#NEXUS [written Fri Feb 14 17:40:40 EST 2020 by Mesquite version 3.6 (build 917) at Angies-Mac.local/157.182.250.48] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=12; TAXLABELS Massospora_cicadina_MC17 Massospora_cicadina_GK2 Massospora_cicadina_MC7 Massospora_cicadina_MICH231384 Massospora_levispora_ML2 Massospora_platypediae_NM4 Massospora_tettigatis_PL373 Massospora_tettigatis_PL5042 Massospora_diceroproctae_DB138 Massospora_diceroproctae_DB176 Massospora_diceroproctae_DB128 Entomophthora_muscae_ARSEF3074 ; END; BEGIN CHARACTERS; TITLE Massospora_BTUB_Alignment; DIMENSIONS NCHAR=865; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Massospora_cicadina_MC17 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCATGTTCTTGGCATCAAACATCTGAGCGGTTAGCTCAGGCACCGTCAGAGACTGGTACTGCTTCGAGTCCTTGGCCGTCAGAGGAGCAAATCCAACCATGAAGAAATGAAGCCGGGGGAACGGAATCAAGTTGACAGCCAGCTTACGAAGATCGGCATTCAGCTGACCAGGGAAGCGAAGGGAGGTGGTGACTCCCGACATGACCTGGGAGACGAGATGGTTAAGGTCTCCATAGCTGGGGTTGTTGAGCTTCAGGGTGCGGAAGCAGATGTCATAAAGGGCCTCGTTATCGATACAGAAGGTCTCATCAGCATTCTCAACAAGGTGATGAACGGTAAGAGTAGCGTTGTAGGGGCTCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Massospora_cicadina_GK2 -----------------------GCTCATCTTTAAGCCGGAGGGGGGAATGTTACAAACGCTCGTCTTGATGTTGTGGGGAATCCATTCGACAAAGTAGCTGGAGTTCTTCTTGTGAATGTCCACCATCTGCTGCTCAACTTCCTTCATCGACAGGCGGCCGCGGAAGAAGGCGGCAACGGTCAAGTAGCGGCCGTGGCGAGGATCAGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGAGCGGTTAGCTCAGGCACCGTCAGAGACTGGTATTGCTTCGAGTCCTTGGCCGTCAAAGGAGCAAATCCAACCATGAAGAAATGGAGCCGGGGGAACGGAATCAAATTGACAGCCAGCTTACGAAGATCGGCATTCAGCTGACCAGGGAAGCGAAGTGAAGTGGTTACTCCCGACATGACCTGGGAGACGAGATGGTTAAAGTCTCCATAGCTGGGGTTGGTGAGCTTCAAGGTGCGGAACGAGATGTCATAAAGAGCCTCGTTATCGATACAGAAGGTCTCGTCAGCATTCTCAACAAGGTGATGAACGGTAAGGGTAGCGTTGTAGGGCTCAACAACTGTGTCGGACACCTTGGGGGAGGGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Massospora_cicadina_MC7 ----------------------------------------------------------CGCTCGTCTTGATGTTGTGGGGAATCCATTCGACAAAGTAGCTGGAGTTCTTCTTGTGAATGTCCACCATCTGCTGCTCAACTTCCTTCATCGACAGGCGGCCGCGGAAGAAGGCGGCGACGGTCAAGTAGCGGCCGTGGCGAGGATCAGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGAGCGGTTAGCTCAGGCACCGTCAGAGACTGGTACTGCTTCGAGTCCTTGGCCGTCAGAGGAGCAAATCCAACCATGAAGAAATGAAGCCGGGGGAACGGAATCAAGTTGACAGCCAGCTTACGAAGATCGGCATTCAGCTGACCAGGGAAGCGAAGGGAGGTGGTGACTCCCGACATGACCTGGGAGACGAGATGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Massospora_cicadina_MICH231384 