#NEXUS
[written Mon Jun 04 12:48:40 CEST 2018 by Mesquite  version 3.5 (build 888) at kl-15168/10.0.1.34]

BEGIN TAXA;
	TITLE Untitled_Block_of_Taxa;
	DIMENSIONS NTAX=18;
	TAXLABELS
		Toxoplasma_gondii_TGME49260180 Chromera_velia_Cvel33208 Vitrella_brassicaformis_Vbra8465 Neospora_caninum_NCLIV026820 Hammondia_hammondi_HHA260180 Eimeria_tenella_ETH00017205 Sarcocystis_neurona_SN303400175 Plasmodium_vivax_PVP010207500 Plasmodium_falciparum_PF3D70107400 Plasmodium_berghei_PBANKA0206000 Plasmodium_yoelii_PY17X0207400 Plasmodium_knowlesi_PKNH0206200 Plasmodium_chabaudi_PCHAS0204400 Theileria_annulata_TA10780 Theileria_parva_TP040635 Babesia_bovis_BBOVIII007280 Cryptosporidium_muris_CMU028470 Perkinsus_marinus_XP002776776.1 
	;

END;


BEGIN TREES;
	Title 'Trees from "13.ASAP-6.treb"';
	ID 0163ca697dac35;
	LINK Taxa = Untitled_Block_of_Taxa;
	TRANSLATE
[0] 		1 Toxoplasma_gondii_TGME49260180,
[1] 		2 Chromera_velia_Cvel33208,
[2] 		3 Vitrella_brassicaformis_Vbra8465,
[3] 		4 Neospora_caninum_NCLIV026820,
[4] 		5 Hammondia_hammondi_HHA260180,
[5] 		6 Eimeria_tenella_ETH00017205,
[6] 		7 Sarcocystis_neurona_SN303400175,
[7] 		8 Plasmodium_vivax_PVP010207500,
[8] 		9 Plasmodium_falciparum_PF3D70107400,
[9] 		10 Plasmodium_berghei_PBANKA0206000,
[10] 		11 Plasmodium_yoelii_PY17X0207400,
[11] 		12 Plasmodium_knowlesi_PKNH0206200,
[12] 		13 Plasmodium_chabaudi_PCHAS0204400,
[13] 		14 Theileria_annulata_TA10780,
[14] 		15 Theileria_parva_TP040635,
[15] 		16 Babesia_bovis_BBOVIII007280,
[16] 		17 Cryptosporidium_muris_CMU028470,
[17] 		18 Perkinsus_marinus_XP002776776.1;
	TREE 'PAUP 1+' = (((((1:0.00997,5:0.01551):0.03997,4:0.05557):0.08578,7:0.16166):0.07884,((8:0.10205,12:0.09004):0.05409,(9:0.11203,(10:0.03971,(11:0.02496,13:0.03421):0.00467):0.08454):0.03354):0.12147):0.00293,((2:0.29621,(3:0.29162,(17:0.37334,18:0.27734):0.02116):0.00786):0.01761,6:0.26071):0.0071,((14:0.04567,15:0.05237):0.15801,16:0.19863):0.05968)[% ] [%unrooted = on ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1528109320198;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 1776239180595317950;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 100;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 700 464;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			showTaxa #1776239180595317950 #mesquite.lists.TaxonList.TaxonList;
			tell It;
				setTaxa #1776239180595317950;
				getWindow;
				tell It;
					useTargetValue off;
					setTargetValue ;
					newAssistant  #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.lists.ColorTaxon.ColorTaxon;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel;
				tell It;
					togglePanel off;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #1776239180595317950  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					setTreeBlockID 0163ca697dac35;
					toggleUseWeights off;
				endTell;
				setAssignedID 3526.1528109313604.2281521943727069004;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 600 392;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines on;
						orientUp;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName on;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;