NEXUS [File created by TreeBASE: 7/26/07 21:13:14] [Matrix accession#: M2768] BEGIN TAXA; TITLE M2768; DIMENSIONS NTAX=71; TAXLABELS Ziziphus_thyrsiflora Ziziphus_taylori Ziziphus_spinachristi_15 Ziziphus_spinachristi_14 Ziziphus_spinachristi_13 Ziziphus_rugosa Ziziphus_pubescens_12 Ziziphus_pubescens_11 Ziziphus_ornata Ziziphus_oenopolia_Astuti_s.n. Ziziphus_obtusifolia_var._obtusifolia_19 Ziziphus_obtusifolia_var._obtusifolia_14 Ziziphus_obtusifolia_var._canescens Ziziphus_mucronata_20 Ziziphus_mucronata_15 Ziziphus_mistol_30 Ziziphus_mistol_13 Ziziphus_mauritiana_16 Ziziphus_mauritiana_12 Ziziphus_mauritiana_02 Ziziphus_lotus Ziziphus_jujuba_ZhaoJin_s.n. Ziziphus_jujuba_USNA_NA9622 Ziziphus_jujuba_USNA_NA65890 Ziziphus_jujuba_USNA_MA48915 Ziziphus_jujuba_UCBGE57170001 Ziziphus_jujuba_DBG682201016 Ziziphus_horsfieldii Ziziphus_guatemalensis_14 Ziziphus_guatemalensis_12 Ziziphus_glabratagen Ziziphus_glabrata Ziziphus_celata_02 Ziziphus_celata_01 Ziziphus_calophylla Ziziphus_amole Ziziphus_acidojujuba_06 Ziziphus_acidojujuba_05 Ventilago_viminalis Trymalium_ledifolium Trichocephalus_stipularis Spyridium_globulosum Siegfriedia_darwinioides Rhamnus_lycioides Rhamnus_glandulosa Reissekia_smilacina Pomaderris_rugosa Phylica_pubescens Phylica_polifolia Phylica_nitida Paliurus_spinachristi Paliurus_ramosissimus_07 Paliurus_ramosissimus_06 Paliurus_hemsleyanus_04 Paliurus_hemsleyanus_03 Noltea_africana Nesiota_elliptica Lasiodiscus_mildbraedii Hovenia_trichocarpa Hovenia_dulcis_USNA24752 Hovenia_dulcis_Goodwin619814 Hovenia_dulcis_Chase968 Doerpfeldia_cubensis Cryptandra_cf._spyridioides Condalia_microphylla Colubrina_reclinata Colubrina_asiatica Ceanothus_coeruleus Bathiorhamnus_cryptophorus Ampelozizyphus_amazonicus Alphitonia_aff._incana ; END; BEGIN CHARACTERS; TITLE M2768; DIMENSIONS NCHAR=527; FORMAT SYMBOLS = " A C G T 4 5 6 7 8 9 B D E F H J K L M N P Q R 0 1 2 " MISSING = ? GAP = - ; CHARSTATELABELS 510 'EF3-8' / _ '4-8' '3-8', 511 EF32 / _ 32, 512 'EF86-92' / _ '86-92', 513 'EF141-145' / _ '141-144' '141-145', 514 'EF171-184' / _ '175-184' '179-184' '171-184' '171-185' '169-236', 515 'EF252-259' / _ 257 '252-259', 516 'EF269-282' / _ '269-274' '269-277' '269-282', 517 'EF316-330' / _ '327-329' '326-329' '325-329' '324-329' '323-329' '320-329' '323-330' '321-330' '325-330', 518 'EF364-367' / _ '364-367', 519 'EF384-388' / _ '384-387' '384-388', 520 EF391 / _ 391, 521 'EF399-403' / _ '399-403', 522 'EF439-444' / _ '439-444' 444, 523 'EF487-488' / _ 487 '487-488', 524 EF497 / _ 497, 525 'EF293-297' / _ '293-297', 526 'EF100-138' / _ '100-138' '118-122,134-138' '110-114,134-138' '123,134-138', 527 'EF499-500' / _ '499-500' 499 ; MATRIX Ziziphus_thyrsiflora CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100010 Ziziphus_taylori CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTT-------------------------------------------------------------------TGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTTATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC001052T61110100010 Ziziphus_spinachristi_15 ------------TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGC------------------------------?110T2TT11111??01? Ziziphus_spinachristi_14 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-A--------------0110T2TT111110?01? Ziziphus_spinachristi_13 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Ziziphus_rugosa CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGATCAT??-TTCATATTATC--------------GCTCGTACTGTACTGAAACTTCCAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCCGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATA{AG}ACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG{GT}GAA{GT}GG{CT}CGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T1TT1111100010 Ziziphus_pubescens_12 CAAAAAAGCCCCTTG-GATTACCTAATTATTTATCCTATACGC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGGTTCGC-------ATTCATTCTACTCT???-----??AAATGGATCTGAGCGTA-----AA-----TTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCGTTGAGCAAGTAACTCCGATTGTAAATTGGAATGATTAACAATACATATTATT--------------ACTCGGACTGTACTGAATCTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAAGCCTGGCTGGATAAGACTTTGTAATT----CCC-TTTTCGT-----CTTTTTAATTGACGGAGACCCAAGTCATCTATTAAAATAAAAATCAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0012T0T601110000T0 Ziziphus_pubescens_11 CAAAAAAGCCCCTTG-GATTACCTAATTATTTATCCTATACGC-----TCATTTCGTTAGCGATTCAAAATTCGTTATGGTTCGC-------ATTCATTCTACTCT???