.44337767,(8:0.39608801,(4:0.88348703,5:0.57762783):0.39207829):0.10613621):0.18758444):0.36539968,((1:0.01846009,3:0.02412456):0.8689184,(6:1.54458826,(2:0.73487757,((21:0.77806508,32:0.49163089):0.55780291,(19:0.90889505,(((61:0.00000001,62:0.00000001):1.25775206,(60:0.49767581,(63:0.56975198,64:0.63093352):0.1794129):0.3070287):0.13159721,((15:0.71320606,57:0.71811403):0.10251066,((29:0.73501817,(24:0.45983415,((33:0.59241511,(34:0.09442307,35:0.06572936):0.31233394):0.1017315,(52:0.60191421,(16:0.34036742,(17:0.20427369,18:0.27461975):0.06681834):0.12803307):0.05361929):0.08685342):0.04405821):0.08592044,(50:1.08344119,((43:0.74177418,(55:0.23432237,(59:0.18176189,(25:0.12654559,((36:0.12838762,(30:0.19397521,(54:0.38937111,(10:0.18876257,(44:0.49518,56:0.22158776):0.0718021):0.05576849):0.03328151):0.06755463):0.05630831,(23:0.13537619,(28:0.07989748,((13:0.13271857,26:0.08561798):0.0253663,(39:0.09636344,(14:0.00834719,40:0.03361736):0.04788281):0.05789116):0.01926038):0.04505248):0.05465576):0.04748116):0.07146373):0.12066814):0.20879049):0.32253282,((53:0.29608563,(37:0.18793512,(49:0.05629432,(47:0.1709467,48:0.11475827):0.05211823):0.09959281):0.2617953):0.41697277,((20:0.40039027,(51:0.24162995,(11:0.17316336,12:0.20707844):0.07124357):0.18550166):0.59711128,((22:0.91563662,58:1.61337679):0.14527184,((38:0.41980214,46:0.28256131):0.2010854,(45:0.22390824,(31:0.21629827,(27:0.03876986,(41:0.03256648,42:0.04327301):0.07944974):0.11831144):0.12714605):0.12007785):0.27648116):0.03921079):0.10563696):0.09373727):0.13271239):0.06703918):0.06600478):0.15689967):0.24828247):0.09230902):1.4733072):0.44502519):0.21116564):0.36539968); END;