NEXUS [File created by TreeBASE: 1/16/09 15:23:14] [Matrix accession#: M2767] BEGIN TAXA; TITLE M2767; DIMENSIONS NTAX=66; TAXLABELS Ziziphus_thyrsiflora Ziziphus_taylori Ziziphus_spinachristi_15 Ziziphus_spinachristi_14 Ziziphus_spinachristi_13 Ceanothus_coeruleus Berchemia_discolor Alphitonia_aff._incana Ziziphus_rugosa Ziziphus_pubescens_12 Ziziphus_pubescens_11 Ziziphus_oenopolia_Bernardi_16046 Ziziphus_oenopolia_Astuti_s.n. Ziziphus_obtusifolia_var._obtusifolia_19 Ziziphus_obtusifolia_var._obtusifolia_14 Ziziphus_obtusifolia_var._canescens Ziziphus_obtusifolia_Siplivinskyetal.2643 Ziziphus_mucronata_20 Ziziphus_mucronata_15 Ziziphus_mistol_30 Ziziphus_mistol_13 Ziziphus_mauritiana_12 Ziziphus_mauritiana_02 Ziziphus_lotus Ziziphus_jujuba_ZhaoJin_s.n. Ziziphus_jujuba_USNA_NA9622 Ziziphus_jujuba_USNA_NA65890 Ziziphus_jujuba_USNA_MA48915 Ziziphus_jujuba_UCBGE57170001 Ziziphus_jujuba_DBG682201016 Ziziphus_horsfieldii Ziziphus_guatemalensis_14 Ziziphus_guatemalensis_12 Ziziphus_glabrata Ziziphus_celata_02 Ziziphus_celata_01 Ziziphus_calophylla Ziziphus_amole Ziziphus_acidojujuba06 Ziziphus_acidojujuba05 Ventilago_maderaspatana Trymalium_ledifolium Trichocephalus_stipularis Spyridium_globulosum Siegfriedia_darwinioides Rhamnus_lycioides Rhamnus_glandulosa Reissekia_smilacina Pomaderris_rugosa Phylica_pubescens Phylica_polifolia Phylica_nitida Paliurus_spinachristi Paliurus_ramosissimus_07 Paliurus_ramosissimus_06 Paliurus_hemsleyanus_04 Paliurus_hemsleyanus_03 Noltea_africana Nesiota_elliptica Lasiodiscus_mildbraedii Hovenia_trichocarpa Hovenia_dulcis Cryptandra_amara Condalia_microphylla Colubrina_reclinata Colubrina_asiatica ; END; BEGIN CHARACTERS; TITLE M2767; DIMENSIONS NCHAR=806; FORMAT SYMBOLS = " A C G T 4 5 6 7 8 9 B D E F H J K L M N P Q R 0 1 2 " MISSING = ? GAP = - ; CHARSTATELABELS 778 'ITS16-18' / _ 18 '17-18' '16-18', 779 'ITS20-21' / _ 21 '20-21', 780 ITS27 / _ 27, 781 ITS43 / _ 43, 782 ITS51 / _ 51, 783 ITS137 / _ 137, 784 'ITS162-166' / _ '165-166' '162-166', 785 'ITS177-179' / _ '177-179' '178-179' 179, 786 'ITS185-187' / _ '185-187', 787 'ITS190-191' / _ '190-191' 191, 788 ITS213 / _ 213, 789 ITS243 / _ 243, 790 'ITS248-250' / _ '248-250' '249-250', 791 'ITS286-288' / _ '286-288' '287-288' 288, 792 ITS292 / _ 292, 793 'ITS487-488' / _ '487-488', 794 'ITS576-577' / _ '576-577', 795 ITS599 / _ 599, 796 'ITS604-605' / _ '604-605', 797 'ITS640-641' / _ '640-641' 640, 798 'ITS655-656' / _ '655-656' 656, 799 ITS658 / _ 658, 800 'ITS679-681' / _ '679-681' '680-681' 681, 801 'ITS720-723' / _ '720-723', 802 ITS728 / _ 728, 803 'ITS736-737' / _ '736-737' 736, 804 ITS750 / _ 750, 805 'ITS127-129' / _ '127-129' '128-129' 129, 806 'ITS759-761' / _ '759-760' 760 '760-761' 761 ; MATRIX Ziziphus_thyrsiflora AAGGATCATTGTCGAAA-CC-TGCCA-AG-CAG-A-ACCACCCGTGGACATGTTTGAAA--CGCACC----------GGAGGGCTCGGGGCCCAGG----CCCCGGG---CTCTCTCGGACGGGGGG--CCGCATC-CCG{CT}GCCTCGCCCGCCGATGCGCGGGT--GCAGCCTTCCC--GGCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGGACCA-GCTCT--C-CCCCGCCGCCCCAG{AT}GAT--GGCGTGCGGCCGGGGGTGC-GCGTCGTATTCTGTATAT-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------TCCCCGGCACCGGGAGGCGGGGGG-------G---CGGATGCTGGCCTCCCGCGAGCCAC--GGCCCGCGGTTGGTCGAAATG-CGAG--TCCTCGGCGACGAGCGCCGCAGCAACCGGTGGTT--TCCCAACCCTCG??--CCCTGCTGTGCGCGCGAACGGAC-GCCGCGG--CCC{GT}ACCGA--CCCCGATGCGGCGCCAGC----GCGCCGCCTCCG--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA11100112020120111111?0T201020 Ziziphus_taylori AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACACGTGTAAAA--CGCACC----------GGAGGGCTCGGGGCCCAGG----CCCCGGG--CTCTCTTTGGACGGGGGG--CTGCA-?ACCGTGCCTCGCCCGACGATGCGCGGGC--GCAGCCTTCCC--GGCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGAACCA-GCACT--C-CCCTGCCGCCCCAGAGAT--GGTGCGCGGTCGGGG-TGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------CCCCCGACACCGGGAGGCGGGGGGGG---------CGGATGCTGGCCTCCCGCGAGCCAC--GGTTCGCGGCTGGTCGAAATG-CGAG--TCCTCGGCGACGAGCGCCGCAACAATCGGTGGTT--TCCCAACCCTCG??--CCCTGTTGCGCGCGCCAACGGAC-GCCGCGG--CCCGACC--GACCCCAATGCGGCGCCAGC----GCGCCGCCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110001202012T111111?0T201020 Ziziphus_spinachristi_15 AAGGATCATTTTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGCCTCGGGGCCCTGTG---CCTCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGCACGGTT--GCAGCCTTCTC--GGCAGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAAA?AT--GGTGTGCGGTCGGGG-TGC-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAAAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------CCTCCGCCTCGGAAGGGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCCTACAAAGACCCCAACGCGCCGCGGAT----GCGGCGTCTCCA--ACGCGACCCCAG-TCAGGCGGG--TA--------------1110011202112T11111220T2011TT Ziziphus_spinachristi_14 ----ATCATTTTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGCCTCGGGGCCCTGATG--CCTCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGCACGGTT--GCAGCCTTCTC--GGC?GCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCA?AGAT--GGTGTGCGGTCGGGG-TGC-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAA?AACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------CCTCCGCCTCGGAAGGGAA?AGGGGGCGG---------ATGCTGGCCTCCCGTGTGCCAC--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCCTACAAAGACCCCAACGCGCCGCGGAT----GCGGCGTCTCCA--ACGCGACCCCAG-TCAGGCGGG--TA--------------1110011202112T11111220T2011TT Ziziphus_spinachristi_13 AAGGATCATTTTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGCCTCGGGGCCCTGTG---CCTCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGCACGGTT--GCAGCCTTCTC--GGC?GCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGC-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------CCTCCGCCTCGGAAGGGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCCTACAAAGACCCCAACGCGCCGCGGAT----GCGGCGTCTCCA--ACGCGACCCCAG-TC-------------------------1110011202112T11111220T2011T? Ceanothus_coeruleus AAGGATCATTGTCGAAA-CC-TGCCT-AG-CAG-A-ACGACCCGTGAACCTGTAAAAA---??????