#NEXUS [written Mon Sep 30 14:17:23 EDT 2019 by Mesquite version 3.5 (build 888) at pbardens-imac.resource.campus.njit.edu/10.202.3.18] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=46; TAXLABELS Metapolybia_cingulata Scolia_verticalis Chalybion_californicum Heterogyna Martialis_heureka Leptanilla_swani Anomalomyrma_sp Apomyrma_stygia Opamyrma_hungvuong Amblyopone_pallipes Tatuidris_tatusia Paraponera_clavata Proceratium_stictum Platythyrea_punctata Leptogenys_diminuta Hypoponera_opacior Cerapachys_sexspinus Leptanilloides_nomada Myrmecia_nigrisceps Nothomyrmecia_macrops Tetraponera_punctata Aneuretus Lasius_californicus Formica_fusca Kyromyrma Pogonomyrmex_californicus Myrmica_americana Acanthoponera_minor Gerontoformica_magnus Gerontoformica_gracilis Gerontoformica_pilosus Gerontoformica_spiralis Sphecomyrma_freyi Zigrasimecia Myanmyrma_gracilis Camelomecia Brownimecia_clavata Haidomyrmex_scimitarus Haidomyrmodes_mammuthus Haidoterminus_cippus Ceratomyrmex Protoceratomyrmex Linguamyrmex Dhagnathos Chonidris Aquilomyrmex ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=65; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5 6 7"; CHARSTATELABELS 1 Occipital_foramen, 2 'Mandible Orientation*', 3 'Clyeal Pegs*', 4 'Labral Pegs*', 5 Posterior_Clypeal_Sulcus, 6 'Clypeus Development*', 7 Subgenal_sulcus, 8 'Post Antennal Marg*', 9 'Torulus*', 10 'Frontal Lobe*', 11 'Frontal Lobe Notched*', 12 'Scape Length*', 13 'Antennal Segments*', 14 'Ocelli*', 15 'Compound Eye*', 16 Bidentate_Mandibles, 17 Basal_flange_present, 18 Inner_margin_toothed, 19 Lat_eye_position, 20 Eye_abutting_vertex, 21 Head_depth, 22 Clypeus_concave, 23 Clypeal_ridges_with_teeth, 24 'Clypeal Peg Structure*', 25 'Frontal Carina*', 26 Frontal_Triangle, 27 Frontal_triangle_fused, 28 Trigger_Setae, 29 Eye_shape, 30 Clypeal_Process, 31 Clypeal_brush, 32 Clypeal_Stalk, 33 Clypeal_Lobe, 34 Anterior_margin_of_clypeus, 35 Antennal_socket_vertex, 36 Pronotal_collar_lip, 37 Propodeal_spiracle_shape, 38 'Metapleural Gland*', 39 'Metapleural gland opening*', 40 Propodeal_Shelf, 41 Metatibial_setae, 42 'Post Pronotal Development*', 43 'Pronotal Lobe*', 44 'Propleuron*', 45 'Promesonotal Suture*', 46 'Metanotum*', 47 'Propodeal Suture*', 48 'Trochantellus*', 49 'Pretarsal Claw*', 50 'Pygidial Teeth*', 51 Subpetiole_spicule, 52 Subpetiole_lamella, 53 'Petiole*', 54 'Petiole Peduncle*', 55 'Petiole Expansion*', 56 'Post Petiole Face*', 57 'Petiole Fusion*', 58 'Helcium*', 59 'Third Abd Segment*', 60 'Sternal Abd Projection*', 61 Keel_flat_face, 62 'Constriction bt abd 3 and 4*', 63 'Abd seg fusion*', 64 'Sting*', 65 'Acidopore*' ; MATRIX Metapolybia_cingulata 0000010000-1(1 2)120--0100--00-010---01000-001002010000011100100?0110 Scolia_verticalis 0000010000-0(1 3)120--0100--00-010---010?0-000002011000011110100?0110 Chalybion_californicum 0000010000-0(1 2)120--0100--00-010---010-0-0011120111000100-0000?0110 Heterogyna 0000010000-0(1 3)120--0100--00-010---01010-00111101110000-----00?0110 Martialis_heureka 1000101110-2(1 2)000----00--00-0-0---010010001001111000011100100?1010 Leptanilla_swani 1000000100-2(1 2)000----00--00-0-0---010011001011200000010200011?0010 