#NEXUS [written Tue Jun 18 10:06:51 CEST 2019 by Mesquite version 3.51 (build 898) at 192.168.2.146/192.168.2.146] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=130; TAXLABELS Cyllamyces_aberensis_JN227893 Cyllamyces_aberensis_AY997042 Cyllamyces_aberensis_AM690060 Cyllamyces_aberensis_JQ934921 Cyllamyces_aberensis_JN227892 Cyllamyces_aberensis_FJ483845 Cyllamyces_sp._JN205759 Cyllamyces_sp._JN205784 Cyllamyces_sp._JQ934919 Cyllamyces_sp._JN205788 Cyllamyces_sp._AM690061 Cyllamyces_sp._FJ501277 Cyllamyces_sp._EU043229 Cyllamyces_sp._AM690047 Cyllamyces_sp._JN205786 Caecomyces_sp._JQ782554 Caecomyces_sp._JQ782555 Caecomyces_sp._JQ934915 Caecomyces_sp._GQ850297 Caecomyces_sp._GQ850340 Caecomyces_sp._JQ934926 Caecomyces_sp._GQ850290 Caecomyces_sp._JN205768 Caecomyces_sp._JN205780 Caecomyces_sp._JQ934924 Caecomyces_sp._GQ630940 Caecomyces_sp._AM690075 Caecomyces_sp._GQ631455 Caecomyces_sp._JQ934933 Caecomyces_sp._JQ934918 Caecomyces_sp._JF974109 Caecomyces_sp._JQ934928 Caecomyces_sp._GQ850302 Caecomyces_sp._JQ934930 Caecomyces_sp._JQ934931 Caecomyces_sp._JQ934917 Unknown_sp._GQ686304 Unknown_sp._GQ686301 Piromyces_sp._GQ850318 Piromyces_sp._JQ934935 Piromyces_sp._JQ934934 Piromyces_sp._GQ850360 Piromyces_sp._JQ934936 Piromyces_sp._JF423623 Piromyces_sp._FJ951427 Piromyces_sp._JN227899 Piromyces_sp._AF170206 Piromyces_sp._JF974106 Piromyces_sp._JN227888 Piromyces_sp._GQ857641 Piromyces_sp._AY429665 Piromyces_sp._AF170207 Piromyces_sp._AF170203 Piromyces_sp._GQ850293 NG13_sp._GQ850296 NG13_sp._JQ934938 Buwchfawromyces_eastonii_EU414758 Buwchfawromyces_eastonii_EU414759 Buwchfawromyces_eastonii_EU414755 Piromyces_sp._JN205774 Piromyces_sp._JN205777 Piromyces_sp._AF170204 Orpinomyces_sp._JN560944 Orpinomyces_sp._JN227887 Orpinomyces_sp._JN227895 Orpinomyces_sp._JQ782553 Orpinomyces_sp._JQ782551 Orpinomyces_sp._JN560942 Orpinomyces_sp._JN560952 Orpinomyces_sp._AY429673 Orpinomyces_sp._JN227900 Orpinomyces_sp._JN205762 Orpinomyces_sp._JN205781 Orpinomyces_sp._JN205790 Orpinomyces_sp._JN205761 Orpinomyces_sp._JN560953 Orpinomyces_sp._JN887643 Pecoramyces_ruminatium_KX961615 Pecoramyces_ruminatium_KX961613 Pecoramyces_ruminatium_KX961614 Pecoramyces_sp._JQ934898 Pecoramyces_sp._JQ934900 Feramyces_sp._GQ600856 Feramyces_sp._GQ600920 Feramyces_sp._GQ796786 Feramyces_sp._GQ638131 Feramyces_sp._GQ638316 Neocallimastix_frontalis_AY429664 Neocallimastix_sp._GQ850359 Neocallimastix_sp._AY997064 Neocallimastix_sp._JQ782542 Neocallimastix_sp._JQ934903 Neocallimastix_sp._JQ934907 Neocallimastix_patriciarum_AF170197 Neocallimastix_frontalis_AF170196 Neocallimastix_sp._JQ934908 Neocallimastix_sp._JQ934910 Neocallimastix_sp._JQ782547 Neocallimastix_sp._GQ607815 Neocallimastix_sp._GQ648894 Neocallimastix_sp._AM690052 Neocallimastix_sp._AM690041 Neocallimastix_sp._GQ692728 Neocallimastix_sp._GQ815916 Neocallimastix_sp._AM690065 OOntomyces_sp._GQ826454 OOntomyces_sp._GQ591883 OOntomyces_anksri_JX017310 Anaeromyces_sp._GQ857634 Anaeromyces_sp._FJ483846 Anaeromyces_sp._GQ850291 Liebetanzomyces_polymorphus_MH468765 Liebetanzomyces_polymorphus_MH468766 Anaeromyces_sp._JN560946 Anaeromyces_sp._JN560949 Anaeromyces_sp._JN205771 Anaeromyces_sp._JN560950 Anaeromyces_sp._AY429670 Anaeromyces_sp._JN560943 Anaeromyces_sp._JN887638 Anaeromyces_sp._AY429669 Anaeromyces_sp._JN887639 Anaeromyces_sp._JN560955 Anaeromyces_sp._JN227886 Anaeromyces_sp._JN560948 Anaeromyces_sp._JN560951 NG3_sp._GQ831317 NG3_sp._GQ829000 Monoblepharella_mexicana_AY997061 Monoblepharella_sp._AY997060 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=424; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Cyllamyces_aberensis_JN227893 ?????????????????????????????????????????????????? Cyllamyces_aberensis_AY997042 ???????????AAAAATGAG-------ACCT-GA-------TTTCAAGGT Cyllamyces_aberensis_AM690060 ?????????????????????????????????????????????????? Cyllamyces_aberensis_JQ934921 AAGGATCATTAAAAAATGAG-------ACCT-GA-------TTTCAAGGT Cyllamyces_aberensis_JN227892 ?????????????????????????????????????????????????? Cyllamyces_aberensis_FJ483845 AAGGATCATTAAAAAATGAG-------ACCTCGA------TTTTGAAGGT Cyllamyces_sp._JN205759 ?????????????????????????????????????????????????? Cyllamyces_sp._JN205784 ?????????????????????????????????????????????????? Cyllamyces_sp._JQ934919 AAGGATCATTAAAAAATGAG-------ACCTCGA------TTTTGAAGGT Cyllamyces_sp._JN205788 ?????????????????????????????????????????????????? Cyllamyces_sp._AM690061 ?????????????????????????????????????????????????? Cyllamyces_sp._FJ501277 AAGGATCATTAAAAAATGAA------GGCCCGAT------GAGAGGGTCT Cyllamyces_sp._EU043229 AAGGATCATTAAAAAATGAA------GGCCCGAT------GAGAGGGTCT Cyllamyces_sp._AM690047 ?????????????????????????????????????????????????? Cyllamyces_sp._JN205786 ?????????????????????????????????????????????????? Caecomyces_sp._JQ782554 AAGGATCATTAAAAAATTGG-------ACTCCA-------TTGGTGAGCT Caecomyces_sp._JQ782555 AAGGATCATTAAAAAATTGG-------ACTCCA-------TTGGTGAGTT Caecomyces_sp._JQ934915 AAGGATCATTAAAAAATTGG-------ACTCCA-------ATGGTGAGTT Caecomyces_sp._GQ850297 AAGGATCATTAAAAAATAAG-------ACCAATTTAAAAC-TATTTGGTC Caecomyces_sp._GQ850340 AAGGATCATTAAAAAATAAG-------ACCAATTTAAAACTTATTTGGTC Caecomyces_sp._JQ934926 AAGGATCATTAAAAAATTGG-------ACTCTTTTA----TAATTGAGTT Caecomyces_sp._GQ850290 AAGGATCATTAAAAAATGGA-------ACTCT--------TTCAAGAGTT Caecomyces_sp._JN205768 ?????????????????????????????????????????????????? Caecomyces_sp._JN205780 ?????????????????????????????????????????????????? Caecomyces_sp._JQ934924 AAGGATCATTAAAAAATGAG-------ACCT---------CTTTGAAGGT Caecomyces_sp._GQ630940 ?????????????????????????????????????????????????? Caecomyces_sp._AM690075 ?????????????????????????????????????????????????? Caecomyces_sp._GQ631455 ?????????????????????????????????????????????????? Caecomyces_sp._JQ934933 AAGGATCATTAATAAATGGC-------TCCTGAT------TTTTAAGGAG Caecomyces_sp._JQ934918 AAGGATCATTAATAAATGGC-------TCCTGA-------TTTTAAGGAG Caecomyces_sp._JF974109 AAGGATCATTTAAAAATGAG-------ACCT---------CTTTGAAGGT Caecomyces_sp._JQ934928 AAGGATCATTAAAAAATGTG-------ACCT---------CTTTGAAGGT Caecomyces_sp._GQ850302 AAGGATCATTAAAAAATGAG-------ACCT---------CTTTGAAGGT Caecomyces_sp._JQ934930 AAGGATCATTAAAAAATATC-------GCTCGAT------TGAGAGTGAT Caecomyces_sp._JQ934931 AAGGATCATTAAAAAATATC-------ACTTGAT------TGAAAGTGAT Caecomyces_sp._JQ934917 AAGGATCATTAAAAAATGGT-------ACTCTA-------AGTGAGTGCA Unknown_sp._GQ686304 ??????????????????????????????????------?????????? Unknown_sp._GQ686301 ??????????????????????????????????------?????????? Piromyces_sp._GQ850318 AAGGATCATTAATAAATGGC-------TCCTGA-------TTTTAAGGAG Piromyces_sp._JQ934935 AAGGATCATTAATAAATGGC-------TCCTGA-------TTTTAAGGAG Piromyces_sp._JQ934934 AAGGATCATTAAAAAATGAG-------ACCT---------CTTGAAGGTC Piromyces_sp._GQ850360 AAGGATCATTAATAAATGGC-------TCCTGAT------TTTTGAGGAG Piromyces_sp._JQ934936 AAGGGTCATTAATAAATGGC-------TCCTGA-------TTTTAAGGAG Piromyces_sp._JF423623 AAGGATCATTAATAAATGGC-------TCCG---------ATTGTAGGAG Piromyces_sp._FJ951427 GAGGATCATTAATCAAATGG-------CTCGATT------TTTAGAGCAT Piromyces_sp._JN227899 ??????????????????????????????????------?????????? Piromyces_sp._AF170206 AAGGATCATTAATAAAATAT-------CACATT-------TGTTTGTGAT Piromyces_sp._JF974106 AAGGATCATTAATAAATGGT-------TTACGTT------TTTAAGTAGA Piromyces_sp._JN227888 ?????????????????????????????????????????????????? Piromyces_sp._GQ857641 TTGGATCATTAATAAATGGC---------TCGAT------TTTTAGAGCA Piromyces_sp._AY429665 AAGGATCATTAATAAATGGC---------TCGAT------TTTTAGAGCA Piromyces_sp._AF170207 AAGGATCATTAAAAAATTGG-----AGTGCCGTT------GTTTTGGTCA Piromyces_sp._AF170203 AAGGATCATTAATAAAAT-------AGTTCTGAT------TTTAAAAGCA Piromyces_sp._GQ850293 AAGGATCATTAAAAAATGGT-------ACTCTA-------AGTGAGTGCA NG13_sp._GQ850296 AAGGATCATTAAAAAATGGT-------ACTCTA-------AGTGAGTGCA NG13_sp._JQ934938 AAGGATCATTAAAAAATGGT-------GCTCTT-------TGTGAGTACA Buwchfawromyces_eastonii_EU414758 AAGGATCATTAATAAATAGT-------CAACTTT------GTAGTTGGCA Buwchfawromyces_eastonii_EU414759 AAGGATCATTAATAAATAGT-------CAACTTT------GTAGTTGGCA Buwchfawromyces_eastonii_EU414755 AAGGATCATTAATAAATAGTGTC----AACGTTT------GATGTTGACA Piromyces_sp._JN205774 ?????????????????????????????????????????????????? Piromyces_sp._JN205777 ?????????????????????????????????????????????????? Piromyces_sp._AF170204 ??AAGGATCATTAATAAAAT-------AGTTC--------ACACAGTACA Orpinomyces_sp._JN560944 AAGGATCATTAAAAAATAAT---------CACAG------TTTTGTGATT Orpinomyces_sp._JN227887 ?????????????????????????????????????????????????? Orpinomyces_sp._JN227895 ?????????????????????????????????????????????????? Orpinomyces_sp._JQ782553 AAGGATCATTAAAAAATAAT---------CACAG------TTTTGTGATT Orpinomyces_sp._JQ782551 AAGGATCATTAAAAAATAAT---------CACAG----TTTTTTGTGATT Orpinomyces_sp._JN560942 AAGGATCATTAAAAAATAAT---------CACTG------TTTTGTGATT Orpinomyces_sp._JN560952 AAGGATCATTAAAAAATAAT---------CACTG------TTTTGTGATT Orpinomyces_sp._AY429673 AAGGATCATTAAAAAATAAT---------CACTG------TATTGTGATT Orpinomyces_sp._JN227900 ?????????????????????????????????????????????????? Orpinomyces_sp._JN205762 ?????????????????????????????????????????????????? Orpinomyces_sp._JN205781 ?????????????????????????????????????????????????? Orpinomyces_sp._JN205790 ?????????????????????????????????????????????????? Orpinomyces_sp._JN205761 ?????????????????????????????????????????????????? Orpinomyces_sp._JN560953 ???GATCATTAAAAAATATC----------ACACGTTTTTTTTGTGTGAT Orpinomyces_sp._JN887643 ???GATCATTAAAAAATATC----------ACACGTTTTTTTTGTGTGAT Pecoramyces_ruminatium_KX961615 ?????????????????????????????????????????????????? Pecoramyces_ruminatium_KX961613 ?????????????????????????????????????????????????? Pecoramyces_ruminatium_KX961614 ?????????????????????????????????????????????????? Pecoramyces_sp._JQ934898 AAGGATCATTAAAAAAT------------ATCACATTT--TGTATGTGAT Pecoramyces_sp._JQ934900 AAGGATCATTAAAAAAAT-----------ATCACATTT--TGTATGTGAT Feramyces_sp._GQ600856 ?????????????????????????????????????????????????? Feramyces_sp._GQ600920 ?????????????????????????????????????????????????? Feramyces_sp._GQ796786 ?????????????????????????????????????????????????? Feramyces_sp._GQ638131 ?????????????????????????????????????????????????? Feramyces_sp._GQ638316 ?????????????????????????????????????????????????? Neocallimastix_frontalis_AY429664 AAGGATCATTAAAAAATATC-------GCTCGAT------TGAGAGTGAT Neocallimastix_sp._GQ850359 AAGGATCATTAAAAAATATC-------GCTCGAT------TGAGAGTGAT Neocallimastix_sp._AY997064 ???????????AAAAATATC-------ACTCGAT------TGAGAGTGAT Neocallimastix_sp._JQ782542 AAGGATCATTAAAAAATATC-------ACTCGAT------TGAGAGTGAT Neocallimastix_sp._JQ934903 AAGGATCATTAAAAAATATC-------ACTTGAT------TGAAAGTGAT Neocallimastix_sp._JQ934907 AAGGATCATTAAAAAATTGG-------ACTCCAC------TGGTG--AGT Neocallimastix_patriciarum_AF170197 AAGGATCATTAAAAAATATC-------ACTCGAT------TGAGAGTGAT Neocallimastix_frontalis_AF170196 AAGGATCATTAAAAAATATC-------ACTCGAT------TGAGAGTGAT Neocallimastix_sp._JQ934908 AAGGATCATTAATAAATGGC-------TCCTGAT------TTTTAAGGAG Neocallimastix_sp._JQ934910 AAGGATCATTAAAAAATATC-------GCTCGAT------TGAGAGTGAT Neocallimastix_sp._JQ782547 AAGGATCATTAAAAAATATC-------GCTCGAT------TGAGAGTGAT Neocallimastix_sp._GQ607815 ?????????????????????????????????????????????????? Neocallimastix_sp._GQ648894 ?????????????????????????????????????????????????? Neocallimastix_sp._AM690052 ?????????????????????????????????????????????????? Neocallimastix_sp._AM690041 ?????????????????????????????????????????????????? Neocallimastix_sp._GQ692728 ?????????????????????????????????????????????????? Neocallimastix_sp._GQ815916 ?????????????????????????????????????????????????? Neocallimastix_sp._AM690065 ?????????????????????????????????????????????????? OOntomyces_sp._GQ826454 ?????????????????????????????????????????????????? OOntomyces_sp._GQ591883 ?????????????????????????????????????????????????? OOntomyces_anksri_JX017310 AAGGATCATTAATAAATTTTTTTCCATAAAAAAA------AGGAAAAAAA Anaeromyces_sp._GQ857634 AAGGATCATTAATAAATTTCCA-----ACCGATG------TAGTTTTAAA Anaeromyces_sp._FJ483846 AAGGATCATTAATAAATTTCCA-----ACCGATG------TAGTTGGAAA Anaeromyces_sp._GQ850291 AAGGATCATTAATAAATTTCC------AACGAAT------GAGTTGGATA Liebetanzomyces_polymorphus_MH468765 ????????????????CTGA-------CATATTT------TGGTTAGATA Liebetanzomyces_polymorphus_MH468766 ?????????????????????????????TATTT------TGGTTAGATA Anaeromyces_sp._JN560946 ATGGATCATTATTAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._JN560949 ATGGATCATTATTAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._JN205771 ?????????????????????????????????????????????????? Anaeromyces_sp._JN560950 AAGGATCATTAATAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._AY429670 AAGGATCATTAATAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._JN560943 AAGGATCATTAATAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._JN887638 AAGGATCATTAATAAATTTTCCA----ACGATCC------TGTTGGAATA Anaeromyces_sp._AY429669 AAGGATCATTAATAAATTTTCCA----ACGAATTGG----TGTTGGAATA Anaeromyces_sp._JN887639 AAGGATCATTAATAAATTTCC------AACAAAT------GTGTTGGATA Anaeromyces_sp._JN560955 AAGGATCATTAATAAATTTCC------AACAAAT------GTGTTGGATA Anaeromyces_sp._JN227886 ?????????????????????????????????????????????????? Anaeromyces_sp._JN560948 AAGGATCATTAATAAATTTCCAA----CAAATGT------GTGTTGGATA Anaeromyces_sp._JN560951 AAGGATCATTAATAAATTTCCAA----CAAATGT------GTGTTGGATA NG3_sp._GQ831317 ?????????????????????????????????????????????????? NG3_sp._GQ829000 ?????????????????????????????????????????????????? Monoblepharella_mexicana_AY997061 AAAGGCCCTGGTAAAAAGGG---------------------------AAA Monoblepharella_sp._AY997060 GGGGGCTGTTTGAGCTTCCGCTCATA-GCCCCTC------GAAGGGCCTT Cyllamyces_aberensis_JN227893 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_aberensis_AY997042 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_aberensis_AM690060 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_aberensis_JQ934921 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_aberensis_JN227892 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_aberensis_FJ483845 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_sp._JN205759 ??????????T-CCTACCCTTTGTGAAT-TTGTTTTGT------------ Cyllamyces_sp._JN205784 ??????????T-CCTACCCTTTGTGAAT-TTGTTTTGT------------ Cyllamyces_sp._JQ934919 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_sp._JN205788 ??????????T-CCTACCCTTTGTGAAT-TTGTTTTGT------------ Cyllamyces_sp._AM690061 ????????????CCTACCCTTTGTGAAT-TTG-TTTGT------------ Cyllamyces_sp._FJ501277 TATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTT----------- Cyllamyces_sp._EU043229 TATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTT----------- Cyllamyces_sp._AM690047 ????????????CCTACCCTTTGTGAAT-TTG-TTTGTT----------- Cyllamyces_sp._JN205786 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTT----------- Caecomyces_sp._JQ782554 CATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JQ782555 CATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JQ934915 CATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._GQ850297 TATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._GQ850340 TATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JQ934926 CATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGT------------ Caecomyces_sp._GQ850290 CATTAATAATC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JN205768 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTG-AATAA-TT Caecomyces_sp._JN205780 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JQ934924 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._GQ630940 ????????????CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._AM690075 ????????????CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._GQ631455 ????????????CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAGTAA-TT Caecomyces_sp._JQ934933 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._JQ934918 CACTTAATAATCCCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Caecomyces_sp._JF974109 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._JQ934928 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._GQ850302 CTATTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._JQ934930 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Caecomyces_sp._JQ934931 TTAATAATCAT-CCTACCCTTCGTGAAT-TTG--TTGTTTGTAATAA-TT Caecomyces_sp._JQ934917 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Unknown_sp._GQ686304 ????????????CCTACCCTTTGTGAAT-TTG-GTTTGTTTGAATAA-TT Unknown_sp._GQ686301 ????????????CCTACCCTTTGTGAAT-TTG-GTTTGTTTGAATAA-TT Piromyces_sp._GQ850318 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Piromyces_sp._JQ934935 CACTTAATAATCCCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Piromyces_sp._JQ934934 TATTAATAATC-CCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Piromyces_sp._GQ850360 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Piromyces_sp._JQ934936 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Piromyces_sp._JF423623 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._FJ951427 TAATAATCCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._JN227899 ??????????T-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._AF170206 TTAATAATCAT-CCTACCCTTTGTGAATATTG-TTGTTTTGAAACAA-TT Piromyces_sp._JF974106 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Piromyces_sp._JN227888 ??????????T-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._GQ857641 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._AY429665 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Piromyces_sp._AF170207 TTATTAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTG-TGTAATAA-TT Piromyces_sp._AF170203 ATTAAAATCAT-CCTACCCTTTGTGAAT-TTG----------------TT Piromyces_sp._GQ850293 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT NG13_sp._GQ850296 TTAATAATCAC-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT NG13_sp._JQ934938 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGCTTGAAATAA-TT Buwchfawromyces_eastonii_EU414758 TTAATAATCAT-CCTACCCTTTGTGAAC-TGATATAG-TTGT-------- Buwchfawromyces_eastonii_EU414759 TTAATAATCAT-CCTACCCTTTGTGAAC-TGATATAG-TTGT-------- Buwchfawromyces_eastonii_EU414755 TTAATAATCATCCTTACCCTTTGTGAAC-TGATATAG-TTGT-------- Piromyces_sp._JN205774 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTG-AATAA-TT Piromyces_sp._JN205777 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTG-AATAA-TT Piromyces_sp._AF170204 TTAATAATCAT-CCTACCCTTTGTGAAT-TTGAATTG-TT--AATAA-TT Orpinomyces_sp._JN560944 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAG-AAA--T Orpinomyces_sp._JN227887 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAG-AAA--T Orpinomyces_sp._JN227895 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAGAAAA--T Orpinomyces_sp._JQ782553 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAGAAAA--T Orpinomyces_sp._JQ782551 TTAATAATCAT-CCTACCCTTTGTGAAT-CTG-TTTTATAAAAGAAA-TT Orpinomyces_sp._JN560942 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGT-TTGAAAA--T Orpinomyces_sp._JN560952 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGT-TTGAAAA--T Orpinomyces_sp._AY429673 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGT-TTGAAAA--T Orpinomyces_sp._JN227900 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGT-TTGAAAA--T Orpinomyces_sp._JN205762 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGT-TTGAAAA--T Orpinomyces_sp._JN205781 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGTATTGAAAA--T Orpinomyces_sp._JN205790 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAGAAAA--T Orpinomyces_sp._JN205761 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTTGTAAAGAAAA--T Orpinomyces_sp._JN560953 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGTATTGAAAA--T Orpinomyces_sp._JN887643 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTTGTATTGAAAA--T Pecoramyces_ruminatium_KX961615 ??????????T-CCTACCCTTTGTGAAT-TTG-TTT-TTGTTTG-AA--T Pecoramyces_ruminatium_KX961613 ????????????????????????????-???-???--?????????--? Pecoramyces_ruminatium_KX961614 ????????????????????????????-???-TTT-TTGTTTG-AA--T Pecoramyces_sp._JQ934898 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTT-TGTTTGAAA--T Pecoramyces_sp._JQ934900 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTT-TGTTTGAAA--T Feramyces_sp._GQ600856 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGTCATGTAAAA-TT Feramyces_sp._GQ600920 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTCATGTAAAA-TT Feramyces_sp._GQ796786 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTCATGTAAAA--T Feramyces_sp._GQ638131 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGTCGTGTAAAA--T Feramyces_sp._GQ638316 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTCATGTAAAA--T Neocallimastix_frontalis_AY429664 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGTAATAA-TT Neocallimastix_sp._GQ850359 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGTAATAA--T Neocallimastix_sp._AY997064 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGTAATAA-TT Neocallimastix_sp._JQ782542 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGTAATAA-TT Neocallimastix_sp._JQ934903 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGTAATAA-TT Neocallimastix_sp._JQ934907 TCATTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Neocallimastix_patriciarum_AF170197 TTAATAATCAT-CCTA-CCTTTGTGAAT-TTG-TTTGT------------ Neocallimastix_frontalis_AF170196 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGT---AAATAA-TT Neocallimastix_sp._JQ934908 CACTTAATAAT-CCTACCCTTTGTGAAT-TTG--TTGTATGAAATAA-TT Neocallimastix_sp._JQ934910 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Neocallimastix_sp._JQ782547 TTAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Neocallimastix_sp._GQ607815 ???????????-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Neocallimastix_sp._GQ648894 ???????????-CCTACCCTTTGTGAAT-TTG--TTGTTTGAAATAA-TT Neocallimastix_sp._AM690052 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Neocallimastix_sp._AM690041 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Neocallimastix_sp._GQ692728 ???????????-CCTACCCTTTGTGAAT-TTGTTTTG-TTGAATTAA-TT Neocallimastix_sp._GQ815916 ???????????-CCTACCCTTTGTGAAT-TTGTTTTG-TTGAA-TAA-TT Neocallimastix_sp._AM690065 ???????????-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT OOntomyces_sp._GQ826454 ????????????CCTACCCTTTGTGAAT-TTG-TTTTT----AATTG-TT OOntomyces_sp._GQ591883 ????????????CCTACCCTTTGTGAAT-TTG-TTTTT----AATTG--T OOntomyces_anksri_JX017310 ACAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Anaeromyces_sp._GQ857634 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAATAAT-TT Anaeromyces_sp._FJ483846 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG--TTGTTTGAATAAT-TT Anaeromyces_sp._GQ850291 ACAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAATAAT-TT Liebetanzomyces_polymorphus_MH468765 ACAATAATCAT-CCTACCCTATGTGAAT-TTG--TTGTATAAAATAA-TT Liebetanzomyces_polymorphus_MH468766 ACAATAATCAT-CCTACCCTATGTGAAT-TTG--TTGTATAAAATAA-TT Anaeromyces_sp._JN560946 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN560949 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN205771 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN560950 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._AY429670 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN560943 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Anaeromyces_sp._JN887638 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Anaeromyces_sp._AY429669 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN887639 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN560955 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAATTT Anaeromyces_sp._JN227886 ??????????T-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Anaeromyces_sp._JN560948 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT Anaeromyces_sp._JN560951 ATAATAATCAT-CCTACCCTTTGTGAAT-TTG-TTTGTTTGAAATAA-TT NG3_sp._GQ831317 ????????????CCTACCCTTTGTGAAT-TTG-TTAATTTGTAAAAA--- NG3_sp._GQ829000 ????????????CCTACCCTTTGTGAAT-TTG-TTAATTTTGTAAAA--- Monoblepharella_mexicana_AY997061 AGCCAGTCCAC-CCCACACTTTGTGCAC-CGT------------TAACCT Monoblepharella_sp._AY997060 TGCCTGTCCAC-CCCACACTTTGTGCAC-CTA------------AAACCT Cyllamyces_aberensis_JN227893 --------------------------TTTATTA----TG-----TG-TCT Cyllamyces_aberensis_AY997042 --------------------------TTTATTA----TG-----TG-TCT Cyllamyces_aberensis_AM690060 --------------------------TTTATTA----TG-----TG-TCT Cyllamyces_aberensis_JQ934921 --------------------------TTTATTA----TG-----TG-TCT Cyllamyces_aberensis_JN227892 --------------------------TTTATT-----TA-----TG-TCT Cyllamyces_aberensis_FJ483845 --------------------------TTTATT-----TA-----TG-TCT Cyllamyces_sp._JN205759 --------------------------TTTATTA----TA-----TG-TCT Cyllamyces_sp._JN205784 --------------------------TTTATTA----TA-----TG-TCT Cyllamyces_sp._JQ934919 --------------------------TTTATTA----TA-----TG-TCT Cyllamyces_sp._JN205788 --------------------------TTTAATA----TG-----TG-TCT Cyllamyces_sp._AM690061 --------------------------TTTATTA----TG-----TG-TCT Cyllamyces_sp._FJ501277 --------------------------TTTATAAA--CTG-----TG-TCT Cyllamyces_sp._EU043229 --------------------------TTTATAAA--CTG-----TG-TCT Cyllamyces_sp._AM690047 --------------------------TTTATAAA--CTG-----TG-TCT Cyllamyces_sp._JN205786 --------------------------TTTAAAT----TG-----TG-TCT Caecomyces_sp._JQ782554 TTTTTTCC----------AAAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ782555 TTTTTTCC-----------AAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934915 TTTTTTCC-----------AAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._GQ850297 TTTTTTA------------TTAAAAAATTATTG----AA---TGTG-TCT Caecomyces_sp._GQ850340 TTTTTTA------------TTAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934926 -------------------------AATTATCG----AA-----TG-TCT Caecomyces_sp._GQ850290 TTTTTA-------------TTAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JN205768 TTTTTTA------------TTAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JN205780 TTTTTAT------------TAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934924 TTTTTC-------------CAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._GQ630940 TTTT------------------AAAAATTATTA----AA-----TG-TCT Caecomyces_sp._AM690075 TTTT------------------AAAAATTATTG----AA-----TG-TCT Caecomyces_sp._GQ631455 TTTT------------------AAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934933 TTTTTC-------------CAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934918 TCTTTTCC-----------AAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JF974109 TTTTTC-------------CAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934928 TTTTTCC------------AAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._GQ850302 TTTTTTC------------CAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934930 TTTTTC-------------CAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934931 TTTTTTCC-----------AAAAAAAATTATTG----AA-----TG-TCT Caecomyces_sp._JQ934917 TTTTTTCC-----------AAAAAAAATTATTG----AA-----TG-TCT Unknown_sp._GQ686304 TTTTTTT--------------TAAAAATTATTGG----------AG-TCT Unknown_sp._GQ686301 TTTTTTTT------ATTTTTTTAAAAATTATTG----GA-----GT-TCT Piromyces_sp._GQ850318 TTTTTT---------------AAAAAATTATTGA----------TG-TCT Piromyces_sp._JQ934935 TTTTTT---------------AAAAAATTATTGA----------TG-TCT Piromyces_sp._JQ934934 TTTTTT---------------AAAAAATTATTGA----------TG-TCT Piromyces_sp._GQ850360 TTTTTT-----------------TAAAATTATT----GA-----TG-TCT Piromyces_sp._JQ934936 TTTTTT-----------------AAAATTATTG----AT-----TG-TCT Piromyces_sp._JF423623 TTTTTT-----------------AAAATTATTG----AT-----TG-TCT Piromyces_sp._FJ951427 TTTTTT-----------------AAAATTATTGA----------TG-TCC Piromyces_sp._JN227899 TTTTTT-----------------AAAATTATTGA----------TG-TCC Piromyces_sp._AF170206 TTTTT-----------------AAAAATTATTG----AT-----TG-TCT Piromyces_sp._JF974106 TTTTTT-----------------AAAATTATTG----AA-----TG-TCT Piromyces_sp._JN227888 TTTTTT-----------------TAAAATTATT----GA-----TG-TCT Piromyces_sp._GQ857641 TTTTTT-----------------TAAAATTATT----GA-----TG-TCT Piromyces_sp._AY429665 TTTTTT-----------------TAAAATTATT----GA-----TG-TCT Piromyces_sp._AF170207 TTTTT---------------------------------------TG-TCT Piromyces_sp._AF170203 TTTT-----------------AATAGATTTATG----AA-----TG-TCT Piromyces_sp._GQ850293 TTTTTTT--------------AAAAAATTATTG----AA-----TG-TCT NG13_sp._GQ850296 TTTTTTT--------------AAAAAATTATTG----AA-----TG-TCT NG13_sp._JQ934938 TTTTTTT--------------AAAAAATTATTG----AA-----TG-TCT Buwchfawromyces_eastonii_EU414758 -----------------------ATATTTATTA----AG-----TG-TCT Buwchfawromyces_eastonii_EU414759 -----------------------ATATTTATTA----AG-----TG-TCT Buwchfawromyces_eastonii_EU414755 -----------------------ATATTTATTA----AG-----TG-TCT Piromyces_sp._JN205774 TTTTTT-------------ATGAAAAATTAT-------------TG-TCT Piromyces_sp._JN205777 TTTTTT-------------ATGAAAAATTAT-------------TG-TCT Piromyces_sp._AF170204 TTAA---------------GAAGAAAATTAT------AA-----AG-TCT Orpinomyces_sp._JN560944 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN227887 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN227895 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JQ782553 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JQ782551 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN560942 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN560952 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._AY429673 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN227900 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN205762 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN205781 TTATGT--------------------------------------GG-TCT Orpinomyces_sp._JN205790 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN205761 TTATGT--------------------------------------TG-TCT Orpinomyces_sp._JN560953 TTATGT--------------------------------------GG-TCT Orpinomyces_sp._JN887643 TTATGT--------------------------------------GG-TCT Pecoramyces_ruminatium_KX961615 TTATGT--------------------------------------TG-TCT Pecoramyces_ruminatium_KX961613 ??????--------------------------------------TG-TCT Pecoramyces_ruminatium_KX961614 TTATGT--------------------------------------TG-TCT Pecoramyces_sp._JQ934898 TTATGT--------------------------------------TG-TCT Pecoramyces_sp._JQ934900 TTATGT--------------------------------------TG-TCT Feramyces_sp._GQ600856 TTTT----------------------------------------TG-TCT Feramyces_sp._GQ600920 TTTT----------------------------------------TG-TCT Feramyces_sp._GQ796786 TTTT----------------------------------------TG-TCT Feramyces_sp._GQ638131 TTTT----------------------------------------TG-TCT Feramyces_sp._GQ638316 TTTT----------------------------------------TG-TCT Neocallimastix_frontalis_AY429664 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._GQ850359 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._AY997064 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._JQ782542 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._JQ934903 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._JQ934907 TTTTTT------GATTTTAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_patriciarum_AF170197 -----------------------AATGTTATTT----ATG---TTG-TCT Neocallimastix_frontalis_AF170196 TTTTTTTG---A---TTTTAAAAAAAATTATTT----ATGGTTTTC-GTA Neocallimastix_sp._JQ934908 TTTTTTTGACGTGGAATAAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._JQ934910 TTTTTTTGACGTGGAATAAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._JQ782547 TTTTTTTGACGTGGAATAAAAAAAAAATTATTT----ATGGTTTTG-TCT Neocallimastix_sp._GQ607815 TTTTT---------------AAAAAAATTATTT----ATAGTTTTG-TCT Neocallimastix_sp._GQ648894 TTTT-----------------AAAAAATTATTT----ATAGTTTTG-TCT Neocallimastix_sp._AM690052 TTTT---------------AAAGAAAATTATTT----ATAG-TTTG-TCT Neocallimastix_sp._AM690041 TTTT--------------AAAGAAAAATTATTT----ATGG-TTTG-TCT Neocallimastix_sp._GQ692728 TTTT-------------------AAAATTATTT----AT-----TG-TCT Neocallimastix_sp._GQ815916 TTTT-------------------AAAATTATTT----AT-----TG-TC- Neocallimastix_sp._AM690065 TTTT-------------AAAAGAAAAATTATTT----AT-----AG-TCT OOntomyces_sp._GQ826454 TTTTTT-----------------AAAGTTGTCT----------TTCCTCT OOntomyces_sp._GQ591883 TTTTTT-----------------AAAGTTGTCT----------TTCCTCT OOntomyces_anksri_JX017310 TTTTTTT--------------AAAAAATTATTTATAAAA-----TG-TCT Anaeromyces_sp._GQ857634 TTTTTTT--------------GAAAAATTATTTC----------TG-TCT Anaeromyces_sp._FJ483846 TTTTTTT--------------GAAAAATTATTTC----------TG-TCT Anaeromyces_sp._GQ850291 TTTT-----------------GAAAAATTATTT----------TTG-TCT Liebetanzomyces_polymorphus_MH468765 TTTTTT-------------GATAAAAATTATTT----GA---TTTG-TCT Liebetanzomyces_polymorphus_MH468766 TTTTTT-------------GATAAAAATTATTT----GA---TTTG-TCT Anaeromyces_sp._JN560946 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._JN560949 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._JN205771 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._JN560950 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._AY429670 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._JN560943 TTTTTTT--------------AAAAAATTATTT--AAAA-----TG-TCT Anaeromyces_sp._JN887638 TTTTTTT--------------AAAAAATTATTT--AAAA-----TG-TCT Anaeromyces_sp._AY429669 TTTTTTT--------------AAAAAATTATTT--AGAA-----TG-TCT Anaeromyces_sp._JN887639 TTTTTTT--------------AAAAAATTATTT--AGAA-----TT-TCT Anaeromyces_sp._JN560955 TTTTTTT--------------AAAAAATTATTT--AGAA-----TG-TCT Anaeromyces_sp._JN227886 TTTTTTT--------------AAAAAATTATTT--AGAA-----TG-TCT Anaeromyces_sp._JN560948 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT Anaeromyces_sp._JN560951 TTTTTTT--------------AAAAAATTATTT---GAA-----TG-TCT NG3_sp._GQ831317 -----------A--------------------------------TG-TTC NG3_sp._GQ829000 -----------A--------------------------------TG--TC Monoblepharella_mexicana_AY997061 GTCTCTGG----CG-----GGTGGCTTTCAGTTCG---------CGGCCC Monoblepharella_sp._AY997060 GTCTCTG------------GCAGGCGGCCAATC----AA-----TTCTTC Cyllamyces_aberensis_JN227893 TTCCC-TG---------TTTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_aberensis_AY997042 TTCCC-TG---------TTTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_aberensis_AM690060 TTCCC-TG----------TTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_aberensis_JQ934921 TTCCC-TG----------TTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_aberensis_JN227892 TTCCC-TG---------TTTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_aberensis_FJ483845 TTCCC-TG---------TTTGGTTTG-------AAGC-TTTG--TT---- Cyllamyces_sp._JN205759 TTCCC-TGG---------TTTTGATG-------GAGC--TTG--T----- Cyllamyces_sp._JN205784 TTCCC-TGG---------TTTTGATG-------GAGC--TTG--T----- Cyllamyces_sp._JQ934919 TTCCC-TGG---------TTTTGATG-------GAGC--TTG--T----- Cyllamyces_sp._JN205788 TTCCC-TGG--------TTTTTGATG-------GAGC--TTG--T----- Cyllamyces_sp._AM690061 TTCCC-TGG---------TTTTGATG-------GAGC--TTG-------- Cyllamyces_sp._FJ501277 TTCCC-TGC--------TTTTTGATG-------AAGC--TTG--TT---- Cyllamyces_sp._EU043229 TTCCC-TGC--------TTTTTGATG-------GAGC--TTG--TT---- Cyllamyces_sp._AM690047 TTCCC-TG---------TTTTTGATG-------GAGC--TTG--TT---- Cyllamyces_sp._JN205786 TTCCC-TG----------TTTTGACG-------GAGC--TTG--T----- Caecomyces_sp._JQ782554 TTCCC-TG----------TTTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ782555 TTCCC-TG----------TTTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934915 TTCCC-TG----------TTTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._GQ850297 TTCCC-TG-----------TTTTTTGG--TGGAGAAT-TGTG--T----- Caecomyces_sp._GQ850340 TTCCC-TG-----------TTTTTTTGG-TGGAGAAT--TGG--T----- Caecomyces_sp._JQ934926 TTCCC-TGGTTTT----TTTTTGGTG-------GAAA--TGG--TA---- Caecomyces_sp._GQ850290 TTCCC-TG-----------TTTTTTTGG-TGGAAAAA--TGG--T----- Caecomyces_sp._JN205768 TTCCC-TG-----------TTTTTTGG--TGGAAAAA--TGG--T----- Caecomyces_sp._JN205780 TTCCC-TG-----------TTTTTTGG--TGGAAAAA--TGG--T----- Caecomyces_sp._JQ934924 TTCCC-TG------------TTTTTGG--TGGAAAAA--TGG--T----- Caecomyces_sp._GQ630940 TTCCC-TG-----------GTTGTT--------TTGC--TTT--T----- Caecomyces_sp._AM690075 TTCCCTTG-----------GTTTGT--------TTGC--TTT--T----- Caecomyces_sp._GQ631455 TTCCC-CG-----------GTTTGT--------TTGC--TTT--T----- Caecomyces_sp._JQ934933 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934918 TTCCC-TG----------TTTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JF974109 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934928 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--C----- Caecomyces_sp._GQ850302 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934930 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934931 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Caecomyces_sp._JQ934917 TTCCC-TG-----------TTTGGTG-------GAGC--TTG--T----- Unknown_sp._GQ686304 TTCCC------------TTTAGAGTTTGCTTTTGAGT--TTG--T----- Unknown_sp._GQ686301 TTTCCCTTTAG----TAGTTTGTCTTTT-----GTAG--TTTAGT----- Piromyces_sp._GQ850318 TTCCC-TG-----------TTGAATTTG-----GTTG--TCG--T----- Piromyces_sp._JQ934935 TTCCC-TG-----------TTGAATTTG-----GTTG--TCG--T----- Piromyces_sp._JQ934934 TTCCC-TG-----------TTGAATTTG-----GTTG--TCG--T----- Piromyces_sp._GQ850360 TTCCC-TG-----------TTGAATTAG-----AGTG--TCT-------- Piromyces_sp._JQ934936 TTCCC-TG-----------TTGAATTAG-----AGTG--TCT-------- Piromyces_sp._JF423623 TTCCC-TG-----------TTGAATTAG------TTG--TCG-------- Piromyces_sp._FJ951427 TTCCC-TG-----------GTGAATTGG----TTTGG--TCC--T----- Piromyces_sp._JN227899 