-----??AAATGGATCTGAGCGTA-----AA-----TTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCGTTGAGCAAGTAACTCCGATTGTAAATTGGAATGATTAACAATACATATTATT--------------ACTCGGACTGTACTGAATCTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAAGCCTGGCTGGATAAGACTTTGTAATT----CCC-TTTTCGT-----CTTTTTAATTGACGGAGACCCAAGTCATCTATTAAAATAAAAATCAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0012T0T601110000T0 Ziziphus_ornata CAAAAAAGCCCATTT-GATTCCCTAATTGTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AACCTTGT--------------GGTATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTT------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATAGTCGGG-TAGCTCAGCTGGTAGAGC-AGAGGACTG------0110T2T41111100010 Ziziphus_oenopolia_Astuti_s.n. CAAAAAAGCCCATTT-GATTCCCTAATTGTT-ATCCTATACTC-----TCATCTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AACCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------GATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCGTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Ziziphus_obtusifolia_var._obtusifolia_19 CAAAAAGTCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACATGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTC??????-----AAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100110 Ziziphus_obtusifolia_var._obtusifolia_14 --------------------------TTTTTTATCCTATACTC-----TCA{GT}TT{CG}GTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACATGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTC??????-----AAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC?010T2T61110100110 Ziziphus_obtusifolia_var._canescens CAAAAAGTCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACATGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTC??????-----AAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100110 Ziziphus_mucronata_20 CAAAAAG{AG}CCGATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTTGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAAAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTGACAAAGTCTTCTTTTTTTTTTT----GAAGAT-CTAAGAA---ATTCCACCAAGGTCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGG-----------------------------------0110T2T211111??01? Ziziphus_mucronata_15 CAAAAAGACCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTTGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTGACAAAGTCTTCTTTTTTTTTTT----GAAGAT-CTAAGAA---ATTCCACCAAGGTCTGG----ATAAGACTTTGTACTT----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGTGTCGTGAATGGTCGGG-----------------------------------0110T2T211111??01? Ziziphus_mistol_30 CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AACCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100010 Ziziphus_mistol_13 CA{AC}AAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AACCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100010 Ziziphus_mauritiana_16 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG{GT}GAA{GT}GG{CT}CGGGATAGCTCAGCTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Ziziphus_mauritiana_12 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCG{CT}CG{GT}GAA{GT}GG{CT}CGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Ziziphus_mauritiana_02 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Ziziphus_lotus CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGTGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC-----CC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGT-------------------------0110T2T112111??01? Ziziphus_jujuba_ZhaoJin_s.n. CAAAAAGGCCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTT----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGC---------------------------------------------------0110T2T211111??01? Ziziphus_jujuba_USNA_NA9622 CAAAAAGGCCC{AC}TTT-G{AG}TTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAG-------------------------------0110T2T111111??01? Ziziphus_jujuba_USNA_NA65890 CAAAAAGGCCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGA----------------------------------0110T2T111111??01? Ziziphus_jujuba_USNA_MA48915 CAAAAAGGCCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------??