#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=12; TAXLABELS Orientophila_subscopularis_SK692 Orientophila_loekoesii_SK690 Orientophila_loekoesii_SK721 Orientophila_sp_Thor25400 Orientophila_subscopularis_FrischJp99 Orientophila_sp_FrischJp171 'Athallia scopularis Schting_7521C' Orientophila_corticola_BDNA.L.0000118 'Flavoplaca microthallina Schting_7480C' Oxneriopsis_oxneri_SK695 Lazarenkoella_zoroasteriorum_SKA45 Lazarenkoella_zoroasteriorum_SKA51 ; END; BEGIN CHARACTERS; TITLE 'Orientophila Concatecation ITS + mtSSU sequences'; DIMENSIONS NCHAR=1431; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Orientophila_subscopularis_SK692 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCCAC--GGGGGGCTGCGC-----AACTCTTCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCACCAGAAGCTCAACCCA-TCCTGTTC-TCAGCGACGTCCGAGCACACATTCAAACTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGAGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCAA--TGATTG------------------------------------------CTTGGAGGAATGAATAGCAATTGCTATTTGCACCAAAATT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAATCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAGGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGA----------------------------------------------------------------------------------- Orientophila_loekoesii_SK690 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGGTACGCCAC--GGGGGGCTGCGC-----AACTCTTCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCAGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGTTC-TCAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGAGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCG?TCCGGCCGGAAAACAACGCAAACCTCAA--TGATTG------------------------------------------CTTGGAGGAATGAATAGCAATTGCTATTTGCACCAAAATT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAATCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAGGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGACCTAAATATTGTGGGCT------------------------------------------------------------------ Orientophila_loekoesii_SK721 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCCAC--GGGGGGCTGCGC-----AACTCTTCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGTTC-TCAGTGACGTCCGAGCACACATTCGAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGGAAAACAACGCAAACCTCAA--TGATTG------------------------------------------CTTGGAGGAATGAATAGCAATTGCTATTTGCACCAAAATT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAATCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAGGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGACCTAAATATTGTGGGCTA----------------------------------------------------------------- Orientophila_sp_Thor25400 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCGCGCCCCC-GGGGGGCTGCACCCCC-AACTCTTCATCCCTGTG-TCTACCCTCCTCTG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGCGCCTCGGCCCCGG--TCCT-GGCCGGTGAGT-CTC-CCAGAAGCCCAACCCA-CTCTGTAC-TCAGTAACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGCGAGACGTGCCCGCAAAATAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGTGGTCCGGCCGTGAAACAACGCAAACCTCAAA-TGA-------------------------------------------------------TGAATAGCAATTGCTATTTGCACCAAAATT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAAGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTAATTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGACCTAAATATTGTGGGCTATAGACGTGCTACATATGCCTTACAAAGGGATGCTAAATTGTGAAATAGAGCTAATCCCCTAAAAT Orientophila_subscopularis_FrischJp99 