TTCCC-TG-----------GTGAATTGG----TTTGG--TCC--T----- Piromyces_sp._AF170206 TTCCC-TG-----------TTGAATA-----GAGTGT--TTTCGT----- Piromyces_sp._JF974106 TTCCC-TG-----------TTGAATTGG-----TTGT--CTC-------- Piromyces_sp._JN227888 TTCCC-TG-----------TTGAATTGG-----TTGG--TCG-------- Piromyces_sp._GQ857641 TTCCC-TG-----------TTGAATTGG-----TTGG--TCG-------- Piromyces_sp._AY429665 TTCCC-TG-----------TTGAATTGG-----TTGG--TCG-------- Piromyces_sp._AF170207 ATCCC-TG-----------------------AAGAAG------------- Piromyces_sp._AF170203 TTCCC-TG-----------TTGAAT----TTGGAAGA--TTATCTT---- Piromyces_sp._GQ850293 TTCCC-TG-----------TTGAATG---GATAAAAG--TTG--T----- NG13_sp._GQ850296 TTCCC-TG-----------CTGAATG---GATAAAAG--TTG--T----- NG13_sp._JQ934938 TTCCC-TG-----------TTGAATG---GATAAAAG--TTG--T----- Buwchfawromyces_eastonii_EU414758 TTCCC-TAATG--------------------------------------- Buwchfawromyces_eastonii_EU414759 TTCCC-TAATG--------------------------------------- Buwchfawromyces_eastonii_EU414755 TTCCC-TAATG--------------------------------------- Piromyces_sp._JN205774 TTCCC-TG-----------TTGAATG----TTAGTGG--TGT--T----- Piromyces_sp._JN205777 TTCCC-TG-----------TTGAATG----TTAGTGG--TG---T----- Piromyces_sp._AF170204 TTCCC-TAATG------------------GAGAATGG--TTG--T----- Orpinomyces_sp._JN560944 ATCCC-TTGG-------ATT----ATT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN227887 ATCCC-TTGG-------ATT----ATT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN227895 ATCCC-TTGG-------ATTT---ATT--TGGAAAAG--TTG-------- Orpinomyces_sp._JQ782553 ATCCC-TTGG-------ATTT-AATTT--GGAAAAAG--TTG-------- Orpinomyces_sp._JQ782551 ATCCC-TTGG-------AATTTAATTT--GGAAAAAG--TTG-------- Orpinomyces_sp._JN560942 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN560952 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._AY429673 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN227900 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN205762 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN205781 ATCCC-TGGT------------GGTTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN205790 ATCCC-TGGT-------GGTT---TTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN205761 ATCCC-TGGT-------GGT----TTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN560953 ATCCC-TGAT-------GGT----TTT--TGGAAAAG--TTG-------- Orpinomyces_sp._JN887643 ATCCC-TGAT-------GGT----TTT--TGGAAAAG--TTG-------- Pecoramyces_ruminatium_KX961615 ATCCC-TGAAA--------------TTGGAAG-AAAG--TCG--T----- Pecoramyces_ruminatium_KX961613 ATCCC-TGAAA--------------TTGGAAG-AAAG--TCG--T----- Pecoramyces_ruminatium_KX961614 ATCCC-TGAAA--------------TTGGAAG-AAAG--TCG--T----- Pecoramyces_sp._JQ934898 ATCCC-TGGA-------------TTATGAAAGAAAAG--TTG--T----- Pecoramyces_sp._JQ934900 ATCCC-TAGA-------------TTTTGGAAAAAGTGTTTTG--T----- Feramyces_sp._GQ600856 ATCCC-TAAAGAAAGG-------------TTGGATAA--GTG--T----- Feramyces_sp._GQ600920 ATCCC-TAAAGAAAGG-------------TTGGATAA--GTG--T----- Feramyces_sp._GQ796786 ATCCC-TAAAGAAAGG-------------TTGGATAA--GTG--T----- Feramyces_sp._GQ638131 ATCCC-TAAAAGGTTG-------------TTAAGTAT--T----T----- Feramyces_sp._GQ638316 ATCCC-TAAAGGGTTG-------------TTAAGTAT--T----T----- Neocallimastix_frontalis_AY429664 ATCCC-TAAAATTGG--------------TTTGTT--------------- Neocallimastix_sp._GQ850359 ATCCC-TAAAATTGG--------------TTTGTT--------------- Neocallimastix_sp._AY997064 ATCCC-TAAAATTGG--------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ782542 ATCCC-TAAAATTGG--------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ934903 ATCCC-TAAAATTGG--------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ934907 ATCCC-TAAAATTGG--------------TTTGTTTG--TTG--T----- Neocallimastix_patriciarum_AF170197 ATCCC-TTG----------------------------------------- Neocallimastix_frontalis_AF170196 TCCCC-TAAATTGGT--------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ934908 ATCCC-TAAATTGG---------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ934910 ATCCC-TAAATTGG---------------TTTGTTTG--TTG--T----- Neocallimastix_sp._JQ782547 ATCCC-TAAATTGG---------------TTTGTTTG--TTG--T----- Neocallimastix_sp._GQ607815 ATCCC-TGAGTTG-------------------------------T----- Neocallimastix_sp._GQ648894 ATCCC-TGAGTTG-------------------------------T----- Neocallimastix_sp._AM690052 ATCCC-TGAGAT-----------------GATGGTTG--TTG--T----- Neocallimastix_sp._AM690041 ATCCC-TAAGGT-----------------GATGATCG--TTG--T----- Neocallimastix_sp._GQ692728 ATCCA-AG---------------------TTGGAAAG--TTG--T----- Neocallimastix_sp._GQ815916 ATCCA-AG---------------------TTGGAAAG--TTG--T----- Neocallimastix_sp._AM690065 ATCCC-TGGATAG----------------TTGGTTTGA-GTG--T----- OOntomyces_sp._GQ826454 TTTTT----------TATTTTTTTTTTGATTGAATAG--TTT--T----- OOntomyces_sp._GQ591883 TTTTT----------TA-TTTTTTTTTGATTGAATAG--TTT-------- OOntomyces_anksri_JX017310 TTCCC-TTGGTT-----------------ATTATTGA--TTT--T----- Anaeromyces_sp._GQ857634 TTCCC-TGGAT------------------GTAAAAGT--TTG--T----- Anaeromyces_sp._FJ483846 TTCCC-TGGAT------------------GTAAAAGT--TTG--T----- Anaeromyces_sp._GQ850291 TTCCC-TGATG------------------TAAAAAGT--TTG-------- Liebetanzomyces_polymorphus_MH468765 TTCCC-TGATGTTT---------------AAAGGAAG--TTG--T----- Liebetanzomyces_polymorphus_MH468766 TTCCC-TGATGTTT---------------AAAGGAAG--TTG--T----- Anaeromyces_sp._JN560946 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._JN560949 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._JN205771 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._JN560950 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._AY429670 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._JN560943 TTCCC-TGAAATTG---------------GGAAGAAA--CTG--T----- Anaeromyces_sp._JN887638 TTCCC-TGAAATTG---------------GGAAGAAA--CTG--T----- Anaeromyces_sp._AY429669 TTCCC-TGAAATTG---------------TGAGGAG---CTG--T----- Anaeromyces_sp._JN887639 TTCCC-TGAAATTG---------------TGAGGAAA--CTG--T----- Anaeromyces_sp._JN560955 TTCCC-TGAAATTG---------------TGAGGAAA--CTG--T----- Anaeromyces_sp._JN227886 TTCCC-TGAAATTG---------------TGAGGAAA--CTG--T----- Anaeromyces_sp._JN560948 TTCCC-TGAAATTG---------------TGAGGAGC--TTG--T----- Anaeromyces_sp._JN560951 TTCCC-TGAAATTG---------------TGAGGAGC--TTG--T----- NG3_sp._GQ831317 TTTCC--------------------------------------------- NG3_sp._GQ829000 TTTCC--------------------------------------------- Monoblepharella_mexicana_AY997061 CTTTT-TTGCA------GCCGGGCTGGAGTTCAGTGC--TCTTTTTCTCC Monoblepharella_sp._AY997060 TTCAT-TGGAG------TTTTGAACGGCCCTTGGTCT--CCGTTTT---- Cyllamyces_aberensis_JN227893 -------------TAAAAGT----------T-TCGAA-----CCTTC-A- Cyllamyces_aberensis_AY997042 -------------TAAAAGT----------T-TCGAA-----CCTTC-A- Cyllamyces_aberensis_AM690060 -------------TAAAAGT----------T-TCGGA-----CCTTC-A- Cyllamyces_aberensis_JQ934921 -------------TAAAAGT----------T-TCGAA-----CCTTC-A- Cyllamyces_aberensis_JN227892 -------------TAAAAGT----------T-TCGAA-----CCTTC-A- Cyllamyces_aberensis_FJ483845 -------------TAAAAGT----------T-TCGAA-----CCTTC-A- Cyllamyces_sp._JN205759 -------------TTAAAGC----------A-AAATC-----AATCC-A- Cyllamyces_sp._JN205784 -------------TTAAAGC----------A-AAATC-----AATCC-A- Cyllamyces_sp._JQ934919 -------------TTAAAGC----------A-AAATC-----AATCC-A- Cyllamyces_sp._JN205788 -------------TTAAAGC----------A-AAATC-----AATCC-A- Cyllamyces_sp._AM690061 -------------TAAAAGT----------G-AAATC-----AATCC-A- Cyllamyces_sp._FJ501277 ------------AAAAAAGC----------A-AAATC----AAATTC-A- Cyllamyces_sp._EU043229 ------------AAAAAAGC----------A-AAATC----AAATTC-A- Cyllamyces_sp._AM690047 -------------TAAAAGC----------A-AAATC-----AAATC-A- Cyllamyces_sp._JN205786 -------------TGAAAGC----------G-AAATC------AATC-A- Caecomyces_sp._JQ782554 ---------------AAAGT----------G-AAACC------AGGC-A- Caecomyces_sp._JQ782555 ---------------AAAGT----------G-AAACC------AGGC-A- Caecomyces_sp._JQ934915 ---------------AAAGT----------G-AAACC------AGGC-A- Caecomyces_sp._GQ850297 --------------AAAAGC-----AGTTTG-AGACC----AAAATC-A- Caecomyces_sp._GQ850340 ---------------AAAAC----AGTTTG--AAACC---GAAAATC-A- Caecomyces_sp._JQ934926 -------------AAAAAGT----------GGAAACCA-AAAAATCC-A- Caecomyces_sp._GQ850290 ---------------AAAAC-----GTTTGG-AAACC---GAAAATC-A- Caecomyces_sp._JN205768 -------------TAAAAAC-----GTTTGG-AAGCC----AAAATC-A- Caecomyces_sp._JN205780 ---------------AAAAC-----GTTTGG-AAACC----AAAATC-A- Caecomyces_sp._JQ934924 ---------------AAAAC-----GTTTGG-AAACC-----AAATC-A- Caecomyces_sp._GQ630940 --------------GAAAGT----------G-AACTC---------C-T- Caecomyces_sp._AM690075 --------------GAAAGT----------G-AACTC---------CAA- Caecomyces_sp._GQ631455 --------------GAAAGT----------G-AACTC---------T-A- Caecomyces_sp._JQ934933 --------------AAAAGT----------G-AAGCC-------ATC-A- Caecomyces_sp._JQ934918 ---------------AAAGT----------G-AAACC------AGGC-A- Caecomyces_sp._JF974109 --------------AAAAGT----------G-AAGCC-------ATC-A- Caecomyces_sp._JQ934928 --------------AAAAGT----------G-AAACC-------ATC-A- Caecomyces_sp._GQ850302 --------------AAAAGT----------G-AAACC------AATC-A- Caecomyces_sp._JQ934930 --------------AAAAGT----------G-AAGCC-------ATC-A- Caecomyces_sp._JQ934931 ---------------AAAGT----------G-AAACC-------GGC-A- Caecomyces_sp._JQ934917 ---------------AAAGT----------G-AAACC-------GGC-A- Unknown_sp._GQ686304 --------------AAAAGAATT------CG-AAAAC-----ATCTAAA- Unknown_sp._GQ686301 --------------AAAAGA-----ATTACG-AAAACA---TACGTAAA- Piromyces_sp._GQ850318 --------------TAAGACAGT-------T-GAATT-------CAC-A- Piromyces_sp._JQ934935 --------------TAAGACAGT-------T-GAATT-------CAC-AG Piromyces_sp._JQ934934 --------------TAAGACAGT-------T-GAATT-------CAC-AG Piromyces_sp._GQ850360 --------------TCGGATGCA-------A-AAATT-------CGC-A- Piromyces_sp._JQ934936 --------------TCGGATGCA-------A-AAATT-------CAC-A- Piromyces_sp._JF423623 --------------TAAGAC-AA-------G-TGATT-------CGC-A- Piromyces_sp._FJ951427 --------------TAAAACTAA-------GTTGATT-------CCC-C- Piromyces_sp._JN227899 --------------TAAAACTAA-------GTTGATT-------CCC-C- Piromyces_sp._AF170206 --------------TCAGGG-------------AATT-------CGC-A- Piromyces_sp._JF974106 --------------TAATGGCAA-------G-TGATT-------CGC-A- Piromyces_sp._JN227888 --------------TAAGACTAA-------G-TGATT-------CTC-A- Piromyces_sp._GQ857641 --------------TAAGACTAA-------G-TGATT-------CTC-A- Piromyces_sp._AY429665 --------------TAAGACTAA-------G-TGATT-------CTC-A- Piromyces_sp._AF170207 --------------TA-G-ATA---------TTACTT----TTTTTT-A- Piromyces_sp._AF170203 --------------TGGATTATA-------GAAAAAAA---ATTCTC-A- Piromyces_sp._GQ850293 --------------AAAGAC-----TTTTTG-AAATT-------CTC-A- NG13_sp._GQ850296 --------------AAAGACT----TTTTTG-AAATT-------CTC-A- NG13_sp._JQ934938 --------------AAAGAC-----TTTTTG-AAATT-------CTC-A- Buwchfawromyces_eastonii_EU414758 ---------GAAAAAAAAGTA---GTTTTTG----------GAAGTT-A- Buwchfawromyces_eastonii_EU414759 ---------GAAAAAAAAGTA---GTTTTTG----------GAAGTT-A- Buwchfawromyces_eastonii_EU414755 ---------GAAAAAAAGGTAAT-GTTTTTG----------GAAGTT-A- Piromyces_sp._JN205774 -------------AAAAAACCAT-------G-AGATT------CACC-A- Piromyces_sp._JN205777 -------------AAAAAACCAT-------G-AGATA------CACC-A- Piromyces_sp._AF170204 --------------AAAGACT---G-TTTTG----------AATATT-A- Orpinomyces_sp._JN560944 --------------AAAGACT----TTTTCATT--------T-ACCA-A- Orpinomyces_sp._JN227887 --------------AAAGACT----TTTTCATT--------T-ACCA-A- Orpinomyces_sp._JN227895 --------------AAAGACT----TTTTCATT--------TAACCA-A- Orpinomyces_sp._JQ782553 --------------AAAGACT----TTTTTCAT-------TTAACCA-A- Orpinomyces_sp._JQ782551 --------------AAGAACT----TTTTTCCATTTTT-TATAACCA-A- Orpinomyces_sp._JN560942 --------------AAAAACT----TTTTCGAA----------TCCC-A- Orpinomyces_sp._JN560952 --------------AAAAACT----TTTTCGAA----------TCCC-A- Orpinomyces_sp._AY429673 --------------AAAAACT----TTTTCGAA----------TCCC-A- Orpinomyces_sp._JN227900 --------------AAAAACT----TTTTCGAA----------TCCC-A- Orpinomyces_sp._JN205762 --------------AAAAACT----TTTTCGGA----------TCCC-A- Orpinomyces_sp._JN205781 --------------AAAAACT----TTTTCGAA----------TCCC-A- Orpinomyces_sp._JN205790 --------------AAAAACT----TTTTCGAA--------T-CCTC-A- Orpinomyces_sp._JN205761 --------------AAAAACT----TTTTCGAA--------T-CCTC-A- Orpinomyces_sp._JN560953 --------------AAAAACT----TTTTCGAA--------T-CCTC-A- Orpinomyces_sp._JN887643 --------------AAAAACT----TTTTCGAA--------T-CCTC-A- Pecoramyces_ruminatium_KX961615 --------------TAAGATT----TTTTTT---------TCATTC--A- Pecoramyces_ruminatium_KX961613 --------------TAAGATT----TTTTTT---------TCATTC--A- Pecoramyces_ruminatium_KX961614 --------------TAAGATT----TTTTTT---------TCATTC--A- Pecoramyces_sp._JQ934898 -------------AAAAGACT----TTTTTT---------TCATTCT-A- Pecoramyces_sp._JQ934900 -----------AAAAAAGACT----TTTT-----------TCATTCT-A- Feramyces_sp._GQ600856 --------------AATAGCTTA-------AAAAAAAC-TTTTTTTT-A- Feramyces_sp._GQ600920 --------------AATAGCTTA-------AAAAAA---CTTTTTTT-A- Feramyces_sp._GQ796786 --------------AATAGCTTA-------AAAAAA----CTTTTTT-A- Feramyces_sp._GQ638131 --------------AATAAC-----------------------TTTT-A- Feramyces_sp._GQ638316 --------------AATAAC-----------------------TTTT-A- Neocallimastix_frontalis_AY429664 ------------------GTGAA-------ATGAATC----AAATTT-A- Neocallimastix_sp._GQ850359 ------------------GTGAA-------ATGAATC----AAATTT-A- Neocallimastix_sp._AY997064 --------------AAAAGACAA-------GTGAATC-----AATTT-A- Neocallimastix_sp._JQ782542 --------------AAAAGACAA-------GTGAATC----AAATTT-A- Neocallimastix_sp._JQ934903 --------------AAAAGACAA-------GTGAATC-----AATTT-A- Neocallimastix_sp._JQ934907 --------------AAAAGACAA-------GTGAATC-----AATTT-A- Neocallimastix_patriciarum_AF170197 --------------GAAAGTTT--------GTTCATT---TAAACCC-A- Neocallimastix_frontalis_AF170196 -------------AAAAAGACAA--------TG--------ATCATT-T- Neocallimastix_sp._JQ934908 --------------AAAAGACAA-------GTGAATC------ATTT-A- Neocallimastix_sp._JQ934910 --------------AAAAGACAA-------GTGAATC------ATTT-A- Neocallimastix_sp._JQ782547 --------------AAAAGACAA-------GTGAATC------ATTT-A- Neocallimastix_sp._GQ607815 -------------AAGAAGTA-----------AAATTCTGAAAGCTT-A- Neocallimastix_sp._GQ648894 -------------AAGAAGTA-----------AAATTCTGAAAGCTT-A- Neocallimastix_sp._AM690052 --------------AAAAGAC------------AATTT-GAAGTCTT-A- Neocallimastix_sp._AM690041 --------------AAAAGAT-----------GATTTG--AAGTCTT-A- Neocallimastix_sp._GQ692728 --------------AAAAGACTC-G-------AAGAC--------CT--- Neocallimastix_sp._GQ815916 -------------AAAAAGACTC-G-------AAGAC--------TT--- Neocallimastix_sp._AM690065 --------------AAAAGC----------GAAGACCG---ACTTTC-A- OOntomyces_sp._GQ826454 --------------AAATATTTA-------AGAAAGAAAAAAAAAAG-A- OOntomyces_sp._GQ591883 --------------AAATGTTTA-------AGAAGAAAAGAAAAAAG-A- OOntomyces_anksri_JX017310 --------------GAGAGTTTTTGCTTTTGAAAGAAA---TAAGCCAA- Anaeromyces_sp._GQ857634 --------------AAAAGA-------------ACTTT---TACTTC-A- Anaeromyces_sp._FJ483846 --------------AAAAGA-------------ACTTT---TACTTC-A- Anaeromyces_sp._GQ850291 -------------AAAAAGCTTT------------------TTACTC-A- Liebetanzomyces_polymorphus_MH468765 --------------AAAAGAC----TTTCT----------TTAACTC-A- Liebetanzomyces_polymorphus_MH468766 --------------AAAAGAC----TTTCT----------TTAACTC-A- Anaeromyces_sp._JN560946 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._JN560949 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._JN205771 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._JN560950 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._AY429670 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._JN560943 --------------AATGGTG------------AATTG---CAATTCCG- Anaeromyces_sp._JN887638 --------------AATGGTG------------AATTG---CAATTCCG- Anaeromyces_sp._AY429669 --------------AATGGTA------------ACTTG---CAATTC-A- Anaeromyces_sp._JN887639 --------------AATGGTG------------AATTG---CAATTC-A- Anaeromyces_sp._JN560955 --------------AATGGTG------------AATTG---CAATTC-A- Anaeromyces_sp._JN227886 --------------AATGGTG------------AATTG---CAATTCCA- Anaeromyces_sp._JN560948 --------------AATGGTG------------ACTTG---CAATTCCA- Anaeromyces_sp._JN560951 --------------AATGGTG------------ACTTG---CAATTCCA- NG3_sp._GQ831317 ------------------------------------------------AG NG3_sp._GQ829000 ------------------------------------------------AG Monoblepharella_mexicana_AY997061 TGCATAAGGTTAAAAAAAGCCT--------------------AGCTC-A- Monoblepharella_sp._AY997060 ------------------------------GAG-------CCAACCT-G- Cyllamyces_aberensis_JN227893 -GGGGAATGGCA-------------------------------------- Cyllamyces_aberensis_AY997042 -GGGGAATGGCA-------------------------------------- Cyllamyces_aberensis_AM690060 -GGGGAATGGCA-------------------------------------- Cyllamyces_aberensis_JQ934921 -GGGGAATGGCA-------------------------------------- Cyllamyces_aberensis_JN227892 -GGGGAATGGCA-------------------------------------- Cyllamyces_aberensis_FJ483845 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._JN205759 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._JN205784 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._JQ934919 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._JN205788 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._AM690061 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._FJ501277 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._EU043229 -GGGGAATGGCA-------------------------------------- Cyllamyces_sp._AM690047 -GGGGAATGGCG-------------------------------------- Cyllamyces_sp._JN205786 -GGGGAATGGCA-------------------------------------- Caecomyces_sp._JQ782554 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Caecomyces_sp._JQ782555 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Caecomyces_sp._JQ934915 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Caecomyces_sp._GQ850297 -GGGGAATGGTATTCA------TTAA--TT-------TTTTT-------- Caecomyces_sp._GQ850340 -GGGGAATGGTATTCA------TTAA--TT-------TTTTT-------- Caecomyces_sp._JQ934926 -GGGGAATGGTATTCA---------------------------------- Caecomyces_sp._GQ850290 -GGGGAATGGTATTCAT-----ATAA--TT-------TTTTT-------- Caecomyces_sp._JN205768 -GGGGAATGGTATTCAT-----ATAATTTT-------TTTTT-------- Caecomyces_sp._JN205780 -GGGGAATGGTATTCAT-----ATAA-TTT-------TTTTT-------- Caecomyces_sp._JQ934924 -GGGGAATGGTATTCAT-----ATAA-T---------TTTTT-------- Caecomyces_sp._GQ630940 -AGGGAATGGCAGACG------ATAA-TAT-------TT----------- Caecomyces_sp._AM690075 -GGGGAATGGCAAACA------ATAA-TAT-------TT----------- Caecomyces_sp._GQ631455 -GGGGAATGGCAAACA------ATAA-TAT-------TT----------- Caecomyces_sp._JQ934933 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTG-------- Caecomyces_sp._JQ934918 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Caecomyces_sp._JF974109 -GGGGAATGGCAAACA------ATAA-TTC--------TTTT-------- Caecomyces_sp._JQ934928 -GGGGAATGGCAAACA------ATAA-TTT-------ATTTT-------- Caecomyces_sp._GQ850302 -GGGGAATGGCAAACA------ATAA-TTA--------TTTT-------- Caecomyces_sp._JQ934930 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTG-------- Caecomyces_sp._JQ934931 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Caecomyces_sp._JQ934917 -GGGGAATGGCAAACA------ATAA-TTA-------TTTTT-------- Unknown_sp._GQ686304 -GGGGATGG-------------TCAA-TAA-------TTTTTTT------ Unknown_sp._GQ686301 -GGGGATGG-------------TCAA-TTTA----ATTTTTTT------- Piromyces_sp._GQ850318 -GGGAATAG-------------TCAG-TAA-------TTTTTT------- Piromyces_sp._JQ934935 GGGGGATAG-------------TCAG-TAA-------TTTTTT------- Piromyces_sp._JQ934934 GGGGGATAG-------------TCAG-TAA-------TTTTTT------- Piromyces_sp._GQ850360 -GGGGATAG-------------TCAG-TAA-------TTTTT-------- Piromyces_sp._JQ934936 -GGGGATAG-------------TCAG-TAA-------TTTTT-------- Piromyces_sp._JF423623 -GGGGATAG-------------TCAG-TAA-------TTTTT-------- Piromyces_sp._FJ951427 -GGGGAAAA-------------TCCA-TAA-------TTTTT-------- Piromyces_sp._JN227899 -GGGGAAAA-------------TCCA-TAA-------TTTTT-------- Piromyces_sp._AF170206 -GGGGAGTG-------------TCAG-TAA-------TTTTT-------- Piromyces_sp._JF974106 -GGGGAGTG-------------TCAA-TAA-------TTTTT-------- Piromyces_sp._JN227888 -GGTGATTG-------------TCAA-TAA-------TTTTT-------- Piromyces_sp._GQ857641 -GGTGATTG-------------TCAA-TAA-------TTTTT-------- Piromyces_sp._AY429665 -GGTGATAG-------------TCAA-TAA-------TTTTT-------- Piromyces_sp._AF170207 -GGGAATAGATT----------TTAA-TAA-------TTTTTTCA----- Piromyces_sp._AF170203 -GGGACTAG-------------TCAA-TAA-------TTT---------- Piromyces_sp._GQ850293 -GGGGATAG-------------TCAA-TAA-------TTTTT-------- NG13_sp._GQ850296 -GGGGATAG-------------TCAA-TAA-------TTTTT-------- NG13_sp._JQ934938 -GGGGATAG-------------TCAA-TAA-------TTTTT-------- Buwchfawromyces_eastonii_EU414758 -GGGGATAGACTTTAAT--------------------------------- Buwchfawromyces_eastonii_EU414759 -GGGGATAGACTTTAAT--------------------------------- Buwchfawromyces_eastonii_EU414755 -GGGGATAGACTTTAAT--------------------------------- Piromyces_sp._JN205774 -GGGGATAG-------------TAAC-T---------TTTCT-------- Piromyces_sp._JN205777 -GGGGATAG-------------TAAT-T---------TTTCT-------- Piromyces_sp._AF170204 -GGGGATAGATTTTTTTC--AGGGAA-TAG------------------GC Orpinomyces_sp._JN560944 -GGGAATAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN227887 -GGGAATAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN227895 -GGGAATAGGCTTTCAT--------------------------------- Orpinomyces_sp._JQ782553 -GGGAATAGGCTTTCAT--------------------------------- Orpinomyces_sp._JQ782551 -GGGAATAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN560942 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN560952 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._AY429673 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN227900 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN205762 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN205781 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN205790 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN205761 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN560953 -GGGACTAGGCTTTCAT--------------------------------- Orpinomyces_sp._JN887643 -GGGACTAGGCTTTCAT--------------------------------- Pecoramyces_ruminatium_KX961615 -GGGAATAGGCTTTC-T--------------------------------- Pecoramyces_ruminatium_KX961613 -GGGAATAGGCTTTCAT--------------------------------- Pecoramyces_ruminatium_KX961614 -GGGAATAGGCTTTCAT--------------------------------- Pecoramyces_sp._JQ934898 -GGGAATAGGCTTTCAT--------------------------------- Pecoramyces_sp._JQ934900 -GGGAATAGGCTTTCAT--------------------------------- Feramyces_sp._GQ600856 -GGGAATGG----------------------------------------- Feramyces_sp._GQ600920 -GGGAATGG----------------------------------------- Feramyces_sp._GQ796786 -GGGAATGG----------------------------------------- Feramyces_sp._GQ638131 -GGGAATGG----------------------------------------- Feramyces_sp._GQ638316 -GGGAATGG----------------------------------------- Neocallimastix_frontalis_AY429664 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_sp._GQ850359 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_sp._AY997064 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_sp._JQ782542 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_sp._JQ934903 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_sp._JQ934907 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_patriciarum_AF170197 -GGGAATAGGCTTTCA------TAAA-TAA-------GTTTTTTTTAAAG Neocallimastix_frontalis_AF170196 -AGGAATAGGCTTTCAT-------AA-TAA-------GTTTTTTTTAAGT Neocallimastix_sp._JQ934908 -GGGAATAGGCTTTCC------TAAA-TAGTTGA--TTTTTTTTCCAATG Neocallimastix_sp._JQ934910 -GGGAATAGGCTTTCC------TAAA-TAATTGATTTTTTTTTTCCAATG Neocallimastix_sp._JQ782547 -GGGAATAGGCTTTCC------TAAA-TAATTGA--TTTTTTTTCCTATG Neocallimastix_sp._GQ607815 -GGGAATAGGCTTTATCT---ATAAA-TAA-----------------TGA Neocallimastix_sp._GQ648894 -GGGAATAGGCTTTATCT---ATAAA-TAA-----------------TGA Neocallimastix_sp._AM690052 -GGGAATAGGCTTTA-------TAAA-TAA-------TTTT--------- Neocallimastix_sp._AM690041 -GGGAATAGGCTTTCCT-----AAAA-TAA-------TTTTT-------- Neocallimastix_sp._GQ692728 --GGAGTCGGCA----------TAAA-TAAG------------------- Neocallimastix_sp._GQ815916 --GGAG-CGGCA----------TAAA-TAAA------------------- Neocallimastix_sp._AM690065 -GGGAATAG--TATA-------TAAT-TAA-------TTTTT-------C OOntomyces_sp._GQ826454 -GGGGATAAGATTTC----------------------------------- OOntomyces_sp._GQ591883 -GGGGATAAGATTTC----------------------------------- OOntomyces_anksri_JX017310 -GGGGATAGATTTTA-------TAAG-TAA-------TTTTTT------- Anaeromyces_sp._GQ857634 -GGGGATAG--------------TAA-TAA-------TTTTTT------- Anaeromyces_sp._FJ483846 -GGGGATAG--------------TAA-TAA-------TTTTTT------- Anaeromyces_sp._GQ850291 -GGGGATAGATT----------TTAA-TAA-------TTTTTT------- Liebetanzomyces_polymorphus_MH468765 -GGGGATAGATTTTTT------CAAA-TAA-------TTTTTTG------ Liebetanzomyces_polymorphus_MH468766 -GGGGATAGATTTTTT------CAAA-TAA-------TTTTTTG------ Anaeromyces_sp._JN560946 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560949 