#NEXUS
[written Mon Jun 04 13:05:27 CEST 2018 by Mesquite  version 3.5 (build 888) at kl-15168/10.0.1.34]

BEGIN TAXA;
	TITLE Untitled_Block_of_Taxa;
	DIMENSIONS NTAX=15;
	TAXLABELS
		Toxoplasma_gondii_TGME49310360 Chromera_velia_Cvel5582 Neospora_caninum_NCLIV054440 Hammondia_hammondi_HHA310360 Eimeria_tenella_ETH00000145 Plasmodium_vivax_PVP010314800 Plasmodium_falciparum_PF3D70719100 Plasmodium_berghei_PBANKA0616600 Plasmodium_yoelii_PY17X0619300 Plasmodium_knowlesi_PKNH0314500 Plasmodium_chabaudi_PCHAS0618300 Theileria_annulata_TA06630 Theileria_parva_TP010962 Babesia_bovis_BBOVIV008130 Cryptosporidium_muris_CMU009020 
	;

END;


BEGIN TREES;
	Title 'Trees from "8.ASAP-1.treb"';
	ID 0163ca78a69563;
	LINK Taxa = Untitled_Block_of_Taxa;
	TRANSLATE
[0] 		1 Toxoplasma_gondii_TGME49310360,
[1] 		2 Chromera_velia_Cvel5582,
[2] 		3 Neospora_caninum_NCLIV054440,
[3] 		4 Hammondia_hammondi_HHA310360,
[4] 		5 Eimeria_tenella_ETH00000145,
[5] 		6 Plasmodium_vivax_PVP010314800,
[6] 		7 Plasmodium_falciparum_PF3D70719100,
[7] 		8 Plasmodium_berghei_PBANKA0616600,
[8] 		9 Plasmodium_yoelii_PY17X0619300,
[9] 		10 Plasmodium_knowlesi_PKNH0314500,
[10] 		11 Plasmodium_chabaudi_PCHAS0618300,
[11] 		12 Theileria_annulata_TA06630,
[12] 		13 Theileria_parva_TP010962,
[13] 		14 Babesia_bovis_BBOVIV008130,
[14] 		15 Cryptosporidium_muris_CMU009020;
	TREE 'PAUP 1+' = (((((1:0.04196,4:0.03839):0.0785,3:0.17544):0.07932,5:0.19273):0.04965,(((6:0.03358,10:0.03987):0.09512,(7:0.11666,((8:0.0,9:0.0):0.0206,11:0.02459):0.10085):0.02635):0.08455,((12:0.03322,13:0.04521):0.16567,14:0.17373):0.04424):0.03757):0.03426,2:0.42688,15:0.34514)[% ] [%unrooted = on ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1528110327272;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 4738704856676928031;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #4738704856676928031 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #4738704856676928031;
				getWindow;
				tell It;
					useTargetValue off;
					setTargetValue ;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #4738704856676928031  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 0163ca78a69563;
					toggleUseWeights off;
				endTell;
				setAssignedID 5608.1528110302358.2522364689000595618;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;