#NEXUS
[written Tue Feb 04 21:44:33 CST 2020 by Mesquite  version 3.61 (build 927) at DESKTOP-1G0DPDR/192.168.10.129]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=30;
	TAXLABELS
		Chlamydomonas_reinhardtii_SMT7 Arabidopsis_thaliana_OTS1 Arabidopsis_thaliana_OTS2 Arabidopsis_thaliana_ESD4 Arabidopsis_thaliana_ELS1 Arabidopsis_thaliana_ELS2 Arabidopsis_thaliana_FUG1 Arabidopsis_thaliana_SPF1 Arabidopsis_thaliana_SPF2 Saccharomyces_cerevisiae_ULP1 Saccharomyces_cerevisiae_ULP2 Homo_sapiens_SENP1 Homo_sapiens_SENP2 Homo_sapiens_SENP3 Homo_sapiens_SENP5 Homo_sapiens_SENP6 Homo_sapiens_SENP7 Zea_mays_ESD4a Zea_mays_ESD4b Zea_mays_ESD4c Zea_mays_ESD4d Zea_mays_OTS1a Zea_mays_OTS1b Zea_mays_OTS1c Zea_mays_OTS1d Oryza_sativa_ELS1 Oryza_sativa_ELS2 Oryza_sativa_SPF1 Oryza_sativa_OTS3 Oryza_sativa_FUG1 
	;

END;


BEGIN CHARACTERS;
	TITLE  'Supplemental figure 2B_alignment';
	DIMENSIONS  NCHAR=493;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Chlamydomonas_reinhardtii_SMT7  -WLNDEVINLYML-LLQ---ER--DTRL--RQLGGGGGGGAANGAAGGGGGGGGGYPRCHFFNSFFYNKLF------QDENKY-------NYANVRRWTMPARLRNGMQATPDQSVLLLDRVLLPVHQG-IHW--CC-----AEVDM-----------------------------------------------------------------------------------------------------------------A------------------------------------------------AR------------------------------------A-VRYYDSL-K-G-EDR-Q--CVQHLLQWVADE-SQDKLKTR--------WDTS-KW-----TVEF-PK--NIPTQRNGCDCGVFALMFADR----RGA-G-----------LAHWDFDQPHM----------------E------
	Arabidopsis_thaliana_OTS1       EYLTSPVMNFYMR-FLQ---QQ--ISSS--NQ----------------------ISADCHFFNTYFYKKL-------SDAVTYKGNDKDAFFVRFRRWW--KGI--DLFRK--------AYIFIPIHED-LHW--SL-----VIVCIPD---------------------------------------------------------------------------------------------------------------K------------------------------------------------KDES------------------------------G--LT-ILHLDSL---G-LHS-RKSIVENVKRFLKDE-WNYLNQDD--YSLDLPISEK-VWKNLPRRISE-AVV-QVPQQKNDFDCGPFVLFFIKRFI--EEA-P-----------QR---LKRKDL-GMFDK--K--WFRPDEASALRI
	Arabidopsis_thaliana_OTS2       EYLTSPVINFYIR-YVQ---HHVFSADKTAAN--------------------------CHFFNTFFYKKL-------TEAVSYKGNDRDAYFVKFRRWW--KGF--DLF-CK-------SYIFIPIHED-LHW--SL-----VIICIPD---------------------------------------------------------------------------------------------------------------K------------------------------------------------EDES------------------------------G--LT-IIHLDSL---G-LHP-RNLIFNNVKRFLREE-WNYLNQDA---PLDLPISAK-VWRDLPNMINE-AEV-QVPQQKNDFDCGLFLLFFIRRFI--EEA-P-----------QR---LTLQDL-KMIHK--K--WFK---------
	Arabidopsis_thaliana_ESD4       -WLNDEVINVYLE-LLK---ER--ETRE--PK----------------------KYLKCHYFNTFFYKKLV------SDS-GY-------NFKAVRRWTTQRKLGYALIDC--------DMIFVPIHRG-VHW--TL-----AVINN-----------------------------------------------------------------------------------------------------------------R------------------------------------------------ES------------------------------------K-LLYLDSL-N-G-VDP-M--ILNALAKYMGDE-ANEKSGKK--------IDAN-SW-----DMEF-VE--DLPQQKNGYDCGMFMLKYID-FF-SRGL-G-----------LC---FSQEHM-PYFRL--R--TAK--EI-----