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN205771 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560950 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._AY429670 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560943 -GGGGAAAATTTTT--------CTAT-TAT-------TTTTTT------- Anaeromyces_sp._JN887638 -GGGGAAAATTTTT--------CTAT-TAT-------TTTTTT------- Anaeromyces_sp._AY429669 -GGGGATAGATTTT--------CGAG-TAA-------TTTTTT------- Anaeromyces_sp._JN887639 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560955 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN227886 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560948 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- Anaeromyces_sp._JN560951 -GGGGATAGATTTT--------CTAG-TAA-------TTTTTT------- NG3_sp._GQ831317 TGGAGCTAAGTTTTTAGTGAAACTGG-TTA-------------------- NG3_sp._GQ829000 TGGAGCTAAGTTTTTAGTGAAACTGG-TTA-------------------- Monoblepharella_mexicana_AY997061 -TGAGGCGGCCAGCCCG--------------------------------- Monoblepharella_sp._AY997060 -CCAGAGGGCTTTTCGG--------------------------------- Cyllamyces_aberensis_JN227893 -------AA-A--CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_aberensis_AY997042 -------AA-A--CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_aberensis_AM690060 -------AA-A--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_aberensis_JQ934921 -------AA-A--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_aberensis_JN227892 -------AA-A--CTTTTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_aberensis_FJ483845 -------AA-A--CTTTTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._JN205759 -------AA-A--CTTTTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._JN205784 -------AA-A--CTTTTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._JQ934919 -------AA-A--CT-TTTTTT---AAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._JN205788 -------AA-A--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._AM690061 -------AA-A--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._FJ501277 -------AA-A-CCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._EU043229 -------AA-A-CCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._AM690047 -------AA-A-CCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Cyllamyces_sp._JN205786 -------AA-A--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ782554 -GAAAAAAA-GACCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ782555 -GAAAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ934915 -GAAAAAAG-A-CCT-TTTTTT--AAAATTAGAC-TTTTTGCG----TAT Caecomyces_sp._GQ850297 -ATAAAA-G-A-CCT-TTTTTT--AAAATTAAAC-ATTTT--G----TAT Caecomyces_sp._GQ850340 -ATAAAA-G-A-CCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ934926 --------G-A--CC-TTTTTT--TAAATTAAAC-TTTAT--G----TAT Caecomyces_sp._GQ850290 -ATAAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JN205768 -ATAAAAAG-A--CC-TTTTTT--AAAATTAAAC-ATTTT--G----TAT Caecomyces_sp._JN205780 -ATAAAAAG-A--CC-TTTTTT--AAAATTAAAC-ATTTT--G----TAT Caecomyces_sp._JQ934924 -ATTAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._GQ630940 ---AAAGAC-T--TT-TTTTTA--AAAATAAAAC-TTTTT--G----CAT Caecomyces_sp._AM690075 ---AAAGAC-T--TT-TTTTTT--AAAATAAAAC-TTTTT--G---TTAT Caecomyces_sp._GQ631455 ---AAAGAC----CT-TTTTTT--AAAATAAAAC-TTTTT--G----TAT Caecomyces_sp._JQ934933 ---AAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ934918 -GAAAAAAA-GACCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JF974109 -GAAAAAAG-A--CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Caecomyces_sp._JQ934928 -GAAAAAAG-A-CCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._GQ850302 -GAAAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTAT--G----TAT Caecomyces_sp._JQ934930 ---AAAAAG-A--CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Caecomyces_sp._JQ934931 -GAAAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Caecomyces_sp._JQ934917 -GAAAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Unknown_sp._GQ686304 -TGAAAAAG-A--CA-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Unknown_sp._GQ686301 -AGAAAAAG-A--CT-ATTTTT--AAAATTTTAA-ACTTT--T----TGT Piromyces_sp._GQ850318 -TAAAAAGA-C--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JQ934935 -TAAAAAGA-C--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JQ934934 -TAAAAAGA-C--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._GQ850360 ---AAAAAA-GACCT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JQ934936 ---AAAAAG-A--CC-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JF423623 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Piromyces_sp._FJ951427 --AAAAAAA-A--CT-TTTTTT---AAATTAAACTTTTTT--G----GAT Piromyces_sp._JN227899 --AAAAAAA-A--CT-TTTTTT---AAATTAAACTTTTTT--G----GAT Piromyces_sp._AF170206 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC--TTTT--G----TAT Piromyces_sp._JF974106 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JN227888 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Piromyces_sp._GQ857641 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Piromyces_sp._AY429665 ---AAAAAG-A--CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Piromyces_sp._AF170207 GTGAAAAGA-C--CA-TTTTTT--TAAATTAAAC--ATTG--G----TAT Piromyces_sp._AF170203 GAAAAAAAG-C--CA-TTTTTT--TAAATTAAAC--ATTA--A----TCT Piromyces_sp._GQ850293 -AAAAAAGA-C--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT NG13_sp._GQ850296 -AAAAAAGA-C--CT-TTTTTT--AAAATTAAACTTTTTT--G----TAT NG13_sp._JQ934938 -AAAAAAGA-C--CT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Buwchfawromyces_eastonii_EU414758 ------AGA----CT-TTTTTT--TAAATAAAAC-TTTAT--G----TAT Buwchfawromyces_eastonii_EU414759 ------AGA----CT-TTTTTT--TAAATAAAAC-TTTAT--G----TAT Buwchfawromyces_eastonii_EU414755 ------AGACT--TT-TTTTTT--AAAATAAAAC-TTTTT--G----TAT Piromyces_sp._JN205774 -TAAAAAGA-C--TT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._JN205777 -TAAAAAGA-C--TT-TTTTTT--AAAATTAAAC-TTTTT--G----TAT Piromyces_sp._AF170204 TTTTAAAGA----CC-TTTTTT--TAAATTAAAC--TTTG--G----TAT Orpinomyces_sp._JN560944 ------AGA----CA-TTTTTT--TAAATTAAAC--ATTT--G----TAT Orpinomyces_sp._JN227887 ------AGA----CA-TTTTTT--TAAATTAAAC--ATTT--G----TAT Orpinomyces_sp._JN227895 ------AGA----CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JQ782553 ------AGA----CC-TTTTTT--CAAATTAAAC--ATTT--G----TAT Orpinomyces_sp._JQ782551 ------AGA-C--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN560942 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN560952 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._AY429673 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN227900 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN205762 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN205781 ------AGA----CT-TTTTTT--TAAATTAAAC--TTTT--G----TGT Orpinomyces_sp._JN205790 ------AGA-C--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN205761 ------AGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Orpinomyces_sp._JN560953 ------AGA----CC-TTTTTT--TAAATTCAAC-TTTTT--G----TAT Orpinomyces_sp._JN887643 ------AGA----CC-TTTTTT--TAAATTCAAC-TTTTT--G----TAT Pecoramyces_ruminatium_KX961615 ------AGA----CA---TTTT--TAAATTAAAC-TTTTT--G----TAT Pecoramyces_ruminatium_KX961613 ------AGA----CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Pecoramyces_ruminatium_KX961614 ------AGA----CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Pecoramyces_sp._JQ934898 ------AGA----CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Pecoramyces_sp._JQ934900 ------AGA----CA-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Feramyces_sp._GQ600856 -CTTAAAGA-C--TT-TTATTT--AAAATTAAAC-TTTTT--G----TAT Feramyces_sp._GQ600920 -CTTAAAGA-C--TT-TTATTT--AAAATTAAAC-TTTTT--G----TAT Feramyces_sp._GQ796786 -CTTAAAG--C--TT-TTATTT--AAAATTAAAC-TTTTT--G----TAT Feramyces_sp._GQ638131 -CTTAAAGA-C--TT-TTATTTTAAAATTAAACT-TTTTT--G----TAT Feramyces_sp._GQ638316 -CTTAAAGA-C--TT-TTATTT--AAAATTAAAC-TTTTT--G----TAT Neocallimastix_frontalis_AY429664 TCTTAAAGA----CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._GQ850359 TCTTAAAGA----CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._AY997064 TCTTAAAGA----CCTTTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._JQ782542 TCTTAAAGA----CCTTTTTTT--AAAATTAAAC-TTTTT--G----TAT Neocallimastix_sp._JQ934903 TCTTAAAGA----CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._JQ934907 TCTTAAAGA----CC-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_patriciarum_AF170197 TCTTAAAAG-A-----CCTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_frontalis_AF170196 CTTAAAAGG-A--CT-TTTTTT--AAAATTAAAC---TTT--G----TAT Neocallimastix_sp._JQ934908 TCTTAAAAGAC--CT-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._JQ934910 TCTTAAAAGAC--CT-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._JQ782547 TCTTAAAAGAC--CT-TTTTTT--AAAATTAAAC--TTTT--G----TAT Neocallimastix_sp._GQ607815 TTTTAAAGA-C--CT-TTTTTT--TAAATTAAAC--ATTT--G----TAT Neocallimastix_sp._GQ648894 TTTTAAAGA----CC-TTTTTT--TAAATTAAAC--ACTT--G----TAT Neocallimastix_sp._AM690052 ATTTAAAGA----CC-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Neocallimastix_sp._AM690041 ATTTAAAGA-C--CT-TTTTTT--TAAATTAAAC-TTTTT--G----TAT Neocallimastix_sp._GQ692728 -TTTAAAGA-C--TT-TTTTCT--AAAATTAAAC-TTTTT--G----TAT Neocallimastix_sp._GQ815916 -TTTAAAGA-C--TT-TTTTCT--AAAATTAAAC-TTTTT--G----TAT Neocallimastix_sp._AM690065 ATTTAAAGA----CC-TTTTTT--TAAATTAA---CATTT--G----TAT OOntomyces_sp._GQ826454 ------AAA-C--TT-TTTTTT--AAAATAAAAC-ATTTG--T----TAT OOntomyces_sp._GQ591883 ------AAA-C--TT-TTTTTT--AAAATAAAAC-ATTTG--T----TAT OOntomyces_anksri_JX017310 -AGGAAAGA-C--CT-TTTTTT--AAAATTTAAC-ATTTT--G----TAT Anaeromyces_sp._GQ857634 ---AAAAAG-A--CC-TTTTTT--TAAATAAAAC-TTTTT--G----TAT Anaeromyces_sp._FJ483846 ---AAAAAG-A--CC-TTTTTT--TAAATAAAAC-TTTTT--G----TAT Anaeromyces_sp._GQ850291 ---AAAAGA----CC-TTTTTT--TAAATAAAAC-TTTTT--G----TAC Liebetanzomyces_polymorphus_MH468765 -ATAAAGAC-C--TT-TTTTTT--TAAATAAAAC-TTTTT--G----TAT Liebetanzomyces_polymorphus_MH468766 -ATAAAGAC-C--TT-TTTTTT--TAAATAAAAC-TTTTT--G----TAT Anaeromyces_sp._JN560946 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN560949 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN205771 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN560950 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._AY429670 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN560943 -AGGAAAAA----CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN887638 -AGGAAAAA----CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._AY429669 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTTC--G----TAT Anaeromyces_sp._JN887639 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN560955 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN227886 -AGGAAAGA----CC-TTTTTT--AAAATAAAAC-TTTAT--G----TAT Anaeromyces_sp._JN560948 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTTT--G----TAT Anaeromyces_sp._JN560951 -AGGAAAGA-C--CT-TTTTTT--AAAATAAAAC-TTTTT--G----TAT NG3_sp._GQ831317 -GGTATAAA-C--TT-TTTTTT--AATATAACGT-TTTGT--G------- NG3_sp._GQ829000 -GGTATAAA-C--TT-TTTTTT--AATATAACGT-TTTGT--G------- Monoblepharella_mexicana_AY997061 -CCAGAGGA-C--TT-TTTTTA--AACACTTC---TGCTT--GAA-CCTT Monoblepharella_sp._AY997060 -AGCCCGAA-A--CC-AATTTT--AACACT-----TGCTT--GAACCATT Cyllamyces_aberensis_JN227893 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_aberensis_AY997042 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_aberensis_AM690060 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_aberensis_JQ934921 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_aberensis_JN227892 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_aberensis_FJ483845 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._JN205759 TCACTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._JN205784 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._JQ934919 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._JN205788 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._AM690061 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._FJ501277 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._EU043229 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._AM690047 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Cyllamyces_sp._JN205786 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ782554 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ782555 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934915 