#NEXUS

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=15;
	TAXLABELS
		'Coccomyxa subellipsoidea SAG_216_13_Lutzoni_AY328523' 'Coccomyxa subellipsoidea C169_NIES_2166' Coccomyxa_sp._S_255_PL_002_ITS 'Coccomyxa simplex SAG_216_9a_FN298926' 'Coccomyxa simplex SAG_216_5_HG972982' 'Coccomyxa simplex SAG_216_3b_HG972980' 'Coccomyxa simplex CCAP_812_2A_HG972992' 'Coccomyxa galuniae SAG_2253_KM020051' 'Coccomyxa vinatzeri ASIB_V16_HG972994' 'Coccomyxa polymorpha CAUP_H5101_HG972979' 'Coccomyxa dispar SAG_49_84_HG972998' 'Coccomyxa viridis SAG_216_1_HG972999' 'Coccomyxa viridis SAG_216_4_HG973001' 'Elliptochloris bilobata SAG_245_80_HG972969' 'Hemichloris antarctica SAG_62_90_HG972970' 
	;
END;

BEGIN CHARACTERS;
	TITLE  Coccomyxa_ITS_15x518;
	DIMENSIONS  NCHAR=518;
	FORMAT DATATYPE = DNA GAP = - MISSING = ?;
	MATRIX
	'Coccomyxa subellipsoidea SAG_216_13_Lutzoni_AY328523' aggtgaacctgcggaaggatcattgctcgatcaaacacaaaccgcgaaccaacgtatccccgcaggcggccgcgcttgtcctgatgcctgaggtctggcgggctggggaggctctttccctgggggaaaggccgcccggtcggcaaaaccccatcaatccgaaacgttctaaagactttgacggccgccctcgccaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccaagagtatgtctgcctcagcgtcggctttaccctcaccccccggaggcgtggacctggcagtcccggtcgcgaccgggtccgctgaagaccagaggctcgagcaaggacccgcatgggaaaacagtctggtaggtgacccggcgcatgccgctgttcgcccggattgctggaagccggcaggaa
	'Coccomyxa subellipsoidea C169_NIES_2166'             aggtgaacctgcggaaggatcattgctcgatcaaacacaaaccgcgaaccaacgtatccccgcaggcggccgcgcctgtcctgatgactcaggtctggcgggctggggaggcctcttccctaccgggaagaccgcccggtcggcaaacccccaaaaatccgaaacatcctaaagatattgacggccgccctcgccaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccaagagtatgtctgcctcagcgtcggctttaccctcaccccccgggggcgtggacctggcagtcccggtcgcgaccgggtccgctgaagaccagaggctcgagcaaggacccacatgggaaaacagtctggtaggtgacccggcgcatgccactgttcgcccggattgctggaagccggcaggaa
	Coccomyxa_sp._S_255_PL_002_ITS                        aggtgaacctgcggaaggatcattgctcgatcaaacacaaaccgcgaaccaacgtatccccgcaggcggccgcgcttgtcctgatgcctgaggtctggcgggctggggaggcctctttcccgggggaaaggccgcccggtcggcaaaaccccaccaatccgaaacgtactaaagattttgacggccgccctcgccaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatatttgaacgcaaattgcactcgaggctccggccaagagtatgtctgcctcagcgtcggctttaccctcaccccccggaggcgtggacctggcagtcccggtcgcgaccgggtccgctgaagaccagaggctcgagcaaggacccacatgggaaaacagtctggtaggtgacccggcgcatgccgctgttcgcccggattgctggaagccggcaggaa
	'Coccomyxa simplex SAG_216_9a_FN298926'               aggtgaacctgcggaaggatcattgctcgatcaaacacacaccgcgaacccacgtatccccgcgggcggctgcgcttgtcctgctacagcaggtctggcgggctggggaggccgctctcctccgggagagacctcccggtcggcaaaaccccaacgatccgaaaccgcctgaagacgtcgacggctgtcttctccaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccgagagtatgtctgcctcagcgtcggctttaccctcaccctctagaggcgtggacctggccgtcccggttataaccgggtctgccgaagaacagaggctcgaacgaggacccaatcgggacgacagtctggtaggtgacccatcgcatgccgccgtcggcccgggtcgttgtaagccggcaggaa
	'Coccomyxa simplex SAG_216_5_HG972982'                aggtgaacctgcggaaggatcattgctcgatcaaacacaaaccgcgaacccacgtatccccgcggccttctgcgcttgtcctgtcgaagcaggtctagcgggctggggaggccgctctcccccgggggaggccgcccggctggcaaaaccccatcgatccgaaaataactgaagatccggacagctgttctctccaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccgagagtatgtctgcctcagcgtcggcttcaccctcacccctcagaggcgtggacctggccgtcccggttacaaccgggtctgccgaagaacagaggctcgaacgaggacccaatcgggacaacagtctggtaggtgacccatcgcatgccgctgtcggcccgggtcgttgtaagccggcaggaa