GTGTTGTTCCCGATAAAGGTGGCGCTCATCTTCAGCCCGGAAGGCGGGATGTTGCACACGCTCGTCTTGATGTTGTGGGGGATCCACTCGACAAAGTAGCTGGCGTTCTTCTTGTGGACGTCCACCATCTGCTGCTCAACCTCCTTCATCGACAACCGGCCGCGGAAGAAGGCGGCGACGGTCAAGTAGCGGCCGTGGCGAGGGTCGGAGGCGGCCATCATGTTCTTGGCATCAAACATCTGGGCGGTTAGCTCAGGCACCGTCAGCGACTGGTACTGCTTCGAGTCCTTCGCCGTCAGAGGAGCGAATCCAACCATGAAGAAATGAAGCCGGGGGAACGGGATCAAGTTGACAGCCAGCTTACGGAGATCGGCATTCAGCTGGCCAGGGAAGCGAAGGGAGGTGGTGACTCCCGACATGACCTGGGAGACGAGATGGTTGAGGTCACCGTAGCTGGGGTTGTTGAGCTTCAAGGTGCGGAAGCAGATGTCATAAAGGGCCTCGTTATCGATACAGAAGGTCTCATCAGCATTCTCAACAAGGTGATGGACGGTAAGGGTAGCGTTGTAGGGCTCGACGACGGTGTCGGACACCTTGGGGGAGGGAACCACCGAAAAGGTGCACATCATACGATCAGGGAACTCCTCACGGATTTTAGAGATGAGAAGAGATCCGAGACCAGAACCGGTACCGCCCCCCAGGGAGTGAGCGACCTGGAAACCCTGGAGAGAGTCGCAGTTCTCGGTCTCCTTGCGGACGATTTCAAGGATGTTATCGACGAGCTCGGCGCCTTCGGTGTAATAACCCTTGGCCCAGTTGTTGCCGGCGCCGGACTGCCCGTAAAGGAAGTTGTCGGGGCGGTACA Massospora_levispora_ML2 ---TTGTTACCAATGAAAGTGGCACTCATCTTCAAGCCAGAAGGAGGGATGTTACATACGCTCGTCTTGATGTTGTGGGGAATCCATTCAACAAAGTAGTTGGAATTCTTCTTGTGAATGTCAACCATCTGCTGCTCAACCTCTTTCATTGACAGACGACCACGGAAGAAGGCTGCAACGGTTAAGTAGCGACCGTGACGAGGATCAGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGGGCAGTCAGCTCAGGAACAGTCAGAGACTGGTATTGCTTTGAGTCCTTGGCCGTCAGAGGAGCAAAGCCAACCATGAAGAAATGGAGACGAGGGAAGGGAATCAAGTTGACGGCCAGCTTACGGAGATCAGCATTCAGTTGGCCAGGGAAACGAAGGGAGGTGGTGACTCCAGACATGACCTGGGAGACGAGATGGTTAAGATCTCCGTAGCTAGGGTTGTTAAGCTTCAAGGTGCGGAAGCAGATGTCGTAAAGGGCCTCATTATCGATACAGAAGGTCTCGTCAGCGTTCTCAACAAGGTGATGAACGGTAAGAGTGGCGTTGTAGGGCTCAACAACGGTGTCGGACACTTTGGGAGAGGGCACAACTGAGAAGGTGCACATCATACGATCAGGGAACTCCTCACGGATTTTGGAGATGAGAAGAGATCCAAGACCGGAACCGGTACCACCGCCTAAGGAGTGAGCGACTTGGAAGCCTTGGAGAGAGTCGCAGTTCTCGGTCTCCTTACGGACAATTTCGAGAATGCTATCAACGAGCTCAGCGCCTTCGGTATAATAACCCTTGGCCCAATTGTTACCAGCACCAGACTGTCCGTAAACAAAGTTATCAGGACGGTACA Massospora_platypediae_NM4 GTGTTGTTACCAATGAAAGTGGCACTCATCTTCAAGCCAGAAGGAGGGATGTTACATACGCTCGTCTTGATGTTGTGGGGAATCCATTCAACAAAGTAGTTGGCATTCTTCTTGTGAATGTCAACCATCTGCTGCTCAACCTCTTTCATTGACAGACGACCACGGAAGAAGGCTGCAACGGTTAAGTAGCGACCGTGACGAGGATCAGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGGGCAGTCAGCTCAGGAACAGTCAGAGACTGGTATTGCTTTGAGTCCTTGGCCGTCAGAGGAGCAAAGCCAACCATGAAGAAATGGAGACGAGGGAAGGGAATCAAGTTGACGGCCAGCTTACGGAGATCAGCATTCAGTTGGCCAGGGAAACGAAGGGAGGTGGTGACTCCAGACATGACCTGGGAGACGAGATGGTTAAGATCTCCGTAGCTAGGGTTGTTAAGCTTCAAGGTGCGGAAGCAGATGTCGTAAAGGGCCTCATTATCGATACAGAAGGTCTCGTCAGCGTTCTCAACAAGGTGATGAACGGTAAGAGTGGCGTTGTAGGGCTCAACAACGGTGTCGGACACTTTGGGAGAGGGCACAACTGAGAAGGTGCACATCATACGATCAGGGAACTCCTCACGGATTTTGGAGATGAGAAGAGATCCAAGACCGGAACCGGTACCACCGCCTAAGGAGTGAGCGACTTGGAAGCCTTGGAGAGAGTCGCAGTTCTCGGTCTCCTTACGGACAATTTCGAGAATGCTATCAACGAGCTCAGCGCCTTCGGTATAATAACCCTTGGCCCAATTGTTACCAGCACCAGACTGTCCGTAAACAAAGTTATCGGGACGGTACA