	Arabidopsis_thaliana_ELS1       KWLNDEVINLYMV-LLK---ER--EARE--PK----------------------KFLKCHFFNTFFFTKLV------NSATGY-------NYGAVRRWTSMKRLGYHLKDC--------DKIFIPIHMN-IHW--TL-----AVINI-----------------------------------------------------------------------------------------------------------------K------------------------------------------------DQ------------------------------------K-FQYLDSF-K-G-REP-K--ILDALARYFVDE-VRDKSEVD--------LDVS-RW-----RQEF-VQ--DLPMQRNGFDCGMFMVKYID-FY-SRGL-D-----------LC---FTQEQM-PYFRA--R--TAK--EI-----
	Arabidopsis_thaliana_ELS2       QWLNDDVTNLYLE-LLK---ER--QTRD--PQ----------------------KYFKCHFFNTFFYVKLV------SGS-GY-------NYKAVSRWTTKRKLGYDLIDC--------DIIFVPIHID-IHW--TL-----GVINN-----------------------------------------------------------------------------------------------------------------R------------------------------------------------ER------------------------------------K-FVYLDSLFT-G-VGH-T--ILNAMAKYLVDE-VKQKSQKN--------IDVS-SW-----GMEY-VE--ERPQQQNGYDCGMFMLKYID-FY-SRGL-S-----------LQ---FSQKDM-PYFRL--R--TAK--EI-----
	Arabidopsis_thaliana_FUG1       ---------------VK--------TKQ--------------------------------IFS--------------------------------------KK-----------------YVFLPIVYW-SHW--TL-----LIFCNFGEDLD-----------------------------------------------------------------------------------------------------------S------------------------------------------------DKT-----------------------------------C-MLFLDSL-Q-T-TDS-SQRLEPDIRKFVLDI-YRAEGRTE---------DSS-----LVDEIPFYVP--MVPQQTNDVECGSFVLYYIHRFI--EDA-P-----------EN---FNVEDM-PYF-------------------
	Arabidopsis_thaliana_SPF1       -FVNDTIIDFYIN-YLK---NQI-QTEE--KH-------------------------RFHFFNSFFFRKLADL----DKDPSSIADGKA-AFLRVRKWT--RKV--DMFGK--------DYIFVPVNYN-LHW--SL-----IVICHPGEVAN-----------------------------------------------------------------------------------------------------------RTDL-------------------------------------------DLDDSK------------------------------KVP-C-ILHMDSI-K-G-SHA-G--LKNLVQTYLCEE-WKERHKET--------SDDI-SSRFM--NLRF-VSL-ELPQQENSFDCGLFLLHYLELFL--AEA-P-----------LN---FS---------------------------
	Arabidopsis_thaliana_SPF2       RFINDTIIDFYIK-YLK---NRI-SPKE--RG-------------------------RFHFFNCFFFRKLANLD---KGTPSTCGGRE--AYQRVQKWT--KNV--DLFEK--------DYIFIPINCS-FHW--SL-----VIICHPGELVP-----------------------------------------------------------------------------------------------------------S----------------------------------------------HVENPQ------------------------------RVP-C-ILHLDSI-K-G-SHKGG--LINIFPSYLREE-WKARHENT--------TNDS-SR---APNMQS-ISL-ELPQQENSFDCGLFLLHYLDLFV--AQA-P-----------AK---FN---------------------------
	Saccharomyces_cerevisiae_ULP1   RWLNDTIIEFFMK-YI----EK--ST----PN--------------------------TVAFNSFFYTNL-------SER-GY---------QGVRRWMKRKK---TQIDK-------LDKIFTPINLNQSHW--AL-----GIIDL-----------------------------------------------------------------------------------------------------------------K------------------------------------------------KK------------------------------------T-IGYVDSLSN-G-PNAMSFAILTDLQKYVMEE-SKHTIGED--------FDLI--------HL-------DCPQQPNGYDCGIYVC--MNTLYGSADA-P-----------LD---FDYKDA-IRMRR------FIAHLILT---