	'Coccomyxa simplex SAG_216_3b_HG972980'               aggtgaacctgcggaaggatcattgctcgatcgaacacaaaccgcgaacccacgtatccccgcgggcggctgcgcttgtcctgtcgaagcgggtctggcgggctggggaggccgctctcccccggggaaggccgcccggctggcaaaaccccatcgatccgaaacgacctgaagatccggacggctgttctctccaaccgaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccgagagtatgtctgcctcagcgtcggcttcaccctcacccctcagaggcgtggacctggccgtcccggttacaaccgggtctgccgaagaacagaggctcgaacgaggacccattcgggacgacagtctggtaggtgacccatcgcatgccgctgtcggcccgggtcgttgtaagccggcaggaa
	'Coccomyxa simplex CCAP_812_2A_HG972992'              aggtgaacctgcggaaggatcattgctcgatcgaacacaaaccgcgaacccacgtatccccgcagaaggctgcgcttgtcccgtcgactcgggtctggcgggccggggaggccgcatttccccgggaggagcctcccggctggcgaaaccccatcaatccgaatacacctgaagatctcgacggccgtattctccaaccgaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccgagagtatgtctgcctcagcgtcggcttcaccctcacccctcggaggcgtggacctggccgtcccggttgtgaccgggtctgccgaagaacagaggctcgaacgaggacccgatcgggacaacagtctggtaggtgacccatcgcatgccgctgtcggcccgggtcgttgtaagccggcaggaa
	'Coccomyxa galuniae SAG_2253_KM020051'                aggtgaacctgcggaaggatcattgctcgatcgaacacaaacctgaaccttccgtatccccgctcttgatggcgcctgtcctgatgcttcaggtctggcgggccggggaggcctttcctctacaggaggggccgcccggtcggcaaaaccccacaaatcccaaacggactgaagctctcgactcgagcaggaaaaaaccgaagacaactctcaacaacggatatcttggctcccgtatcgatgaaaaacgcagcgaattgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccgagagtatgtctgcctcagcgtcggcttcaccctcacacaccggcgatgtggatctggcagtcccggttcgaaccgggtccgctgaagaccagaggctcgagcgaggacccgatcgggacaacagtctggtaggtgtttcaacgcatgccgctgtcggcccgggccgctgtaagccggcaggaa
	'Coccomyxa vinatzeri ASIB_V16_HG972994'               aggtgaacctgcggaaggatcattgctcgatcgaaaccacaccgtaaccccacgtatccccgcgggtttaagcgcctgtcctggcgattcaggtctggcgggctggggaggcccttctcttggagagggggccgtccagtcggccaaaccccacaaatccgaaaccgcctgaagatcttgacgaacgtcgaaaaaaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagagaatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccaagagtatgtctgcctcagcgtcggctttaccctcacctttcgggagagtggatctggcagtcccggttatagccgggtccgctgaagaccagaggctcgaacgaggacccaatcgggacaacagtctggtaggtggaccgtcgcatgccgctgtcggcccgggtcgttgtaagccggcaggaa
	'Coccomyxa polymorpha CAUP_H5101_HG972979'            aggtgaacctgcggaaggatcattgctcgatcgaacacaaaccgcgaaccatcgtttccccgctgggcggcgcgcttgtcctgacggcgcaggtctggcgggccggggaggcctctctccgtcggatgacgtcttcggctgggccaaaccccaagtaaccagcaaagcctgaagcacagggcggccgttcccagcaaccaatgacaactctcaacaatggatgtcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggcctcggccgagagtatgtctgcctcagcgtcggcttcacccctcgcctccaagcaggcggacgtggcggtctcggtcgcgaccgggtccgctgaagaccagaggctcgagcaaggccccaatcgggacaacagtctggtaggtgactcatcgcatgccgctgtcggcccgggttgctggaggccggaaggcg
	'Coccomyxa dispar SAG_49_84_HG972998'                 aggtgaacctgcggaaggatcattgctcgatcgaaccaatccaggtgaccatcgtacagccgagtccgctggcgccagccccggctcttcaaagaagaagagagggggcaaggtgtggcgggtcggcatcaacacgagctggctcaaaccccaccaatccaaccgagcctgaagcaaccactgggagcgagtacaaaccaatgacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcactcgaggctccggccaagagtatgcctgcctcagcgtcggtttacaccctcttctacggtgagaaggacctggctgtcccgattgcaatcgggtccgctgaagaacagaggcccgagcgtggacccactccgggcaacagtctggtaggcgattgatcgcatgccgctgttggccagggtcgctggaagccgcaagcag