Massospora_tettigatis_PL373 -----------------------------------------------------------------------------------------------------------------------------------CTGCTCAACCTCTTTCATTGAGAGACGACCACGGAAGAAAGCGGCAACGGTCAAGTAGCGGCCGTGACGAGGATCCGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGAGCAGTCAGCTCAGGAACCGTCAGAGATTGGTACTGCTTTGAATCCTTAGCCGTAAGCGGGGCGAATCCAACCATGAAGAAATGAAGACGAGGGAAGGGAATCAAGTTGACGGCCAACTTGCGGAGATCAGCATTCAGCTGACCAGGGAAACGGAGGGAGGTTGTGACTCCAGACATGACCTGGGAGACGAGATGGTTAAGATCACCGTAGCTGGGGTTGTTAAGCTTCAGAGTGCGGAAGCAGATGTCATAAAGAGCTTCGTTATCAATACAGAAGGTCTCGTCAGCGTTCTCAACAAGGTGATGAACGGTAAGGGTGGCGTTGTAGGGCTCGACAACGGTATCCGACACCTTGGGAGAGGGTACAACTGAGAAGGTACACATCATACGATCAGGAAACTCCTCACGAATCTTGGAGATGAGAAGAGATCCGAGACCGGAGCCAGTACCACCACCCAAGGAGTGAGCGACTTGGAAGCCTTGGAGAGAGTCGCAGGTCTCGGTCTCCTTGCGGACAATTTCGAGAATGCTATCAACCAGCTCAGCGCCTTCGGTATAATAACCCTTGGCCCAGTTGTTACCGGCACCCGACTGCCCGTAAACAAAGTTGTCGGGACGGTACA Massospora_tettigatis_PL5042 GTGTTGTTACCAATAAAAGTGGCGCTCATCTTTAATCCAGAAGGAGGGATGTTACACACGCTCGTCTTGATGTTGTGGGGAATCCATTCAACAAAGTAGTTCGAGTTCTTCTTGTGGATGTCGACCATCTGCTGCTCAACCTCTTTCATTGAGAGACGACCACGGAAGAAAGCGGCAACGGTCAAGTAGCGGCCGTGACGAGGATCCGAGGCAGCCATCATGTTCTTGGCATCAAACATCTGAGCAGTCAGCTCAGGAACCGTCAGAGATTGGTACTGCTTTGAATCCTTAGCCGTAAGCGGGGCGAATCCAACCATGAAGAAATGAAGACGAGGGAAGGGAATCAAGTTGACGGCCAACTTGCGGAGATCAGCATTCAGCTGACCAGGGAAACGGAGGGAGGTTGTGACTCCAGACATGACCTGGGAGACGAGATGGTTAAGATCACCGTAGCTGGGGTTGTTAAGCTTCAGAGTGCGGAAGCAGATGTCATAAAGAGCTTCGTTATCAATACAGAAGGTCTCGTCAGCGTTCTCAACAAGGTGATGAACGGTAAGGGTGGCGTTGTAGGGCTCGACAACGGTATCCGACACCTTGGGAGAGGGTACAACTGAGAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Massospora_diceroproctae_DB138 GTGTTATTGCCAATAAAGGTGGCACTCATCTTCAAACCAGAGGGAGGAATGTTGCATACACTCGTCTTGATGTTGTGGGGGATCCATTCAACAAAGTAGTTGGAATTTTTCTTGTGGATGTCAACCATCTGCTGCTCAACTTCCTTCATCGACAGACGACCACGGAAGAAGGCCGCAACCGTCAAGTAGCGGCCGTGGCGAGGGTCAGAGGCAGCCATCATATTCTTCGCATCAAACATCTGAGCAGTAAGTTCAGGAACAGTCAACGATTGATACTGCTTCGAGTCCTTGGCCGTCAGAGGAGCAAAGCCGACCATGAAGAAATGAAGCCGGGGGAACGGAATCAAATTGACCGCCAACTTACGGAGATCAGCATTCAGCTGGCCTGGGAAACGAAGGGAAGTGGTGACTCCCGACATAACTTGAGAGACGAGATGGTTGAGGTCGCCGTAACTGGGGTTATTGAGCTTCAAGGTGCGGAAACAGATGTCATAAAGGGCCTCGTTATCGATACAGAAAGTCTCGTCAGCGTTTTCAACGAGATGGTGGACAGTAAGGGTAGCGTTATAGGGTTCGACGACGGTATCGGACACCTTGGGAGATGGGACCACCGAAAAGGTGCACATCATCCGATCGGGAAACTCCTCGCGAATTTTGGAAATGAGAAGAGAGCCGAGACCAGAACCGGTACCGCCTCCCAGTGAGTGAGCAACCTGAAAACCTTGGAGAGAGTCGCAATTCTCAGTTTCCTTGCGAACAATTTCGAGGATGTTATCGACAAGCTCAGCGCCCTCGGTGTAATAA------------------------------------------------------------- Massospora_diceroproctae_DB176 GTGTTATTGCCAATAAAGGTGGCACTCATCTTCAAACCAGAGGGAGGAATGTTGCATACACTCGTCTTGATGTTGTGGGGGATCCATTCAACAAAGTAGTTGGAATTTTTCTTGTGGATGTCAACCATCTGCTGCTCAACTTCCTTCATCGACAGACGACCACGGAAGAAGGCCGCAACCGTCAAGTAGCGGCCGTGGCGAGGGTCAGAGGCAGCCATCATATTCTTCGCATCAAACATCTGAGCAGTAAGTTCAGGAACAGTCAACGATTGATACTGCTTCGAGTCCTTGGCCGTCAGAGGAGCAAAGCCGACCATGAAGAAATGAAGCCGGGGGAACGGAATCAAATTGACCGCCAACTTACGGAGATCAGCATTCAGCTGGCCTGGGAAACGAAGGGAAGTGGTGACTCCCGACATAACTTGAGAGACGAGATGGTTGAGGTCGCCGTAACTGGGGTTATTGAGCTTCAAGGTGCGGAAACAGATGTCATAAAGGGCCTCGTTATCGATACAGAAAGTCTCGTCAGCGTTTTCAACGAGATGGTGGACAGTAAGGGTAGCGTTATAGGGTTCGACGACGGTATCGGACACCTTGGGAGATGGGACCACCGAAAAGGTGCACATCATCCGATCGGGAAACTCCTCGCGAATTTTGGAAATGAGAAGAGAGCCGAGACCAGAACCGGTACCGCCTCCCAGTGAGTGAGCAACCTGAAAACCTTGGAGAGAGTCGCAATTCTCAGTTTCCTTGCGAACAATTTCGAGGATGTTATCGACAAGCTCAGCGCCCTCGGTGTAATAACCCTTGGCCCAGTTGTTGCCAGCACCGGATTGCCCGTAAACGAAGTTATCAGGGCGGTACA Massospora_diceroproctae_DB128 GTGTTATTGCCAATAAAGGTGGCACTCATCTTCAAACCAGAGGGAGGAATGTTGCATACACTCGTCTTGATGTTGTGGGGGATCCATTCAACAAAGTAGTTGGAATTTTTCTTGTGGATGTCAACCATCTGCTGCTCAACTTCCTTCATCGACAGACGACCACGGAAGAAGGCCGCAACCGTCAAGTAGCGGCCGTGGCGAGGGTCAGAGGCAGCCATCATATTCTTCGCATCAAACATCTGAGCAGTAAGTTCAGGAACAGTCAACGATTGATACTGCTTCGAGTCCTTGGCCGTCAGAGGAGCAAAGCCGACCATGAAGAAATGAAGCCGGGGGAACGGAATCAAATTGACCGCCAACTTACGGAGATCAGCATTCAGCTGGCCTGGGAAACGAAGGGAAGTGGTGACTCCCGACATAACTTGAGAGACGAGATGGTTGAGGTCGCCGTAACTGGGGTTATTGAGCTTCAAGGTGCGGAAACAGATGTCATAAAGGGCCTCGTTATCGATACAGAAAGTCTCGTCAGCGTTTTCAACGAGATGGTGGACAGTAAGGGTAGCGTTATAGGGTTCGACGACGGTATCGGACACCTTGGGAGATGGGACCACCGAAAAGGTGCACATCATCCGATCGGGAAACTCCTCGCGAATTTTGGAAATGAGAAGAGAGCCGAGACCAGAACCGGTACCGCCTCCCAGTGAGTGAGCAACCTGAAAACCTTGGAGAGAGTCGCAATTCTCAGTTTCCTTGCGAACAATTTCGAGGATGTTATCGACAAGCTCAGCGCCCTCGGTGTAATAACCCTTGGCCCAGTTGTTGCCAGCACCGGATTGCCCGTAAACGAAGTTATCAGGGCGGTACA Entomophthora_muscae_ARSEF3074 