#NEXUS [written Tue Aug 31 17:15:47 CEST 2021 by Mesquite version 3.70 (build 940) at 201715inchMBP/192.168.2.86] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=29; TAXLABELS Candida_glabrata_MH545922.1 Backusella_lamprospora_MH866118.1 Suhomyces_taliae_KY106790.1 Suhomyces_tanzawaensis_KY106794.1 Suhomyces_atakaporum_KY106307.1 Suhomyces_panamericanus_JQ025407.1 Candida_broadrunensis_KY106372.1 Candida_sake_KY106732.1 Candida_albicans_U45776.1 Candida_gigantensis_AY520316.1 Candida_tropicalis_KX198669.1 Candida_sojae_KJ722420.1 'Candida neerlandica NG_054776.1' 'Candida frijolesensis NG_054802.1' 'Candida labiduridarum NG_042506.1' 'Candida tetrigidarum NG_042507.1' 'Candida prachuapensis NG_054767.1' Candida_saraburiensis_AB534915.1 'Candida saraburiensis NG_054769.1' Candida_pseudoviswanathii_KM586735.1 Candida_tropicalis_AB034689.1 Candida_aquae-textoris_LC497849.1 Candida_viswanathii_U45752.1 Candida_viswanathii_MF682371.1 Candida_pellucida_MN908679.1 Candida_pellucida_MN908680.1 Candida_pellucida_MN908681.1 Candida_pellucida_MN908682.1 Candida_pellucida_MT013027.1 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1094; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Candida_glabrata_MH545922.1 TTTGACCTCAAATCAGGTAGGGTTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACTGGGATTGCCTTAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACC--TTTGGTGCCCGAGTTGTAATTTGGAGAGTACCACTTTGGGACTGTACTTTGCCTATGTTCCTTGGAACAGGACGTCATGGAGGGTGAGAATCCCGTGT---GGCGAGG-GTGTCAGTTCTTTGTAAAGGGTGCTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGCG---CCCCTTGCCTCTCGTGGGCTTGGGACTCTCGCAGCTCACTGG---GCCAGCATCGGTTTTG-GCGGCCGGAAAAAACCTAGGGAATGTGGCTCTGCGCCTCGGTGTAGAGTGTTATAGCCCTG--GGGAATACG----GCCAGTCGGGACCGAGGACTGCGATA----------------------------------------------------------------------------------------------------------CTTGTTATCTAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Backusella_lamprospora_MH866118.1 -------------------------------------------ATCAATAAGCGGAGGAAAA-GAAA-ATAACAATGATTTCCCTAGTAACGGCGAGTGAAGAGGAAAGAGCTCAAAGTTGGAATCCGGCTGCCCTAGGTAGTTGGAGTTGTAAACTGGAGAAGTGTTTTCCAGGCGAGCCAAGCGAATAAGTCCTTTGGAACGGGGCATCATAGAGGGTGAGAATCCCGTCTTTGGCTTGAGCGATTC-GTCTATTGCGATACACTTTCAAAGAGTCAGGTTGTTTGGGAATGCAGCCTAAATTGGGTGGTAAATCTCACCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTATGTGAAATTGTTGAAAGGGAACCGTTTGGAGCCAGACCGGCCGTTCTATAATCAATCTCTGCC-TCGGTGGG--GATGCACTTGTAGGGCGTTGGCCTGCCAACAGCAATTTTGCCTGATGGAAAAAACCATGAGGAATGTGGC-----CCTTCG-----GGGTGTTATAGCCTCTTGGAAAATAC-----ATTGGGCGGGATTGAGGACTGCAGCAAATGCTCTTTAGGGCGAAATACCTGGGCGCTTGTGTTGAAGACGTGTAGAATCTCTGCTTCGGGTGGTGCTATGCTCTGATGTGCAACTCGCTTAGACTATTTTCTATTTTTGCTTAGGTTGTTGGCTTAATGACTCTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCCATCATAGGTGCGAGTCTTTGGGTGACAAACCCGCAGGCGCAAGGAAACTG-ATGGGTACGAAGGCCTCACGGCTGGCAGTACCGTCCGGCAAGGACGTTTTAACAGAATTGACCGCGATAAAGCACTTATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAASCCAGAAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAAGAAACTAATCGAACCATCTAGTAGCTGGTTCTGC-------- Suhomyces_taliae_KY106790.1 ---------------------------------------GCATATCAATAAGCGGAGGAAAAAGAAAACCAACCGGGATTGCCTTAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCTGATTCAGGGTCCGAATTGTAATTTGAAGAA-GCGACTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGAAG-CCCAGGTTCGTGTAAAGCGTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTTGTTTTTC-CA---TGGCGCTCTT-TTGGGGGT----GTCCTCTG-GGTCTACAGG---GCCAGCATGGGTTTTG-CGGGCGAGACAAGGACTCAGGAATGTGGCTCT--GCTTCGGTG--GAGTGTTATAGCCTG-----GGGTACTGGTCGCCATGCGGGACCGAGGACTGCGGT------------------------------------------------------------------------------------------------------------A------CTAGGATGCTGGCATAATGATCTTAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGGAATGAAAGTGAACGTAGGTGAGAGCCCGCAAGGGCGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCC------ Suhomyces_tanzawaensis_KY106794.1 ---------------------------------------GCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGC-C----TC-TGGTCCGAGTTGTAATTTGAAGAA-GCGACTTTGGTACCGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATG-CCCGGTGCCGTGTAAAGCGTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTTGTATTTC-CA---TGGCGCTCTC-TCGGGGGT----GTCCTCTG-GGTTTACAGG---GCCAGCATGGGTTCTG-CGGGCGAGATAAGGACCTGGGAATGTGGCTCT--ACTTCGGTG--GAGTGTTATAGCCCA-----GGGTACTGGTCGCCACGCGGGACCGAGGACTGCGAA------------------------------------------------------------------------------------------------------------T------CTAGGATGCTGGCATAATGATCTTAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGGAATGAAAGTGAACGTAGGTGAGAGCT--CTAGGGCGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAG-- Suhomyces_atakaporum_KY106307.1 -----------------------------------------------------------------------------------------------------GCGGCAAAAGCTCAAATTTGAAATCTGGC-C----TC-CGGTCCGAGTTGTAATTTGAAGAA-GCGACTTTGGTACCGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATG-TCCGGTGCTATGTAAAGCGTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTTGTATTTC-CA---TGGCGCTCTT-TCGGGGGT----GTCCTCTG-GGTTTACAGG---GCCAGCATGGGTTCTG-CGGGCGAGATAAGGACTTAGGAATGTGGCTCC--GCTTCGGGG--GAGTGTTATAGCCTG-----ATGTACTGGTCGCCACGCGGGACCGAGGACTGCGAA------------------------------------------------------------------------------------------------------------T------CTAGGATGCTGGCATAATGATCTTAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGGAATGAAAGTGAACGTAGGTGAGAGCT--TC--GGCGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTT Suhomyces_panamericanus_JQ025407.1 ------------------------ACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGC-C----TC-TGGTCCGAATTGTAATTTGAAGAA-GCGACTTTGGTACCGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGCTCCGGTGCTATGTAAAGCGTTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTTGTATTTC-CA---TGGCGCTCTT-TCGGGGGT----GTCCTCTG-GGTTTACAGG---GCCAGCATGGGTTCTG-CGGGCGAGACAAGGTTCTAGGAATGTGGCTCT--GCTTCGGTG--GAGTGTTATAGCCTG-----GGGTACTAGTCGCCACGCGGGACCGAGGACTGCGAT------------------------------------------------------------------------------------------------------------T------CTAGGATGCTGGCATAATGATCCCAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGGAATGAAAGTGAACGTAGGTGAGAGCT--TC--GGCGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA---------------------------------------- Candida_broadrunensis_KY106372.1 --------------------------------AACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGTCTTAGTAACGGCGAGTGAAGCGACAAAAGCTCAAATTTGAAATCTGGCGCC--TTCGGTGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGTTTTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATG-CCCAATTCCATGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTCTTACTT-TCGGGTGG----GGCCTCTGCAGTTTACCGG---GCCAGCATCAGTTTGG-ATGGTAGGATAATGACATTGGAATGTGGCTCT--GCTTCGGTA--GAGTGTTATAGCCCTT--GTTGATACT----GCCTGTCTAGACTGAGGACTGCG--------------------------------------------------------------------------------------------------------------TCTTTGACTAGGATGCTGGCATAATGATCCTAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAGAGCCC-TTTGGGTGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAA--- Candida_sake_KY106732.1 --------------------------------AACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACCGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTG---------CGTAAGCCGAGTTGTAATTTGAAGATGGCTACTTTGGTAATGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATG-TCCATTACCGTGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGGCTTGCTT-TCGGGCGG----GTCCTCTGCAGTTTACTGG---GCCAGCATCGGTTTGG-GTGGCAGGATAATAGCATAGGAATGTGGCTCT--ACTTCGGTG--GAGTGTTATAGCCTTT--GTTGATACT----GCCTGCCTAGACCGAGGACTGCGTC------------------------------------------------------------------------------------------------------------TTT-TGACTAGGATGCTGGCATAATGATCCTAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGGAATGAAAGTGAACGTAGATGAGAGCCT-TTTAGGCGCATCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTT Candida_albicans_U45776.1 ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTC--TTTGGCGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCCGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCGGGTCTGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGCA---TGTTGCTCTC-TCGGGGGC----GGCCGCTGCGGTTTACCGG---GCCAGCATCGGTTTGGAGCGGCAGGATAATGGCGGAGGAATGTGGCACG--GCTTCTGCT--GTGTGTTATAGCCTCT--GACGATACT----GCCAGCCTAGACCGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTT-TACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_gigantensis_AY520316.1 -----------------------------------------ATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGCT--TTCAGCGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCCGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCGGGTCTATGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTGCTTCT-TCGGGGGC----GGCCTCTACAGTTTGCCGG---GCCAGCATCGGTTTGGAGCGGTAGGATAATTGCTTTGGAATGTGGCACG--GCCTCGGTT--GTGTGTTATAGCCTCT--GCAGATACT----GCCAGCCTAGACCGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTT-TACCTAGGATGTTGGCATAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_tropicalis_KX198669.1 TTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGATCCAGGCCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTACTTCT-TCGGGGGT----GGCCTCTACAGTTTATCGG---GCCAGCATCAGTTTGG-GCGGTAGGAGAATTGCGTTGGAATGTGGCACG--GCTTCGGTT--GTGTGTTATAGCCTTT--GTCGATACT----GCCAGCCTAGACTGAGGACTGCGG-------------------------------------------------------------------------------------------------------------TTTATACCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGGGGGCCCGTATGGGTGCACCATCGACCGATCCTGATGTCTT--CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAA-AGA--CTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTT Candida_sojae_KJ722420.1 --------------AGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCACTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGATCCAGGCCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTACTTCT-TCGGGGGT----GGCCTCTACAGTTTACCGG---GCCAGCATCAGTTTGG-GCGGTAGGAGAATTGCGATGGAATGTGGCACG--GCCTCGGTT--GTGTGTTATAGCCTTC--GTAGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTTATACCTAGGATGTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ 'Candida neerlandica NG_054776.1' ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGATCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTACTTCT-TCGGGGGT----GGCCTCTACAGTTTACCGG---GCCAGCATCAGTTTGG-GCGGTAGGAGAATCGCTTGGGAACGTGGCACG--ACCTCGGTT--GTGTGTTATAGCCCTT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGAT------------------------------------------------------------------------------------------------------------TTA-TATCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida frijolesensis NG_054802.1' -----------------------------------------ATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTGCTTCT-TCGGGGGC----GGCCTCTACAGTTTACCGG---GCCAGCATCAGTTTGGTGCGGTAGGAGAATCGCTTGGGAATGTGGCACG--GCCTCGGTT--GTGTGTTATAGCCCTT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGA-------------------------------------------------------------------------------------------------------------TTA-TATCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida labiduridarum NG_042506.1' -----------------------------------------ATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTGCTTCT-TCGGGGGC----GGCCTCTACAGTTTACCGG---GCCAGCATCAGTTTGG-GCGGTAGGAGAATCGCTTGGGAACGTGGCACG--ACCTCGGTT--GTGTGTTATAGCCCTT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGA-------------------------------------------------------------------------------------------------------------TTA-TATCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida tetrigidarum NG_042507.1' -----------------------------------------ATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGGCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGTCCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTA---TGTTACTTCT-TCGGGGGT----GGCCTCTGCAGTTTGCCGG---GCCAGCATCAGTTTGG-GCGGTAGGACAATCGCGCAGGAACGTGGCACG--GCTTCGGTT--GTGTGTTATAGCCTGT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGG-------------------------------------------------------------------------------------------------------------TTTATACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida prachuapensis NG_054767.1' ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCTATGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGCA---TGTTGTTCCC-TCGGGGGC----GGCCTCTGCGTTTTACCGG---GCCAGCATCAGTTTGG-GCGGTAGGACAATCGCGCGGGAACGTGGCACG--GCCTCGGCT--GTGTGTTATAGCCCGT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTA-TACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_saraburiensis_AB534915.1 ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAGGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGCTTACCGG---GCCAGCATCAGTTTGG-GCGGTCGGACAATCGCGCGGGAACGTGGCACG--GCCTCGGCC--GTGTGTTATAGCCCGT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTTATACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida saraburiensis NG_054769.1' ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAGGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCCTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGCTTACCGG---GCCAGCATCAGTTTGG-GCGGTCGGACAATCGCGCGGGAACGTGGCACG--GCCTCGGCC--GTGTGTTATAGCCCGT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTTATACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pseudoviswanathii_KM586735.1 ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGTTTGTCGG---GCCAGCATCAGTTTGG-GCGGTAGGACAATCGCGCGGGAACGTGGCACG--GCCTCGGTT--GTGTGTTATAGCCCGT--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTA-TACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_tropicalis_AB034689.1 ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGTTTGTCGG---GCCAGCATCAGTTTGG-GCGGTAGGACAATCGCGCGGGAATGTGGCACG--GCCTCGGCT--GTGTGTTATAGCCCGC--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTA-TACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_aquae-textoris_LC497849.1 -------------------------------------------------------------------------------------------------------GGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGTTTGTCGG---GCCAGCATCAGTTTGG-GCGGTAGGACAATCGCGCGGGAATGTGGCACG--GCCTCGGCT--GTGTGTTATAGCCCGC--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTA-TACCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_viswanathii_U45752.1 ----------------------------------------------------------------AAA-CCAACAGGGATTGCCTTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGTTTGTCGG---GCCAGCATCAGTTTGG-GCGGCAGGACAATCGCGTGGGAATGTGGCACG--GCCTCGGCT--GTGTGTTATAGCCCGC--GTGGATACT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------TTA-TACCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_viswanathii_MF682371.1 -------------------------------------------------------------------------------------------GGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGAGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGAGATGACCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGTTTGTCGG---GCCAGCATCAGTTTGG-GCGGCAGGACAATCGCGCGGGAATGTGGCACG--GCCTCGGCT--GTGTGTTATAGCCCGC--GTGGATACT----GCCAGCCTAGACTGAGGACTGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pellucida_MN908679.1 TTTGACCTCAAGTCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGGGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGCTTGCCGG---GCCAGCATCAGTTTGG-GCGGCAGGAGAATTGCGCGGGAATGTGGCACG--GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Candida_pellucida_MN908680.1 TTTGACCTCAAGTCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGGGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pellucida_MN908681.1 TTTGACCTCAAGTCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGGGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pellucida_MN908682.1 TTTGACCTCAAGTCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGGGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pellucida_MT013027.1 TTTGACCTCAAGTCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA-GAAA-CCAACAGGGATTGCCTCAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCTCT--TTCAGGGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGC---GATGGGATGATCCAGGTCCGTGTAAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGCATTTTGCA---TGTTGCTTCT-TCGGGGGC----GGCCTCTGCGGCTTGCCGG---GCCAGCATCAGTTTGG-GCGGCAGGAGAATTGCGCGGGAATGTGGCACG--GTCTCGGCC--GTGTGTTATAGCCCGT--GTGGATGCT----GCCAGCCTAGACTGAGGACTGCGGT------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ; END; BEGIN mrbayes; outgroup Candida_glabrata_MH545922.1; charset locus1 = 1 -1094; charset excludedchars = 1 -103 623 -1094; exclude excludedchars; partition AllLoci = 1 : locus1; log start filename = 000BasidiomycotaLSUyeasts.log; END; BEGIN mrbayes; set partition = AllLoci; prset statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); lset nst = 6 rates = invgamma; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 10000000000 nchains = 4 printfreq = 5 temp = 0.15 samplefreq = 5 savebrlens = yes stoprule = yes stopval = 0.01 filename = 000BasidiomycotaLSUyeasts; mcmc; sump; sumt; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 1094; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 1094; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 1094; END; BEGIN TREES; Title 'Fig. 2 Overview Saccharomycetes LSU phylogeny'; ID 017b9c547f983; LINK Taxa = Taxa; TRANSLATE [0] 1 