----------GGGGGGCTCGGGGCCTTTAGG--CCTCGGA--CTCTCTT-GGTCGGTGGG--CTGTATC-CTGTGCCTTGCTTGTCGAAGCA?????--GCTGC??????--GGCCGCACAAA-C----GAA-CCCCGGCGCAAAACCGCGCCAAGGATCATCT--AACGAATTG-GCACT--G-CCCTGTCGCCCCAGAGAT--GGTGTGCGGTTGGG--TGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCC------------CAACTTC-------GAAGGT----GAGAGGG-------CGGATGCTGGCCTCCCGTGT????---GTTTTGCGGTTGGCCGAAATG-CGAG--TCCTCGGCGACGAATGCCGCAACAATCGGTGGTT-CTCC-AACCCTCGGTGTCCCTGTTGTGTGCATGGATTGCC-GTTGTGG--CACGATA--GACCCCAATGCGCTGCAAAT----GCAGCGCTTCCA--ACGCGACCACAG-TCAGGCGGGG-TACC------------111001??02012211211200T201124 Berchemia_discolor --GGATCATTGTTGAAA-CCCTGCAC-AG-CAG-A-ACGACCCGTGAACCTGTAAAA----????????---------GGGGGCGAGGGGCCAA-------CCCGGACCCCCTG---GGCGGGGGGTG-CCAGCACGGGCGTCGGTGGCCGGCGCC-CG?????--GTTGC???????--GCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAAC-TCG--AACAGATCG-GCAT---?-CCCCGTCGGCCCAGAGAT--GGTGCGCGCTCGGGG-TGTTGCATCGTATTATGT---GTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCTCCCCCAAC-------CCAAGCCTCGGCTCCGAGGAGGGCGGGGGG---------CGGATGCTGGCCTCCCGTGCGCCAT--GGCTCGCGGTTGGTCCAAATG-CGAG--TGCTCGGCGACGGGCGCCGCGGCAATCGGTGGTT-GTTC-AACCCTCGGT-GCCACGCCGCGCGCGCGAGTCGC??ACCGGTG--CTCGGCGA-CCCCCTAATGCGCC----------------------------------------------------------------101000??02111T011112200????T? Alphitonia_aff._incana AAGGATCATTGTCGAAA-CC-TGCCT-AG-CAG-A-GCGACCCGCGAACCCGTAAAAA---??????----------GGGGGGCTCGGGGCCTTAGG---CCCTAGG--CTCTCTT-GGTCGGGGGG--TTGCACC-TTGTGCCTTGCTTGTCGACGCA?????--GCTGC??????--GGCCGCAAAAAA-T---GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACATCT--AACGAATTG-GCACT--G-CCCCACCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAACCT-----------TCGACTTCGAAGG-CGAGGGGGGG---------CGGATGATGGCCTCCCGTGTGCCAC--GGTTTGCGGCTGGCCGAAATA-CGAG--TCCTCGGCGACGAGTGCCGCAGCAATCGGTGGTT-CTCC-AACCCTCGGT-GCCCTGCTGCGTGCACGGACTGCC-GTTGTG---ACCCGATAAGACCCCAATGCGCCGCAAAT----GCG?-GTCTCCA--ACGCGACCCCAG-TCAGGCGGG-CCACCCG----------111001??02112T11111220T211122 Ziziphus_rugosa AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAACAAA--CACACC----------GGGGGGCTCGGGGCCTTCACATGCCCCGGA-CCCCTCCTCGGTCGGGGGG--TAGCATC-CCGTGCCTCGCCCGTCGATGCACGGTT--GCTGCTTTCTC--GACCGCACTAA-C???-----CCCCGGCGCGAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATTCAC-CCCCC{GT}C-CCCCAGAGAT--GGTGTGCGGTTGGGG-TGT-GCGTCGTATTCCGTATTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA------------ACCTCGACCTAGGAGGGGAAGGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAACA-TGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCCAGA-CCTCGGC-TCCCTGCTGCGTGCGTGGATCGCC-GTCGCGG--CCCTTTGAAGACCCCAATGCGCTGCCGGT----GCGGCGTCTACA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202110T11111220T201020 Ziziphus_pubescens_12 --------TTGTCGATG-CC-TGCAC-AG-CAG-A-ACGACCCGCGAACTCGTGAAAA?????????--GGGAGGAGGGGGGGCGAGGGGCCT-------CTCGGA--CCCGGACCCCC----------CCACCGC-CCGGGCCGTGCGCGCGGCCGTGC?-CC--GC-?CGTTCC---GGCCGCACCAA-C----GAA-CCCCGGCGCGGG-CTGCGCCAAGGAAC-TCA--AACGGATCA-GCGCG-?--CCCCCGCGCCCCGGAGAC--GGCGAGCGGGCGGGGACGTCGCGTCGTGTTATGTAC-------GTTAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATCAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCC-----------------ACCCCCACCCCGGGGGAGGGGG-------------CGGATGCTGGCCTCCCGCGGGCCTCTAGGCGCGCGGATGGCCCAAAACGCGAG--CCCCCGGCGATGGCCGCCGCGGCAATCGGTGGTTTGTCCGAACCCTCGGC-GCCCCGCCGCGCGCGCGCCCCTC--GCCCACG--CGGCCCGAAGACCCCGACGCGCGGCGCCCTGCCGCCGCGCTCACG--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA111001?10211?00100102020010?0 Ziziphus_pubescens_11 -----------------------------------------------------------------------------------------------------------------------------------------------------------TGCGC?-----GC-?CGTTTC---GGCCGCACCAA-C----GAA-CCCCGGCGCGAG-CTGCGCCAAGGAAC-TCG--AACGGATCA-GCGCG-?--CCCCCGCGCCCCGGAGAC--GGCGGGCGGGCGGGGACGTCGCGTCGCGTCACGTAC-------GTTAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATCAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCC----------------ACCCCCGCCCCGGGGGGAGGGGG-------------CGGATGCTGGCCTCCCGCGGGCCTCGAGGCGCGCGGATGGCCCAAAATGCGAG--CCCCCGGCGACGGCCGCCGCGGCGATCGGTGGTTTGTCCGAACCCTCGGC-GCCCCGCCGCGCGCGGCCCCCGCC-CACGCGG--CCCGAC---GACCCCAACGCGCGGCGCCCTGCCGCCGCGCTCACG--ACGCGACCCCAG-T--------------------------??????210211?001001020T0011?? Ziziphus_oenopolia_Bernardi_16046 ----ATCATTGTCGAAA-CC-TGCCC-TG-CAG-A-ACAACCGGCGAACACGTGAAAAA--CACATC---------GGGGGCCCCCGGGGCCTCGAG---CCTCGGA-CCCCTTTTCGGTCGGGGGG--TTGTATC-CCGTGCCTTGCCTGTCGATGCACGGTT--GCAGCCTTCCCC-GGCCGCACAAA-C----GAAACCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ATCCCCCGCCCCAGAGAT--GGTGTGCGGTCGG---TGT-GCTTCGTATTCTGTATTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1110011T02112111???????????2? Ziziphus_oenopolia_Astuti_s.n. AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCAGTAACAAA--CACACC----------GGGGGCCTCGGGGCCTTCGCG--CCCCGTG-CCCCTATTCGGTCGGGGGG--TCGCATC-CCGTGCCTCGCCCGTCGATGCGCGGCT--GCGGCTCCCTC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCC--AACGAATTG-GCGTT--C-ACCCCTCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGC-GCGTCGCATTCTGTATTTTGTATGTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACACAACGTTGCCCCCCACCCCC--------GCCGTCGACCACGGAGGGGAAGGGGGGG--------CGGATGCTGGCCTCCCGTGCACCGC--GGTCCGCGGCTGGCCGAAACA-CGGG--TCCCCGGCGACGAGCGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGTA-TCCCCGCTGCGCGCGCGGATCGCC-GCCGCGG--CCCCACAGAGACCCCAATGCGCCGCACGA----GCGGCGTCTCGA--ACGCCACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T10111220T201020 Ziziphus_obtusifolia_var._obtusifolia_19 AAGGATCATTGTCGAAA-CC-TGCCCCAG-CAG-A-ACCACCCGTGGACCCGTGAAAAACACACACC----------GGAGGGCCCGGG-----------CCCCGGG---CACTCCCGGACGGGGG---CTGCGTC-CCGCGACTCGCCCGCCGATGCGCGGGC--GCAGCTTTCCC--GGCCGCTCGAA-C----GAAACCCCGGCGCAAA-CCGCGCCAAGGAACATCC--AACGAACCA-GCACT--C-CCCGGCCGCCCCAGAGAT--GGCGCGCGGTCGGGG-TGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACG--ACGTTGCCCCCCC-ATC----------CCCGGACACCGGAGGCGGGGGG-------------CGGATGCTGGCCTCCCGCGGACCAC--GGTCCGCGGTTGGCCGAAATG-CGAG--TCCCCGGCGACGAGCGCCGCAACAACCGGTGGTT--TCCGGACCCTC??