GTGTTGTTACCAATGAAGGTAGCACTCATCTTCAAACCAGAAGGAGGGATGTTACAGACACTRGTWTTRATGTTGTGAGGAATCCATTCCACRAAGTAGYTGGTGTTCTTCTTGTGGATRTCAACCATCTGCTGGTCAACCTCCTTCATTGAAAGACGGCCACGGAAGAAAGCGGCAACAGTCAGGTAGCGACCGTGACGAGGATCMGAAGCAGCCATCATGTTTTTGGCATCAAACATCTGAGCAGTCAGCTCAGGAACAGTCAATGACTGRTATTGYTTRGAGTTTTTGGRGGTTAGAGGAGCAAAYCCAACCATGAAGAAATGRAGACGGGGRAAGGGAATCAARTTGACAGCCAACTTACGGAGATCGGCATTCAGCTGYCCGGGGAAACGAAGGGAAGTGGTGACTCCGGACATGACCTGGGAAACAAGATGGTTAAGRTCACCRTAACYRGGGTTAGTCAGCTTCAGGGTGCGGAAGCAGATATCATAAAGAGCCTCGTTATCGATACAGAAGGTCTCATCRGCATTCTCAACAAGATGRTGAACAGTCAGAGTGGCATTGTAAGGCTCAACGACAGTGTCTGACACCTTGGGAGAGGGAACAACGGAGAAGGTACACATCATACGATCAGGAAAYTCCTCACGGATTTTGGAGATAAGAAGGGAACCGAGACCAGAACCAGTACCACCACCCAGAGAGTGAGCGACTTGGAAACCTTGAAGGGAGTCACAGTTCTCAGTTTCCTTGCGAACGATTTCAAGAATGCTGTCAACAAGCTCAGCACCCTCGGTGTAGTAACCCTTGGCCCAGTTGTTACCGGCACCAGACTGTCCATAAACAAAGTTGTCTGGGCGGAACA ; END; BEGIN TREES; Title Massospora_BTUB_BI_tree; ID 0170455c50971; LINK Taxa = Taxa; TRANSLATE [0] 1 Massospora_cicadina_MC17, [1] 2 Massospora_cicadina_GK2, [2] 3 Massospora_cicadina_MC7, [3] 4 Massospora_cicadina_MICH231384, [4] 5 Massospora_levispora_ML2, [5] 6 Massospora_platypediae_NM4, [6] 7 Massospora_tettigatis_PL373, [7] 8 Massospora_tettigatis_PL5042, [8] 9 Massospora_diceroproctae_DB138, [9] 10 Massospora_diceroproctae_DB176, [10] 11 Massospora_diceroproctae_DB128, [11] 12 Entomophthora_muscae_ARSEF3074; TREE con_50_majrule = (1:0.0183779,2:0.03515992,3:0.001964602,(4:0.04649878,((((5:0.001434189,6:0.002138606):0.0363353,(7:0.001220573,8:0.001276782):0.05863113):0.01535742,12:0.1357955):0.05056023,(9:0.000831284,10:0.0007667543,11:0.0007563338):0.1180801):0.03259705):0.01568407); END; BEGIN SETS; CHARSET 28S = 1- 651; CHARSET EFL = 652- 865; CHARSET BTUB = 865; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 865; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 865; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 865; END; BEGIN TREES; Title Massospora_BTUB_ML_tree; ID 0170455f11763; LINK Taxa = Taxa; TRANSLATE [0] 1 Massospora_cicadina_MC17, [1] 2 Massospora_cicadina_GK2, [2] 3 Massospora_cicadina_MC7, [3] 4 Massospora_cicadina_MICH231384, [4] 5 Massospora_levispora_ML2, [5] 6 Massospora_platypediae_NM4, [6] 7 Massospora_tettigatis_PL373, [7] 8 Massospora_tettigatis_PL5042, [8] 9 Massospora_diceroproctae_DB138, [9] 10 Massospora_diceroproctae_DB176, [10] 11 Massospora_diceroproctae_DB128, [11] 12 Entomophthora_muscae_ARSEF3074; TREE