---------------------------------------------------------------0110T2T11111???01? Ziziphus_jujuba_UCBGE57170001 CAAAAAGGCCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTT----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAG-------------------------------0110T2T211111??01? Ziziphus_jujuba_DBG682201016 ------------------TTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCG{CT}CGGGAAGGG{CT}CGGGA{AT}A{CG}C{CT}CA{CG}C{GT}GG----------------------?110T2T1111110?01? Ziziphus_horsfieldii CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCCATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAG-------------------------------0110T2TT11111??01? Ziziphus_guatemalensis_14 CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100010 Ziziphus_guatemalensis_12 CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-A{AG}AGGACTGAAAATC0010T2T61110100010 Ziziphus_glabratagen CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGT---------------------0110T2TT111110?01? Ziziphus_glabrata CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAG-CTAAGAA---ATACCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG{GT}GAA{GT}GG{CT}CGGGATAGCTCA---------------------------0110T2TT11111??01? Ziziphus_celata_02 CAAAAAGTCCTATTG-GATTCCCTAATTATTTATCCTATGCTC-----TCAGTTCGTTAACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTCTACTCTTGTACTTTACA-----?TCTGAGCGGA-----AATTTTTTTCTTTTCACA------AGCCTTGTGATATTGT------GATGTATAGGATACACGTACAAATGAACATCGTTGGGCACGTAACCCCGATTGTAAATTGTAATGATTAACAATACATATTATT--------------ACTTGTACTGTACTGAAACTTACAAAGTCTTATTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAGACCTGG----ATAAGGCTTTGTAATC----CCC-TTTTCGT-----CTTTTTCATTGACATAGAACCAAGTCCTCTATTAA------AATGAGGATGGTGTGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC001020T61111100020 Ziziphus_celata_01 CAAAAAGTCCTATTG-GATTCCCTAATTATTTATCCTATGCTC-----TCAGTTCGTTAACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTCTACTCTTGTACTTTACA-----?TCTGAGCGGA-----AATTTTTTTCTTTTCACA------AGCCTTGTGATATTGT------GATGTATAGGATACACGTACAAATGAACATCGTTGGGCACGTAACCCCGATTGTAAATTGTAATGATTAACAATACATATTATT--------------ACTTGTACTGTACTGAAACTTACAAAGTCTTATTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAGACCTGG----ATAAGGCTTTGTAATC----CCC-TTTTCGT-----CTTTTTCATTGACATAGAACCAAGTCCTCTATTAA------AATGAGGATGGTGTGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC001020T61111100020 Ziziphus_calophylla CAAAAAAGCCCATTT-GATTCCCTAATTGTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AACCTTGT--------------GGTATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTT------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG{GT}GAATAGTCGGGATAGCTCAGCTGGTAGAGC-A{AG}AGGACTGAAAATC0110T2T41111100010 Ziziphus_amole CAAAAAGGCCCATTT-GGTTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTAAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGTTTCGTCTTTTTAATTGACATAGACCCAAGTTATCTATTAA------AATGAGGATGATGCGTCGTGGATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61110100010 Ziziphus_acidojujuba_06 CAAAAAGGCCC{AC}TTT-G{AG}TTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG-GAATGGACGGG-----------------------------------0110T2T111111??01? Ziziphus_acidojujuba_05 CAAAAAGGCCC{AC}TTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGAAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTATTTTTTTTTTTT---GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG-----------------------------------------------0110T2T111111??01? Ventilago_viminalis --------------------------------ATCCTATGCTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTTTACTTTTTTACTTTACAAATGG-TTTGAGCGGA-----AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATAGGATACACGTACAAATAAACATCGTTGAGCACGTAACAACGATT?-AAAATGTAATGATTAACAATACATATTATT---------TTATTACTCGTACTGTACTAAAACTTACAAAGTCTTCTTTTT----------GAAGATTCCAAGAA---ATTCCACCAAGGCCCGG----ATAAGACTTTGTAATCGCCCCCC-TTTTCGT-----CTTTTTAATTGACATAGAACCATGTCCTCTATTAA------AATGAGTCTGGTGCGTCGTGAATGGTCGGGATAGCTCAG-TG-TAGAGC-??---ACTGAA----??10T026101111004? Trymalium_ledifolium CAAAAAGGCCCAGTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTATCGGTTCAAAATTCATTATCTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACATACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTT???????----------AAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAACACTTTGTAATC-----CC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTAATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AG-GGATGAA-----0010T2T81211101010 Trichocephalus_stipularis CA------CCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCCTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTAATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTATTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC-----CTCTTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATTTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAG-AC--------2010T2T61201100012 Spyridium_globulosum CAAAAAGGCCCAGTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTATCGGTTCAAAGTTCATTATGTTTCTC-------ATTCATT---------------------------------------CATTTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACATACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTT???????