	Saccharomyces_cerevisiae_ULP2   DWVNDSILDFFTKFYIESSIEKSIIKRE-----------------------------QVHLMSSFFYTKLI------SNPADY--------YSNVKKWV--NNT--DLFSK--------KYVVIPINIS-YHWFSCIITNLDAILDFHQN--------------------------------------------------------------------------------------------------------------K------------------------------------------------DKNDAINS---------------------DEISINNPLVNILTFDSL-R-Q-THS-R--EIDPIKEFLISY-ALDKYSIQ--------LDKT-QI-----KMKT-CP---VPQQPNMSDCGVHVILNIRKFF---EN-PVETIDVWKNSKIKSKHFTAKMINKYFDKNER--NSA--R------
	Homo_sapiens_SENP1              NWLNDEIINFYMN-MLM---ER---SKE---K----------------------GLPSVHAFNTFFFTKL--------KTAGY---------QAVKRWT--KKV--DVFSV--------DILLVPIHLG-VHW--CL-----AVVDF-----------------------------------------------------------------------------------------------------------------R------------------------------------------------KK------------------------------------N-ITYYDSM-G-G-INN-E--ACRILLQYLKQE-SIDKKRKE--------FDTN-GW-----QLFS-KKSQEIPQQMNGSDCGMFACKYAD-CI-TKDR-P-----------IN---FTQQHM-PYFRK--RMVW----EILHRKL
	Homo_sapiens_SENP2              -WLNDEVINFYMN-LLV---ER--NKKQ--------------------------GYPALHVFSTFFYPKLK------SG--GY---------QAVKRWT--KGV--NLFEQ--------EIILVPIHRK-VHW--SL-----VVIDL-----------------------------------------------------------------------------------------------------------------R------------------------------------------------KK------------------------------------C-LKYLDSM-G-Q-KGH-R--ICEILLQYLQDE-SKTKRNSD--------LNLL-EW-----THHS-MKPHEIPQQLNGSDCGMFTCKYAD-YI-SRDK-P-----------IT---FTQHQM-PLFRK--KMVW----EILHQQL
	Homo_sapiens_SENP3              NWLNDQVMNMYGD-LVM---DT--V-----PE-------------------------KVHFFNSFFYDKLR------TK--GY-------D--GVKRWT--KNV--DIFNK--------ELLLIPIHLE-VHW--SL-----ISVDV-----------------------------------------------------------------------------------------------------------------R------------------------------------------------RR------------------------------------T-ITYFDSQ-R-T-LNR-R--CPKHIAKYLQAE-AVKKDRLD--------F-HQ-GW-----KGYF-KM--NVARQNNDSDCGAFVLQYCK-HL-ALSQ-P-----------FS---FTQQDM-PKLRR--Q--IYK--ELCHCKL
	Homo_sapiens_SENP5              NWLNDQVINMYGE-LIM---DA--V-----PD-------------------------KVHFFNSFFHRQLV------TK--GY---------NGVKRWT--KKV--DLFKK--------SLLLIPIHLE-VHW--SL-----ITVTL-----------------------------------------------------------------------------------------------------------------S------------------------------------------------NR------------------------------------I-ISFYDSQ---G-IHF-KF-CVENIRKYLLTE-AREKNRPE--------F-LQ-GW-----QTAV-TK--CIPQQKNDSDCGVFVLQYCK-CL-ALEQ-P-----------FQ---FSQEDM-PRVRK--R--IYK--ELCECRL
	Homo_sapiens_SENP6              EFLNDVIIDFYLK-YLV--LEK--LKKED-AD-------------------------RIHIFSSFFYKRLNQRERRNHETTNLSIQQK--RHGRVKTWT--RHV--DIFEK--------DFIFVPLNEA-AHW--FL-----AVVCFPGLEKPKYEPNPHYHENAVIQKCSTVEDSCISSSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNICSVKYSVKKINHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNYSDESPEAGKMLEDELVDFSEDQDNQDDSSDDGFLADDNCSSEIGQWHLKP-TICKQP-C-ILLMDSL-R-G-PSR-SN-VVKILREYLEVE-WEVKKGSK------RSFSKD--------VMKGSNP--KVPQQNNFSDCGVYVLQYVESFF---EN-P-----------I----LS-------F-------------------
