#NEXUS
[written Mon Jun 04 13:14:14 CEST 2018 by Mesquite  version 3.5 (build 888) at kl-15168/10.0.1.34]

BEGIN TAXA;
	TITLE Untitled_Block_of_Taxa;
	DIMENSIONS NTAX=30;
	TAXLABELS
		Toxoplasma_gondii_TGME49249720 Chromera_velia_Cvel13917 Chromera_velia_Cvel17295 Vitrella_brassicaformis_Vbra14129 Neospora_caninum_NCLIV065850 Hammondia_hammondi_HHA249720 Eimeria_tenella_ETH00023385 Sarcocystis_neurona_SN303800130 Plasmodium_vivax_PVP010106100 Plasmodium_falciparum_PF3D70705900 Plasmodium_berghei_PBANKA0803500 Plasmodium_yoelii_PY17X0806200 Plasmodium_knowlesi_PKNH0104400 Plasmodium_chabaudi_PCHAS0803800 Theileria_annulata_TA15215 Theileria_parva_TP020804 Babesia_bovis_BBOVIII004620 Cryptosporidium_muris_CMU016520 Tetrahymena_thermophilia_NP149381.1 Arabidopsis_thaliana_AT2G07671 Homo_sapiens_Hsa516 Mus_musculus_Mmu11951 Chlamydomonas_reinhardtii_XP001701531.1 Saccharomyces_cerevisiae_Q0130 Symbiodinum_minutum_symbB.v1.2.011430.t1 Symbiodinum_minutum_symbB.v1.2.019162.t1 Symbiodinum_minutum_symbB.v1.2.000251.t1 Symbiodinum_minutum_symbB.v1.2.000714.t1 Perkinsus_marinus_XP002782804.1 Perkinsus_marinus_XP002772709.1 
	;

END;


BEGIN TREES;
	Title 'Trees from "6.F0c.treb"';
	ID 0163ca6546e922;
	LINK Taxa = Untitled_Block_of_Taxa;
	TRANSLATE
[0] 		1 Toxoplasma_gondii_TGME49249720,
[1] 		2 Chromera_velia_Cvel13917,
[2] 		3 Chromera_velia_Cvel17295,
[3] 		4 Vitrella_brassicaformis_Vbra14129,
[4] 		5 Neospora_caninum_NCLIV065850,
[5] 		6 Hammondia_hammondi_HHA249720,
[6] 		7 Eimeria_tenella_ETH00023385,
[7] 		8 Sarcocystis_neurona_SN303800130,
[8] 		9 Plasmodium_vivax_PVP010106100,
[9] 		10 Plasmodium_falciparum_PF3D70705900,
[10] 		11 Plasmodium_berghei_PBANKA0803500,
[11] 		12 Plasmodium_yoelii_PY17X0806200,
[12] 		13 Plasmodium_knowlesi_PKNH0104400,
[13] 		14 Plasmodium_chabaudi_PCHAS0803800,
[14] 		15 Theileria_annulata_TA15215,
[15] 		16 Theileria_parva_TP020804,
[16] 		17 Babesia_bovis_BBOVIII004620,
[17] 		18 Cryptosporidium_muris_CMU016520,
[18] 		19 Tetrahymena_thermophilia_NP149381.1,
[19] 		20 Arabidopsis_thaliana_AT2G07671,
[20] 		21 Homo_sapiens_Hsa516,
[21] 		22 Mus_musculus_Mmu11951,
[22] 		23 Chlamydomonas_reinhardtii_XP001701531.1,
[23] 		24 Saccharomyces_cerevisiae_Q0130,
[24] 		25 Symbiodinum_minutum_symbB.v1.2.011430.t1,
[25] 		26 Symbiodinum_minutum_symbB.v1.2.019162.t1,
[26] 		27 Symbiodinum_minutum_symbB.v1.2.000251.t1,
[27] 		28 Symbiodinum_minutum_symbB.v1.2.000714.t1,
[28] 		29 Perkinsus_marinus_XP002782804.1,
[29] 		30 Perkinsus_marinus_XP002772709.1;
	TREE 'PAUP 1+' = ((((((1:0.003,6:0.00303):0.05966,5:0.06383):0.0436,8:0.13461):0.07005,7:0.18035):0.02593,((15:0.04479,16:0.0411):0.15101,17:0.19387):0.01956):0.00253,(((2:0.10005,3:0.10117):0.09122,4:0.15027):0.03582,((19:0.36338,(((20:0.20393,23:0.2652):0.02119,((21:0.05223,22:0.05071):0.1557,24:0.1744):0.04348):0.10433,(25:0.07274,27:0.07114):0.30378):0.03117):0.05874,((26:0.11462,28:0.06038):0.10329,(29:0.0012,30:0.10664):0.09331):0.06687):0.02849):0.01506,((((9:0.02597,13:0.02857):0.07513,10:0.0976):0.02421,((11:0.0097,12:0.00848):0.02163,14:0.02988):0.0932):0.08876,18:0.27623):0.04385)[% ] [%unrooted = on ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1528110854986;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 2815431166240900501;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #2815431166240900501 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #2815431166240900501;
				getWindow;
				tell It;
					useTargetValue off;
					setTargetValue ;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #2815431166240900501  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 0163ca6546e922;
					toggleUseWeights off;
				endTell;
				setAssignedID 2515.1528109032623.8826211094671754899;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;