----------AAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAACACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGA------------------0010T2T8111110?01? Siegfriedia_darwinioides CAAAAAGGCCCAGTT-GATTCCCTAATTTTTTATCGTATACTC-----TCATTTCGTTATGGGTTCAAAATTCATTATCTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACATACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTT???????----------AAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAACACTTTGTAATC-----CC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGCCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAATA--0010T2T81211100010 Rhamnus_lycioides CAAAAAGTCCCATTG-GATTCCCTAATTATTTATCCTATGCTC-----TCATTTCGTTAACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTCTACTCTTTTAGTTTACAAATGGTAATGGTCTGAGCGGAAATTTTTTTATTTTCACA------AGCCTTGTGATATTGT------GATATATAGGATACACGTACAAATGAACATCGTTGGGCACGTAACCCTGATTGTAAATTGTAATGATTAACAATACATATTCTT--------------ACTTGTATTGTACTGAAACGTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAGACCTGG----ATAAGGCTTTGTAATC----CCC-TTTTCGT-----CTTTTTCATTGACATAGAACCAAGTCCTCTATTAA------AATGAGGATGGTGCGTCGTGAATGGTCGGGATAGCTCAGCTGGT---------------------001020T6111110?00? Rhamnus_glandulosa ----------------------------------------------------------AACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTCTACTCTTTTAGTTTACAAATGGTAATGGTCTGAGCGGAAATTTTTTTCTTTTCACATTCACAAGCCTTGT--------------GATATATAGGATACACGTACAAATGAACATCGTTGGGCACGTAACCCTGATTGTAAATTGTAATGATTAACAATACATAGTATT--------------ACTTGTACTGTACTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAGACCCGG----ATAAGGCTTTGTAATC----CCC-TTTTCGT-----CTTTTTCATTGACATAGAACCAAGTCCTCTATTAA------AATGAGGATGGTGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC----------------??10T0T6111110?00? Reissekia_smilacina --AAAAGGCCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAACTCTGTTATGTTTCTC-------ATTCATT---------------------------------------AA????????????CACA------AGCCTTGT---------------ATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACTCCGATTGTA????------ATTGTAAATTGGAATGATC------ATATTATCACTCGTACTGTACTGAAACTCACAAAGTCTTCTTTTTTTT-------GAAGAT-CTAAGAA---ATTCCACCAAGGCCCGG----ATAAGACTTTGTAATC-----CCTTTATCGT-----CTTTGTATTTGACATAGACCCACGTCATATATTTA------AATGAGGCTGATGCGCCGCAAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGCG-ACTGAAA---001?40151201100012 Pomaderris_rugosa --------------------------------ATCGTAAACTC-----TCATTTCGTTATCGGTTCAAAATTCATTATCTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACATACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTT?????????--------AAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAACACTTTGTAATC-----CC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAAT?-TC--------------------------------------??10T2T712111??01? Phylica_pubescens CA------CCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTGATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTTAGCAAGTAACCCCGATTGTAAATTGGAATGGT--------CATATTATC--------------GCTCGTACTGTATTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGACTGGTCGGGATAGCTCAGCTGGTAGAA--AGAG--CTGAACAG-2010T2T61111100011 Phylica_polifolia CA------CCCATAT-GACTCCTTAATTTTTTATCATATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTGATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTTAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTACC--------------GCTCGTACTGTATTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGT---------------------2010T2T6111110?01? Phylica_nitida CA------CCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTGATTTTCACA------AGCCTTGT--------------AATATATATGATACACGTACAAATGAACATCATTTAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------TCTCGTACTGTATTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-TTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAG-ACTGA-----2010T2T61111100012 Paliurus_spinachristi CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCTGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Paliurus_ramosissimus_07 