#NEXUS
[written Mon Jun 04 12:43:05 CEST 2018 by Mesquite  version 3.5 (build 888) at kl-15168/10.0.1.34]

BEGIN TAXA;
	TITLE Untitled_Block_of_Taxa;
	DIMENSIONS NTAX=24;
	TAXLABELS
		Toxoplasma_gondii_TGME49226000 Chromera_velia_Cvel21479 Vitrella_brassicaformis_Vbra4892 Neospora_caninum_NCLIV046830 Hammondia_hammondi_HHA226000 Sarcocystis_neurona_SN300102655 Plasmodium_vivax_PVP010948300 Plasmodium_falciparum_PF3D71147700 Plasmodium_berghei_PBANKA0901400 Plasmodium_yoelii_PY17X0902800 Plasmodium_knowlesi_PKNH0945600 Plasmodium_chabaudi_PCHAS0702600 Theileria_annulata_TA12155 Theileria_parva_TP020253 Babesia_bovis_BBOVIII004400 Cryptosporidium_muris_CMU008960 Arabidopsis_thaliana_AT5G47030 Homo_sapiens_Hsa513 Mus_musculus_Mmu66043 Chlamydomonas_reinhardtii_XP001698736.1 Saccharomyces_cerevisiae_YDL004W Symbiodinum_minutum_symbB.v1.2.019144.t1 Symbiodinum_minutum_symbB.v1.2.029645.t1 Perkinsus_marinus_XP002785641.1 
	;

END;


BEGIN TREES;
	Title 'Trees from "3.F1delta.treb"';
	ID 0163ca64763216;
	LINK Taxa = Untitled_Block_of_Taxa;
	TRANSLATE
[0] 		1 Toxoplasma_gondii_TGME49226000,
[1] 		2 Chromera_velia_Cvel21479,
[2] 		3 Vitrella_brassicaformis_Vbra4892,
[3] 		4 Neospora_caninum_NCLIV046830,
[4] 		5 Hammondia_hammondi_HHA226000,
[5] 		6 Sarcocystis_neurona_SN300102655,
[6] 		7 Plasmodium_vivax_PVP010948300,
[7] 		8 Plasmodium_falciparum_PF3D71147700,
[8] 		9 Plasmodium_berghei_PBANKA0901400,
[9] 		10 Plasmodium_yoelii_PY17X0902800,
[10] 		11 Plasmodium_knowlesi_PKNH0945600,
[11] 		12 Plasmodium_chabaudi_PCHAS0702600,
[12] 		13 Theileria_annulata_TA12155,
[13] 		14 Theileria_parva_TP020253,
[14] 		15 Babesia_bovis_BBOVIII004400,
[15] 		16 Cryptosporidium_muris_CMU008960,
[16] 		17 Arabidopsis_thaliana_AT5G47030,
[17] 		18 Homo_sapiens_Hsa513,
[18] 		19 Mus_musculus_Mmu66043,
[19] 		20 Chlamydomonas_reinhardtii_XP001698736.1,
[20] 		21 Saccharomyces_cerevisiae_YDL004W,
[21] 		22 Symbiodinum_minutum_symbB.v1.2.019144.t1,
[22] 		23 Symbiodinum_minutum_symbB.v1.2.029645.t1,
[23] 		24 Perkinsus_marinus_XP002785641.1;
	TREE 'PAUP 1+' = ((((((((1:0.0,5:0.0):0.03387,4:0.03796):0.12295,6:0.16434):0.091,((2:0.18,3:0.17294):0.02349,(22:0.16578,24:0.18261):0.03271):0.04158):0.04969,((((7:0.01473,11:0.01124):0.0302,8:0.04772):0.018,((9:0.0087,10:0.00429):0.00236,12:0.00413):0.06317):0.2516,16:0.32):0.01573):0.0143,((13:0.02252,14:0.02293):0.21224,15:0.24869):0.06299):0.06228,23:0.37671):0.03625,((17:0.30276,(18:0.06506,19:0.07184):0.26255):0.00994,20:0.31724):0.0,21:0.32134)[% ] [%unrooted = on ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1528108985321;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 370826264870304465;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #370826264870304465 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #370826264870304465;
				getWindow;
				tell It;
					useTargetValue off;
					setTargetValue ;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #370826264870304465  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 0163ca64763216;
					toggleUseWeights off;
				endTell;
				setAssignedID 2101.1528108981931.2681520309446396651;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;