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ850297 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ850340 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934926 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ850290 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JN205768 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JN205780 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934924 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ630940 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._AM690075 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ631455 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934933 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934918 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JF974109 TCATTTGTTT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934928 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._GQ850302 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934930 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934931 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Caecomyces_sp._JQ934917 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Unknown_sp._GQ686304 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Unknown_sp._GQ686301 TATTCTATTTGTACT--AAAAATTT--ATTT------TTATAATAATAAA Piromyces_sp._GQ850318 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JQ934935 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JQ934934 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Piromyces_sp._GQ850360 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JQ934936 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JF423623 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._FJ951427 TCCTTTGTCC---------AAAATT--ATTT------TTATAATA--AAA Piromyces_sp._JN227899 TCCTTTGTCC---------AAAATT--ATTT------TTATAATA--AAA Piromyces_sp._AF170206 TCATTTGTCT---------AAAATTTATTTT------TAATAATA--TAA Piromyces_sp._JF974106 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JN227888 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._GQ857641 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._AY429665 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Piromyces_sp._AF170207 TCATTTGTCT---------AAATTG-TATTT------TTAATAAT--TAA Piromyces_sp._AF170203 TCATTTGTCT---------AAATTT--ATTT------TTATAATA--TAA Piromyces_sp._GQ850293 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA NG13_sp._GQ850296 TCATTTGTCT--------AAAAATT--ATTTT--TTATTAATATA--AAA NG13_sp._JQ934938 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Buwchfawromyces_eastonii_EU414758 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Buwchfawromyces_eastonii_EU414759 TCATTTGTCT---------AAAATT--ATTT------TTATAATA--TAA Buwchfawromyces_eastonii_EU414755 TCATTTGTCT---------AAAATT-TATTT------TTATAATA--TAA Piromyces_sp._JN205774 TCATTTGTCT--------AAAAATT--ATTT------TTATAATA--TAA Piromyces_sp._JN205777 TCATTTGTCT-------AAAAAATT--ATTT------TTATAATA--TAA Piromyces_sp._AF170204 TCATTTGTCT---------AAATTT--ATTT-----TTTATAATA--TAA Orpinomyces_sp._JN560944 TCATTTGTCT---------AAA-TT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN227887 TCATTTGTCT---------AAA-TT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN227895 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JQ782553 TCATTTGTCT---------AAA-TT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JQ782551 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Orpinomyces_sp._JN560942 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN560952 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._AY429673 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN227900 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN205762 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN205781 TCATTTGTCT---------AAAACT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN205790 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN205761 TCATTTGTCT---------AAAAAT-TATTT-----TT-ATAATA--TAA Orpinomyces_sp._JN560953 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Orpinomyces_sp._JN887643 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--AAA Pecoramyces_ruminatium_KX961615 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Pecoramyces_ruminatium_KX961613 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Pecoramyces_ruminatium_KX961614 TCATTTGTCT---------AAAATT-TATTT----TTAAATAA?T--TAA Pecoramyces_sp._JQ934898 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Pecoramyces_sp._JQ934900 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Feramyces_sp._GQ600856 TCATTTGTCT---------AAAATTAAATTTTTAAATAAATAATT--TAA Feramyces_sp._GQ600920 TCATTTGTCT---------AAAATTAAATTTTTAAATAAATAATT--T-A Feramyces_sp._GQ796786 TCATTTGTCT---------AAAATTAAATTTTTAAATAAATAATT--TAA Feramyces_sp._GQ638131 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Feramyces_sp._GQ638316 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Neocallimastix_frontalis_AY429664 TCATTTGTCT---------AAATC---TTTT---TTTAAATAATT--TAA Neocallimastix_sp._GQ850359 TCATTTGTCT---------AAAT----TTTT---TTTAAATAATT--TAA Neocallimastix_sp._AY997064 TCATTTGTCT---------AAATT---TTTT---TTAAAATAATT--TAA Neocallimastix_sp._JQ782542 TCATTTGTCT---------AAAATT--TTTT----TTAAATAATT--TAA Neocallimastix_sp._JQ934903 TCATTTGTCT---------AAAATT--TTTT---TTAAAATAATT--TAA Neocallimastix_sp._JQ934907 TCATTTGTCT---------AAAATT--TTTT---TTAAAATAATT--TAA Neocallimastix_patriciarum_AF170197 TC-TTTGTCT---------AAAATT-TTTTT---TTTAAATAATT--TAA Neocallimastix_frontalis_AF170196 TCATTTCTCT---------AAATTT--TTTT----TTAAATAAT---TAA Neocallimastix_sp._JQ934908 TCATTTGTCT---------AAAATA--ATTT---TTAAAATAATT--TAA Neocallimastix_sp._JQ934910 TCATTTGTCT---------AAAATA--ATTT---TTAAAATAATT--TAA Neocallimastix_sp._JQ782547 TTATTTGTCT---------AAAATA--ATTT---TTAAAATAATT--TAA Neocallimastix_sp._GQ607815 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Neocallimastix_sp._GQ648894 TCATTTGTCT---------AAAATT-TATTT-----TTAATAATT--TAA Neocallimastix_sp._AM690052 TCATTTGTCT---------AAATTT--ATTT-----TTAATAATT--TAA Neocallimastix_sp._AM690041 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA Neocallimastix_sp._GQ692728 TCATTTGTCT---------AAAATA--ATTT----TTATAATTTA--TAA Neocallimastix_sp._GQ815916 TCATTTGTCT---------AAAATA--ATTT----TTATAATATA--TAA Neocallimastix_sp._AM690065 TCATTTGTCT---------AAAATT-TATTT----TTAAATAATT--TAA OOntomyces_sp._GQ826454 TCATTTGTCT---------TAAATA-AATTTTT-AAATAATAATT--TAA OOntomyces_sp._GQ591883 TCATTTGTCT---------TAAATA-AATTTTT-AAATAATAATT--TAA OOntomyces_anksri_JX017310 TCATTTGTCT---------AAAATA--ATTT---TTAAAATAATT--TAA Anaeromyces_sp._GQ857634 TTATTTGTCT---------AAAAAT--TTTT---TTAAAATAATT--TAA Anaeromyces_sp._FJ483846 TCATTTGTCT---------AAAAAT--TTTT---TTAAAATAATT--TAA Anaeromyces_sp._GQ850291 TCATTTGTCT---------AAAAAT--TTTA---AATTAATAATT--TAA Liebetanzomyces_polymorphus_MH468765 TCATTTGTCT---------AAAAAAAAATTTTT-ATAAAATAATA--TAA Liebetanzomyces_polymorphus_MH468766 TCATTTGTCT---------AAAAAAAAATTTTT-ATAAAATAATA--TAA Anaeromyces_sp._JN560946 TCATTTGTCT---------AAAAAA-AATTTTT-AAATAATAATT--TAA Anaeromyces_sp._JN560949 TCATTTGTCT---------AAAAAA-AATTTTT-AAATAATAATT--TAA Anaeromyces_sp._JN205771 TCATTTGTCT---------AAAAAA-AATTTTT-AAATAATAATT--TAA Anaeromyces_sp._JN560950 TCATTTGTCT---------AAAAAA-AATTTTT-AAATAATAATT--TAA Anaeromyces_sp._AY429670 TCATTTGTCT---------AAAAAA-AATTTTT-AAATAATAATT--TAA Anaeromyces_sp._JN560943 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN887638 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Anaeromyces_sp._AY429669 TCATTTGTCT---------AAAAAA--ATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN887639 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN560955 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN227886 TCATTTGTCT---------AAAAAA-AATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN560948 TCATTTGTCT---------AAAAAA--ATTTTTAAATAAATAATT--TAA Anaeromyces_sp._JN560951 TCATTTGTCT---------AAAAAA--ATTTTTAAATAAATAATT--TAA NG3_sp._GQ831317 TGATCTGTCT---------GAAAAA-AATTGT--------TAAAT--TAA NG3_sp._GQ829000 TGATCTGTCT---------GAAAAA--ATTGT--------TAAAT--TAA Monoblepharella_mexicana_AY997061 GTATCTGTCTGAAAC-----AAAAC--GTTT--AAAACTTAAATG--TGA Monoblepharella_sp._AY997060 TTACCTGTCTGAAACTTGTAAAATC--ATTT-----TAACAAATG--AAT Cyllamyces_aberensis_JN227893 AAA-CAACTTTTGACAATGGATCT Cyllamyces_aberensis_AY997042 AAA-CAACTTTTGACAATGGATCT Cyllamyces_aberensis_AM690060 AAA-CAACTTTTGACAATGGATCT Cyllamyces_aberensis_JQ934921 AAA-CAACTTTTGACAATGGATCT Cyllamyces_aberensis_JN227892 AAA-CAACTTTTGACAATGGATCT Cyllamyces_aberensis_FJ483845 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._JN205759 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._JN205784 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._JQ934919 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._JN205788 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._AM690061 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._FJ501277 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._EU043229 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._AM690047 AAA-CAACTTTTGACAATGGATCT Cyllamyces_sp._JN205786 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ782554 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ782555 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934915 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ850297 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ850340 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934926 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ850290 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JN205768 AAA-CAACTTTTGACAATGGGTCT Caecomyces_sp._JN205780 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934924 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ630940 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._AM690075 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ631455 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934933 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934918 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JF974109 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934928 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._GQ850302 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934930 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934931 AAA-CAACTTTTGACAATGGATCT Caecomyces_sp._JQ934917 AAA-CAACTTTTGACAATGGATCT Unknown_sp._GQ686304 AAA-CAACTTTTGACAATGGATCT Unknown_sp._GQ686301 AAC-TAACTTTTGACAATGGATCT Piromyces_sp._GQ850318 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JQ934935 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JQ934934 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._GQ850360 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JQ934936 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JF423623 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._FJ951427 AAA-CAACTTTTGACAATGGATCC Piromyces_sp._JN227899 AAA-CAACTTTTGACAATGGATCC Piromyces_sp._AF170206 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JF974106 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JN227888 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._GQ857641 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._AY429665 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._AF170207 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._AF170203 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._GQ850293 AAA-CAACTTTTGACAATGGATCT NG13_sp._GQ850296 AAC-AACTTTTTGACAATGGATCT NG13_sp._JQ934938 AAA-CAACTTTTGACAATGGATCT Buwchfawromyces_eastonii_EU414758 AAA-CAACTTTTGACAATGGATCT Buwchfawromyces_eastonii_EU414759 AAA-CAACTTTTGACAATGGATCT Buwchfawromyces_eastonii_EU414755 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JN205774 AAA-CAACTTTTGACAATGGATCT Piromyces_sp._JN205777 AAA-CAACCTTTGACAATGGATCT Piromyces_sp._AF170204 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN560944 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN227887 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN227895 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JQ782553 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JQ782551 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN560942 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN560952 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._AY429673 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN227900 