Imported_tree_1 = (((((6:0.0014869394763784044,5:0.0007616261233483971):0.03641303377817016[%bootstrapFrequency = 99 ],(7:0.00000100000050002909,8:0.00000100000050002909):0.06296438024459215[%bootstrapFrequency = 100 ]):0.011063114474848021[%bootstrapFrequency = 56 ],12:0.14927673087429932):0.051776744950859176[%bootstrapFrequency = 98 ],((11:0.00000100000050002909,10:0.00000100000050002909):0.00000100000050002909[%bootstrapFrequency = 92 ],9:0.00000100000050002909):0.12881697469385978[%bootstrapFrequency = 100 ]):0.032285131171077036[%bootstrapFrequency = 81 ],(2:0.037413739094816045,(1:0.02124778028072819,3:0.00000100000050002909):0.00000100000050002909[%bootstrapFrequency = 23 ]):0.015708383499473313[%bootstrapFrequency = 87 ],4:0.04825270026142023)[% ] [% ] [% setBetweenDouble = bootstrapFrequency ]; END; BEGIN TREES; Title Massospora_BTUB_MP_all_MP_trees; ID 01704567eb8b5; LINK Taxa = Taxa; TRANSLATE [0] 1 Massospora_cicadina_MC17, [1] 2 Massospora_cicadina_GK2, [2] 3 Massospora_cicadina_MC7, [3] 4 Massospora_cicadina_MICH231384, [4] 5 Massospora_levispora_ML2, [5] 6 Massospora_platypediae_NM4, [6] 7 Massospora_tettigatis_PL373, [7] 8 Massospora_tettigatis_PL5042, [8] 9 Massospora_diceroproctae_DB138, [9] 10 Massospora_diceroproctae_DB176, [10] 11 Massospora_diceroproctae_DB128, [11] 12 Entomophthora_muscae_ARSEF3074; TREE 'PAUP_1' = (1,(2,(4,((((5,6),(7,8)),12),(9,10,11)))),3); TREE 'PAUP_2' = (1,2,(3,(4,((((5,6),(7,8)),12),(9,10,11))))); TREE 'PAUP_3' = (1,(2,3),(4,((((5,6),(7,8)),12),(9,10,11)))); TREE 'PAUP_4' = (1,(2,(4,((((5,6),(7,8)),12),(9,(10,11))))),3); TREE 'PAUP_5' = (1,2,(3,(4,((((5,6),(7,8)),12),(9,(10,11)))))); TREE 'PAUP_6' = (1,(2,3),(4,((((5,6),(7,8)),12),(9,(10,11))))); END; BEGIN TREES; Title 'Massospora BTUB MP Majority-Rule Consensus tree'; ID 0170456952a96; LINK Taxa = Taxa; TRANSLATE [0] 1 Massospora_cicadina_MC17, [1] 2 Massospora_cicadina_GK2, [2] 3 Massospora_cicadina_MC7, [3] 4 Massospora_cicadina_MICH231384, [4] 5 Massospora_levispora_ML2, [5] 6 Massospora_platypediae_NM4, [6] 7 Massospora_tettigatis_PL373, [7] 8 Massospora_tettigatis_PL5042, [8] 9 Massospora_diceroproctae_DB138, [9] 10 Massospora_diceroproctae_DB176, [10] 11 Massospora_diceroproctae_DB128, [11] 12 Entomophthora_muscae_ARSEF3074; TREE 'PAUP_1' = (1:100,2:100,3:100,(4:100,((((5:100,6:100):100,(7:100,8:100):100):86.402,12:100):67.089,(9:100,10:100,11:100):100):88.516):72.813); END; BEGIN