Candida_glabrata_MH545922.1, [1] 2 Backusella_lamprospora_MH866118.1, [2] 3 Suhomyces_taliae_KY106790.1, [3] 4 Suhomyces_tanzawaensis_KY106794.1, [4] 5 Suhomyces_atakaporum_KY106307.1, [5] 6 Suhomyces_panamericanus_JQ025407.1, [6] 7 Candida_broadrunensis_KY106372.1, [7] 8 Candida_sake_KY106732.1, [8] 9 Candida_albicans_U45776.1, [9] 10 Candida_gigantensis_AY520316.1, [10] 11 Candida_tropicalis_KX198669.1, [11] 12 Candida_sojae_KJ722420.1, [12] 13 'Candida neerlandica NG_054776.1', [13] 14 'Candida frijolesensis NG_054802.1', [14] 15 'Candida labiduridarum NG_042506.1', [15] 16 'Candida tetrigidarum NG_042507.1', [16] 17 'Candida prachuapensis NG_054767.1', [17] 18 Candida_saraburiensis_AB534915.1, [18] 19 'Candida saraburiensis NG_054769.1', [19] 20 Candida_pseudoviswanathii_KM586735.1, [20] 21 Candida_tropicalis_AB034689.1, [21] 22 Candida_aquae-textoris_LC497849.1, [22] 23 Candida_viswanathii_U45752.1, [23] 24 Candida_viswanathii_MF682371.1, [24] 25 Candida_pellucida_MN908679.1, [25] 26 Candida_pellucida_MN908680.1, [26] 27 Candida_pellucida_MN908681.1, [27] 28 Candida_pellucida_MN908682.1, [28] 29 Candida_pellucida_MT013027.1; TREE 'Fig. 2 Overview Saccharomycetes LSU phylogeny' = (2:0.8297021,1:0.2154624,(((((((((((((25:0.001785535,26:0.003160016,27:0.003119237,28:0.003166724,29:0.001864136):0.02247652,(23:0.003637656,24:0.001578311):0.002788846):0.003637306,21:0.001569719,22:0.001626395):0.005964425,20:0.003633436):0.008355982,(18:0.001490075,19:0.001472261):0.01318791):0.005846838,17:0.01136167):0.01550702,16:0.01878141):0.01474294,(13:0.002621114,(14:0.007552476,15:0.002019903):0.007619719):0.007775779):0.01386152,(11:0.008466841,12:0.008911312):0.00932301):0.03484649,10:0.006345545):0.03413304,9:0.02906148):0.05660542,(7:0.03215793,8:0.05539233):0.03225641):0.02679644,(3:0.03297966,(4:0.01708513,(5:0.0171507,6:0.01384753):0.007465088):0.02044383):0.08590159):0.06584025); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1630422947348; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5782712914628698128; tell It; setDefaultOrder 20 28 24 25 26 27 22 23 21 14 15 16 17 18 19 13 12 10 11 9 7 8 5 6 0 1 2 3 4; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7508725043492123137; mqVersion 370; checksumv 0 3 3618936757 null getNumChars 1094 numChars 1094 getNumTaxa 29 numTaxa 29 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 411486.0 sumSquares -9.2233720368543826E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 259; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1177 764; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #5782712914628698128 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #5782712914628698128; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 918 692; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5782712914628698128 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 017b9c547f983; toggleUseWeights off; endTell; setAssignedID 1198.1630415391565.815324637979640500; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 918 692; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; setSelectedTaxonHighlightMode 1; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; setTaxonNameStyler #mesquite.trees.NoColorForTaxon.NoColorForTaxon; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(1:0.2154624,2:0.8297021,((3:0.03297966,(4:0.01708513,(5:0.0171507,6:0.01384753):0.007465088):0.02044383):0.08590159,((7:0.03215793,8:0.05539233):0.03225641,(9:0.02906148,(10:0.006345545,((11:0.008466841,12:0.008911312):0.00932301,((13:0.002621114,(14:0.007552476,15:0.002019903):0.007619719):0.007775779,(16:0.01878141,(17:0.01136167,((18:0.001490075,19:0.001472261):0.01318791,(20:0.003633436,(21:0.001569719,22:0.001626395,((23:0.003637656,24:0.001578311):0.002788846,(25:0.001785535,26:0.003160016,27:0.003119237,28:0.003166724,29:0.001864136):0.02247652):0.003637306):0.005964425):0.008355982):0.005846838):0.01550702):0.01474294):0.01386152):0.03484649):0.03413304):0.05660542):0.02679644):0.06584025);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7508725043492123137 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 918 692; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleColorOnlyTaxonNames off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;