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN205762 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN205781 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN205790 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN205761 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN560953 AAA-CAACTTTTGACAATGGATCT Orpinomyces_sp._JN887643 AAA-CAACTTTTGACAATGGATCT Pecoramyces_ruminatium_KX961615 AAA-CAAC???????????????? Pecoramyces_ruminatium_KX961613 AAA-CAAC???????????????? Pecoramyces_ruminatium_KX961614 AAAACAAC???????????????? Pecoramyces_sp._JQ934898 AAA-CAACTTTTGACAATGGATCT Pecoramyces_sp._JQ934900 AAA-CAACTTTTGACAATGGATCT Feramyces_sp._GQ600856 AAA-CAACTTTTGACAATGGATCT Feramyces_sp._GQ600920 AAA-CAACTTTTGACAATGGATCT Feramyces_sp._GQ796786 AAA-CAACTTTTGACAATGGATCT Feramyces_sp._GQ638131 AAA-CAACTTTTGACAATGGATCT Feramyces_sp._GQ638316 AAA-CAACTTTTGACAATGGATCT Neocallimastix_frontalis_AY429664 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._GQ850359 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._AY997064 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ782542 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ934903 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ934907 AAA-CAACTTTTGACAATGGATCT Neocallimastix_patriciarum_AF170197 AAA-CAACTTTTGACAATGGATCT Neocallimastix_frontalis_AF170196 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ934908 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ934910 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._JQ782547 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._GQ607815 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._GQ648894 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._AM690052 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._AM690041 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._GQ692728 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._GQ815916 AAA-CAACTTTTGACAATGGATCT Neocallimastix_sp._AM690065 AAA-CAACTTTTGACAATGGATCT OOntomyces_sp._GQ826454 AAA-CAACTTTTGACAATGGATCT OOntomyces_sp._GQ591883 AAA-CAACTTTTGACAATGGATCT OOntomyces_anksri_JX017310 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._GQ857634 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._FJ483846 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._GQ850291 AAA-CAACTTTTGACAATGGATCT Liebetanzomyces_polymorphus_MH468765 AAA-CAACTTTTGACAATGGATCT Liebetanzomyces_polymorphus_MH468766 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560946 AAA-CAACTTTTGACTTTGGATCT Anaeromyces_sp._JN560949 AAA-CAACTTTTGACTTTGGATCT Anaeromyces_sp._JN205771 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560950 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._AY429670 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560943 AAA-CAACTTTTGACAAGGGATCT Anaeromyces_sp._JN887638 AAA-CAACTTTTGACAAGGGATCT Anaeromyces_sp._AY429669 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN887639 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560955 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN227886 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560948 AAA-CAACTTTTGACAATGGATCT Anaeromyces_sp._JN560951 AAA-CAACTTTTGACAATGGATCT NG3_sp._GQ831317 AAA-CAACTTTTGACAATGGATCT NG3_sp._GQ829000 AAA-CAACTTTTGACAATGGATCT Monoblepharella_mexicana_AY997061 AAA-CAACTTTTGACAACGGATCT Monoblepharella_sp._AY997060 AAA-CAACTTTTGACAACGGATCT ; END; BEGIN TREES; Title 'Trees from "pop130.nex.con.tre"'; ID 016b455877a21; LINK Taxa = Taxa; TRANSLATE [0] 1 Cyllamyces_aberensis_JN227893, [1] 2 Cyllamyces_aberensis_AY997042, [2] 3 Cyllamyces_aberensis_AM690060, [3] 4 Cyllamyces_aberensis_JQ934921, [4] 5 Cyllamyces_aberensis_JN227892, [5] 6 Cyllamyces_aberensis_FJ483845, [6] 7 Cyllamyces_sp._JN205759, [7] 8 Cyllamyces_sp._JN205784, [8] 9 Cyllamyces_sp._JQ934919, [9] 10 Cyllamyces_sp._JN205788, [10] 11 Cyllamyces_sp._AM690061, [11] 12 Cyllamyces_sp._FJ501277, [12] 13 Cyllamyces_sp._EU043229, [13] 14 Cyllamyces_sp._AM690047, [14] 15 Cyllamyces_sp._JN205786, [15] 16 Caecomyces_sp._JQ782554, [16] 17 Caecomyces_sp._JQ782555, [17] 18 Caecomyces_sp._JQ934915, [18] 19 Caecomyces_sp._GQ850297, [19] 20 Caecomyces_sp._GQ850340, [20] 21 Caecomyces_sp._JQ934926, [21] 22 Caecomyces_sp._GQ850290, [22] 23 Caecomyces_sp._JN205768, [23] 24 Caecomyces_sp._JN205780, [24] 25 Caecomyces_sp._JQ934924, [25] 26 Caecomyces_sp._GQ630940, [26] 27 Caecomyces_sp._AM690075, [27] 28 Caecomyces_sp._GQ631455, [28] 29 Caecomyces_sp._JQ934933, [29] 30 Caecomyces_sp._JQ934918, [30] 31 Caecomyces_sp._JF974109, [31] 32 Caecomyces_sp._JQ934928, [32] 33 Caecomyces_sp._GQ850302, [33] 34 Caecomyces_sp._JQ934930, [34] 35 Caecomyces_sp._JQ934931, [35] 36 Caecomyces_sp._JQ934917, [36] 37 Unknown_sp._GQ686304, [37] 38 Unknown_sp._GQ686301, [38] 39 Piromyces_sp._GQ850318, [39] 40 Piromyces_sp._JQ934935, [40] 41 Piromyces_sp._JQ934934, [41] 42 Piromyces_sp._GQ850360, [42] 43 Piromyces_sp._JQ934936, [43] 44 Piromyces_sp._JF423623, [44] 45 Piromyces_sp._FJ951427, [45] 46 Piromyces_sp._JN227899, [46] 47 Piromyces_sp._AF170206, [47] 48 Piromyces_sp._JF974106, [48] 49 Piromyces_sp._JN227888, [49] 50 Piromyces_sp._GQ857641, [50] 51 Piromyces_sp._AY429665, [51] 52 Piromyces_sp._AF170207, [52] 53 Piromyces_sp._AF170203, [53] 54 Piromyces_sp._GQ850293, [54] 55 NG13_sp._GQ850296, [55] 56 NG13_sp._JQ934938, [56] 57 Buwchfawromyces_eastonii_EU414758, [57] 58 Buwchfawromyces_eastonii_EU414759, [58] 59 Buwchfawromyces_eastonii_EU414755, [59] 60 Piromyces_sp._JN205774, [60] 61 Piromyces_sp._JN205777, [61] 62 Piromyces_sp._AF170204, [62] 63 Orpinomyces_sp._JN560944, [63] 64 Orpinomyces_sp._JN227887, [64] 65 Orpinomyces_sp._JN227895, [65] 66 Orpinomyces_sp._JQ782553, [66] 67 Orpinomyces_sp._JQ782551, [67] 68 Orpinomyces_sp._JN560942, [68] 69 Orpinomyces_sp._JN560952, [69] 70 Orpinomyces_sp._AY429673, [70] 71 Orpinomyces_sp._JN227900, [71] 72 Orpinomyces_sp._JN205762, [72] 73 Orpinomyces_sp._JN205781, [73] 74 Orpinomyces_sp._JN205790, [74] 75 Orpinomyces_sp._JN205761, [75] 76 Orpinomyces_sp._JN560953, [76] 77 Orpinomyces_sp._JN887643, [77] 78 Pecoramyces_ruminatium_KX961615, [78] 79 Pecoramyces_ruminatium_KX961613, [79] 80 Pecoramyces_ruminatium_KX961614, [80] 81 Pecoramyces_sp._JQ934898, [81] 82 Pecoramyces_sp._JQ934900, [82] 83 Feramyces_sp._GQ600856, [83] 84 Feramyces_sp._GQ600920, [84] 85 Feramyces_sp._GQ796786, [85] 86 Feramyces_sp._GQ638131, [86] 87 Feramyces_sp._GQ638316, [87] 88 Neocallimastix_frontalis_AY429664, [88] 89 Neocallimastix_sp._GQ850359, [89] 90 Neocallimastix_sp._AY997064, [90] 91 Neocallimastix_sp._JQ782542, [91] 92 Neocallimastix_sp._JQ934903, [92] 93 Neocallimastix_sp._JQ934907, [93] 94 Neocallimastix_patriciarum_AF170197, [94] 95 Neocallimastix_frontalis_AF170196, [95] 96 Neocallimastix_sp._JQ934908, [96] 97 Neocallimastix_sp._JQ934910, [97] 98 Neocallimastix_sp._JQ782547, [98] 99 Neocallimastix_sp._GQ607815, [99] 100 Neocallimastix_sp._GQ648894, [100] 101 Neocallimastix_sp._AM690052, [101] 102 Neocallimastix_sp._AM690041, [102] 103 Neocallimastix_sp._GQ692728, [103] 104 Neocallimastix_sp._GQ815916, [104] 105 Neocallimastix_sp._AM690065, [105] 106 OOntomyces_sp._GQ826454, [106] 107 OOntomyces_sp._GQ591883, [107] 108 OOntomyces_anksri_JX017310, [108] 109 Anaeromyces_sp._GQ857634, [109] 110 Anaeromyces_sp._FJ483846, [110] 111 Anaeromyces_sp._GQ850291, [111] 112 Liebetanzomyces_polymorphus_MH468765, [112] 113 Liebetanzomyces_polymorphus_MH468766, [113] 114 Anaeromyces_sp._JN560946, [114] 115 Anaeromyces_sp._JN560949, [115] 116 Anaeromyces_sp._JN205771, [116] 117 Anaeromyces_sp._JN560950, [117] 118 Anaeromyces_sp._AY429670, [118] 119 Anaeromyces_sp._JN560943, [119] 120 Anaeromyces_sp._JN887638, [120] 121 Anaeromyces_sp._AY429669, [121] 122 Anaeromyces_sp._JN887639, [122] 123 Anaeromyces_sp._JN560955, [123] 124 Anaeromyces_sp._JN227886, [124] 125 Anaeromyces_sp._JN560948, [125] 126 Anaeromyces_sp._JN560951, [126] 127 NG3_sp._GQ831317, [127] 128 NG3_sp._GQ829000, [128] 129 Monoblepharella_mexicana_AY997061, [129] 130 Monoblepharella_sp._AY997060; TREE Fig._3 = (129:0.4035281,130:0.4509894,(((((((((((((12:0.007881631,13:0.003398042):0.02767896,14:0.01315659):0.02338641,15:0.04574522):0.1127211,16:0.01012577,17:0.003840179,18:0.01262829):0.05625514,((((1:0.005648799,2:0.00392133):0.008988551,3:0.01321214,4:0.003749866):0.01596231,(5:0.005448886,6:0.003699267):0.01054665):0.08498094,11:0.01371466,(10:0.02001744,(7:0.01279584,8:0.005364114,9:0.003757948):0.01025374):0.01816526):0.06280745,((24:0.007474723,(23:0.01853889,((19:0.03671794,20:0.00717696):0.05464597,(21:0.07533843,22:0.02605641):0.02119012):0.03385283):0.03072706):0.04645758,25:0.0104938):0.07537154,31:0.02092874,32:0.023133,33:0.009072098,(29:0.02258682,30:0.0278582):0.03433464,(28:0.03008898,(26:0.07592582,27:0.006235858):0.01331394):0.1179425):0.03611708,(34:0.03676612,35:0.02217311):0.01994134):0.0182466,36:0.009682225):0.09734179,(37:0.01854339,38:0.3174972):0.1799831):0.03479541,(54:0.003213789,55:0.04524644,56:0.02268318):0.02119667,(60:0.00730754,61:0.02139551):0.1042299,(((49:0.004744673,50:0.006155958):0.01461344,51:0.003457878):0.04358974,(52:0.2245207,53:0.1996626):0.07809195,((45:0.00637244,46:0.004744981):0.2093268,(47:0.165422,48:0.06697722):0.05160294,(((42:0.06023903,43:0.01024177):0.04689769,(39:0.007760462,40:0.003156101,41:0.08030025):0.04972252):0.04152635,44:0.01718892):0.0512264):0.03077282):0.06934615,(59:0.03716092,(57:0.00362293,58:0.003617855):0.03343349):0.1660771,62:0.2848979):0.05797784,(((((((88:0.003059132,89:0.002630767):0.02443933,90:0.004420951):0.006015989,91:0.00295079,92:0.009581671,93:0.05896212):0.01577874,94:0.09202384):0.01255344,95:0.0977618):0.03158199,(96:0.07445857,97:0.002419818,98:0.009241217):0.03847656):0.04952547,(102:0.05279838,(101:0.02584325,(99:0.008985897,100:0.01116728):0.07556698):0.04183247):0.04393473,105:0.1151343,(103:0.02337536,104:0.007132658):0.1699674,(((83:0.0062026,84:0.006753444,85:0.009440093):0.03229838,(86:0.05194782,87:0.005618816):0.0839909):0.1664441,(((((((63:0.003404592,64:0.004823929):0.00685568,65:0.007980808):0.0209171,(66:0.0108644,67:0.06541315):0.02587657):0.07213795,68:0.003336989,69:0.003385245,70:0.006911518,71:0.004712082,72:0.01098107,73:0.03065544):0.04872756,(74:0.01119612,75:0.01865868):0.01700014):0.02719008,(76:0.003318839,77:0.007914175):0.02232775):0.07075099,(81:0.01172066,82:0.02951938,(78:0.005014177,79:0.005430881,80:0.00504095):0.03487116):0.07670703):0.07702116):0.07686173):0.08008359):0.1047951,(108:0.1212003,(106:0.02233023,107:0.008786526):0.3347364):0.08289615,(112:0.00327679,113:0.003086633):0.1663315,((109:0.01665269,110:0.003241849):0.09630539,111:0.04361055):0.07752026):0.07275608,((((114:0.002800787,115:0.002799717):0.01854577,116:0.003915309,117:0.002805359,118:0.002812672):0.01106927,(119:0.002764283,120:0.002777807):0.06219478):0.01437774,121:0.01770641):0.04220835,(122:0.006890613,123:0.002846019,124:0.009268518):0.01619578,(125:0.002755751,126:0.002803338):0.02053984):0.2368699,(127:0.01137039,128:0.03477737):0.3092391):0.7475491); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 424; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 424; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 424; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1560845211371; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1587057884489959389; tell It; setDefaultOrder 4 5 11 12 13 14 8 9 10 7 6 0 1 2 3 27 28 29 17 18 19 20 16 15 21 33 34 32 25 26 22 23 24 30 31 35 49 50 53 54 55 51 52 56 45 46 47 57 41 43 44 42 48 36 37 38 59 60 58 39 40 61 104 105 106 107 108 111 112 113 114 115 118 109 110 116 117 121 122 123 119 120 99 100 101 102 103 81 82 85 84 86 87 83 88 89 90 91 97 98 94 92 95 96 93 124 125 62 65 66 67 63 64 68 69 70 71 72 74 75 73 76 77 78 79 80 126 127 129 128; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2945082199408756465; mqVersion 351; checksumv 0 3 3964941185 null getNumChars 424 numChars 424 getNumTaxa 130 numTaxa 130 short true bits 15 states 15 sumSquaresStatesOnly 926248.0 sumSquares 926248.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 609; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1316 940; setLocation 364 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2945082199408756465 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 408; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 707 868; setLocation 364 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;