TREES; Title Massospora_BTUB_MP_Bootstrap_Consensus_tree; ID 01704569a3497; LINK Taxa = Taxa; TRANSLATE [0] 1 Massospora_cicadina_MC17, [1] 2 Massospora_cicadina_GK2, [2] 3 Massospora_cicadina_MC7, [3] 4 Massospora_cicadina_MICH231384, [4] 5 Massospora_levispora_ML2, [5] 6 Massospora_platypediae_NM4, [6] 7 Massospora_tettigatis_PL373, [7] 8 Massospora_tettigatis_PL5042, [8] 9 Massospora_diceroproctae_DB138, [9] 10 Massospora_diceroproctae_DB176, [10] 11 Massospora_diceroproctae_DB128, [11] 12 Entomophthora_muscae_ARSEF3074; TREE 'PAUP_1' = (1:100,2:100,3:100,(4:100,((((5:100,6:100):100,(7:100,8:100):100):86.402,12:100):67.089,(9:100,10:100,11:100):100):88.516):72.813); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1581720041058; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 9008113467634957026; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1508175236503912090; mqVersion 360; checksumv 0 3 584724833 null getNumChars 865 numChars 865 getNumTaxa 12 numTaxa 12 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 168758.0 sumSquares 1.3835058055282176E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 335; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1182 472; setLocation 203 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #9008113467634957026 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0170455c50971; toggleUseWeights off; endTell; setAssignedID 1103.1581713191571.3973439527694944166; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 847 400; setLocation 203 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; setSelectedTaxonHighlightMode 1; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; setTaxonNameStyler #mesquite.trees.NoColorForTaxon.NoColorForTaxon; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(12:0.06789775,(((5:0.001434189,6:0.002138606):0.0363353,(7:0.001220573,8:0.001276782):0.05863113):0.01535742,((9:0.000831284,10:0.0007667543,11:0.0007563338):0.1180801,(4:0.04649878,(1:0.0183779,2:0.03515992,3:0.001964602):0.01568407):0.03259705):0.05056023):0.06789775);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1508175236503912090 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 204; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 847 400; setLocation 203 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;