#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=161; TAXLABELS Epichloe_sp._PT.2017a_KY285032_141v24 Epichloe_sp._PT.2017a_KY285031_141v4 Epichloe_sp._PT.2017a_KX685660_57v16 Epichloe_sp._PT.2017a_KX685661_57v17 Epichloe_sp._PT.2017a_KY285034_99v1 Epichloe_sp._PT.2017a_KY285033_99v27 Epichloe_brachyelytri_AF062427 Epichloe_typhina_poae_var._canariensis_AF176266 'Epichloe occultans C1_AF176268' 'Epichloe occultans C1_AF176269' 'Epichloe occultans C1_AF176270' 'Epichloe occultans C1_AF176271' 'Epichloe occultans C2_AF176272' 'Epichloe occultans C2_AF176274' 'Epichloe occultans C2_AF176275' 'Epichloe occultans C2_AF176276' Epichloe_elymi_AF250743 Epichloe_festucae_AF250747 Epichloe_typhina_AF250753 'Epichloe typhina poae_AF250757' 'Epichloe siegelii C1_AF308138' 'Epichloe siegelii C2_AF308139' Epichloe_aotearoae_AF323371 'Epichloe australiensis C1_AF323379' 'Epichloe australiensis C2_AF323381' 'Epichloe melicicola C1_AF323384' 'Epichloe melicicola C2_AF323386' 'Epichloe tembladerae C1_AF323389' 'Epichloe tembladerae C2_AF323390' Epichloe_mollis_AF457469 'Epichloe chisosa C1_AF457470' 'Epichloe chisosa C2_AF457471' 'Epichloe chisosa C3_AF457472' Epichloe_amarillans_AF457478 'Epichloe hordelymi C1_AF457486' 'Epichloe hordelymi C2_AF457487' Epichloe_bromicola_AF457488 'Epichloe funkii C1_AF457489' 'Epichloe funkii C2_AF457490' Epichloe_typhina_poae_var._huerfana_AF457493 Epichloe_inebrians_AF457494 'Epichloe tembladerae C1_AF457496' 'Epichloe tembladerae C2_AF457497' Epichloe_typhina_AM490796 Epichloe_bromicola_AY033369 Epichloe_bromicola_AY033371 Epichloe_bromicola_AY137612 'Epichloe typhina poae_AY163832' Epichloe_typhina_poae_var._aonikenkana_AY707694 'Epichloe tembladerae C1_AY707695' 'Epichloe tembladerae C1_AY707699' 'Epichloe tembladerae C1_AY707701' 'Epichloe tembladerae C1_AY707711' 'Epichloe tembladerae C1_AY707719' 'Epichloe cabralii C2_AY707720' 'Epichloe tembladerae C2_AY707721' 'Epichloe tembladerae C2_AY707725' 'Epichloe tembladerae C2_AY707727' 'Epichloe tembladerae C2_AY707737' 'Epichloe tembladerae C2_AY707745' 'Epichloe cabralii C1_AY707746' Epichloe_festucae_lolii_AY865628 Epichloe_yangzii_DQ134039 'Epichloe guerinii C1_EF422754' 'Epichloe guerinii C2_EF422755' Epichloe_gansuensis_EF422756 Epichloe_gansuensis_EF422757 Epichloe_typhina_EU375739 Epichloe_typhina_EU375740 'Epichloe sinica C1_EU409305' 'Epichloe sinica C1_EU409306' 'Epichloe sinica C1_EU409307' 'Epichloe sinica C2_EU409308' 'Epichloe sinica C2_EU409309' Epichloe_stromatolonga_EU526824 Epichloe_stromatolonga_EU526825 'Epichloe pampeana C1_FJ147181' 'Epichloe pampeana C2_FJ147188' 'Epichloe sinica C2_FJ189479' 'Epichloe sinofestucae C1_FJ211211' 'Epichloe sinofestucae C2_FJ211212' 'Epichloe sinofestucae C1_FJ211213' 'Epichloe sinofestucae C2_FJ211214' 'Epichloe sinofestucae C1_FJ211215' 'Epichloe sinofestucae C2_FJ211216' 'Epichloe sinofestucae C1_FJ211217' 'Epichloe sinofestucae C2_FJ211218' Epichloe_sibirica_GQ421698 Epichloe_sibirica_GQ421706 Epichloe_sibirica_GQ421707 Epichloe_aotearoae_GQ422364 Epichloe_bromicola_GU325782 'Epichloe schardlii C1_HM138504' 'Epichloe schardlii C2_HM138505' 'Epichloe liyangensis C1_HM475156' 'Epichloe liyangensis C1_HM475157' 'Epichloe liyangensis C2_HM475160' 'Epichloe liyangensis C2_HM475161' 'Epichloe disjuncta C1_JF718437' 'Epichloe disjuncta C2_JF718438' Epichloe_sylvatica_pollinensis_JF718439 'Epichloe disjuncta C1_JF718440' 'Epichloe disjuncta C2_JF718441' 'Epichloe disjuncta C1_JF718469' 'Epichloe disjuncta C2_JF718470' 'Epichloe danica C1_JF718475' 'Epichloe danica C2_JF718476' Epichloe_sylvatica_JF718479 Epichloe_bromicola_JN819475 Epichloe_bromicola_JN819476 Epichloe_bromicola_JN819479 Epichloe_bromicola_JN819485 'Epichloe canadensis C2_JN886777' 'Epichloe canadensis C1_JN886778' 'Epichloe typhina poae_JQ756453' Epichloe_gansuensis_KC936101 Epichloe_typhina_KC936103 Epichloe_typhina_KC936104 Epichloe_typhina_KC936105 Epichloe_sylvatica_KC936106 Epichloe_sylvatica_KC936107 Epichloe_sylvatica_KC936108 Epichloe_sylvatica_KC936109 Epichloe_typhina_KC936110 Epichloe_typhina_KC936111 Epichloe_typhina_KC936112 Epichloe_poae_KC936113 Epichloe_poae_KC936114 Epichloe_poae_KC936115 Epichloe_typhina_KC936116 Epichloe_typhina_KC936118 Epichloe_typhina_KC936124 Epichloe_typhina_KC936127 Epichloe_typhina_KC936142 Epichloe_festucae_lolii_KC936144 Epichloe_uncinata_L06946 'Epichloe coenophiala C2_L06951' Epichloe_festucae_L06955 Epichloe_amarillans_L06958 Epichloe_amarillans_L06959 Epichloe_baconii_L06961 Epichloe_elymi_L06962 'Epichloe coenophiala C1_L06964' Epichloe_festucae_lolii_L20304 Epichloe_baconii_L78270 Epichloe_brachyelytri_L78271 Epichloe_elymi_L78273 Epichloe_glyceriae_L78275 Epichloe_glyceriae_L78276 Epichloe_typhina_L78277 Epichloe_sylvatica_L78278 Epichloe_baconii_L78279 Epichloe_clarkii_L78281 Epichloe_typhina_L78284 Epichloe_typhina_L78288 Epichloe_bromicola_L78289 Epichloe_bromicola_L78290 Epichloe_sylvatica_L78291 'Epichloe bromicola NI_201308' Epichloe_typhina_X52616 'Epichloe coenophiala C3_X56847' ; END; BEGIN CHARACTERS; TITLE Epichloe_tub; DIMENSIONS NCHAR=467; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Epichloe_sp._PT.2017a_KY285032_141v24 --------AAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG---CCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KY285031_141v4 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_sp._PT.2017a_KX685660_57v16 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTGATTT-GGGCAGAGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KX685661_57v17 --------AAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_sp._PT.2017a_KY285034_99v1 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCTGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_sp._PT.2017a_KY285033_99v27 ---------AAGTTGACCTCTCTG----TTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCCAGT----GTTAA--GCCCTGATTTCGTACCCC-----GCCGGGCCCGAGCACGACG-TACACGCCCGCGGCACAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGCAGAGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGAC-- Epichloe_brachyelytri_AF062427 --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGAACCCC-----GCCGAGTGCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTCATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGGAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACACACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_poae_var._canariensis_AF176266 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGG-------------------------TCTCCATTGAGC----TACATACCG-C-CCTGAAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe occultans C1_AF176268' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GAGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176269' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GAGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176270' --------AAGTTCAAA--CTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C1_AF176271' --------AAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CCCTCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----CCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----AAC-AGGCACAAACA--GCATGAAAAATCTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAAA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe occultans C2_AF176272' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176274' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176275' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG 'Epichloe occultans C2_AF176276' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCTGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTTTCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGATC----------GA--TAAAAAGTGTGAAC--ATGCTAATCTATGTGACAG Epichloe_elymi_AF250743 --------AAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_festucae_AF250747 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_typhina_AF250753 -----------TTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCAAAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG 'Epichloe typhina poae_AF250757' --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe siegelii C1_AF308138' -------------------------------------GGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe siegelii C2_AF308139' --------AAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_aotearoae_AF323371 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG 'Epichloe australiensis C1_AF323379' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe australiensis C2_AF323381' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe melicicola C1_AF323384' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-G-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe melicicola C2_AF323386' -----------------CTCTCTG---TTTGTCTTGGGG--CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C1_AF323389' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C2_AF323390' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAGTTCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_mollis_AF457469 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG-CCCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATCAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCTTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAAAA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe chisosa C1_AF457470' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAACGACAGAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG 'Epichloe chisosa C2_AF457471' -----------------TTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATTAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe chisosa C3_AF457472' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAG-ACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_amarillans_AF457478 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--GTTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG 'Epichloe hordelymi C1_AF457486' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAGGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe hordelymi C2_AF457487' -----------------TTCTGTG---TTTGTATTGGGGA-TCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTCCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATCAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGT--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AF457488 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTTTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe funkii C1_AF457489' -----------------CGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG 'Epichloe funkii C2_AF457490' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_typhina_poae_var._huerfana_AF457493 --------------------------------------GA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_inebrians_AF457494 -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AATCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTATTTCGAGAACTG-TAGCTGATC--CATTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCAGAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAAAAAAAA--AAAAAAGTGTTGTC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C1_AF457496' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C2_AF457497' -----------------CTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_AM490796 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----ATGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGAACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY033369 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTTTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY033371 -----------------------------------GGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_AY137612 --------AAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATTT----GAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe typhina poae_AY163832' -----------------------------TGTCTTGGGTA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTTTCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_poae_var._aonikenkana_AY707694 --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCTT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-T-GCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C1_AY707695' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707699' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707701' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707711' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C1_AY707719' ------GTAAGTTCAACCTCTCTGGCCTTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe cabralii C2_AY707720' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-GGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGGAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG 'Epichloe tembladerae C2_AY707721' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707725' --------GAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-CTCCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707727' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707737' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe tembladerae C2_AY707745' -------TGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGGTTTATC--ATGCTAATCTATGTGACAG 'Epichloe cabralii C1_AY707746' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---C-GAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_festucae_lolii_AY865628 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_yangzii_DQ134039 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTGTTGATTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGATTTCGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe guerinii C1_EF422754' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCTCCCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG 'Epichloe guerinii C2_EF422755' ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_gansuensis_EF422756 ------GTAAGTTTGACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAAAAGAAGAAGGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_gansuensis_EF422757 ------GTAAGTTTGACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAAAAGAAAAAGGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_typhina_EU375739 ------GTGAGTTCAAC--CTCTG---TTTGTCTTGGGGACCCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TATTT---------TCTTTGCCTCTAGCAGTGCGTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAGC-------GGAG--AAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_EU375740 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGACCCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TATTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAGC-------GGAG--AAAAAAGTATTATC--ATGCTAATCTATGTGACAG 'Epichloe sinica C1_EU409305' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C1_EU409306' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C1_EU409307' GAGATTGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinica C2_EU409308' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGGATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--A------------------ 'Epichloe sinica C2_EU409309' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTAT---------------------- Epichloe_stromatolonga_EU526824 --------AAGTTCAACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGGC------AAAATTAATGCATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTCCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTAGAAC----GAA-AGGCACAAACA--GCATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TTTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_stromatolonga_EU526825 --------AAGTTCAACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGGC------AAAATTAATGCATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTCCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTAGAAC----GAA-AGGCACAAACA--GCATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TTTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG 'Epichloe pampeana C1_FJ147181' ----------------------------------------------------------------------------------------------------------------------G-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GA--------------------------------- 'Epichloe pampeana C2_FJ147188' ----------------------------------------------------------------------------------------------------------------------G-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC----TTT---------GCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCT-------------- 'Epichloe sinica C2_FJ189479' ------------TCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGCCC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAGGTGTTATC--ATGCTA------------- 'Epichloe sinofestucae C1_FJ211211' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCCCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C2_FJ211212' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- 'Epichloe sinofestucae C1_FJ211213' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATG---------------- 'Epichloe sinofestucae C2_FJ211214' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C1_FJ211215' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe sinofestucae C2_FJ211216' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- 'Epichloe sinofestucae C1_FJ211217' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATA---------------- 'Epichloe sinofestucae C2_FJ211218' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--AT----------------- Epichloe_sibirica_GQ421698 ------GTAAGTTTGACCTCTCTG---GTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_sibirica_GQ421706 ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_sibirica_GQ421707 ------GTAAGTTTGACCTCTCTG---TTTGTCTCGGGGA-ACCCCT-CATCGACGCGTTCCAGTG----TTAAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGACCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCTTGTTGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAACTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATCA--AAAAAG-TCTCCATTGAGC----TGCATACCG-C-TCTGGAGATGAGA---CGGAAAGAGAACGAAAAATAAAAA--GAAAAAATGTTAAC--ATGCTAATCTATGTGACAG Epichloe_aotearoae_GQ422364 --------------------------------------------------------------GGTG----TTGAGCCCCCCTGATTTCGTACCCC-----GCCGAGCCCGACCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGACACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCCGGAGATGAGA---C------------------------------------------------------------ Epichloe_bromicola_GU325782 ------GTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCTCAATGGAC-AGTCGTGATGAGAGGCGGCCCGAGAC---AAAAAAATTAACGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe schardlii C1_HM138504' ------------------------------------------------CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe schardlii C2_HM138505' ------------------------------------------------CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe liyangensis C1_HM475156' ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTGTTGATTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGATTTCGGAAAGAGAAC----------GA--TGAAAAGTGTT------------------------ 'Epichloe liyangensis C1_HM475157' ------GTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCATT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTT------------------------ 'Epichloe liyangensis C2_HM475160' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe liyangensis C2_HM475161' GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----CACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C1_JF718437' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C2_JF718438' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_sylvatica_pollinensis_JF718439 ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG 'Epichloe disjuncta C1_JF718440' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C2_JF718441' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C1_JF718469' ----------------CCCCTCTG---TTTGTCTTGGGGG-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAATGATTGCGGTA-TTCGAGAATTG-TAGCTGACCTTTTTTTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--C-----GAAAACTCACATTTGTTT-GGGC--AGGTAAGTCTTCGTAATCT----TAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAGGTGTCATC--ATGCTAATCTATGTGACAG 'Epichloe disjuncta C2_JF718470' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACTCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG 'Epichloe danica C1_JF718475' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGCAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG 'Epichloe danica C2_JF718476' ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTCATCTATGTGACAG Epichloe_sylvatica_JF718479 ----------------CCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTCATCTATGTGACAG Epichloe_bromicola_JN819475 ------GTAAGTTCAACTTCTCTG---TTTGTCTCGAGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819476 ----------GTTCAACTTCTCTG---TTTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819479 ------GTAAGTTCAACTTCTCTG---TTTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCCAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG Epichloe_bromicola_JN819485 ------GTAAGTTCAACTTCTCTG---TGTGTCTCGGGGA--CCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACA---TTTT---------ACTTCCCCTCCAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGATAG 'Epichloe canadensis C2_JN886777' -----------TTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGACAAGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG 'Epichloe canadensis C1_JN886778' -----------TTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCTGACCGAGAC------AAAATGAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG 'Epichloe typhina poae_JQ756453' -------------------------------------------CCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAGCTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_gansuensis_KC936101 ---------------------------TTTGTCTTGGGGA-CCCCCT-CATCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGGGCCCGGCCACGACG-TACACGCCCGCGGCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AGAATTAATGATTGCGGTA-TTCGAGAACTG-TAGCTGATC--TTTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACTTG--AAAACTCACATTTATTT-GGGC--AGGCAAGTTTTCATAATC---AAAAAG-TCTCCATTGAGC----TGTATACCG-C-TCTGGAGATAAGA---CGGAAAGAGAACGAAAAA--AAAA--AAAAAAGTTTTTTC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936103 ------GTGAGTCCAACCTCTCTG---TTTGTCTTGGGGA-CCCTCT-CCTCGACGCGTTCCCGTG----TCGAG--CCCCTGATTTCGTACCCCGCCGAGCCGAGCCCGGCCACGACG-TGCAT-------GCCCAACGGACAAGTCGTGATGAGAGGCGGGCCGAGAC------AACATTGATGAATGCTGTA-TTCGAAAACCG-TAGCTGACCTTTTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCTAAAAAAAG-TCCCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGATG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936104 ------GTGAGTCCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCCGCCGAGCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGGCCGAGAC------AACATTGATGAATGCTGTA-TTCGAAAACCG-TAGCTGACCTTTTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCCCCATTGAGC----TACATACCG-C-CCTGGAGATTGGA---CAGGAAAAGATG--------GAAA--GAAAAAGTGCCATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936105 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936106 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CAGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936107 ------GTGAGTTCAACCTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936108 ------GTGAGTACAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_KC936109 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936110 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936111 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_typhina_KC936112 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGGAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTGTGTGACAG Epichloe_poae_KC936113 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTTTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_poae_KC936114 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGAAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_poae_KC936115 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936116 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAACCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAGATA--ACATG-AAAAACTCACATTGACTTGGGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTCATC--ATGCTAACCTATGTGACAG Epichloe_typhina_KC936118 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAACCT-AAAAAAG-TCCCCATTGAGC----TATATACCG-C-CCTGGAGATGGGG---CGGGAAAAGATG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936124 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCTATTGAGC----TACATACCG-C-CCCGGAGATGGGA---CGGGAAAAGAAG--------CAAA--TAAAACGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936127 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-T-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_KC936142 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTAAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_festucae_lolii_KC936144 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_uncinata_L06946 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe coenophiala C2_L06951' GAGATTGTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TG-TTCTTCCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_festucae_L06955 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGAAG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGGGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_amarillans_L06958 ----------GTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATGAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_amarillans_L06959 ----------GTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAACGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--GTTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAACA--ACATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAGA--GAAAAAGTGTCATC--ATGCTCATCCATGTGACAG Epichloe_baconii_L06961 ----------GTTCAAACTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCACCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCTTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAAAGAAC--------GAAA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_elymi_L06962 ------GTAAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACGTTGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG 'Epichloe coenophiala C1_L06964' ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCTGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_festucae_lolii_L20304 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGGA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_baconii_L78270 ------GTAAGTTCAAGCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCAAAC----GAC-GGGCACAAACA--GCATG-AAAAACTCACATTCATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGGAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG Epichloe_brachyelytri_L78271 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGAACCCC-----GCCGAGTGCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AAAATTCATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGGAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTCATC--ATGCTAATCTATGTGACAG Epichloe_elymi_L78273 ------GTAAGTTTAACCGCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGACAAGTCGTGATGAGAGGCGGACCGAGAC----AAAAAATTAATGATTGCGGTA-TTCGAGAACTGTTAGCTGACC---TTTT---------TCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTAGAAC----GAC-GGGCACAAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATCATATGCTAATCTATGTGACAG Epichloe_glyceriae_L78275 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCC----CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAAAGATTGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTTCTTCCTCTCTTCTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAGC----GAC-AGGCACCAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TATATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATA--ATGCTAATCTATGTGACAG Epichloe_glyceriae_L78276 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCC----CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAAAGATTGCGGTA-TTCGAGAACTG-TAGCTGACC--TTTTTCTTCCCCTCTTCTCCCCTCTAG------GTAA--GTGACAAATTCGCCGACCTCGAGC----GAC-AGGCACCAATA--ACATG-AAAAACTCACATTTATTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TATATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTCATA--ATGCTAATCTATGTGACAG Epichloe_typhina_L78277 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGGTGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATGAAAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCGCC-CCTGGAGACGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_L78278 ------GTGAGTTCATTCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTAGTGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_baconii_L78279 ------GTAAGTTCAAACTCCCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCTCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATG-AAAAACTCACATTCTTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAAAGAAC--------GAAA--GAAAAAGTGCTATC--ATGCTCATCCATGTGACAG Epichloe_clarkii_L78281 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCTCCCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_L78284 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGATGCGTTCCGGTG----TCGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGAC-AGTCGTGATGAGAGGCGGACCGAGAC------AACATCATTGAATGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGC--------------------AAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCTAATCTATGTGACAG Epichloe_typhina_L78288 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAACGCGGTA-TTCGAAAACCG-TAGCTGACT---TTTT---------TATTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GACAAGGCACAGATA--ACATG-AAAAACTCACATTGACTT-GGGC--AGGCAAGTCTTCATAATCT-AAAAAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGGAAAAGAAG--------CGAA--GAAAAAGTATTATC--ATGCTAATCTATGTGACAG Epichloe_bromicola_L78289 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC---AAAAAAAATAATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATAACACATG-GAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TGCATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_bromicola_L78290 ------GTAAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGAAC-AGTCGTGATGAGAGGCGGACCGAGAC-AAAAAAAAAATGATGATTGCGGTA-TTCGAGAACTG-TAGCTGACC---TTTT---------CCTTCCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTTGAAC----GAC-AGGCACAAACAACACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TAAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_sylvatica_L78291 ------GTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCGGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCATGATGAGAGGCGGACCGAGAC------AACATTAATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC---TTTT---------TCTTTCCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGGGA---CGGAAAAAGAAG--------GAAA--GAAAAAGTGTTATC--ATGCCCATCTATGTGACAG 'Epichloe bromicola NI_201308' GAGAAAGTAAGTTCAACTTCTCTG---TTTGTCTTGGGGA-CCCCCC-CCTCGACGCGTTCCAGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAATGGAC-AGTCGTGATGAGAGGCGGACCGAGAC--AAAAAAAATTAATGATTGCGGTA-TTCGAGAACTG-TCGCTGACA---TTTT---------ACTTCCCCTCTAG------GTAAGTGTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTTCTTT-GGGC--AGGTAAGTCTTCATAATTT----AAAG-TCTCCATTGAGC----TACATACCG-C-CCTGGAGATGAGA---CGGAAAGAGAAC----------GA--TGAAAAGTGTTAAC--ATGCTAATCTATGTGACAG Epichloe_typhina_X52616 