#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=22; TAXLABELS Athallia_scopularis_KC179340 Orientophila_loekoesii_KC179374 Orientophila_loekoesii_KJ133473 Orientophila_loekoesii_KJ133472 Orientophila_subscopularis_KC179375 Orientophila_subscopularis_KJ133476 Orientophila_subscopularis_KJ133475 Orientophila_subscopularis_KJ133474 Orientophila_subscopularis_LC490368 Orientophila_sp_KC179373 Orientophila_sp_KC179372 Orientophila_sp_LC490371 Orientophila_corticola_MN687909 Flavoplaca_microthallina_KC179368 Oxneriopsis_oxneri_KC179443 Oxneriopsis_oxneri_KY614430 Lazarenkoella_zoroasteriorum_KT456215 Lazarenkoella_zoroasteriorum_KT456216 Calogaya_zoroasteriorum_KY749090 Calogaya_zoroasteriorum_KY749091 Calogaya_zoroasteriorum_KY749092 Calogaya_zoroasteriorum_KY749105 ; END; BEGIN CHARACTERS; TITLE Orientophila_ITS_sequences; DIMENSIONS NCHAR=610; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Athallia_scopularis_KC179340 --------------CCGAGAGAGGGACG-G-----CCCACGGCTGCTCCC--TGGGGGGCCC-CGCCCCCCGTCTCT-TCAACCCTGTG-CGTATCAACCTCTG-TTGCCTCGGCGAGCGGCGGGGTGCTCC---GCGCCCCGGCCCCGG--TCTC-GGCCGGTGAGTTCTCGTCCGAGGCCCAAGCCCATTCTGT-TCA-AGTGACGTCCGAGTCCACGATTAAATC-AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTCCGCGGCCCC--TCCCGGGGGGCGGCGCGCCCGTAAGTTAGTGGCGGCCCAGGGAGACTTCAAGCGCAGTAGA-ACCTTTCGCTTTCGAAGTGTC---GTCTGCGGCCCGGCCGTAAAACCCCCCATCTTTCAA-TGA------------------------------------------------- Orientophila_loekoesii_KC179374 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGRTGTC---GCCTGCGGTCCGGCCGGAAAACAACGCAAACCTCAA-TGA------------------------------------------------- Orientophila_loekoesii_KJ133473 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCGAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGGAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_loekoesii_KJ133472 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGGTACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCCTCCTCCG-TTGCTTCGGCGAGCGTCAGGGCG-CCTGGAGTGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCAATTCTGT-TCTCAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CTGGGGGAGACGTGCCCGCAAATTAGTGGAGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCG?TCCGGCCGGAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_subscopularis_KC179375 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGGGGTCGC-GGCCGGTGAGC-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGCATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGACGTC---GCCTGCGGTCCGGCCGTAAAACAACACAAACTTCAA-TGA------------------------------------------------- Orientophila_subscopularis_KJ133476 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAACTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGAGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCAA-TGA------------------------------------------------- Orientophila_subscopularis_KJ133475 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCACCAGAAGCTCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAACTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGAGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCAA-TGATTG---------------------------------------------- Orientophila_subscopularis_KJ133474 CGGAAGGATCATTACCGAGAGGAAGGCGTG-----GCTC-GGTCACGCC--ACGGGGGGCTG-CGC-----AACTCT-TCATCC-TGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGGGGTCGC-GGCCGGTGAGC-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCCCAAGCTCTGCTTGGCATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTCTGGAGACGTC---GCCTGCGGTCCGGCCGTAAAACAACACAAACTTCAA-TGATTG---------------------------------------------- Orientophila_subscopularis_LC490368 ----------------------AAGGCGTG-----GCTCCGGTCACGCCCCACGGGGGGCTG-CGCCCCC-AACTCT-TCATCCCTGTG-TCTACCATCCCCTG-TTGCTTCGGCGAGCGTCGGGGCGTCCTCGGGCGCCTCGGCCCCGG--TCAT-GGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TCCTGT-TCTCAGCGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGGGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGAGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAAACAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCAATCGCTTTGGAGGTGTC---GCCTGCGGTCCGGCCGTAAAACAACGCAAACCTCGA-TGATTGACCTCGGATCAGGCAGGGATACCCGCTGAACTTAA----------- Orientophila_sp_KC179373 --------------CCGAGAGGAAGGCGTG-----GCTCCGGTCGCGCCC-CCGGGGGGCTG-CACCCCC-AACTCT-TCATCCCTGTG-TCTACCCTCCTCTG-TTGCTTCGGCGAGCGTCGGGGCG-CCTGGAGCGCCTCGGCCCCGG--TCCT-GGCCGGTGAGT-CTC-CCAGAAGCCCAACCCA-CTCTGT-ACTCAGTAACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATGCCTGTCCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGCGAGACGTGCCCGCAAAATAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGTGGTCCGGCCGTGAAACAACGCAAACCTCAAATGA------------------------------------------------- Orientophila_sp_KC179372 --------------CCGAAAGGGAGGCGCG-----GCTCCGGCCGGGCCT--CGAGGGGCCT-CGCCCTG-AACCCT-TCATCCCTGTG-TCTACCGTCCTCTG-TTGCTTTGGCGAGCGTCGGGGCG-----------TTCGAC---------------------GC-CTCGCCAGAAGCCCAACCTA-TTCTGT-TTTC-GTGGCGTCCGAGCACATATTGGAATTGAAGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCACCCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CCTCCCGGGGAGACGTGCCCGCAAACCAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CTGTTTCGCTTTCGAGGTGTC---GCCTGCGAACCGGCCGTAAAACCCCTCAAACTTCAA-TGA------------------------------------------------- Orientophila_sp_LC490371 ----------------------GGGGCCTG-----GTTCCGGCCACGCCTCGCGGGGCTC---CGCCCCG-AACTCT-TCAACCCCGTG-TCTACCGTTCTCTG-TTGCTTCGGCGAGCGTCGGGGCGTCT---GGCGCCTCGGCCTCGG--TCAC-GGCCGATGAGT-CTCGCCAGAAGCCCAACCCA-TTCTGT-TCTTAGTGGCGTCCGAGCACATATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTACTGGGCGCTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAATCAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTCGGAGATGTC---GCCTGCGATCCGGCCGTAAAACCCCACAAACTTCAA-TGATTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA----------- Orientophila_corticola_MN687909 ------------------------GGCGTG-----GCTCCGGTCACGCCTCGCGGGGGGCAG-CGCCCCC-AACTCT-TCAACCCCGTG-TCTACCACCCTCTG-TTGCTTCGGCGAGCGTCGGGGCGCCC---GGCGCCGCGGCCCCGG--CCATTGGCCGGTGAGT-CTCGCCAGAAGCCCAACCCA-TTCTGT-TTTTAGTGACGTCCGAGCACACATTCAAATTGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTCTGCTTGGTATTGGGCGTTCGC---CTC--CC-CCGGGGGAGACGTGCCCGCAAACTAGTGGCGGTCCAGGGAGATCTCAAGCGCAGTAGA-CCCTATCGCTTTGGAGATGTC---GCCTGCGGTCCGGCCGTAAAAGAACGCAAACCTCAA-TGATCGACCTCG---------------------------------------- Flavoplaca_microthallina_KC179368 --------------CCGAGAGGGGGACGTGCGGTTGCTTGCGGCCCACGCCCCGGGGGGTTC-CCCCTCT--ACTCT-TTAACCCTATGCTTTACCAACCTCTG-TTGCTTCGGCGAGCGCCGGGGGG-CCTCGTGCGCCCCGGCCCCGG---CTTCGGTCGGTGAGTTCTCGCCGAAGACCCAATTTCAATCCGT-TTGCAGCCCCGTCCGAGCGCACCGATAAATCCAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTATGCTTGGTATTGGGCGTTCGCTTCCCC--GCTTCGGGGGTGGCGCGCCTGTAAATTAGTGGCGGCCTCGGGGGACCTCAAGCGTAGTAGAACCTTTTCGCTTGGAAGGTGCC---ACCCGGGGCCCGGCCGTCAACCTCTCTATCCATCAA-TGA------------------------------------------------- Oxneriopsis_oxneri_KC179443 -----------------------------ACGAGAGGGGGGGCCTTGAGCCCCCAGGGGCTC-CCTCCCCGTACCTT-TCCACCCTGTG-TTTACCTTCCATTG-TTGCTTTGGCGGGCCCCGGGGGTTTTTCCCCGGCGTAGGTCCCTTTACGGGGTCCCGCGAAGTGCCCGTCAGAGGCCCATCTAAATTCCGTATATTAGTGAAATCTGAGTCTA--ATTAAAT--AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGAATTCCGGAGGGCATGCCTGTTCGAGCGTCATTAAACCCCTCAAGCTTGGCTTGGTATTGGGCGTTCGCTCCCCCGACTCCAGGGGGCGGCGTGCCCGAAATCCAGTGGCGGTCCAGGAAGACTTCAAGCGCAGTAAA-ACTTTTCGCTTTAGAAGCTTTTCAACCTGTGACTCGGCCAGTGAACCCTTCTATTTTCAA--GAA------------------------------------------------ Oxneriopsis_oxneri_KY614430 ---------------CGGAAGGATCATTAACGAGAGGGGGGGCCTTGAGCCCCCAGGGGCTC-CATCCCCGTGCCTT-TCCACCCTGTG-TTTACCTTCCATTG-TTGCTTTGGCGGGCCCCGGGGGTTTTTCCCCGGCGTAGGTCCCTTTACGGGGTCC-GCGAAGTGCCCGTCAGAGGCCCATCTAAATTCCGTATATTAGTGAAATCTGAGTCTA--ATTAAAT--AATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGAATTCCGGAGGGCATGCCTGTTCGAGCGTCATTAAACCCCTCAAGCTTGGCTTGGTATTGGGCGTTCGCTCCCCCGACTCCAGGGGGCGGCGTGCCCGAAATCCAGTGGCGGTCCAGGAAGACTTCAAGCGCAGTAAA-ACTTTTCGCTTTAGAAGCTTTTCAACCTGTGACTCGGCCAGTGAACCCTTCTATTT-CAA--GAATGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATA Lazarenkoella_zoroasteriorum_KT456215 -----------------------ATGTGCGC----TTTACGGCCATGTCC--CGGGGGGTTTACGCCCCC-ATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTG-C--TTTGCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGT-CTGTAGGGTCGTCTGAGTGTACCGATTAA--AA-ACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGTCT----GCCTGTGGCCCTGCCATTAAACCCC-CAATTTCCAA-TGATT----------------------------------------------- Lazarenkoella_zoroasteriorum_KT456216 -----------------------ATGTGCGC----TTTACGGCCATGTCC--CGGGGGGTTTACGCCCCC-ATCATTATCAACCCT-TG-CCTATCTACCTCTGATTGCTTCGGCGAGCGCCCGGGTG-C--TTTGCGCCCGGGCCCCGG---CTTCAG?CGGTGCGCTCTCGCCGGAGGC-CATCTTAAATCTGT-CTGTAGGGTCGTCTGAGTGTACCGATTAA--AA-ACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTCCTCGGGGATGCGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGACGTCT----GCCTGTGGCCCTGCCATTAAACCCC-CAATTTCCAA-TGATT----------------------------------------------- Calogaya_zoroasteriorum_KY749090 --------------CCGAGAGGGATATGCGC----CTCACGGCCATGTCC--CGGGGGGTTC-CGCCCCC-GTCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGATGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCCCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749091 --------------CCGAGAGGGATATGCGC----CTCACGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TAAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGAGATGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCCCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749092 --------------CCGAGAGGGATACGCGC----CTCGCGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATT-GCGCCCGGGCCCCGG---CTTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGACGTCTGAGTGTACCGATTAA--AA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGCGTCCCC--GTTCTCGGGGATGTGTGCCCGTAAATCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- Calogaya_zoroasteriorum_KY749105 --------------CCGAGAGGGATATGCGC----CTCGCGGCCATGTCC--CGGGGGGTTC-CGCCCCC-ATCTCT-TCAACCCT-TG-CCTATCTACCTCTG-TTGCTTCGGCGAGCGCTCGGGTG-CCATTTGCGCCCGGGCCCCGG---CCTCGGTCGGTGCGCTCTCGCCGGAGGC-CATATTGAATCTGT-CTGTAGTGACGTCTGAGTGTACCGATTAA--AAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCTTTGCTTGGTCTTGGGCGTTCGTGTCCCC--GTTTCCGGGGATATGTGCCCGTAAACCAGTGGCGGTCCAGGGAGACTTCAAGCGCAGTAGTATCTATCCGCTTCAGAGGTCTC---GCCTGTGGCCCGGCCATCAAACCCC-CAATTTCCAA-TGA------------------------------------------------- ; END; BEGIN TREES; Title Orientophila_ITS_ML_analysis; LINK Taxa = Taxa; TRANSLATE [0] 1 Athallia_scopularis_KC179340, [1] 2 Orientophila_loekoesii_KC179374, [2] 3 Orientophila_loekoesii_KJ133473, [3] 4 Orientophila_loekoesii_KJ133472, [4] 5 Orientophila_subscopularis_KC179375, [5] 6 Orientophila_subscopularis_KJ133476, [6] 7 Orientophila_subscopularis_KJ133475, [7] 8 Orientophila_subscopularis_KJ133474, [8] 