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAACAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATCATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCG--------------------------------------------------0110T2TT11111??01? Paliurus_ramosissimus_06 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAACAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATCATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTACTC----CCC-TTTTCG{CT}-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCG{CT}CG{GT}GAA{GT}GG{CT}CGG{AG}ATA{CG}CTCA{CG}C{GT}GGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Paliurus_hemsleyanus_04 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGT----ATATGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-A{AG}AGGACTGAAAATC0110T2TT1111100010 Paliurus_hemsleyanus_03 ----------------GATTCC-TAATTTTT-ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTTTT-----GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGT----ATATGACTTTGTACTC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAG-------------------------------?110T2TT11111??01? Noltea_africana CA------CCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------?---------------------------------------------AATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGNACAAATGAACATCATTGAGCACGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTATTGAAACTTACAAAGTATTTT--------------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATAGACATAGAACCAAGTCATCTATTCA------AATGAGGATGATGCGTCGAGAA-------------------------------------------20?0T2T?11111??01? Nesiota_elliptica CAC-----CCATTTG-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------CATTTTTTTATTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTATTGAAACTTACAAAGTCTTCGTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGT---------------------1010T2T6111110?01? Lasiodiscus_mildbraedii CAAAAAGGCCCATTT-GATTCCCTAGTATTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCAAT---------------------------------------AATTTGTTTCTTTTCACA------AGCCTTGT---------------?TATATATGATACACGTACAAATGAACATCATCGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAAGAAATTCCGCCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTG--AAGGC-AGAGGACTGAA--??0010?2T61111120010 Hovenia_trichocarpa CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGAGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTT-------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAACC----CCC-TTTTCGT-----CTTTTTAATTGACATA{AG}ACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCG{GT}GAATGG{CT}CGGGATAGCTCA{CG}CTGGTA{AG}AGC-A{AG}AGGACTGAAAATC0110T2T51111100010 Hovenia_dulcis_USNA24752 CAAAAAGGCCCTTTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGAGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTT-------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAACC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGCCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-A{AG}AGGACTGAAAATC0110T2T51111100010 Hovenia_dulcis_Goodwin619814 CAAAAAGGCCCATTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGAGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTT-------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAACC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0110T2T51111100010 Hovenia_dulcis_Chase968 CAAAAAGGCCCTTTT-GATTCCCTAATTTTT-ATCCTATACTC-----TCATTTCGTTAGAGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTTTTT-------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAACC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGCCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTG-TAGAGG-AGAG-ACTGA-----0110T2T51111110012 Doerpfeldia_cubensis CAAAAAGGCCCATTG-TATTCCCTAATTATTTATCCTATACTC-----TCATTTTGTTAGCGGTTCAAAATTCGTTATGGTTCGC-------ATTCATTCTACTCT???-----??AAATGTATCTAATCGTA-----AA-----TTCTTTTCACA------AGCCTTTTTTTT----------GATATATATGATACACGTACAAATGAACATCGTTGACCA-----CTCC-ATTGGAA-------TGATTAACAATACATATTATTACTACATAATTATTACTCGGGCTGTGCTGAATCTTAAAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAAGCCTGACTGGATAAGACTTTGTAATT----CCC-TTTTTGT-----ATTTTTAATTGACGAAGACCCAAGCCATCTATGAAAATTACAATCAGGATGATGCGCCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAG-AC--------0012100601110000T2 Cryptandra_cf._spyridioides CAAAAAGGCCCAGTT-GATTCCCTAATTTTTTATCCCATACCC-----TCGTTTCGTTATCGGTTCAAAATTCATTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACATACAAATGAACATCGTTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCCCGTACTGTACTGAAACTTACAAAGTCTT???????????------AAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAACACTTTGTAACC----CCC-TTTTCGT-----CTTTTTAATTGACAGAGACCCAAGTCATCTATTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AG-GGACTGAA----0010T2T91111101010 Condalia_microphylla CAAAAAGTCCCTATTGGATTCCCTAATTCTTTATCCTATGCTC-----TCAGTTCGTCAACGGTTCAAAATTCGTTATGTTTCTC-------ATTCATTCTACTCTTTTACTTTACAAATGG-TCTGAGCGGA-----AATTTGTTTCTTTTCACA------AGCCTTGTGATATTGTGATAT?GATATATAGGATACACGTACAAATGAACATCGTTGGGCACGTAACCCCGATTGTAAATTGTAATGATTAACAATACATATTATT--------------ACTTGTACTGTACTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAGACCCGG----ATAAGGTTTTGTAATC----CCC-TTTTCGT-----CTTTTTCATTGACATAGAACCAAGTCCTCTATTAATATTAAAATGAGGATGGTGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGG-AGAGGACTGAA--??001000T61111000040 Colubrina_reclinata CAAAAAGGCCCATTT-GATTCCCTAATTTTTTATCCTATACTCGCATTTCATTTCGTTAGCGGTTCAAAATCCGTTATGTTTCTCGTTTCTCATTCATT---------------------------------------AATTTTTTTCTTTTTACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATTATTGAGCAAGTAACCCCGATTTTATATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTGCAAAATCTTCTTTTT----------GACGAT-CTAAGAA---ATTCCACCACGGCCTGG----CTAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAAAATAA-AATGAGGATGATGCAGCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGA-----0010T2T61111200010 Colubrina_asiatica --------------------------------ATACTCTCATT-----TCATTTCGTTAGCGGGTCAAAATTCGTTATGTTTCTCGTTTCTCATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCCTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTATATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTGCAAAATCTTCTTTTT----------GAAGAT-CTAAGAA---ATTTTAACAAGGTCTGG----CTAAGACTTTGTAATC----CCC-TTTTCGC-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGATGATGCAGCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGG-AGAG-A-TGAA----??10T2T61111100012 Ceanothus_coeruleus CAAAAAGGCCCATTT-GATTCCCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCTC-------ATTCATT---------------------------------------AATTTTTTTCTTTTCACA------AGCGTTGT--------------GATATATATGATACACGTACAAATGAACATCATTGAGCAAGTAACCCCGATTGTAAATTGGAATGAT--------CATATTATC--------------GCTCGTACTGTACTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACATAGACCCAAGTCATCTATTAA------AATGAGGGTGATGCGTCGTGAATGGTCGGGATAGCTCAGCTG-T---------------------0010T2T6111111?01? Bathiorhamnus_cryptophorus ----------------------------????ATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGGTTCGC-------ATTCATTCTACTCT???-----??AAATGGATCTGAGCGTA-----AA-----TTCTTTTCACA------AGCCTTTT--------------GATATATACGATACACGTACAAATGAACATCGTTGAGCAAGTAATTCCGATTGTAAATTGGAATGATTAACAATACATATTATT--------------ACTCGGACTGTACTAAATCTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAAGCCCGGCCGGATAAGACTTTAAATTC-----CC-TTTTCAT-----CTTTTTAATTGACGGAGACCCAAGTCATCTATGAAAATTAAAATCAGGATAATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGCGAGAGGACTGAA--????12T0T602110000T0 Ampelozizyphus_amazonicus CAAAAAGGCCCATTG-GATTCCCTAATTATTTATCCTATACTC-----TCATTTTGTTAGCGGTTCAAAATTCGTTATGGTTCGC-------ATTCATTCTACTCT???-----??AAATGAATCTAATCGTA-----AA-----TTCTTTTCACA------AGCCTTTT--------------GATATATATGATACACGTACAAATGAACATCGTTGAGCAAATAACTCCGATTGTAAATTGGAATGATTAACAATACATATTATT--------------ACTCGGACTGTACTGAATCTTACAAAGTCTTCTTTTT----------GAAGAT-CCAAGAA---ATTCCACCAAAGCCTGACTGGATAAGACTTTGTAATT----CCC-TTTTTGT-----CTTTTTAATTGACGAAGACCCAAGTCATCTATTAAAATTACAATCAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTG-TAGAGC-AGAG-ACTGA-----0012T0T601110100T2 Alphitonia_aff._incana CAAAAAGGCCCATTT-GATTACCTAATTTTTTATCCTATACTC-----TCATTTCGTTAGCGGTTCAAAATTCGTTATGTTTCGC-------ATTCATT---------------------------------------AATCTTTTTCTTTTCACA------AGCCTTGT--------------GGTATATATGATACACGTACAAATGAACATCGTTGAGCAAGTAACCCCGATTGTAAATTGGAATAAT--------CATATTATT--------------GCTC??-----ACTGAAACTTACAAAGTCTTCTTTTT----------GAAGAT-CTAAGAA---ATTCCACCAAGGCCTGG----ATAAGACTTTGTAATC----CCC-TTTTCGT-----CTTTTTAATTGACAGAG-CCCAAGTCATCTGTTAA------AATGAGGATGATGCGTCGTGAATGGTCGGGATAGCTCAGCTGGTAGAGC-AGAGGACTGAAAATC0010T2T61111100?10 ; END; BEGIN ASSUMPTIONS; USERTYPE EF gap 100-138 STEPMATRIX = 26 A C G T 4 5 6 7 8 9 B D E F H J K L M N P Q R 0 1 2 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1 2 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 . ; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; TYPESET * UNTITLED = unord: 1 - 525 527 , EF gap 100-138: 526 ; END;