#NEXUS [written Mon Jun 04 12:47:00 CEST 2018 by Mesquite version 3.5 (build 888) at kl-15168/10.0.1.34] BEGIN TAXA; TITLE Untitled_Block_of_Taxa; DIMENSIONS NTAX=21; TAXLABELS Toxoplasma_gondii_TGME49268830 Chromera_velia_Cvel16485 Vitrella_brassicaformis_Vbra23050 Neospora_caninum_NCLIV037520 Hammondia_hammondi_HHA268830 Eimeria_tenella_ETH00032380 Eimeria_tenella_ETH00017665 Sarcocystis_neurona_SN300500200 Plasmodium_vivax_PVP010828400 Plasmodium_falciparum_PF3D70311800 Plasmodium_berghei_PBANKA0409800 Plasmodium_yoelii_PY17X0412300 Plasmodium_knowlesi_PKNH0830600 Plasmodium_chabaudi_PCHAS0410700 Theileria_annulata_TA02515 Theileria_parva_TP030055 Babesia_bovis_BBOVIII003520 Cryptosporidium_muris_CMU026200 Symbiodinum_minutum_symbB.v1.2.008811.t1 Perkinsus_marinus_XP002775812.1 Perkinsus_marinus_XP002775398.1 ; END; BEGIN TREES; Title 'Trees from "10.ASAP-3.treb"'; ID 0163ca6808a729; LINK Taxa = Untitled_Block_of_Taxa; TRANSLATE [0] 1 Toxoplasma_gondii_TGME49268830, [1] 2 Chromera_velia_Cvel16485, [2] 3 Vitrella_brassicaformis_Vbra23050, [3] 4 Neospora_caninum_NCLIV037520, [4] 5 Hammondia_hammondi_HHA268830, [5] 6 Eimeria_tenella_ETH00032380, [6] 7 Eimeria_tenella_ETH00017665, [7] 8 Sarcocystis_neurona_SN300500200, [8] 9 Plasmodium_vivax_PVP010828400, [9] 10 Plasmodium_falciparum_PF3D70311800, [10] 11 Plasmodium_berghei_PBANKA0409800, [11] 12 Plasmodium_yoelii_PY17X0412300, [12] 13 Plasmodium_knowlesi_PKNH0830600, [13] 14 Plasmodium_chabaudi_PCHAS0410700, [14] 15 Theileria_annulata_TA02515, [15] 16 Theileria_parva_TP030055, [16] 17 Babesia_bovis_BBOVIII003520, [17] 18 Cryptosporidium_muris_CMU026200, [18] 19 Symbiodinum_minutum_symbB.v1.2.008811.t1, [19] 20 Perkinsus_marinus_XP002775812.1, [20] 21 Perkinsus_marinus_XP002775398.1; TREE 'PAUP 1+' = (((((1:0.01032,5:0.0158):0.04461,4:0.0608):0.13995,8:0.23085):0.06109,6:0.32148):0.01117,((2:0.27906,3:0.27023):0.00806,(19:0.26427,(20:0.04389,21:0.03804):0.2316):0.0398):0.02473,((7:0.34405,((15:0.06416,16:0.0651):0.20642,17:0.2583):0.05969):0.01904,((((9:0.04734,13:0.05023):0.10907,(11:0.03392,(12:0.02923,14:0.03021):0.00542):0.12231):0.03129,10:0.20189):0.13938,18:0.38553):0.01813):0.00577)[% ] [%unrooted = on ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1528109220070; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5919307068129846399; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #5919307068129846399 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #5919307068129846399; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 392; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5919307068129846399 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0163ca6808a729; toggleUseWeights off; endTell; setAssignedID 3036.1528109214107.3786276091632170365; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 392; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;