9 Orientophila_subscopularis_LC490368, [9] 10 Orientophila_sp_KC179373, [10] 11 Orientophila_sp_KC179372, [11] 12 Orientophila_sp_LC490371, [12] 13 Orientophila_corticola_MN687909, [13] 14 Flavoplaca_microthallina_KC179368, [14] 15 Oxneriopsis_oxneri_KC179443, [15] 16 Oxneriopsis_oxneri_KY614430, [16] 17 Lazarenkoella_zoroasteriorum_KT456215, [17] 18 Lazarenkoella_zoroasteriorum_KT456216, [18] 19 Calogaya_zoroasteriorum_KY749090, [19] 20 Calogaya_zoroasteriorum_KY749091, [20] 21 Calogaya_zoroasteriorum_KY749092, [21] 22 Calogaya_zoroasteriorum_KY749105; TREE Imported_tree_0 = ((15:0.0018819258644490664,16:0.0017971537749880363):0.18989064160848876,(1:0.20186586782121635,((14:0.15437489712881738,((17:0.00000100000050002909,18:0.00000100000050002909):0.030963489543097963,(21:0.0017761479617996404,(22:0.00795250360792443,(19:0.0018619318434071948,20:0.003778454287269739):0.0034149481870997087):0.004183069426618816):0.010318137483121983):0.11504494622028058):0.03291112269530542,((11:0.07199612146067984,12:0.027968846825026764):0.01717290777988992,(13:0.021663731561010736,((5:0.00000100000050002909,8:0.0037917516513532672):0.01665065973962388,((9:0.0019270289960992173,(6:0.00000100000050002909,7:0.0038271528990130163):0.0038453559113883398):0.013997168132579698,(10:0.027726906686493746,(2:0.00000100000050002909,(3:0.001910162045326805,4:0.007785113206990807):0.00000100000050002909):0.008800419684006681):0.008591256332786816):0.002722390630473332):0.009740821626473451):0.012211196943694646):0.08190989471432741):0.0012326114399263178):0.18989064160848876); END; BEGIN TREES; Title Orientophila_ITS_Bayesian_inference; LINK Taxa = Taxa; TRANSLATE [0] 1 Athallia_scopularis_KC179340, [1] 2 Orientophila_loekoesii_KC179374, [2] 3 Orientophila_loekoesii_KJ133473, [3] 4 Orientophila_loekoesii_KJ133472, [4] 5 Orientophila_subscopularis_KC179375, [5] 6 Orientophila_subscopularis_KJ133476, [6] 7 Orientophila_subscopularis_KJ133475, [7] 8 Orientophila_subscopularis_KJ133474, [8] 9 Orientophila_subscopularis_LC490368, [9] 10 Orientophila_sp_KC179373, [10] 11 Orientophila_sp_KC179372, [11] 12 Orientophila_sp_LC490371, [12] 13 Orientophila_corticola_MN687909, [13] 14 Flavoplaca_microthallina_KC179368, [14] 15 Oxneriopsis_oxneri_KC179443, [15] 16 Oxneriopsis_oxneri_KY614430, [16] 17 Lazarenkoella_zoroasteriorum_KT456215, [17] 18 Lazarenkoella_zoroasteriorum_KT456216, [18] 19 Calogaya_zoroasteriorum_KY749090, [19] 20 Calogaya_zoroasteriorum_KY749091, [20] 21 Calogaya_zoroasteriorum_KY749092, [21] 22 Calogaya_zoroasteriorum_KY749105; TREE TREE1 = ((16:0.00230655729265436,15:0.00230655729265436):0.260131482510419,(((((19:0.00307339816370103,20:0.00307339816370103):0.003140179545734645,22:0.006213577709435675):0.0025639486682761947,21:0.00877752637771187):0.016753798936694514,(17:0.0005595014456100944,18:0.0005595014456100944):0.02497182386879629):0.12704248516677344,(((11:0.05604354932611169,((((10:0.015789519361495002,((2:0.0019843699165822265,3:0.0019843699165822265):0.002581466010615388,4:0.0045658359271976146):0.011223683434297388):0.007124974202833367,((5:0.002281473031072706,8:0.002281473031072706):0.01677030906805166,((7:0.0017271270391809451,6:0.0017271270391809451):0.003087108812488956,9:0.004814235851669901):0.014237546247454463):0.003862711465204005):0.007433542185765252,13:0.03034803575009362):0.015575384110938173,12:0.045923419861031795):0.010120129465079897):0.06402984543741792,1:0.12007339476352961):0.014714170247843203,14:0.13478756501137282):0.017786245469807005):0.10986422932189355); END;