	Homo_sapiens_SENP7              EFLNDVIIDFYLK-YLI--LEK--ASDE-LVE-------------------------RSHIFSSFFYKCLTRKENNLTEDNPNLSMAQR-RHKRVRTWT--RHI--NIFNK--------DYIFVPVNES-SHW--YL-----AVICFPWLEEAVYEDFPQ-----------TV---------------SQQSQAQ---------------------QSQND-----N--------KTI-----DN-DL------------RTTS-------TLS-------LS------------------------AEDSQS----------TESNMS--V------PKKMCKRP-C-ILILDSL-K-A-ASV-QN-TVQNLREYLEVE-WEVKLKTHRQ------FSKT-N------MVDL-CP--KVPKQDNSSDCGVYLLQYVESFF--KD--P-----------I----VN-------F-------------------
	Zea_mays_ESD4a                  EWLNDEAINLYLD-LLK---ER--ELRE--PC----------------------RFLKCHFFNTFFYKKLI------SS--GY-------DYKAVRRWTTKRKLGYSLIDC--------DKIFVPIHKE-VHW--CL-----AVINI-----------------------------------------------------------------------------------------------------------------R------------------------------------------------DK------------------------------------K-FQYLDSL-G-G-MDM-K--VLNVLAKYIVDE-VKDKSGQQ--------MDVL-SW-----KQEG-VK--NLPLQENGWDCGMFMLKYID-FY-SRDM-D-----------LI---FGQKQM-HYFRR--R--TAK--EI-----
	Zea_mays_ESD4b                  EWLNDEVINLYLD-LLK---ER--ELRE--PR----------------------KFLKCHFFNTFFYKKLI------SS--GY-------DYKAVRRWTTKRRLGYSLIDC--------DKIFVPIHKE-VHW--CL-----AVINI-----------------------------------------------------------------------------------------------------------------R------------------------------------------------DK------------------------------------K-FQYLDSL-G-G-MDT-R--VLRILAKYIVDE-VKDKSDQQ--------IDAL-SW-----KQES-VE--NLPLQENGWDCGMFMLKYID-FY-SRDM-D-----------LI---FGQKQM-HYFRR--R--TAK--EI-----
	Zea_mays_ESD4c                  -WLNDEVINLYLE-LLK---ER--EKRE--PN----------------------RFLKCHFFNTFFYKKLA------CGKNGY-------DYKSVKRWTSQRKLGYELIEC--------DKIFVPVHKD-VHW--CL-----AIINV-----------------------------------------------------------------------------------------------------------------K------------------------------------------------EN------------------------------------F-FQYLDSL-G-G-MDH-N--VPKVLARYISEE-VKDKSNRV--------INTS-LW-----HEEL-V---DIPLQRNGWDCGMFMLKYID-FH-SRGL-P-----------LS---FSQEHM-EYFRK--R--TAK--EI-----
	Zea_mays_ESD4d                  -WLNDEVINLYIE-LLK---ER--EKRE--PN----------------------RFLKCHFFNTFFYKRLT------CGIAGY-------DYQSVRRWTTFKRLGYGLVEC--------EKIFVPVHRN-AHW--CL-----ALINM-----------------------------------------------------------------------------------------------------------------K------------------------------------------------DK------------------------------------T-LQYLESLVGWG-RD-----VLDILARYIVDE-LKDKSNIE--------VEPS-SW-----TV---VSE-SLPLQQNGWDCGMFMLKYID-FH-SRGIKP------------S---FSQEHM-MYFRK--R--IAK--EI-----
	Zea_mays_OTS1a                  -FLSSQVINFYIK-YIK--MTR--LCDENFRD-------------------------KFYIFNTYFYGKL-------EEALRR-PR----DFPKLRRWS--KGV--NIFNN--------AYIILPIHGK-EHW--SL-----VIICLPP---------------------------------------------------------------------------------------------------------------K------------------------------------------------ERTS------------------------------SEPII-ILHLDSL---G-MHP-STKILNTVGRYLEKE-WRFLS-----------V----AWPCLLNDIRK-EAV-QVPQQNNAYDCGIFMLYYIEQFI--KKA-P-----------AR---FTTDKL-GMFNR--S--WFK---------