GAGATTGTGAGTTCAACCTCTCTG---TTTGTCTTGGGGA-CCCCCT-CCTCGACGCGTTCCCGTG----TTGAG--CCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGGACAAGTCGTGATGAGAGGCGGACCGAGAC------AACATTGATGAATGCGGTA-TTCGAAAACCG-TAGCTGACC--TTTTT---------TCTTTGCCTCTAG------GTAA--GTGACAAATCCGCCGACCTCGAAC----GAC-AGGCACAAATA--ACATG-AAAAACTCACATTGATTT-GGGC--AGGCAAGTCTTCATAATCT-ACAAAAG-TCTCCATTGAGC----TACATACTG-C-CCTGGAGATGGGG---CGGGAGAAGATG--------GAAA--GGAAAAGTGTTATC--ATGCTAATCTATGTGACAG 'Epichloe coenophiala C3_X56847' GAGATTGTAAGTTCAAACTCTCTG---TCTGTCTTGGAAC-CTCTCT-CCTCGACGCGTTCCGGTG----TTGAGCCCCCCTGATTTCGTACCCC-----GCCGAGCCCGGCCACGACG-TGCAC-------GCCCAACGAAC-AGTCGTGATGAGAGGCGGATCGAGAC------AAAATTAATGAATGCGGTA-TTCGAGAACTG-TAGCTGACC--TGTTTCTTTCCCTCTTTTCCCCTCTAG------GTAA--GTGACAAA-TCGCCGACCTCGAAC----GAC-AGGCACAAACA--GCATGAAAAAACTCACATTCATTT-GGGC-GAGGTAAGTCTTCATAATCT----AAAG-TCTCCGTTGAGCTACATACATACCG-C-CCCGGAGATGAGA---CGGAAAGAGAAC--------GAAA--GAAAAAGTGTTATC--ATGCTCATCCATGTGACAG ; END; BEGIN TREES; Title Epichloe_tub; LINK Taxa = Taxa; TRANSLATE [0] 1 Epichloe_sp._PT.2017a_KY285032_141v24, [1] 2 Epichloe_sp._PT.2017a_KY285031_141v4, [2] 3 Epichloe_sp._PT.2017a_KX685660_57v16, [3] 4 Epichloe_sp._PT.2017a_KX685661_57v17, [4] 5 Epichloe_sp._PT.2017a_KY285034_99v1, [5] 6 Epichloe_sp._PT.2017a_KY285033_99v27, [6] 7 Epichloe_brachyelytri_AF062427, [7] 8 Epichloe_typhina_poae_var._canariensis_AF176266, [8] 9 'Epichloe occultans C1_AF176268', [9] 10 'Epichloe occultans C1_AF176269', [10] 11 'Epichloe occultans C1_AF176270', [11] 12 'Epichloe occultans C1_AF176271', [12] 13 'Epichloe occultans C2_AF176272', [13] 14 'Epichloe occultans C2_AF176274', [14] 15 'Epichloe occultans C2_AF176275', [15] 16 'Epichloe occultans C2_AF176276', [16] 17 Epichloe_elymi_AF250743, [17] 18 Epichloe_festucae_AF250747, [18] 19 Epichloe_typhina_AF250753, [19] 20 'Epichloe typhina poae_AF250757', [20] 21 'Epichloe siegelii C1_AF308138', [21] 22 'Epichloe siegelii C2_AF308139', [22] 23 Epichloe_aotearoae_AF323371, [23] 24 'Epichloe australiensis C1_AF323379', [24] 25 'Epichloe australiensis C2_AF323381', [25] 26 'Epichloe melicicola C1_AF323384', [26] 27 'Epichloe melicicola C2_AF323386', [27] 28 'Epichloe tembladerae C1_AF323389', [28] 29 'Epichloe tembladerae C2_AF323390', [29] 30 Epichloe_mollis_AF457469, [30] 31 'Epichloe chisosa C1_AF457470', [31] 32 'Epichloe chisosa C2_AF457471', [32] 33 'Epichloe chisosa C3_AF457472', [33] 34 Epichloe_amarillans_AF457478, [34] 35 'Epichloe hordelymi C1_AF457486', [35] 36 'Epichloe hordelymi C2_AF457487', [36] 37 Epichloe_bromicola_AF457488, [37] 38 'Epichloe funkii C1_AF457489', [38] 39 'Epichloe funkii C2_AF457490', [39] 40 Epichloe_typhina_poae_var._huerfana_AF457493, [40] 41 Epichloe_inebrians_AF457494, [41] 42 'Epichloe tembladerae C1_AF457496', [42] 43 'Epichloe tembladerae C2_AF457497', [43] 44 Epichloe_typhina_AM490796, [44] 45 Epichloe_bromicola_AY033369, [45] 46 Epichloe_bromicola_AY033371, [46] 47 Epichloe_bromicola_AY137612, [47] 48 'Epichloe typhina poae_AY163832', [48] 49 Epichloe_typhina_poae_var._aonikenkana_AY707694, [49] 50 'Epichloe tembladerae C1_AY707695', [50] 51 'Epichloe tembladerae C1_AY707699', [51] 52 'Epichloe tembladerae C1_AY707701', [52] 53 'Epichloe tembladerae C1_AY707711', [53] 54 'Epichloe tembladerae C1_AY707719', [54] 55 'Epichloe cabralii C2_AY707720', [55] 56 'Epichloe tembladerae C2_AY707721', [56] 57 'Epichloe tembladerae C2_AY707725', [57] 58 'Epichloe tembladerae C2_AY707727', [58] 59 'Epichloe tembladerae C2_AY707737', [59] 60 'Epichloe tembladerae C2_AY707745', [60] 61 'Epichloe cabralii C1_AY707746', [61] 62 Epichloe_festucae_lolii_AY865628, [62] 63 Epichloe_yangzii_DQ134039, [63] 64 'Epichloe guerinii C1_EF422754', [64] 65 'Epichloe guerinii C2_EF422755', [65] 66 Epichloe_gansuensis_EF422756, [66] 67 Epichloe_gansuensis_EF422757, [67] 68 Epichloe_typhina_EU375739, [68] 69 Epichloe_typhina_EU375740, [69] 70 'Epichloe sinica C1_EU409305', [70] 71 'Epichloe sinica C1_EU409306', [71] 72 'Epichloe sinica C1_EU409307', [72] 73 'Epichloe sinica C2_EU409308', [73] 74 'Epichloe sinica C2_EU409309', [74] 75 Epichloe_stromatolonga_EU526824, [75] 76 Epichloe_stromatolonga_EU526825, [76] 77 'Epichloe pampeana C1_FJ147181', [77] 78 'Epichloe pampeana C2_FJ147188', [78] 79 'Epichloe sinica C2_FJ189479', [79] 80 'Epichloe sinofestucae C1_FJ211211', [80] 81 'Epichloe sinofestucae C2_FJ211212', [81] 82 'Epichloe sinofestucae C1_FJ211213', [82] 83 'Epichloe sinofestucae C2_FJ211214', [83] 84 'Epichloe sinofestucae C1_FJ211215', [84] 85 'Epichloe sinofestucae C2_FJ211216', [85] 86 'Epichloe sinofestucae C1_FJ211217', [86] 87 'Epichloe sinofestucae C2_FJ211218', [87] 88 Epichloe_sibirica_GQ421698, [88] 89 Epichloe_sibirica_GQ421706, [89] 90 Epichloe_sibirica_GQ421707, [90] 91 Epichloe_aotearoae_GQ422364, [91] 92 Epichloe_bromicola_GU325782, [92] 93 'Epichloe schardlii C1_HM138504', [93] 94 'Epichloe schardlii C2_HM138505', [94] 95 'Epichloe liyangensis C1_HM475156', [95] 96 'Epichloe liyangensis C1_HM475157', [96] 97 'Epichloe liyangensis C2_HM475160', [97] 98 'Epichloe liyangensis C2_HM475161', [98] 99 'Epichloe disjuncta C1_JF718437', [99] 100 'Epichloe disjuncta C2_JF718438', [100] 101 Epichloe_sylvatica_pollinensis_JF718439, [101] 102 'Epichloe disjuncta C1_JF718440', [102] 103 