--GCCCTGTTGCGCGCGCGGACGGCC-GCCGCGG--CCCC-GACAGACCCCGACGCGGTGCGGAC----GCACCGCCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1100011202112T11111110T201010 Ziziphus_obtusifolia_var._obtusifolia_14 AAGGATCATTGTCGAAA-CC-TGCCCCAG-CAG-A-ACCACCCGTGGACCCGTGAAAAACACACACC----------GGAGGGCCCGGG-----------CCCCGGG---TACTCCTGGACGGGGG---CTGCGTC-CCGCGACTCGCCCGCCGATGCGCGGGC--GCAGCTTTCCC--GGCCGCTCGAA-C----GAAACCCCGGCGCAAA-CCGCGCCAAGGAACATCC--AACGAACCA-GCACT--C-CCCGGCCGCCCCAGAGAT--GGCGCGCGGTCGGGG-TGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACG--ACGTTGCCCCCCC-AT-----------CCCCGGACACCGGAGGCGGGGGG------------CGGATGCTGGCCTCCCGCGGACCAC--GGTCCGCGGTTGGCCGAAATG-CGAG--TCCCCGGCGACGAGCGCCGCAACAACCGGTGGTT--TCCGGACCCTC??--GCCCTGTTGCGCGCGCGGACGGCC-GCCGCGG--CCCC-GACAGACCCCGACGCGGTGCGGAC----GCACCGCCTCCA--ACGCGACCCCAGGTCAGG----------------------1100011202112T11111110T20101? Ziziphus_obtusifolia_var._canescens AAGGATCATTGTCGAAA-CC-TGCCCCAG-CAG-A-ACCACCCGTGGACCCGTGAAAAACACACACC----------GGAGGGCCCGGG-----------CCCCGGG---{CT}ACTCCTGGACGGGGG---CTGCGTC-CCGCGACTCGCCCGCCGATGCGCGGGC--GCAGCTTTCCC--GGCCGCTCGAA-C----GAAACCCCGGCGCAAA-CCGCGCCAAGGAACATCC--AACGAACCA-GCACT--C-CCCGGCCGCCCCAGAGAT--GGCGCGCGGTCGGGG-TGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACG--ACGTTGCCCCCCC-AT-----------CCCCGGACACCGGAGGCGGGGGG------------CGGATGCTGGCCTCCCGCGGACCAC--GGTCCGCGGTTGGCCGAAATG-CGAG--TCCCCGGCGACGAGCGCCGCAACAACCGGTGGTT--TCCGGACCCTC??--GCCCTGTTGCGCGCGCGGACGGCC-GCCGCGG--CCCC-GACAGACCCCGACGCGGTGCGGAC----GCACCGCCTCCA--ACGCGACCCCA-----------------------------1100011202112T11111110T201?1? Ziziphus_obtusifolia_Siplivinskyetal.2643 -----------??GAAA-CC-TGCAC-AG-CAG-A-ACGACCCGTGAACTCGTAAAA----???????---------GGGGGGCGAGGGGCCAAA------CCCGAA-CCTCT-TT-GGCCGGGGGG--CGCCAAC-TCGGGTGTCGCTGGCCGATGCC???????GTTGC???????--GCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-ATCA--AACGAATCAACCATT--G-CCCCGGCGCCCCAGGTAT--GGTGTGTGTTCGGGG-TGCTGCGTCGTATTCTGTAT-------GTCAA-AATGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAAC-------------CCCAAACTCGTCTTCGAGGAGGGCGGGGGG---CGGATGCTGGCTTCCCGTGTGCCAC--?-CTCGCGGTTGGCCCAAATG-CGAG--CACTCGGCGACGAACGCCGTGGCAATCGGTGGTT-GTCC-AACCCTCGGT-GCCATGCTGCGCGCGCTAGTCGCC-AATGCGT--GCTCGTT--GACCCCAATGCA------------------------------------------------------------------111001??02102T01111220T????2? Ziziphus_mucronata_20 AAGGATCATTGTCGAAA-CC-TGCCT-AG-CAG-A-ACAACCGGCGAACCCGTGAAAAA--CACATC----------GGGGGCCTCGGGGCCTCGAG---CCCCGGA-TCCCCTTTCGGTCGGGGGG--CCGCATC-CCGCGCCTCGCTCGTCGGTGCGCGGTT--GCAGCCTTCTC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-CGT-GCGTCGTATTCTGTATTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCC-CCA-A--------CCTCGACCTCCGAGGAGAGGAGGGGG---------CGGATGCTGGCCTCCCGCGTGCCAC--GGTCCGCGGCTGGCCGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCC-GTCGCGG--CCCTACAGAGACCCCGATGCGCCGCCGGT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_mucronata_15 AAGGATCATTGTCGAAA-CC-TGCCT-AG-CAG-A-ACAACCGGCGAACCCGTGAAAAA--CACATC----------GGGGGCCTCGGGGCCTCGAG---CCCCGGA-TCCCTCTTCGGTCGGGGGG--CCGCATC-CCGCGCCTCGCTCGTCGGTGCGCGGTT--GCAGCCTTCTC--GGCCGCCCAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-CGT-GCGTCGTATTCTCTATTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCC-AA-----------CCTCGACCTCCGGGGAGAGGAGGGGG---------CGGATGCTGGCCTCCCGCGTGCCAC--GGTCCGCGGCTGGCTGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCC-GGCGCGG--CCCTACAGAGACCCCGATGCGCCGCCGGT----GCGGCGTCTCCA--ACGCGACCCC------------------------------1110011202112T11111220T201?2? Ziziphus_mistol_30 A-GG-T-ATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACATGTGTAAAA--{CT}{GT}CACC----------GGAGGGCCCGGGGCCTAGG----CCCCGGG-CGCTCTCTCGGACGGGGGC--CTACACC-CCGTGCCTCGCCCGCCGATGCGCGGGT--GCGGCCTTCCC--GTCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGGACCA-GCACC--C-CCCAGCCGCCCCAGAGAT--GGTGCGCGGCCGGGG-TGC-GCGTCGTATTCTATAAT------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCGAT------------CCCCGACACCGGGAGGGGGGG-------------CGGATGCTGGCCTCCCGAGAGCCAC--GGCTCGCGGTTGGCCGAAACG-CGAG--TCCTCGGCGACGAGCGCCGCAACGATCGGTGGTT--TCCCAACCCTC??--GCCCCGTTGCGCGCGCGGACGGAC-GCCGCGG--CC-AAGACCGACCCCAATGCGGCGCCAGC----GCGCCGCCTCCA--ACGCGACCCCAG-TCAGGC---------------------1110011202012T11111110T20112? Ziziphus_mistol_13 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACATGTGTAAAA--CGCACC----------GGAGGGCCCGGGGCCTAGG----CCCCGGG-CGCTCTCTCGGACGGGGGC--CTACACC-CCGTGCCTCGCCCGCCGATGCGCGGGT--GCGGCCTTCCC--GTCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGGACCA-GCACC--C-CCCAGCCGCCCCAGAGAT--GGTGCGCGGCCGGGG-TGC-GCGTCGTATTCTATAAT------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCGAT------------CCCCGACACCGGGAGGGGGGG-------------CGGATGCTGGCCTCCCGAGAGCCAC--GGCTCGCGGTTGGCCGAAACG-CGAG--TCCTCGGCGACGAGCGCCGCAACGATCGGTGGTT--TCCCAACCCTC??