	Zea_mays_OTS1b                  -YLSSPVINFYIQ-YIK--RNR--LSSEDFRD-------------------------KFYIFNTYFYGKL-------EEALCR-QD----EFSKLRRWW--KGV--NILNK--------AYIILPIHGM-AHW--SL-----VIICIPA---------------------------------------------------------------------------------------------------------------K------------------------------------------------ESIS------------------------------G-P-I-ILHLDSL---A-MHP-STKILNTVERYLEKE-WCQLS----------------SWEDFKNNIHK-QSV-EVPRQNNEYDCGIFMLYYIERFI--KEA-P-----------ER---FTIDKL-DMFNR--S--WFK---------
	Zea_mays_OTS1c                  EYLKSPVINFYLQ-YLK-------KAR---PR----------------------R--DLHMFNTYFYSKL-------EEALSM-PGHHDSEFSKLRRWW--RGV--DIFKK--------AYIILPINES-MHW--SL-----IIVCMPT---------------------------------------------------------------------------------------------------------------K------------------------------------------------EADS------------------------------G-P-I-ILHLDSL---G-LHS-SQKLFDIVARYIQAERWHLGMDSS----YDIPFSGR-IWRRLSKNINR-EKI-EVPRQRNEYDCGLFMLYYIDRFI--QDA-P-----------ER---LTKEGL-GMFGR--R--WF----------
	Zea_mays_OTS1d                  --LSSPIMNFYIM-YLQGPMSS--IIRS--RG-------------------------EYHIFNTYFFSKLEAIATK-KDKITY--------FLKLRRWW--KGV--DIFQM--------AYILMPVHAE-THW--SL-----IIICMPT---------------------------------------------------------------------------------------------------------------K------------------------------------------------EDQI------------------------------G-P-I-ILHLDSL---K-FHS-SRWIFNVVSRFLKEE-WNYLNENI--SSKECPLRET-VWKNLPRKVEKKIV--EVPQQQNDYDCGLFVLYYMQRFI--QEA-P-----------ER---FRKKDY-SMFGK--R--WF----------
	Oryza_sativa_ELS1               EWLNDEVINLYLE-LLK---ER--ELRE--PN----------------------KFLKCHFFNTFFYKKLI------TG--GY-------DYKSVRRWTTKRKLGYSLLEC--------DKIFVPIHKE-VHW--CL-----AVINI-----------------------------------------------------------------------------------------------------------------R------------------------------------------------DK------------------------------------K-FQFLDSL---GSMDM-K--ALRTLARYLVDE-VKDKSGQH--------IDAL-SW-----KQEG-VK--NLPLQENGWDCGMFMLKYID-FY-SRDM-G-----------LT---FGQKHM-HYFRK--R--TAK--EI-----
	Oryza_sativa_ELS2               NWLNDEVINLYLE-LLK---ER--AQRE--PK----------------------RFLKCHFFNTFFYKKLA------CGKTGY-------DYQSVRRWTTLNRLGYGLVEC--------EKIFIPIHRN-VHW--CL-----AIINM-----------------------------------------------------------------------------------------------------------------K------------------------------------------------DK------------------------------------T-FQYLDSF-G-G-MDH-A--VLRILARYIRDE-LNDKSNIQ--------VDTS-SW------LKI-SSD-SCPLQQNGWDCGMFMLKFID-FH-SRGI-G-----------LC---FTQEHM-DYFRK--R--TAK--EI-----
	Oryza_sativa_SPF1               -FVNDTIIDFYVK-HLS---TRI-EPAE--KH-------------------------RYHFFNSFFFRKLADL----DKDQGRAPEGRA-AFLRVRKWT--RKI--NIFTK--------EFLFIPVNFN-LHW--SL-----IVICYPGEVETF----------------------------------------------------------------------------------------------------------K------------------------------------------------DGDT--------------------------NISAKIP-C-ILHMDSL-K-G-SHS-G--LKDIIQSYLWEE-WKERHPES-------ASDCSDKFL----NLRF-ISL-ELPQQDNSFDCGLFLLHYVELFL--MDT-P-----------RS---FNPLKI-DSFA---N--YLS--DD-----