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTGCGCCCCC-AACTCTTCATCCCTGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGGGGTCGC-GGCCGGTGAGC-CTCGCCAGAAGCCCAACCCA-TTCTGTTC-TTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGCATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGACGTC---GCCTGCGGTCCGGCCGTAAAACAACACAAACTTCAA--TGA-------------------------------------------------------TGAATAGCAATTGCTATTTGCACCAAAATT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAAGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTTTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGACCTAAATATTGTGGGCTATAGACGTGCTACATATGCCTTACAAAGGGATGCTAAATTGTGAAATAGAGCTAATCCCCTAAAAT Orientophila_sp_FrischJp171 --------------CCGAAAGGGAGGCGCG-----GCTCCGGCCGGGCCTC--GAGGGGCCTCGCCCTG-AACCCTTCATCCCTGTG-TCTACCGTCCTCTG-TTGCTTTGGCGAGCGTCGGGGCG-----------TTCGAC---------------------GC-CTCGCCAGAAGCCCAACCTA-TTCTGTTT-TC-GTGGCGTCCGAGCACATATTGGAATTGAAGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCACCCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CCTCCCGGGGAGACGTGCCCGCAAACCAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CTGTTTCGCTTTCGAGGTGTC---GCCTGCGAACCGGCCGTAAAACCCCTCAAACTTCAA--TGA-------------------------------------------------------TGTATAGCAATTGCTATTTGCACCAAAGTT-TTTGGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTGGAGTTATGATAATGACATTATCTACTTATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGCAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCTAAAAGGTACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTAACATGGCACAGGTTAAGGCGAAAGCATCTTTTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTACTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATATCCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGACTTTGGTTAGTTCCATAAAATTAACGTAAACCCTTACTTTATTTTTAAATGAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTTATGACCTAAATATTGTGGGCTATAGACGTGCCACATATGCCTTACAAAGGGATGCTAAATTGTGAAATAGAGCTAATCCCCTAAAAT 'Athallia scopularis Schting_7521C' --------------CCGAGAGAGGGACG-G-----CCCACGGCTGCTCCCT--GGGGGGCCCCGCCCCCCGTCTCTTCAACCCTGTG-CGTATCAACCTCTG-TTGCCTCGGCGAGCGGCGGGGTGCTCC---GCGCCCCGGCCCCGG---TCTCGGCCGGTGAGTTCTCGTCCGAGGCCCAAGCCCATTCTGTTC-A-AGTGACGTCCGAGTCCACGATTAAATC-AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTCCGCGGCCCC--TCCCGGGGGGCGGCGCGCCCGTAAGTTAGTGGCGGCCCAGGGAGACTTCAAGCGCAGTAGA-ACCTTTCGCTTTCGAAGTGTC---GTCTGCGGCCCGGCCGTAAAACCCCCCATCTTTCAA--TGA-------------------------------------------------------TGTATAGCAATTGCTATTTGCACTAAAGGT-TTTAGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGATAGAATTATGATAATGACATTACCTATCCATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCCAAAAGGGACTAATTTGCTAGAGTTTTATATGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTGAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATGATGAATGTCATAGATTAGATTTAATTTGATCTGTAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAATCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGTGAGACTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCATCATGACCTAAATATTGTGGGCTATAGACGTGCCACATATGCCTTACAAAGGGATGCTAAATTGGAAATTGAGACTAATCCCCTAAAAT Orientophila_corticola_BDNA.L.0000118 ------------------------GGCGTG-----GCTCCGGTCACGCCTCGCGGGGGGCAGCGCCCCC-AACTCTTCAACCCCGTG-TCTACCACCCTCTG-TTGCTTCGGCGAGCGTCGGGGCGCCC---GGCGCCGCGGCCCCGG--CCATTGGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TTCTGTTT-TTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAACTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGCGGTCCGGCCGTAAAAGAACGCAAACCTCAA--TGATCGACCTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATACGTAAAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAACAAAGCCTCTAAAAGGGACTAGTTTGCTAGAGTTTTATGTGAAGGAGTTTTAAAGTACTACTGGTGTAGAGATGAAATTCAGTTATACCTTACATGGCACAGGTTAAGGCGAAAGCATCTTCTTATGTAAAAACTGACGTTAAAGGACGAAGGCTTTGTGTCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATTATGAATGTCATAGATTAGATTTAGTTTGATCTATAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAACCCGCAAAAAACCTTACCACAATTTGAATAGATATATTTTATCATACAAGTGTTGCATGGCTGTTTTTAGTTAATGTCGTGAGATTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTAAAATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCGTT--------------------------------------------------------------------------------------- 