--GCCCCGTTGCGCGCGCGGACGGAC-GCCGCGG--CC-AAGACCGACCCCAATGCGGCGCCAGC----GCGCCGCCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202012T11111110T201020 Ziziphus_mauritiana_12 --------TTTTCGAA--CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGC{AC}TCGGGGCCCTGTG---CCCCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGCACGGTT--GCAGCCTTCTC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGC-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC----CAA---------CCTCCGCCTCGGAAGGGAAGAGGGGG--------CGGATGCTGGCCTCCCGTGTGCCGC--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCCCACAAAGACCCCAATGCGTCGCGGAT----GCGGCGTCTCCA--ACGC------------------------------------2110011202112T11111220T201?T? Ziziphus_mauritiana_02 --------TTTTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGCATCGGGGCCCTGTG---CCCCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGCACGGTT--GCAGCCTTCTC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TG{CT}-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGA{GT}TCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCC----AA---------CCTCCGCCTCGGAAGGGAAGAGGGGG--------CGGATGCTGGCCTCCCGTGTGCC{AG}C--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCC{CT}ACAAAGACCCCAA{CT}GCG{CT}CGCGGAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGG--TACCC-----------1110011202112T11111220T2010TT Ziziphus_lotus --------------AA--CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACAC---------GGGGGGGCCTCGCGGCCTCGTG---CCCGGTG-CCCCCCTTCGGCCGGAGGG--CCGCATC-CCGCGCC----------??GCGCGGCT--GCGGCTTTCCC--GGCCGTACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATTCAC-CCCCCCCGCCTCCGAGATACGTTGCGCGGTCGGGG-TGC-GCGTCGTATTCTGTATTCTATATGTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--GTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCCC--AA---------CCCCGACCCCGTCGGGGGAAAGGAGGGGG-----CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGTCGAAACG-CGGG--TCCCCTGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-ATCCCTCGGC-TCCCCGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCCAGAGA--CCCCGGTGCGCCGCCCCGT---GCGGCGTCTTCC-?ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA2110011202110T11111220T102020 Ziziphus_jujuba_ZhaoJin_s.n. AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATA-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_jujuba_USNA_NA9622 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_jujuba_USNA_NA65890 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_jujuba_USNA_MA48915 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_jujuba_UCBGE57170001 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATA-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_jujuba_DBG682201016 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAATG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_horsfieldii AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAACAAA--CACACT----------GGGGGCCTCGGGGCCTTTGTG--CCTCGGA-CCCCTCTTCGGTCGGGGGG--CCGCATC-TCGTGCCTCGGTCGTCGATGCGCGGAT--GCTGCCCTCTC--GGCCGCTCAAA-C----GAA-CCCCGGCGCAAA-TCGCGCCAAGGAACACCC--AACGAATTG-GCATT--C-ACCCCCTGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTATACTGTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ACTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCCAACCTC------------GACCTCCGAAGGGGAGGGGG----------CGGATGCTGGCCTCCCGTGCGACAC--GGTCCGCGGCTGGCCGAAACT-CGGG--TCCACGGTGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCTCGCTGCGCGCGCGGATCGCC-GTCGCGG--CCCTACACAGACCCCAATGCGCCGTCCGGT---GCGGTGCCTTCC-?ACGCGACCCCAGGT--------------------------1110011202112T11111220T10202? Ziziphus_guatemalensis_14 ---GATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACACGTGTAAAA--CGCAAC----------GGAGGGCTCGGGGCCAAGG----CCCCGG{GT}---CTCCCTCGGACGGGGGG--CCGCGTC-CCGTGCCTCGCACGCCGATGCGCGGGC--GCGGCCCTCCC--GGCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGAACCA-GCACG--C-CCCTGCCGCCCCAGAGAT--GGTGCGCGGCCGGCG-CGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACG--ACGTTGCCCCCCCGATCCCC------------GGCACCGGGAGGGAGGGGGG----------CGGATGCTGGCCTCCCGCGAGCCAC--GGCCCGCGGCTGGTCGAAATG-CGAG--TCCTCGGCGACGAGCGCCGCAGCAACCGGTGGTT--TCCAAACCCTC??--GCCCTGCTGCGCGCGCGGACGGAC-GCCGCGG--CCCGACCGA--CCCCGACGCGGCGCCAGC----GCGCCGCCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202012T11111110T201020 Ziziphus_guatemalensis_12 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACACGTGTAAAA--CGCAAC----------GGAGGGCTCGGGGCCAAGG----CCCCGGG---CTCCCTCGGACGGGGGG--CCGCGTC-CCGTGCCTCGCACGCCGATGCGCGGGC--GCGGCCCTCCC--GGCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGAACCA-GCACG--C-CCCTGCCGCCCCAGAGAT--GGTGCGCGGCCGGCG-CGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACG--ACGTTGCCCCCCCGATC------------CCCGGCACCGGGAGGGAGGGGGG----------CGGATGCTGGCCTCCCGCGAGCCAC--GGCCCGCGGCTGGTCGAAATG-CGAG--TCCTCGGCGACGAGCGCCGCAGCAACCGGTGGTT--TCCAAACCCTC??--GCCCTGCTGCGCGCGCGGACGGAC-GCCGCGG--CCCGACCGA-CCCCCGACGCGGCGCCAGC----GCGCCGC-?CCA--ACGCGA???