	'Coccomyxa viridis SAG_216_1_HG972999'                aggtgaacctgcggaaggatcattgctcgatcaaacacctttcgcgaacacccgtctccccgcgctccgctgcgcctgccccggtggtcaaggtcaggcggtgcctggacgaggcttctccgccgacgactcctccggctgggacaaaccccaacgatcccatcaaatctgaagccgacctcgaaagagacttcaaaccaaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcgctcgaggcttcggccgagagcatgcctgcctcagtgtcggtttcaccctcgcccaccaggggagcggatctggccgtcccggtctcgaccgggtctgctgaagcgcagaggcttgagcgggatccctataggaacaacagaccggtaggtgagccatcgcatgccgctgctggcccgggcgctggacgcccagcaggag
	'Coccomyxa viridis SAG_216_4_HG973001'                aggtgaacctgcggaaggatcattgctcgatcaaacacctttcgcgaacactcgtctccccgcgctgtcttgcgcctgccccggtagtcaaggtcaggcggtgccgggatgaggctctctcgccgacgactcccccggctgggtcaaaccccaacgatcccatcaaatctgaagccgacctcgaaagagacttcaaacccaagacaactctcaacaacggatatcttggctcccgtatcgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaatcatcgaatctttgaacgcaaattgcgctcgaggcctcggccgagagcatgcctgcctcagtgtcggtttcaccctcgccacccaggggcgcggatctggccgtcccggtcttgatcgggtctgctgaagcgcagaggcttgagcgggattcccttcggaacaacagaccggtaggtgagccatcgcatgccgctgctggcccgggcgctggacgcccagcaggag
	'Elliptochloris bilobata SAG_245_80_HG972969'         aggtgaacctgcggaaggatcattgatcgatcagaccacaccggcaccgggctgtcctcccacagatcgctgcgcatgccctgctgctggaggtcgtgcgggccggggcggaggaggactctccgccgccgccgcgcgctggccaaaccaacaccgacccaaacaagcctgaagccaacgcctggcgcctcctcctaacaaagacaactctcaacaacggatatcttggttcccgtaacgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaaccatcgaatctttgaacgcaaattgcgccccaggcttcggccaaaggcatgcctgcctcagcgtcggcttcacccctccactccggggcgtgggatctggtggtctcagcttaggctgggtccgccgaagcacagaggcccgagcgggaccccactctgggcaacagtctggtaggcgattcgtcgcatgccgctggtgccccgggcgctgcacggcccgcaggaa
	'Hemichloris antarctica SAG_62_90_HG972970'           aggtgaacctgcggaaggatcattgatcgatcggaccactccggtgactctttttgtacccacagatcgctgcgcacgccctgctgttacaggtcgtgcgggccggtgcgcttggctgcctgagggagcggcgccgcgctggccaaacccgcaccaacgcaaccgagactgaagccgagctctcgcagctcaaataaccaaagacaactctcaacaacggatatcttggttcccgtaacgatgaagaacgcagcgaaatgcgatacgtagtgtgaattgcagataatgtgaaccatcgaatctttgaacgcaaattgcgcccgaggcctcggccaaaggcatgtctgcctcagcgtcggcttcaccccctcctctcaaggagagggacctggtggtctcggctccggccgggtccgccgaagagcagaggctcagccgctcccttcatacgggcaacagtctggtaggcgactcgtcgcatgccgctggtgccccgggcagtcggcggccggcaggaa
;
END;

BEGIN TREES;
	Title Coccomyxa_ITS_15x518;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 'Coccomyxa subellipsoidea SAG_216_13_Lutzoni_AY328523',
[1] 		2 'Coccomyxa subellipsoidea C169_NIES_2166',
[2] 		3 Coccomyxa_sp._S_255_PL_002_ITS,
[3] 		4 'Coccomyxa simplex SAG_216_9a_FN298926',
[4] 		5 'Coccomyxa simplex SAG_216_5_HG972982',
[5] 		6 'Coccomyxa simplex SAG_216_3b_HG972980',
[6] 		7 'Coccomyxa simplex CCAP_812_2A_HG972992',
[7] 		8 'Coccomyxa galuniae SAG_2253_KM020051',
[8] 		9 'Coccomyxa vinatzeri ASIB_V16_HG972994',
[9] 		10 'Coccomyxa polymorpha CAUP_H5101_HG972979',
[10] 		11 'Coccomyxa dispar SAG_49_84_HG972998',
[11] 		12 'Coccomyxa viridis SAG_216_1_HG972999',
[12] 		13 'Coccomyxa viridis SAG_216_4_HG973001',
[13] 		14 'Elliptochloris bilobata SAG_245_80_HG972969',
[14] 		15 'Hemichloris antarctica SAG_62_90_HG972970';
	TREE tree_1 = ((14:0.188301,15:0.186868):0.161658,(11:0.455408,((12:0.014188,13:0.044211):0.330832,(10:0.163979,((2:0.022836,(1:0.014746,3:0.007995):0.014234):0.064832,((8:0.13244,9:0.082807):0.054692,(4:0.034722,(5:0.017444,(6:0.010001,7:0.06796):0.006003):0.028933):0.043758):0.014246):0.085251):0.056398):0.085526):0.161658);

END;