'Epichloe disjuncta C2_JF718441', [103] 104 'Epichloe disjuncta C1_JF718469', [104] 105 'Epichloe disjuncta C2_JF718470', [105] 106 'Epichloe danica C1_JF718475', [106] 107 'Epichloe danica C2_JF718476', [107] 108 Epichloe_sylvatica_JF718479, [108] 109 Epichloe_bromicola_JN819475, [109] 110 Epichloe_bromicola_JN819476, [110] 111 Epichloe_bromicola_JN819479, [111] 112 Epichloe_bromicola_JN819485, [112] 113 'Epichloe canadensis C2_JN886777', [113] 114 'Epichloe canadensis C1_JN886778', [114] 115 'Epichloe typhina poae_JQ756453', [115] 116 Epichloe_gansuensis_KC936101, [116] 117 Epichloe_typhina_KC936103, [117] 118 Epichloe_typhina_KC936104, [118] 119 Epichloe_typhina_KC936105, [119] 120 Epichloe_sylvatica_KC936106, [120] 121 Epichloe_sylvatica_KC936107, [121] 122 Epichloe_sylvatica_KC936108, [122] 123 Epichloe_sylvatica_KC936109, [123] 124 Epichloe_typhina_KC936110, [124] 125 Epichloe_typhina_KC936111, [125] 126 Epichloe_typhina_KC936112, [126] 127 Epichloe_poae_KC936113, [127] 128 Epichloe_poae_KC936114, [128] 129 Epichloe_poae_KC936115, [129] 130 Epichloe_typhina_KC936116, [130] 131 Epichloe_typhina_KC936118, [131] 132 Epichloe_typhina_KC936124, [132] 133 Epichloe_typhina_KC936127, [133] 134 Epichloe_typhina_KC936142, [134] 135 Epichloe_festucae_lolii_KC936144, [135] 136 Epichloe_uncinata_L06946, [136] 137 'Epichloe coenophiala C2_L06951', [137] 138 Epichloe_festucae_L06955, [138] 139 Epichloe_amarillans_L06958, [139] 140 Epichloe_amarillans_L06959, [140] 141 Epichloe_baconii_L06961, [141] 142 Epichloe_elymi_L06962, [142] 143 'Epichloe coenophiala C1_L06964', [143] 144 Epichloe_festucae_lolii_L20304, [144] 145 Epichloe_baconii_L78270, [145] 146 Epichloe_brachyelytri_L78271, [146] 147 Epichloe_elymi_L78273, [147] 148 Epichloe_glyceriae_L78275, [148] 149 Epichloe_glyceriae_L78276, [149] 150 Epichloe_typhina_L78277, [150] 151 Epichloe_sylvatica_L78278, [151] 152 Epichloe_baconii_L78279, [152] 153 Epichloe_clarkii_L78281, [153] 154 Epichloe_typhina_L78284, [154] 155 Epichloe_typhina_L78288, [155] 156 Epichloe_bromicola_L78289, [156] 157 Epichloe_bromicola_L78290, [157] 158 Epichloe_sylvatica_L78291, [158] 159 'Epichloe bromicola NI_201308', [159] 160 Epichloe_typhina_X52616, [160] 161 'Epichloe coenophiala C3_X56847'; TREE PAUP_1 = (((41:0.013622,(116:0.005797,(66:0.002632,67:0.0):0.002595):0.008142):0.002013,(6:0.036803,((65:0.0,(1:0.0,4:0.0):0.0):0.00263,(88:0.002647,(89:0.0,90:0.005313):0.0):0.0):0.0):0.023163):0.02766,((((38:0.0,(113:0.0,(147:0.0,(17:0.0,142:0.0):0.0):0.0):0.0):0.011313,((148:0.002724,149:0.0):0.020767,(104:0.0,(99:0.0,102:0.0):0.0):0.036397):0.004954):0.0,((32:0.005934,(92:0.008462,((110:0.0,(109:0.00281,(111:0.0,112:0.002819):0.00281):0.0):0.005636,(36:0.01554,((47:0.002777,159:0.008243):0.0,(96:0.0,(72:0.0,(70:0.0,71:0.0):0.0):0.0):0.00274):0.008269):0.0):0.0):0.002684):0.008152,((14:0.0,(13:0.0,(15:0.0,16:0.0):0.002789):0.0):0.016034,(156:0.006708,((37:0.0,45:0.0):0.002889,(84:0.0,(157:0.002768,(80:0.002724,((86:0.001272,95:0.00286):0.001545,(63:0.0,(82:0.0,(106:0.0,(21:0.0,46:0.0):0.0):0.002881):0.0):0.0):0.0):0.0):0.0):0.0):0.004366):0.0):0.007738):0.016334):0.0,((((34:0.0,140:0.0):0.008251,(31:0.002804,(114:0.002725,139:0.0):0.002725):0.0):0.007447,(28:0.006616,((75:0.0,76:0.0):0.028896,((30:0.008446,(55:0.0,145:0.005388):0.008083):0.0,((24:0.002789,137:0.0):0.004089,(((141:0.002722,152:0.0):0.022197,(77:0.0,(161:0.002552,(11:0.0,(12:0.005392,(9:0.0,10:0.0):0.002683):0.0):0.005482):0.021638):0.000000011042):0.00367,(135:0.0,(62:0.0,(42:0.0,(39:0.0,(26:0.002796,(138:0.0,(53:0.0,(52:0.0,(51:0.0,(50:0.0,(54:0.0,(18:0.0,22:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.002312):0.000361):0.0):0.004163):0.0):0.003783):0.001691):0.0):0.005095):0.025149,(((7:0.002791,146:0.0):0.014238,(91:0.003957,(23:0.0,27:0.0):0.0):0.011693):0.0,(((151:0.005594,(122:0.002794,(121:0.002784,(124:0.0,(120:0.002784,(123:0.0,(73:0.002833,74:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.002742,((119:0.0,(158:0.00278,(107:0.002886,108:0.0):0.0):0.002788):0.002779,((35:0.005136,((153:0.002735,(144:0.002735,160:0.0):0.0):0.011154,(130:0.019428,(131:0.005499,(117:0.008163,118:0.008254):0.014082):0.003054):0.0):0.002982):0.005385,(132:0.013634,((133:0.002688,155:0.014037):0.005666,((68:0.0,69:0.0):0.011383,((19:0.002793,150:0.005481):0.002747,(64:0.0,134:0.002732):0.0):0.0):0.0):0.007425):0.004928):0.007679):0.0):0.011198,((103:0.017877,((101:0.011699,126:0.0):0.002778,(125:0.0,(100:0.0,105:0.002882):0.0):0.0):0.005618):0.008539,((25:0.0,83:0.0):0.002809,(((48:0.009579,93:0.0):0.0,(154:0.002907,(20:0.0,(33:0.0,(87:0.0,(85:0.0,(79:0.006118,81:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,(44:0.011438,(((127:0.002905,(8:0.0,128:0.0):0.002907):0.0,(143:0.0,(61:0.0,(136:0.0,(129:0.0,(78:0.004199,94:0.0):0.0):0.0):0.0):0.0):0.0):0.0,((49:0.002923,(97:0.0,(98:0.002847,(40:0.0,115:0.0):0.0):0.0):0.0):0.0,((5:0.0,(2:0.0,3:0.00291):0.0):0.00582,(29:0.003039,(59:0.0,(58:0.0,(56:0.0,(60:0.0,(43:0.0,57:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.005843):0.002836):0.002828):0.005493):0.002751):0.0):0.005455):0.01398):0.005506):0.005935):0.02766)[% ] [% ] [% setBetweenBits = selected ]; END;