Anomalomyrma_sp 1001000100-2(1 2)000----00--00-0-0---010011001011100001010210011?0210 Apomyrma_stygia 1001000100-2(1 2)001----00--00-0-0---010010001011200000011200000?0310 Opamyrma_hungvuong 1001000100-2(1 2)001----00--00-0-0---010010001011210000011200100?0010 Amblyopone_pallipes 101000011212(1 2)020--0000-000-000---010010001001110011111110100?1010 Tatuidris_tatusia 1000101000-27020--0000--00-000---010011001000200000010210010?1010 Paraponera_clavata 100001001102(1 2)020--0000--10-000---010110001002110111111200100?1010 Proceratium_stictum 100000010102(1 2)010--0000--00-0-0---01001?001002210001011210000?1010 Platythyrea_punctata 100001002112(1 2)020--0000--10-000---01011?001001210201010211000?1110 Leptogenys_diminuta 100001002112(1 2)020--0000--10-000---01011?001011110201011201001?1110 Hypoponera_opacior 100001002112(1 2)020--0000--10-000---01001?001011110200001201000?1110 Cerapachys_sexspinus 100000010102(1 2)000----00--10-0-0---010011001?00200011010200100?0010 Leptanilloides_nomada 100000001002(1 2)000----00--10-0-0---010011001000200001110200010?0010 Myrmecia_nigrisceps 100001011102(1 2)120--1000--10-000---010111001012110101011101101?1110 Nothomyrmecia_macrops 100001011102(1 2)020--0000--10-000---010111001012110101011101101?0110 Tetraponera_punctata 100000001102(1 2)020--0000--10-000---010011001011110101011101100?0110 Aneuretus 1000010100-2(1 2)020--0000--10-010---100010001012110000011101100?0010 Lasius_californicus 1000010000-2(1 2)020--0000--10-000---010010001012110000010300000?0001 Formica_fusca 1000010000-2(1 2)020--0000--10-010---010110001012110000010300000?0001 Kyromyrma 1000010000-2(1 2)020--0000--10-000---01001000101211000??10?00000?0001 Pogonomyrmex_californicus 100001010202(1 2)020--0000--10-000---010110001012210000011100110?0010 Myrmica_americana 100001010202(1 2)020--0000--10-000---010010001012110001011100110?0010 Acanthoponera_minor 100001010202(1 2)020--0000--10-000---010010001002100101011201100?1010 Gerontoformica_magnus 1010010000-1(1 2)121--0100-120-000---01001000101101110??1110110100110 Gerontoformica_gracilis 1010010000-1(1 2)121--0000-120-000---01001000101101110011110110100110 Gerontoformica_pilosus 1010010000-1(1 2)121--0000-120-000---01001000101101110011110110101110 Gerontoformica_spiralis 1010010000-1(1 2)121--0000-120-000---01001000101101110011110110100110 Sphecomyrma_freyi 1000010000-1(1 2)121--0000--00-000---010010001011011100?1110?100?0110 Zigrasimecia 1011010010-1(1 2)021--0000-100-000---110110001012011101111100100?0110 Myanmyrma_gracilis 1011?1???0-1(1 2)??1--0?00-1?0-0?0---1100100010?101110??1110110??1110 Camelomecia 100001001301(1 2)120--0000--00-010---110010001011?11101011101101??110 Brownimecia_clavata 10??010??0-2(1 2)020--0000--00-000---?1001000101211010??1110?100?1110 Haidomyrmex_scimitarus 0100110000-1(1 2)020100110--01010110-110010001011011100011101100-0110 Haidomyrmodes_mammuthus 0100?1?000-1(1 2)120100110--01010110-110??000101101?10001110?100-0110 Haidoterminus_cippus 0100110000-2(1 2)020100110--01010110-110010001011011100011101100-0110 Ceratomyrmex 0100110010-1(1 2)120100110--01110101111011000101101110101110110100110 Protoceratomyrmex 0100010010-1(1 