	Oryza_sativa_OTS3               EYLKSPVINFYMQ-YLR--KSR--TCGD------------------------------LYIFNTYFYSKL-------EEVLSRMGDHDDSQFSKLRRWW--KHI--DIFRQ--------PYIILPIH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--D------------FLIAE-WQHLQNDS---SYTIPFSGR-IWNHLSKNINK-EKV-QVPSQRNKYDCGIFMLHYIERFI--QEA-P-----------ER---LTRENL-CMFGR--K--WFDPKETSGLR-
	Oryza_sativa_FUG1               -WLNDEVINLYLE-LLK---ER--EARE--PK----------------------RFLKCHFFNTFFYKKLA------CGKNGY-------DYKSVKRWTTRRRLGYELIEC--------DKIFVPVHKD-VHW--CL-----AVINM-----------------------------------------------------------------------------------------------------------------K------------------------------------------------ER------------------------------------T-FQYLDSL---GCVDH-H--VPRVLARYIAEE-VKDKSNKE--------IDTN-TW-----HEEL-VD--DIPLQQNGWDCGMFMLKYID-FH-SRGL-S-----------MS---FSQENM-EYFRK--R--TVM--EI-----

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1- 493;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1- 493;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1- 493;
END;

BEGIN TREES;
	Title 'Supplemental figure 2B_tree';
	ID 0170106e604b46;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Chlamydomonas_reinhardtii_SMT7,
[1] 		2 Arabidopsis_thaliana_OTS1,
[2] 		3 Arabidopsis_thaliana_OTS2,
[3] 		4 Arabidopsis_thaliana_ESD4,
[4] 		5 Arabidopsis_thaliana_ELS1,
[5] 		6 Arabidopsis_thaliana_ELS2,
[6] 		7 Arabidopsis_thaliana_FUG1,
[7] 		8 Arabidopsis_thaliana_SPF1,
[8] 		9 Arabidopsis_thaliana_SPF2,
[9] 		10 Saccharomyces_cerevisiae_ULP1,
[10] 		11 Saccharomyces_cerevisiae_ULP2,
[11] 		12 Homo_sapiens_SENP1,
[12] 		13 Homo_sapiens_SENP2,
[13] 		14 Homo_sapiens_SENP3,
[14] 		15 Homo_sapiens_SENP5,
[15] 		16 Homo_sapiens_SENP6,
[16] 		17 Homo_sapiens_SENP7,
[17] 		18 Zea_mays_ESD4a,
[18] 		19 Zea_mays_ESD4b,
[19] 		20 Zea_mays_ESD4c,
[20] 		21 Zea_mays_ESD4d,
[21] 		22 Zea_mays_OTS1a,
[22] 		23 Zea_mays_OTS1b,
[23] 		24 Zea_mays_OTS1c,
[24] 		25 Zea_mays_OTS1d,
[25] 		26 Oryza_sativa_ELS1,
[26] 		27 Oryza_sativa_ELS2,
[27] 		28 Oryza_sativa_SPF1,
[28] 		29 Oryza_sativa_OTS3,
[29] 		30 Oryza_sativa_FUG1;
	TREE 'Supplemental figure 2B_tree' = (((1:0.73247178,(6:0.14173932,(4:0.14146756,(5:0.25004819,(((18:0.02794021,19:0.00498865):0.0377142[%bootstrapFrequency = 0.766 ],26:0.04993961):0.0666736[%bootstrapFrequency = 0.742 ],((20:0.06808221,30:0.02981399):0.10846721[%bootstrapFrequency = 0.963 ],(21:0.09663477,27:0.09328951):0.07907242[%bootstrapFrequency = 0.877 ]):0.05688543[%bootstrapFrequency = 0.715 ]):0.05744156[%bootstrapFrequency = 0.484 ]):0.11638849[%bootstrapFrequency = 0.55 ]):0.01047724[%bootstrapFrequency = 0.166 ]):0.20106871[%bootstrapFrequency = 0.883 ]):0.13326557[%bootstrapFrequency = 0.535 ],(((14:0.267386,15:0.21302907):0.48884155[%bootstrapFrequency = 0.985 ],12:0.13793164):0.11614875[%bootstrapFrequency = 0.205 ],13:0.23647688):0.16979508[%bootstrapFrequency = 0.309 ]):0.19165311[%bootstrapFrequency = 0.587 ],10:0.52032096,(((((2:0.12715357,3:0.06940201):0.20056967[%bootstrapFrequency = 0.887 ],25:0.23387466):0.05128718[%bootstrapFrequency = 0.388 ],((22:0.14526188,23:0.05563065):0.15423248[%bootstrapFrequency = 0.966 ],(24:0.17656416,29:0.20109198):0.07380248[%bootstrapFrequency = 0.483 ]):0.1169887[%bootstrapFrequency = 