-AG-T--------------------------1110011202012T11111110T20112? Ziziphus_glabrata -AGGATCATTTTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTGAAAAA--CACACC----------GGGGGCCTCGGGGCCCTGTG---CCTCGGA-CCCCTCTTCGGTCGGGGGGG-TTGCATC-CCACGCATCGCCCGTCGATGC{AG}CGGTT--GCAGCCTTCTC--GGC{AC}GCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-TGC-GCGTCGTATTCTGTCTTATAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAAC-------------CTCCGCCTCGGAAGGGAAGA{AG}GGGG--------CGGATGCTGGCCTCCCGTGTGCCAC--GGTTCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTC-AAACCCTCGGC-TCCCCGCTGCGTGTGCGGATCGCC-GTCGCGG--CCCTACAAAGACCCCAACGCGCCGCGGAT----GCGGCGTCTCCA--ACGCGACCCCAG-TCAGGCGGG--TA--------------1110011202112T11111220T2011TT Ziziphus_celata_02 AAGGATCATTGTTGAAAACC-TGCAC-AG-CAG-A-ACGACCCGTGAACTCGTAAAA----CACAACC---------GGGGGGCGAGGGGCCAA-------CCCAAA--CCCCCTT-GGCCGGGGGG--TGCCAAC-TCGGGCGTTGCTGGTCGATGCCTGTTGTTGCTGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-ATCA--AACGAATCAAGCATC--G-CCCCGGCGCCCCAGAGAT--GGTGCGCGTTCGGGG-TGCTGCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ACTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAACCCCAAA------CCTCGTCTTTGAGGAGGACGGGGGG---------CTGATGCTGGCTTCCCGTGCGCTAC--GGCTCGCGGTTGGCCCAAATG-CGAG--CACTCGGCGACGAGCGCCGCGGCAATCGGTGGTT-GTCC-AACCCTCGGT-GCCATGCTGCGCGCGCGAGTCGCT-AATGCGTGCTCGTCGA---CCCCCAATGCGCCGTACAT----GCGGCGTTTACA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA0110010202102T01111220T201020 Ziziphus_celata_01 AAGGATCATTGTTGAAAACC-TGCAC-AG-CAG-A-ACGACCCGTGAACTCGTAAAA----CACAACC---------GGGGGGCGAGGGGCCAA-------CCCAAA--CCCCCTT-GGCCGGGGGG--TGCCAAC-TCGGGCGTTGCTGGTCGATGCCTGTTGTTGCTGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-ATCA--AACGAATCAAGCATC--G-CCCCGGCGCCCCAGAGAT--GGTGCGCGTTCGGGG-TGCTGCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ACTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAAA------CCTCGTCTTTGAGGAGGACGGGGGG---------CTGATGCTGGCTTCCCGTGCGCTAC--GGCTCGCGGTTGGCCCAAATG-CGAG--CACTCGGCGACGAGCGCCGCGGCAATCGGTGGTT-GTCC-AACCCTCGGT-GCCATGCTGCGCGCGAGAGTCGCT-AATGCGTGCTCGTCGA---CCCCCAATGCGCCGTACAT----GCGGCGTTTACA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA0110010202102T01111220T201020 Ziziphus_calophylla AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAACAAA--CACACC--------GGGGGGACCCCGGGGCCTTCGCG--CCCCGTG-CCCCCCTTCGGTCGGGGGGG-CCGCATC-CCGTGCCTCGCCTGTCGATGCGCGTTT--GCCGCTCTCTC--GGCCGCTCAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCTGCCCCGGAGAC--GGTGCGCGGTCGGGG-TGT-GCGTCGCATTCTGTATTGTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGA{CGT}TTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACACAAC{CT}TTGCCCCCC--A------------CCCCCGACGTCGACCGACGGAGGGGAAGGGGG---CGGATGCTGGCCTCCCGTGCGCCAC--GGTCCGCGGCTGGCCGAAACG-CGGG--TCCCCGGCGACGAGCGCCGCAGCAATCGGTGGTT-GTCCAAACCCTCGTC-TCCCCGCTGCGCGCGCGGATCGCC-GCCGCGG--CCCCACAGAGACCCCAACGCGCCGCACCA----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGG------------------1110011202112T10111220T2010T? Ziziphus_amole AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACCACCCGTGGACACGTGTAAAA--CGAACC----------GGAGGGCTCGGGGCCCTGG----CCCCGGG-C-TCTCTTTGGACGGGGGG--CTGCATC-CCGTGCCCCGCACGACGATGCGCGGGT--GCAGCCTTCCC--GGCCGCACGAA-C----GAAACCCCGGCGCAAGACCGCGCCAAGGAACATCC--AACGTACCA-GCATT--C-CCGTGCCGCCCCAGAGAT--GGTGCGCGGCCGGGG-TGC-GCGTCGTATTCT-----????--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC------CAA------CCCCCGACACCGGGAGGCGGGGGGGG---------CGGATGCTGGCCTCCCGCGAGCCAC--GGTTCGCGGCTGGTCGAAATG-CGAG--TCCTCGGCGACGAGCGCCGCAACAATCGGTGGTT--TCCCAACCCTC??--GCCCTGTTGCGCGCGCGAACGGAC-GCCGCGG--CCC--GACCGACCCCAACGCGGCGCGAGC----GCGCCGCCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202012T11111110T201020 Ziziphus_acidojujuba06 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAAT{AG}-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAA1110011202112T11111220T201020 Ziziphus_acidojujuba05 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACAACCAGCGAACCCGTGAATAA--CACATC----------GGGGACCCCGGGGCCCTGTGT--CCCGGAG-CCTTCCTT-GGTCGGGGGT--CTGCACC-TCGCGCCTCGCCCGTCGATGCGCGGTT--GCAGCCTTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCT--AACGAATTG-GCATT--C-ACCCCCCGCCCCGGAGAC--GGTGTGCGGTCGGGG-TGT-GCGTCGTATTCTCTATTGTAAT-GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC--ATCCCAA-------CCTCGACCTCGAGGCGAAGAGGGGG---------CGGATGCTGGCCTCCCGTGTGCCAC--GGTCCGCGGCTGGCCGAAAT{AG}-CGGG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-GTCC-AACCCTCGGC-TCCCTGCTGCGTGCGCGGATCGCT-GTCGCGG--CCCTACAGAGACCCCAATGCGCTGCCAAT----GCGGCGTCTCCA--AC--------------------------------------1110011202112T11111220T201?2? Ventilago_maderaspatana ----ATCATTGTCGAAA-CC-TGCAA-AGACAG-A-ACGACCCGTGAACCGGTGAAAA???-??-------------------CCGGGAGACGTGTG--CCCTCGGG-CCTCTCTC---?C-AGAGC--CGTCGGC-CAAGGTCGCGT?-?TTGAA--A?-??---?CGTC???????-GAGGGCAAAAA-CTAACAAAACCCCGGCGCAAG-TCGCGCCAAGGAA-AAC---AAAGAAAGATGCGCT--G-CCCTCGTGC--?GGAAAC--GGTGCGCGG--GGAA-TGC-G-GTCGTCGT-TATCACC-----?TCCA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--TTAGGGCTGAGGGCACGCCTGCCTGGGTGTCACAAA--AAGTCGTCGAACGCCCC-----TCCCCGCCCCTCACGAGGGGGCGCGGCGAGGGACGACGGACGGATATTGGCCTCCCGTGGGCTCA--GTCACGCGGTTGGCCCAAAAGTCAGG-??T?CCGGC-?CGGCGGCCACGACACACGGTGGTT-G--?AAG-????AGC-TCCCCTCGAACACCGTCGTGGGCC-AGCGCCG--TTGACGGG-GAGCCGAATACCCCGACGC-----GCGGCGTCATCGCTAAGCGACCCCAGGTCAGGCGGGACCACCCGCTGAGTTTAA111001??02102T1110?220T200020 Trymalium_ledifolium AAGGATCATTGTCGAA--CCCTGCCT-AG-CAG-A-ACGACCCGTGAACATGTTAAAAAA-??????-----------GGGGGCTTGGGGCCCATAGG--CCTCGGG--CTCTCTT-GGTCGGGGG---CTGCATG-TTATGCGTCGCTTGTCGATGCA?????--GCAGC????????GACTGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACATCC--AATGAATTA-GCACT--G-CCCCATTACCCCAGAGAT--GGTGTGTGGTCGGGG-TGT-GCTCCGTATTCAA-CTAT-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCAAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCC-AAC-------------TTCGATCTCGAATGCGGGGGG------------CGGATGCTGGCCACCCGTGCCTCAC--GGTTTGCGGCTGGCCGAAATG-CAAG--TCTTCGGCGACGAGTGCCGCAGCAATCGGT?-TT-CTAC-AACCCTC???--CCCTGCTGCGTGCACCGTTAGCT-GTTGTGG--ACGGATA--GACCCCAATGCGCCGCACAT----GCGGTGTCTACA--ATGCGACCACAG-TCAGGCGG?-CCACC----GA------201001??02112T111112?0T20111? Trichocephalus_stipularis AAGGATCATTGTCGAAA-CC-TGCTT-AG-CAG-A-ACGACCCGCGAACATGTGAAAA---??????----------GGGGGGCGAGGGGCCTTAGG---TCTCGGA--CTCTCTT-GGTCGGGGGG--TTGCATC-CTGTGCCTCGCTTGCCGATGCA?????