'Flavoplaca microthallina Schting_7480C' --------------CCGAGAGGGGGACGTGCGGTTGCTTGCGGCCCACGCCCCGGGGGGTTCCCCCTCT--ACTCTTTAACCCTATGCTTTACCAACCTCTG-TTGCTTCGGCGAGCGCCGGGGGG-CCTCGTGCGCCCCGGCCCCGG---CTTCGGTCGGTGAGTTCTCGCCGAAGACCCAATTTCAATCCGTTT-GCAGCCCCGTCCGAGCGCACCGATAAATCCAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTATGCTTGGTATTGGGCGTTCGCTTCCCC--GCTTCGGGGGTGGCGCGCCTGTAAATTAGTGGCGGCCTCGGGGGACCTCAAGCGTAGTAGAACCTTTTCGCTTGGAAGGTGCC---ACCCGGGGCCCGGCCGTCAACCTCTCTATCCATCAA--TGA-------------------------------------------------------TGTATAGCAATTGCTATTTGCACTAAAAGTCTTTAGTGT-AAAATCGACTTTGTCGAATAAAATTCTGGGTAGGATTATGATAATGACATTACCTGTCCATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTCCCAAAGGTACTAGTTTACTAGAGTTTTATATGAAGGAGTTTTAAAGTACTACTGGTGGAGAGATGAAATTCAGTCATACCTTACATGGCACAGATTAAGGTGAAAGCATCTTCTTATGTAAAAACTGACGTTGAAGGACGAAGGCTTTGTATCTCGAACAGGATTAGATACCCTAGTAGTCTAAGCAGAAAATCATGAATGTCATAGATTAGATCTAATTTGATCTGTAAATGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAATCCGCAAAAAACCTTACCACAATGTGAATAGATATATTTTATCATACAAGCGTTGCACGGCTGTTTTTAGTTAATGTCGTGAGACTTTGGTTAGTTCCATTAAATTAACGTAAACCCTTACTTTATTTTTATATAAAGTAGTTCACCGCTATATTGGATGTGATAATAGGGATCAAGACAAGTCATCATGACCTAAATATTGTGGGCTATAGACGTGCCACATATGCCTTACAAAGGGATGCTAAATTGGAAATTGAG-CTAATCCTCTAAAT- Oxneriopsis_oxneri_SK695 ---------------CGGAAGGATCATTAACGAGAGGGGGGGCCTTGAGCCCCCAGGGGCTCCATCCCCGTGCCTTTCCACCCTGTG-TTTACCTTCCATTG-TTGCTTTGGCGGGCCCCGGGGGTTTTTCCCCGGCGTAGGTCCCTTT-ACGGGGTCCGCGAAGTGCCCGTCAGAGGCCCATCTAAATTCCGTATATTAGTGAAATCTGAGTCTA--ATTAAAT--AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGAATTCCGGAGGGCATGCCTGTTCGAGCGTCATTAAACCCCTCAAGCTTGGCTTGGTATTGGGCGTTCGCTCCCCCGACTCCAGGGGGCGGCGTGCCCGAAATCCAGTGGCGGTCCAGGAAGACTTCAAGCGCAGTAAA-ACTTTTCGCTTTAGAAGCTTTTCAACCTGTGACTCGGCCAGTGAACCCTTCTATTTCAAGAATGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATACTTGGAGGAATGTATAGCAATAGCTAACTGCACTAAAATA-TTTAGTGT-AGAATCAACTATGTTGAATAAAATTCTGGGTGGTACTATGATAATGACATTACTTATTCATAAGTCTCGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAGGAGACAAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACTTAGACGGTAAATAAAGCCTAAAAAAGGGACTAATTTGCTAGAGTTTTATGTGAGAAAGTATTAAAGTACTGCTGGTGTAGAGATGAAATTCTGTAATACCTTGAATGGCACAGGTTACCGCGAAAGCATCTTTTTATGTAAAAACTGACGTTGAAGGACGAAGGCTTTGTGTCTCGAATAGGATTAGATACCCTAGTAGTCTAAGCAGACAATGATGAATGTCATAGGTTAGAAATATTTTGATCTATAAACGAAAGTGTAAGCATTCCACCTCAAGAGTAATTTGGCAACATTGGAACTGAAATCATTAGACCGTTTCTGAAACCAGTAGTGAAGTATGTTGTTTAATTTGATAATCCGCAAAAAACCTTACCATTCTTTGAATAGATATATTTTATCATACAAGCGTTGCACGGCTGTCTTCAGTTAATGTCGCGAGACTTTGGTTAGTTCCATAAAATTAACGTAAACCCTTACTTTATTTCATTATAAAGTAGCTCACCGCTATATAGGATGTGATAATAGGGATCAAGACAAGTCATCATGACCTGAATATTGTGGGCT------------------------------------------------------------------ Lazarenkoella_zoroasteriorum_SKA45 -----------------------ATGTGCGC----TTTACGGCCATGTCCCG-GGGGGTTTACGCCCCCATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTGCTTT---GCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGTCT-GTAGGGTCGTCTGAGTGTACCGATTAA---AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGT-CT---GCCTGTGGCCCTGCCATTAAAC-CCCCAATTTCCAA--TGATT-----------------------------------------------------TCAATGGTC-TAACGACTGACCCAGCAATTTGGAGGAATGAAAAACGAATAAGTCGTCTAAAGTTCTAGATAAAAAATTTATAATGATAATTTTTATCTATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACAAGTGTTATTCATCTTTAACAGGTTTAAAGGGTACCTAGACGGGAAATCAAGCC-ATAGTAGGGACTAATTTTCTAGAGTTTTATGTGT-GAAGTATCGAATTAT--CTGA-GTAGCAATAAAATGCCATGATAC---AGGTGAGACGGGTAACGGCGAAGGCAATCTTCTATGTAAAAACTGACGTTGAGGGACGAAG-CCCTGGGGAGCGATAAGGATTAGATACCCTAGTAGTCCAGGGAGAAAATTATGAGTGCCATAGACTAGGTAC----TAGTTTATAAATGAAAGTGTAAGCATTCCACCTCATGAGTAAAGCGGCAACGCCGAAATTGAAATCATTAGACCGTATCTGAAACCAGTAGTGAAGTATGCTATTTAATTCGATGGTCCGCGAATAACCTTACCACCTCTTGAATAATATTTTTTTTTCTTACAAGCGCTGCACGGCTGTCTTCAGTTAATATCGTGAGATTTTGGTTTGTTCCATTAA-TTAACGAAAACCCTTGTTTTATTTATATATAAAGCAGTTCACCGTTATATTGGATAAGATAAACGGGATCAAGACCAGTC------------------------------------------------------------------------------------------ Lazarenkoella_zoroasteriorum_SKA51 -----------------------ATGTGCGC----TTTACGGCCATGTCCCG-GGGGGTTTACGCCCCCATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTGCTTT---GCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGTCT-GTAGGGTCGTCTGAGTGTACCGATTAA---AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGT-CT---GCCTGTGGCCCTGCCATTAAAC-CCCCAATTTCCAA--TGATT-----------------------------------------------------TCAATGGTC-TAACGACTGAACCAGCAATTTGGAGGAATGAAAAACGAATAAGTCGTCTAAAGTTCTAGATAAAAAATTTATAATGATAATTTTTATCTATAAGTCTTGACCAAATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACAAGTGTTATTCATCTTTAACAGGTTTAAAGGGTACCTAGACGGGAAATCAAGCC-ATAGTAGGGACTAATTTTCTAGAGTTTTATGTGT-GAAGTATCGAATTAT--CTGA-GTAGCAATAAAATGCCATGATAC---AGGTGAGACGGGTAACGGCGAAGGCAATCTTCTATGTAAAAACTGACGTTGAGGGACGAAG-CCCTGGGGAGCGATAAGGATTAGATACCCTAGTAGTCC?GGGAGAAAATTATGAGTGCCATAGACTAGGTAC----TAGTTTATAAATGAAAGTGTAAGCATTCCACCTCATGAGTAAAGCGGCAACGCCGAAATTGAAATCATTAGACCGTATCTGAAACCAGTAGTGAAGTATGTTATTTAATTCGATGGTCCGCGAATAACCTTACCACCTCTTGAATAATATTTTTTTTTCTTACAAGCGCTGCACGGCTGTCTTCAGTTAATATCGTGAGATTTTGGTTTGTTCCATTAA-TTAACGAAAACCCTTGTTTTATTTATATATAAAGCAGTTCACCGTTATATTGGATAAGATAAACGGGATCAAGACAAGTCATCATGG----------------------------------------------------------------------------------- ; END; BEGIN TREES; Title 'Orientophila Concatenation ITS + mtSSU ML analysis'; LINK Taxa = Taxa; TRANSLATE [0] 1 Orientophila_subscopularis_SK692, [1] 2 Orientophila_loekoesii_SK690, [2] 3 Orientophila_loekoesii_SK721, [3] 4 Orientophila_sp_Thor25400, [4] 5 Orientophila_subscopularis_FrischJp99, [5] 6 Orientophila_sp_FrischJp171, [6] 7 'Athallia scopularis Schting_7521C', [7] 8 Orientophila_corticola_BDNA.L.0000118, [8] 9 'Flavoplaca microthallina Schting_7480C', [9] 10 Oxneriopsis_oxneri_SK695, [10] 11 Lazarenkoella_zoroasteriorum_SKA45, [11] 12 Lazarenkoella_zoroasteriorum_SKA51; TREE Imported_tree_0 = ((11:0.0015714024330636934,12:0.0009438862819739273):0.1422049861533181,(10:0.17663934129661762,((7:0.06398129862175342,9:0.06964171438029683):0.012482054042845607,(6:0.03491257746856374,(4:0.011450386403162545,(8:0.013589615029450445,(5:0.009199625642990204,(1:0.009074310034755067,(2:0.0032909202705152106,3:0.0007825818588109675):0.006708689513456803):0.0035747004511662156):0.0014536675196876628):0.0017989354298702143):0.01150817178553193):0.047078085484472676):0.013500697373486756):0.1422049861533181); END; BEGIN TREES; Title 'Orientophila Concatenation ITS + mtSSU Bayesian inference'; LINK Taxa = Taxa; TRANSLATE [0] 1 Orientophila_subscopularis_SK692, [1] 2 Orientophila_loekoesii_SK690, [2] 3 Orientophila_loekoesii_SK721, [3] 4 Orientophila_sp_Thor25400, [4] 5 Orientophila_subscopularis_FrischJp99, [5] 6 Orientophila_sp_FrischJp171, [6] 7 'Athallia scopularis Schting_7521C', [7] 8 Orientophila_corticola_BDNA.L.0000118, [8] 9 'Flavoplaca microthallina Schting_7480C', [9] 10 Oxneriopsis_oxneri_SK695, [10] 11 Lazarenkoella_zoroasteriorum_SKA45, [11] 12 Lazarenkoella_zoroasteriorum_SKA51; TREE TREE1 = ((11:0.0015136224477167448,12:0.0015136224477167448):0.193075269376379,((((8:0.014837595169350404,(4:0.012641457330076544,(((2:0.0020681704121899014,3:0.0020681704121899014):0.006025434585671341,1:0.008093604997861242):0.0028947136668390494,5:0.010988318664700292):0.0016531386653762525):0.0021961378392738595):0.014663590615734384,6:0.029501185785084788):0.041748433890051395,(9:0.05322167140257775,7:0.05322167140257775):0.018027948272558436):0.05235981240152737,10:0.12360943207666356):0.0709794597474322); END;