0.873 ]):0.20071069[%bootstrapFrequency = 0.796 ],7:0.69931385):0.16365708[%bootstrapFrequency = 0.505 ],(((8:0.08345355,28:0.20790983):0.10208191[%bootstrapFrequency = 0.684 ],9:0.18036035):0.21359804[%bootstrapFrequency = 0.918 ],(11:0.72813109,(16:0.16967462,17:0.16937476):0.27941621[%bootstrapFrequency = 0.963 ]):0.22108744[%bootstrapFrequency = 0.486 ]):0.08748244[%bootstrapFrequency = 0.355 ]):0.24705661[%bootstrapFrequency = 0.562 ])[% ] [% ] [%  setBetweenDouble = bootstrapFrequency ];

END;


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			tell It;
				suppressEPCResponse;
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					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					setSelectedTaxonHighlightMode 1;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						setTaxonNameStyler  #mesquite.trees.NoColorForTaxon.NoColorForTaxon;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					togglePrintName off;
					showWindow;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					toggleShow consensusFrequency;
					toggleShow bootstrapFrequency;
					toggleShow posteriorProbability;
					toggleShow consensusFrequency;
					toggleShow posteriorProbability;
					toggleShow bootstrapFrequency;
					setDigits 4;
					setThreshold ?;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					toggleShowOnTerminals on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
					toggleShowOnTerminals on;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
		tell It;
			showDataWindow #3588849210124765557 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 496 400;
					setLocation 1185 58;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					colorCells  #mesquite.charMatrices.ColorByState.ColorByState;
				tell It;
					setStateLimit 9;
					toggleUniformMaximum on;
				endTell;
					colorRowNames  #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor;
					colorColumnNames  #mesquite.charMatrices.CharGroupColor.CharGroupColor;
					colorText  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleShowTaxonNames on;
					toggleTight off;
					toggleThinRows off;
					toggleShowChanges off;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleReduceCellBorders off;
					toggleAutoWCharNames off;
					toggleAutoTaxonNames off;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleShowPaleGrid off;
					toggleShowPaleCellColors off;
					toggleShowPaleExcluded off;
					togglePaleInapplicable on;
					togglePaleMissing off;
					toggleShowBoldCellText off;
					toggleAllowAutosize off;
					toggleColorsPanel off;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				showWindow;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				getEmployee #mesquite.charMatrices.AlterData.AlterData;
				tell It;
					toggleBySubmenus off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector;
				tell It;
					autotabOff;
				endTell;
				getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.align.AlignToDropped.AlignToDropped;
				tell It;
					gapCosts 16 6 1 1;
					subCosts  5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5;
				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;