--GCTTC??????--GACCACACAAA-C----GAA-CCCCGGCGCCGAAACGCGCCAAGGAA-AATCT-AACGAAGTG-GCACC--G-CCCCTCCGCCCCAGAGAT--GGTGTGCGGTCGGGG-CGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCC------------A--CCCCACTCTGGGCGTGAGGGGGG-----------CAGATGCTGGCCTCCCGTGTGCCAC--GGCATGCGGCTGGTTGAAATA-TGAG--TCCTCGGCGGCGAGTGCCGCAACAATCGGTGGTT-CTCC-AACCCTCGTG-GCCCTGTTGCGTGCATAGACTGCT-GCTGTGG--CTCGACA--GACCCCATTGTGCTGCTAAT----GCAGCGTATCCA--ACGGGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTT--111001??02012T11111220T201020 Spyridium_globulosum AAGGATCATTGTAGAAG-CC-TGCCT-AG-TCG-A-ACGACCCGCGAACTCGTAAAAAAAA?????----------GGGGGGCTTCGGGGCCTTAGG---CCTCGGG--CTTTCCT-GGTCGGGGG---CTGCATG-CTCTGTGTCGCTTGACGATGCA?????--GCTGT???????-GGCTGTAAAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAAC-TTCC-AAAGAATTA-GCACC--G-CCCTGTCACCCCAGAAAT--GGTGTGTGGCCGTGG-TGT-GCGTCGTATTCAA-CTAA-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCAAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCCCA------------ACTTCGATCTCGAAGGTGGTG--A-GGGG-------CGGATGCTGGCCTCCCGTGCCTCAC--GGTTTGCGGCTGGTCAAAATG-CGAG--TCGCCGGCGACGAGTCCCGCAGCAATCGGTGGTT-CTCC-AACCCTCGGT-GCCCTGCTGCGTGCACGAATCGCT-GCTGTGG--ACG-GATA-GACCCCAATGCGCTGCAGAA----GCGGCGTTTACA--ATGCGACCCCAG-TCAGGCGG?-CCACCC-AAGA------111001??02112T11111220T20111? Siegfriedia_darwinioides AAGGATCATTGTCGAA--CCCTGCCT-AG-CAG-A-ACGATCCGCGAACACGTAAAAAA--??????----------GGGGGGCTCGGGGCCTTAGG---CCTTGGG--CTCTCTT-GGCCGAGGG---CTGCATG-CTGTGCGTCGCTCGCCGATGCA?????--GCTGC??????--GGCTGCAAAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACATCA--AACGAATTA-GCACT--G-CCCCGTCACCCCAGAAAT--GGTGTGTGGTCGGGG-TGT-GCGTCGTATTCAA-CTAA-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCAAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCC-A------------ACCTCGATCTCGAAGGCGG------GGGG-------CGGATGCTGGCC???-GTGCCTCAC--GGTTTGCGGTTGGCCGAAATA-CGAG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-CTCC-AACCCTC??--GCCCCGCTGCATGCACAGATCGCC-GCTGTGG--ACGTACA--GACCCCAATGCGTCGCAAAT----GCGGCGTCTACA--ATGCGACCCCAG-TCAGGCGG?-CCACCCG----------201001??02112T111112?0T20111? Rhamnus_lycioides ---?ATCATTGTCGATA-CCCTGCAC-AG-CAG-A-ACGACCCGTGAACTAGTAAATC---??????-----------GGGAGCGAGGGGCCCTAGAG--CCCCGGA--CCTCCTT-GGCCTGGGGGG-CACCATCGCCGAGCGGCGCTGGTCGACGCT???????GTCGC???????--GCCGCACAAA-C----GAA-CCCCGGCGCAAA-ACGCGCCAAGGAAC-TTC--AACGAATCA-GCAT---?-CCCCGGCGGCCCAGAAAT--GGTGCGTGTCCGGGA-CGTTGCGTCGTATTCTTTAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCAAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCAAA--------------CTCGACTTCCAAGAGGAC{CG}GGGGG---------CGGATGCTGG{CG}CTCCCGTGTGCCAC--GGCTCGCGGTTGGCCTAAATA-CGAG--TACTCGGCGACGAGCGCCGCGGCAATCGGTGGTT-GTCC-AACCCTCGGT-ACCATGCTGCGTGCGCGATCCG---GTCACTG--{GT}TACTCGACGAACCCAATGCGTCGTAGCC----ACGACGCTCA--------------------------------------------101000??02111T01111220120??T? Rhamnus_glandulosa --GGATCATTGTCGAAA-CCCTGCAC-AG-CAG-A-ACGACCCGTGAACTAGTAAAA----???????----------GGGGGCGAGGGGCCCCATAG--CCCCAGA--CCTCCTT-GGCTTGGCGGG-CGCCATCACCGGGCGTCGCTGGTCGACGCA???????GTTGC???????--GCCGTACAAA-C----GAA-CCCCGGCGCAAA-ACGCGCCAAGGAAC-TTC--AACGAATCA-GCAT---?-CCCCGGCACCCCAGAAAC--GGTGCGTGTCTGGGG-CGTTGCGTTGTATTCTTTATAT-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCCCCAAAAC-------CTCGACTTCGAGGAGGA---CGGGGGG-------CGGATGCTGGCCTCCTGTGTGCCAC--GGCTCGCGGTTGGCCTAAATA-CGAG--TACTCGGCGACGAGCGCCGCGGCAATCGGTGGTT-GTCC-AACCCTCGGT-GCCATGCTGCGCGCGTGAGACGC??ACTGTTA--CTCGAGG---ACCCCAATGCGTCGTAGCC----ACGATGCTCACA--ACGCGAC---------------------------------101000??0211?T011112200201?T? Reissekia_smilacina ----ATCATTGTCGATA-CC-TGCAC-AG-CA?-?--CGACCCGTGAA??-GTTGACAC-A??????---------GGGAGAG-??----CGTTGGTTAGCCTTCGG-CCTCTCTT-GGTCTGGGGG--CTGCATC-CGTCGCATCGTTCGTCG-----????---CCGGC??????--GGACGCACA{AT}AACTAAA??----??GGCGCA{GT}A-ACGCGCCAAGGAAC-TCTT-AACATGTTC-GCATC-?--CCCGGTCGCCCCAGCAAT--GGAGCGCGCTCGGGG--???GCACTGTGAA-TGTCT-------G--?--AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTA?CGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111011??0011???????????????2? Pomaderris_rugosa ----ATCATTGTCGA---CCCTGCCT-AG-CAG-A-ACGACCCGTGAACCCGTAAAAA---???????----------GGGGGCTTGGGGCCTTAGG---CCTCGGG--CTCTCTT-GGTCGAGGG---CTGCATG-CTGTGCTTCGCTTGCCGATGCA?????--ACTGC??????--GGCTGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGATCATCG--AACGAATTA-GCACT--G-CCCCGTCACCCCAGAGAT--GGTGTGTGGTCGGGG-TGT-GCGTCGTATTCAA-TTAA-----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCAAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCCCAA------------CCTC--AATCTTGA----AGGCGGGGGG-------CGGATGCTGGCTTTCCGTGCCTCAC--GGTTTGCGGTTGGCCGAAATA-CGAG--TCCCCGGCGACGAGTGCCGCAGCAATCGGTGGTT-CTCC-AACCCTCGGT-GCCCCGCTGCGTGCACAGATCGCT-GCTGTGG--ACAGATA--GACCCCAATACGTCGCAGCT----GCGGCGTCTACA--ATGCGACCCCA-----------------------------T01001??02112T11111220T201?1? Phylica_pubescens AAGGATCATTGTCGAAA-C--TGCAC-AG-CAG-A-ACGACC-GCGAACCTGTGAAAA---??????-----------GGGAGCGAGGGGCCTTAGG---TCTTGAA--CTCTCTT-GGTCGGGGGGG-CTGCATC-CCGTGCCTCGCTTGCCGATGCA?????--GTTGC??????--GGCCGCACAAA-C----GAA-CCCCGGCGCCATATCGCGCCAAGGAA-AATCT-AACGAATTG-GCACT--GCCCCCTCCACCCCAGAGAT--GGTGTGCGGTTGGGG-TGT-GCATCGTATTCTATAAT------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ACTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCTCCCAA-------------CCTCAA-----------AGGTCAGGGGGG-----CGGATGCTGGCCTCCCGTGTGCCAC--GGCATGCGGCTGGTTTGAATA-TGAG--TCCTCGGTGACGAGTGCCGCAACAATCGGTGGTT-CTCC-AACCCTCGTG-GCCCTGTTGCGTGCATAGACCGCC-GTTGTGG--CTCGATA--GACCCCACTGCGTTGCTAAT----GCAGCGTATCCA--ACGCGACCCCAG-TCAG-CGGG--TACCC--TGAGTT---101101??02012T11111220T2011TT Phylica_polifolia AAGGATCATTGTCGAAA-C--TGCTC-AG-CAG-A-ACGACC-GCGAACCTGTCAAAA---??????