#NEXUS
[written Mon Jun 04 12:48:07 CEST 2018 by Mesquite  version 3.5 (build 888) at kl-15168/10.0.1.34]

BEGIN TAXA;
	TITLE Untitled_Block_of_Taxa;
	DIMENSIONS NTAX=21;
	TAXLABELS
		Toxoplasma_gondii_TGME49223040 Chromera_velia_Cvel1249 Vitrella_brassicaformis_Vbra17670 Neospora_caninum_NCLIV006060 Hammondia_hammondi_HHA223040 Eimeria_tenella_ETH00038660 Sarcocystis_neurona_SN300700765 Plasmodium_vivax_PVP010943500 Plasmodium_falciparum_PF3D71142800 Plasmodium_berghei_PBANKA0906200 Plasmodium_yoelii_PY17X0907600 Plasmodium_knowlesi_PKNH0940700 Plasmodium_chabaudi_PCHAS0707400 Theileria_annulata_TA17940 Theileria_parva_TP030605 Babesia_bovis_BBOVIII001940 Cryptosporidium_muris_CMU038530 Symbiodinum_minutum_symbB.v1.2.012108.t1 Perkinsus_marinus_XP002785638.1 Perkinsus_marinus_XP002771103.1 Perkinsus_marinus_XP002771100.1 
	;

END;


BEGIN TREES;
	Title 'Trees from "11.ASAP-4.treb"';
	ID 0163ca6872eb31;
	LINK Taxa = Untitled_Block_of_Taxa;
	TRANSLATE
[0] 		1 Toxoplasma_gondii_TGME49223040,
[1] 		2 Chromera_velia_Cvel1249,
[2] 		3 Vitrella_brassicaformis_Vbra17670,
[3] 		4 Neospora_caninum_NCLIV006060,
[4] 		5 Hammondia_hammondi_HHA223040,
[5] 		6 Eimeria_tenella_ETH00038660,
[6] 		7 Sarcocystis_neurona_SN300700765,
[7] 		8 Plasmodium_vivax_PVP010943500,
[8] 		9 Plasmodium_falciparum_PF3D71142800,
[9] 		10 Plasmodium_berghei_PBANKA0906200,
[10] 		11 Plasmodium_yoelii_PY17X0907600,
[11] 		12 Plasmodium_knowlesi_PKNH0940700,
[12] 		13 Plasmodium_chabaudi_PCHAS0707400,
[13] 		14 Theileria_annulata_TA17940,
[14] 		15 Theileria_parva_TP030605,
[15] 		16 Babesia_bovis_BBOVIII001940,
[16] 		17 Cryptosporidium_muris_CMU038530,
[17] 		18 Symbiodinum_minutum_symbB.v1.2.012108.t1,
[18] 		19 Perkinsus_marinus_XP002785638.1,
[19] 		20 Perkinsus_marinus_XP002771103.1,
[20] 		21 Perkinsus_marinus_XP002771100.1;
	TREE 'PAUP 1+' = (((((((1:0.01244,5:0.00848):0.0209,4:0.0335):0.09559,7:0.15862):0.053,6:0.11501):0.02575,((14:0.08315,15:0.10178):0.17702,16:0.22316):0.0322):0.02346,(((8:0.06243,12:0.06757):0.04592,((10:0.02029,11:0.01608):0.01519,13:0.03209):0.07989):0.03755,9:0.1655):0.15135):0.03931,((2:0.29584,3:0.29066):0.031,(18:0.27441,((19:0.07243,20:0.05992):0.0638,21:0.09595):0.17922):0.02275):0.01504,17:0.38365)[% ] [%unrooted = on ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1528109287457;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 6009104529505518071;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 88 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #6009104529505518071 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #6009104529505518071;
				getWindow;
				tell It;
					useTargetValue off;
					setTargetValue ;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 88 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #6009104529505518071  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 0163ca6872eb31;
					toggleUseWeights off;
				endTell;
				setAssignedID 3174.1528109243610.6058465695549532182;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 88 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;