-----------GGGAGCAAGATGCCTTAGG---TCTCGAA--CTCTCTT-GGTCGGGGGGG-CTGCATC-CCGTGCATCGCTTGCCGATGCA?????--GTTGC??????--GGCCGCACAAA-C----GAA-CCCCGGCGCCAAATCGCGCCAAGGAA-AATCT-AACGAATTG-GCATT--G-CCTCTCCGCCCCAGAGAT--GGTGTGCGGTTGGGG-TGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--TTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ATGTTGCCCCCCCAA------------CCTCAAAGGTGA----------GGGGG--------CGGATGCTGGCCTCCCGTGTGCCAC--GTCATGCGGCTGGTTTGAATA-TGAG--TCCTCGGCGACGAGTGCCGCAACAATCGGTGGTT-CTCC-AACCCTCGTG-GCCCTGTTGCGTGCATGGACTGCC-GTTGTGG--CTCGATA--GACCCCACTGCGTTGCTAAT----GCAGCGTATCCA--ACGCGACCCCAG-TCAG-CGG--CTACCC-CTGAGTTA--121101??02012T11111220T2011T1 Phylica_nitida AAGGATCATTGTCGAAA-CC-TGCTC-AG-CAG-A-ACGACCCGTGAACCTGTCAAAA---??????-----------GGGAGCAAGATGCCTTAGG---TCTCGAA--CTCTCTT-GGTCGGGGGGG-CTGCATC-CCGTGCATCGCTTGCCGATGCA?????--GTTGC??????--GGCCGCACAAA-C----GAA-CCCCGGCGCCAAATCGCGCCAAGGAA-AATCT-AATGAATTG-GCATT--G-CCTCTCCGCCCCAGAGAT--GGTGTGCGGTTGGGG-TGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTTGGCCGAGGGCATGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCAAAC------------CTC-------AAAG----GTGAGGGGG-------CGGATGCTGGCCTCCAGTGTGCCAC--GTCATGCGGCTGGTTTGAATA-TGAG--TCCTCGGCAACGAGTGCCGCAACAATCGGTGGTT-TTCT-AACCTTCGTG-GCCCTGTTGCGTGCATAGACCGCC-GTTGTGG--CTCGATA--GACCCCACTGCGTTGCTAAT-----CAGCGTATCCA--ACGCGACCCCAG-TCAGGCGG--CTACCCGCT--------111001??02012T11111220TT011T1 Paliurus_spinachristi AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAAAAA---CCCACC----------GGGGGCCCCGGGGCCTCGG----CCTCGGACCCCTCTCGCGGTCGGGGGG--CCGCATC-CCGCGCCTCGCCCGTCGATGCGCGGCT--GCTGCCTTCCCC-GGCCGC{AC}CAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCG--AACGAATTG-GCATC-?G-CCCCCCCGCCCCAGAGAT--GGTGCGCGGTCGGGG-CGA-GCGCCGCATTCTGTAT-GTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--GCTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCC-AACCCC------------GACCTCGGGGGGGAGGGGG------------CGGACGATGGCCTCCCGTGCGCCAC--GGTGCGCGGCTGGCCGAAACG-CGAG--TCCCCGGCGACGAGCGCCGCAGCGATCGGTGGTT-GTC-AAGCCCTCGTT-TCCTCGCTGCGCGCGCGGATCGCC-GTCGCGG--CCCCGAAGAGACCCCAACGCGCCGCCTTT----GCGGCGTCACCA--ACG-?A----------------------------------1110011T0211TT?1111220T201?2? Paliurus_ramosissimus_07 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAAAAA---CCAACC----------GGGGGCCCCGGGGCCTCGG----CCCCGGA-CCCCTCTCCGGTCGGGGGGGGATGCGCC-CCGCGCCTCGCCCGTCGACGCGCGGTT--GCCGCCCTTCCC-GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCG--AACGAATTG-GCATC-?G-CCCCCCCGCCCCAGAGAT--GGTGTGCGGCCGGGG-CGC-GCGCCGTATTCTGTAT-GTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA-------------CCCCGTCCCGGGAGGGAAGGGGG-----------CGGATGCTGGCCTCCCGCGCGCCAC--GGTCCGCGGCTGGCCGAAACG-CGAG--TCCCCGGCGACGAGCGCCGCAGCGATCGGTGGTT-GTC-AAGCCCTCGTT-CTCCCGCTGCGCGCGCGGATCGCC-GTCGCGG--CCCCACAGAGACCCCGACGCGCCGCCGGT----GCGGCGTCACCA--ACGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAA1110011T0211TT11111220T201000 Paliurus_ramosissimus_06 ------------------CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAAAAA---CCAACC----------GGGGGCCCCGGGGCCTCGG----CCCCGGA-CCCCTCTCCGGTCGGGGGGGGATGCGCC-CCGCGCCTCGCCCGTCGACGCGCGGTT--GCCGCCCTTCCC-GGCCGC{AG}CAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCG--AACGAATTG-GCAT{AC}-?G-CCCCCCCGCCCCAGAGAT--GGTGTGCGGCCGGGG-CGC-GCGCCGTATTCTGTAT-GTAT--GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCA{AG}AATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--AC{GT}TTGCCCCCCCAA-------------CCCCGTCCCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?110011T0211TT11???????????0? Paliurus_hemsleyanus_04 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAGGGGG----------------CGGATGCTGGCCTCCCGTGCGCCAC--GGTGCGCGGCTGGCCGAAACG-CGAG--TCCCCGGCGACGAGCGCCGCAGCGATCGGTGGTT-GTC-AAGCCCTCGTT-TCCCCGCTGCGCGCGCGGATCGCC-GTCGCGG--CACCACAGAGACCCCGACGCGCCG????-----GCGGCGCC----------------------------------------------????????????????111220T?0???? Paliurus_hemsleyanus_03 AAGGATCATTGTCGAAA-CC-TGCCC-AG-CAG-A-ACGACCGGCGAACCCGTAAAAA---CCCACC----------GGGGGCCCCGGGGCCTCGG----CCTCGGA-CCCCTCCGCGGTCGGGGGGG-CCGCATC-CCGCGCCTCGCCCGTCGATGCGCGGCT--GCCGCCTTTCCC-GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACACCG--AACGAATTG-GCATC-?G-CCCCCCCGCCCCA----?----CTC?CCTTCGGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1110011T0211T??????????????T? Noltea_africana AAGCGACATT-TCGAAA-CC-TGCCT-AG-CAG-ACACGACC-GCGAACCTGTAAAAA---??????-----------GGGGGCGAGGGGCCTTAGG---TCTCGGA--CTCTCTT-GGTTGGGGGGG-CTGCATT-TTGTGCCTCGCTTGCCGATGCA?????--GTAGC??????--GGCCACACAAA-C----GAA-CCCCGGCGTAAAATCGCGCCAAGGAA-AATCT-AATGAATTG-GCATT--G-CCCCTTCACCCCAGAAAT--GGTGTGTGGTTGGGG-TGT-GCGTCGTATTCTATATA-------TCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTCGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCTTC------------GACTTTGAA----GGCGAAGGAGG-------------CGGATGCTGGCCTCCCGTGTGCCAC--GGCATGCGGCTGGTCGAAATA-CGAG--TCCTCGGCGACGAGTGCCGCAACAATCGGTGGTT-GTCC-AACCCTCGTG-GCCCTGTTGCGTGCATAGATCGCT-GTTGTGA--CCTGATA--GACCCCATTGCGTTGCTAAT----GCAGCGTATCCA--ATGCGACCCCAG-TCAGGCGGG-CTACC------------111101??02012T11111220T2011T2 Nesiota_elliptica AAGGATCATTGTCGAAA-C--TGCTC-AG-CAG-A-ACGACC-GCGAACCTGTGAAAA---??????----------GGGGGGCGAGGGGCCTTAGG---TCTCGGA--CTCTCTT-GGTCGGGGGGG-CTGCATC-CCGTGCCTCGCTTGCCGATGCA??--???GTTGC??????--GGCCACACAAA-C----GAA-CCCCGGCGCCAAATCGCGCCAAGGAA-AATCT-AACGAAGTG-GCACC--G-CCCTTCCGCCCCAGAAAT--GGGGTGCGGTAAGGG-TGT-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTAATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCT-------------------CGACTCCAACGGTGAGGGGGG----------CAGATGTTGGCCTCCCGTGTGCCAC--GGCATGCGGCTGGTTGAAATA-CGAG--TCCTCGGCGATGAGTGCCGCAACAATCGGTGGTT-ATCC-AACCCTCGTG-GCCCTGTTGCGTGCATAGACCTCT-GCTGTGG--CTCGAT--AGACCCCATTGCGTTGCTAAT----GCAGCGTATCCA--ACGCGACCCCAG-TCAG-CGGG--TACCC--TGAGTT---121101??02012T11111220T2011TT Lasiodiscus_mildbraedii AAGGATCATTGTCGAAA-CC-TGCAC-AG-CAG-A-ACGACCCGTGAACACGTAAGTA---???????----------GGGGGCCCGGGGCCTCAGG---CCCCGGG--CTCTCTTT-?TCGGGG-??-CTGTATCTCGTGTCTTTCCTTGTCAAAGCA?????--GCAGT??????--GGCTTCACAAA-C----AAA-CCCCGGCGCAAA-CTGCGCCAAGGAACATTT--AACGTATTG-GCAAC--G-CCCCGCCACCCCAGAGAT--GGGGTGTGGTTGGGG-TGT-GCTTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTTTGCCTGGGCGTCACACA--ACGTTGCCCCCCTTA------------ACCTTGACCTTGAAGGCCGGGGGGG----------CGGATGGTGGCCTTCCGTGTG???---GGCAAGCGGTTGGCTGAAATG-CGAT--TCTT-GGCGACGAGTGCCGCAACATTCGGTGGTT-CTCC-AACCTT???--GCCCTGTTGCGTGCACCGACCGC??TCTGCGG--CCCGATA--GACCCCACTGCGCCCTCGTT----GTGGCGCCACCA--ACG-?ACCC-AG-TCAGGCGGG--TAC-------------111000??02112T112112?002011?T Hovenia_trichocarpa AAGGATCATTGTCGAAA-CC-TGCATC-G-CAG-A-ACGACCCGCGAACCCGTAAAAA---CATATC----------GGGGGGCCCGGGGCCTCAGG---CCACGGA--CCCCCTTTGGTCGGGGG---CTGCGC--CCGTGACCCGCCTGTCGGTGCACGGGT--GCCGCCCTCTC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-AACCC-AACGAATCG-GCACT--G-CCCCGTCGCCCCGGAGAC--GGTGTGCGATCGGGG-CGT-GCGCCGTGCTATATTTAAT----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAATCTTTGAACGCAAGTTGCGCCCGAAGCC--TTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA-------------CCCCGACCCCGAGGGCTGGGGGGG----------CGGATGCTGGCCTCCCGTGCGCCGC--GGCGTGCGGCCGGCCGAAATG-CGAG--TCCTCGGCGATGGGTGCCGTAACAGTCGGTGGTT-GTCC-AACCCTCGGT-GCCCTGTTGCGCGCACGGATCGCC-GTTGCGG--A{CT}CGACAGA--CCCCAATGCGCCGCCATC----GCGGCGTCTCCA--GCGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAA1100011202112T11111220T201010 Hovenia_dulcis AAGGATCATTGTCGAAA-CC-TGCAC-AG-CAG-A-ACGACCCGTGAACCCGTAAAAA---CACACC----------GGGGGGCCCGGGGCCACAGG---CCCTGTG--CCCTCTTTGGTCGGGGG---CTGCAC--CCGTGACCCGCCTGCCGGTGCGCGGGT--GCCGCTCTCCC--GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-AACCC-AACGAATTG-GCATT--G-CCCCGTCGCCCCAGAGAT--GGCGTGCGGTCGGGG-TGT-GCGTCGTGTTCTGTT-AAT----GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAATCTTTGAACGCAAGTTGCGCCCGAAGCC--TTTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAA-------------CCTCGACCCCGAGGGCGGGTGGG-----------CGGATGCTGGCCTCCCGTGCGCCAC--GGCGTGCGGTCGGCCGAAATG-CGAG--TCCTCGGCGATGAGTGCCGTAACAGTCGGTGGTT-GTCC-AACCCTCGGT-GCCCTGTTGCGCGCACGGATCGCC-GTTGCGG--ATC--GACAGACCCCAATGCGCCGCAACC----GCGGCGTCTCCA--ACGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAA1110011202112T11111220T201010 Cryptandra_amara -----------TCGAA--CCCTGCCT-AG-CAG-A-ACGACCCGCGAACACGTAAAAAA--??????----------GGGGGGCTTGGGGCCTTAGG---CCTCGGGCTCCTCTTT-GGTCGGGGG---CTGCACG-CTATGCGCCGCTTGCCGATGCA???????GCTTG???????-GGCCGCACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAACAACA--AAAGAATTA-GCACC--G-CCCCGTCACCCCAGAGAT--GGTGCGTGGTCGGGG-TGT-GCGCCGTATTCAA-CTAA-----GTCAA-AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------201001??02112T1????????????1? Condalia_microphylla --GGATCATTGTTGAAA-CCCTGCAC-AG-CAG-A-ACGACCCGTGAACTTGTAAAA----???????---------GGGGGGTGAGGGGCCAA-------CCTGAA-CCCCCCTT-GGCTGGGGGG--CGCCAAC-TCAGGTGTCGCTGGCCGATGCC???????GTTGC??????--GGCCACACAAA-C----GAA-CCCCGGCGCAAA-CCGCGCCAAGGAA-ATCA--AACGAATCAAGCATT--G-??????--------------------CTTTCGGGG-TGCTGCGTCGTATTCTGTAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACA--ACGTTGCCCCCCCAACCCCAAACCTCGTCTCC------------GAGGAGGGCGGGGGG---CGGATGCTGGCTTCCCGTGTGCCTT--GTCTCGCGGTTGGCCTAAATG-CGAG--CACTCGGCGACGAACGCCGTGGCAATCGGTGGTT-GTCC-AACCCTCGGT-GCCATGCTGCGCGCGTGAGTCGCT-GATGCGT--GCTCATCGC--CCCCAAT??????---------------------------------------------------------------101001??02102T01111220T????2? Colubrina_reclinata AAGGATCATTGTCGAAA-CC-TGCAC-AG-CAG-A-ACAACCCGCGAACGAGTTTAAAAA-????????--------GGGGGCCCC??-?CCTCGGG---CCCGGGA-CTCCCTA---------------------------------------------------------????-----CCT---AAC-C-----??-CCCCGGCGCAAG-ACGCGCCAAGGAACATCACAAACGATTCG-GCACT--G-CCTCGCAGGCCCAGAAAT--GGAGCGCTGCAGGG--TGT-GCGCCGTGTACAATAT-------GTCAATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--GTATGGCCAAGGGCAAGTCTGCCTGGGGGTCACACA--ACGTTGCCCCCCCC------AATCTTC-------CACGAAGAAGGTGGGGAGGGG-------CGGAAGCTGGCCTCCCGTGCGCCAA--GGTGTGCGGCTGGCCAAAATG-CGAGAGCTTCGGGCAAGGAGTGCCGCAACAATCGGTGGTT-GTC-AAGCCCTCGGT-G-???GTTGCGTGCGCGAGCTGCC-ATAACGGGCTTTCCGGTAGACCCCATCGCGCTGGGAAT----GCAGCGTTTCCA--ATGCGACCCACAGTCAGGCGGG-CCACC-GAAGAGA----11100???12112T11110221T2010?2 Colubrina_asiatica AAGGATCATTGTCGAAA-CC-TGCCC-?--CAGGA-ACGACCCGCGAACAAGTGGAAACAT???????---------GGGGGCTGCGGGGCCTTTTTGG-CTCCGGG---CTCTCTCGGCCGAGGG---CTGCACC-CTGCG---------------------------G?????-A--GGCCT---AA--?----????CCCCGGCGCGAA-ATGCGCCAAGGAACATCGTAAACGAACCG-GCA?-----ACCCCCGGCCCCAGAAAT--GGAGCGCCGTTCGTGGTGC-GCGTCGTATTCTATAT-------GTCAA-AACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCC--ATATGGCCGAGGGCACGTCTGCCTGGGT-TCACACA--ACGTTGCCCCCCCC-----AAACTTCT------ACCACGAAGGCAAGGGGGGGGGGG-----CGGAGGATGGCCTCCTGTGCGCGGT--GGCGCGCGGCTGGCCGAAAATGCAA-AGCCTCCGGCGAAGAGCGCCGCAACAATCGGTGGTT-GTCC-AACCCTCGGT-G-???GTTGCGCACGCTGATAGCC-GCTGTGG--CCCGATAG--ACCCCAACGCGCTGCTGCAAAAAATGCGGTCTCCA--ACGCGACCCC??-TCAGGCGGG--TACCCG----------111001??1111?011100221T001?1T ; END; BEGIN ASSUMPTIONS; USERTYPE ITS759_761 STEPMATRIX = 26 A C G T 4 5 6 7 8 9 B D E F H J K L M N P Q R 0 1 2 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . ; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; TYPESET * UNTITLED = unord: 1 - 805 , ITS759_761: 806 ; EXSET * ELIMINATE = 54 - 61 68 - 78 93 - 117 227 - 233 304 - 315 495 - 550 644 - 646 687 - 702 ; END;