2)020100110--01010101011001000101101110001110110101110 Linguamyrmex 0100110000-1(1 2)120100110--01110101111011000101101110001110110101110 Dhagnathos 0100111100-1(1 2)?201100011-00-01100-101110111011?1110111110110111110 Chonidris 0100010000-???201100011-00-01100-101110111011?1110111110110111110 Aquilomyrmex 0100111010-2(1 2)?200011010-00-00100-11111001101??11100011101100-1110 ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 65; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1- 65; END; BEGIN TREES; Title 'Parsimony_ImpliedWeights_UnconstrainedTopology'; ID 016d835c14aa1; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE tagged_tree = (1,(2,((3,4)[%bootstrapFrequency = 70 ],(((36,(37,(((12,(28,((10,(5,(13,((17,((6,7)[%bootstrapFrequency = 48 ],(11,18)[%bootstrapFrequency = 29 ])[%bootstrapFrequency = 44 ])[%bootstrapFrequency = 38 ],(8,9)[%bootstrapFrequency = 64 ])[%bootstrapFrequency = 15 ])[%bootstrapFrequency = 39 ])[%bootstrapFrequency = 30 ])[%bootstrapFrequency = 39 ],((22,(23,24,25)[%bootstrapFrequency = 97 ])[%bootstrapFrequency = 4 ],(26,27)[%bootstrapFrequency = 71 ])[%bootstrapFrequency = 22 ])[%bootstrapFrequency = 21 ])[%bootstrapFrequency = 8 ])[%bootstrapFrequency = 35 ],(16,(14,15)[%bootstrapFrequency = 36 ])[%bootstrapFrequency = 84 ])[%bootstrapFrequency = 12 ],(21,(19,20)[%bootstrapFrequency = 78 ])[%bootstrapFrequency = 35 ])[%bootstrapFrequency = 43 ])[%bootstrapFrequency = 71 ])[%bootstrapFrequency = 11 ],(33,((29,30,31,32)[%bootstrapFrequency = 63 ],(34,35)[%bootstrapFrequency = 71 ])[%bootstrapFrequency = 51 ])[%bootstrapFrequency = 46 ])[%bootstrapFrequency = 59 ],(((39,(38,40)[%bootstrapFrequency = 38 ])[%bootstrapFrequency = 77 ],(42,(41,43)[%bootstrapFrequency = 63 ])[%bootstrapFrequency = 77 ])[%bootstrapFrequency = 97 ],(46,(44,45)[%bootstrapFrequency = 97 ])[%bootstrapFrequency = 95 ])[%bootstrapFrequency = 92 ])[%bootstrapFrequency = 91 ])[%bootstrapFrequency = 65 ])[%bootstrapFrequency = 100 ]); TREE tnt_1 = (1,(2,((3,4),(((36,(37,(((12,(28,((10,(5,(13,((17,((6,7),(11,18))),(8,9))))),((22,(23,24,25)),(26,27))))),(16,(14,15))),(21,(19,20))))),(33,((29,30,31,32),(34,35)))),(((39,(38,40)),(42,(41,43))),(46,(44,45))))))); END; BEGIN TREES; Title 'Parsimony_ImpliedWeights_ConstrainedTopology'; ID 016d835cbaf03; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE tagged_tree = (1,((2,(3,4)[%bootstrapFrequency = 70 ])[%bootstrapFrequency = 38 ],((36,(37,((5,(9,(6,7)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],(((8,10)[%bootstrapFrequency = 100 ],(13,((11,12)[%bootstrapFrequency = 100 ],(14,(15,16)[%bootstrapFrequency = 59 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((17,18)[%bootstrapFrequency = 100 ],((22,(21,(19,20)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((23,24,25)[%bootstrapFrequency = 100 ],(28,(26,27)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 92 ],(33,((29,30,31,32)[%bootstrapFrequency = 66 ],(34,35)[%bootstrapFrequency = 72 ])[%bootstrapFrequency = 62 ])[%bootstrapFrequency = 56 ])[%bootstrapFrequency = 61 ],(((39,(38,40)[%bootstrapFrequency = 42 ])[%bootstrapFrequency = 74 ],(42,(41,43)[%bootstrapFrequency = 60 ])[%bootstrapFrequency = 74 ])[%bootstrapFrequency = 97 ],(46,(44,45)[%bootstrapFrequency = 98 ])[%bootstrapFrequency = 97 ])[%bootstrapFrequency = 93 ])[%bootstrapFrequency = 82 ])[%bootstrapFrequency = 100 ]); TREE tnt_1 = (1,((2,(3,4)),((36,(37,((5,(9,(6,7))),(((8,10),(13,((11,12),(14,(15,16))))),((17,18),((22,(21,(19,20))),((23,24,25),(28,(26,27)))))))),(33,((29,30,31,32),(34,35)))),(((39,(38,40)),(42,(41,43))),(46,(44,45)))))); END; BEGIN TREES; Title 'Parsimony_EqualWeights_ConstrainedTopology'; ID 016d835cf11f4; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE tagged_tree = (1,(2,((3,4)[%bootstrapFrequency = 56 ],((37,((5,(9,(6,7)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],(((8,10)[%bootstrapFrequency = 100 ],(13,((11,12)[%bootstrapFrequency = 100 ],(14,15,16)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((17,18)[%bootstrapFrequency = 100 ],((22,(21,(19,20)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((23,24,25)[%bootstrapFrequency = 100 ],(28,(26,27)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 75 ],(33,36,(29,30,31,32)[%bootstrapFrequency = 42 ],(34,35)[%bootstrapFrequency = 36 ],(((39,(38,40)[%bootstrapFrequency = 38 ])[%bootstrapFrequency = 66 ],(42,(41,43)[%bootstrapFrequency = 29 ])[%bootstrapFrequency = 49 ])[%bootstrapFrequency = 64 ],(46,(44,45)[%bootstrapFrequency = 99 ])[%bootstrapFrequency = 80 ])[%bootstrapFrequency = 76 ])[%bootstrapFrequency = 15 ])[%bootstrapFrequency = 77 ])[%bootstrapFrequency = 47 ])[%bootstrapFrequency = 100 ]); TREE tnt_1 = (1,(2,((3,4),((37,((5,(9,(6,7))),(((8,10),(13,((11,12),(14,15,16)))),((17,18),((22,(21,(19,20))),((23,24,25),(28,(26,27)))))))),(33,36,(29,30,31,32),(34,35),(((39,(38,40)),(42,(41,43))),(46,(44,45)))))))); END; BEGIN TREES; Title 'Parsimony_EqualWeights_ConstrainedTopology'; ID 016d835d4b705; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE tagged_tree = (1,(2,((3,4)[%bootstrapFrequency = 56 ],((37,((5,(9,(6,7)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],(((8,10)[%bootstrapFrequency = 100 ],(13,((11,12)[%bootstrapFrequency = 100 ],(14,15,16)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((17,18)[%bootstrapFrequency = 100 ],((22,(21,(19,20)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ],((23,24,25)[%bootstrapFrequency = 100 ],(28,(26,27)[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 100 ])[%bootstrapFrequency = 75 ],(33,36,(29,30,31,32)[%bootstrapFrequency = 42 ],(34,35)[%bootstrapFrequency = 36 ],(((39,(38,40)[%bootstrapFrequency = 38 ])[%bootstrapFrequency = 66 ],(42,(41,43)[%bootstrapFrequency = 29 ])[%bootstrapFrequency = 49 ])[%bootstrapFrequency = 64 ],(46,(44,45)[%bootstrapFrequency = 99 ])[%bootstrapFrequency = 80 ])[%bootstrapFrequency = 76 ])[%bootstrapFrequency = 15 ])[%bootstrapFrequency = 77 ])[%bootstrapFrequency = 47 ])[%bootstrapFrequency = 100 ]); TREE tnt_1 = (1,(2,((3,4),((37,((5,(9,(6,7))),(((8,10),(13,((11,12),(14,15,16)))),((17,18),((22,(21,(19,20))),((23,24,25),(28,(26,27)))))))),(33,36,(29,30,31,32),(34,35),(((39,(38,40)),(42,(41,43))),(46,(44,45)))))))); END; BEGIN TREES; Title 'Bayesian_MrBayes_UnconstrainedTopology'; ID 016d83606ff311; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE con_50_majrule = (1:0.03051937,2:0.04063135,((3:0.02145589,4:0.04158294):0.08975571,(((((((5:0.08496924,(((6:0.01632697,7:0.08168921):0.03685086,11:0.1045703,(17:0.0789338,18:0.05499255):0.0490984):0.08063767,(8:0.0404885,9:0.0191888):0.05892617,13:0.09139736):0.07060179,10:0.1286378):0.07918177,22:0.06565724,(23:0.009531413,24:0.03416833,25:0.01008739):0.1065191,(26:0.04250815,27:0.01648921):0.0374272):0.05498363,(12:0.09102492,28:0.04989479):0.05461272):0.05085325,((14:0.07018193,15:0.01903557,16:0.04811999):0.1080931,(19:0.04577398,20:0.01394971):0.03926459,21:0.04646925):0.0648621):0.04132198,37:0.01871515):0.1108302,(((29:0.02274855,30:0.008943016,31:0.01901779,32:0.009129643):0.03953459,(34:0.09426574,35:0.02686381):0.0675154):0.04558892,33:0.01327401):0.04070173,36:0.07090913):0.04822356,((((38:0.008892518,40:0.02060933):0.01871548,39:0.01483485):0.05501456,(41:0.03195133,43:0.01755809):0.04434404,42:0.05089549):0.0789127,((44:0.02771163,45:0.02795723):0.1503445,46:0.09871042):0.113851):0.09612464):0.1146077):0.04407953); END; BEGIN TREES; Title 'Bayesian_MrBayes_ConstrainedTopology'; ID 016d83611ac813; LINK Taxa = Taxa; TRANSLATE [0] 1 Metapolybia_cingulata, [1] 2 Scolia_verticalis, [2] 3 Chalybion_californicum, [3] 4 Heterogyna, [4] 5 Martialis_heureka, [5] 6 Leptanilla_swani, [6] 7 Anomalomyrma_sp, [7] 8 Apomyrma_stygia, [8] 9 Opamyrma_hungvuong, [9] 10 Amblyopone_pallipes, [10] 11 Tatuidris_tatusia, [11] 12 Paraponera_clavata, [12] 13 Proceratium_stictum, [13] 14 Platythyrea_punctata, [14] 15 Leptogenys_diminuta, [15] 16 Hypoponera_opacior, [16] 17 Cerapachys_sexspinus, [17] 18 Leptanilloides_nomada, [18] 19 Myrmecia_nigrisceps, [19] 20 Nothomyrmecia_macrops, [20] 21 Tetraponera_punctata, [21] 22 Aneuretus, [22] 23 Lasius_californicus, [23] 24 Formica_fusca, [24] 25 Kyromyrma, [25] 26 Pogonomyrmex_californicus, [26] 27 Myrmica_americana, [27] 28 Acanthoponera_minor, [28] 29 Gerontoformica_magnus, [29] 30 Gerontoformica_gracilis, [30] 31 Gerontoformica_pilosus, [31] 32 Gerontoformica_spiralis, [32] 33 Sphecomyrma_freyi, [33] 34 Zigrasimecia, [34] 35 Myanmyrma_gracilis, [35] 36 Camelomecia, [36] 37 Brownimecia_clavata, [37] 38 Haidomyrmex_scimitarus, [38] 39 Haidomyrmodes_mammuthus, [39] 40 Haidoterminus_cippus, [40] 41 Ceratomyrmex, [41] 42 Protoceratomyrmex, [42] 43 Linguamyrmex, [43] 44 Dhagnathos, [44] 45 Chonidris, [45] 46 Aquilomyrmex; TREE con_50_majrule = (1:0.02374037,((((5:0.1007226,((6:0.01497096,7:0.06762075):0.09189762,9:0.03299364):0.02954748):0.02732121,(((8:0.1219846,10:0.1547719):0.01635045,(((11:0.1645833,12:0.1257043):0.01610105,(14:0.03419036,(15:0.01969847,16:0.04267333):0.0389224):0.1299669):0.03606791,13:0.03721578):0.05744069):0.02152486,((17:0.03854117,18:0.07397369):0.1180744,((((19:0.04279148,20:0.008936076):0.02666013,21:0.04716824):0.09779443,22:0.05361762):0.01774163,((23:0.007765145,24:0.02927935,25:0.008364458):0.09618414,((26:0.03910464,27:0.01049296):0.02163339,28:0.08640684):0.02262283):0.01011587):0.04076242):0.02996242):0.01361664):0.08518383,37:0.02428284):0.08570809,(((29:0.01904834,30:0.007568054,31:0.01569133,32:0.007510784):0.03507648,(34:0.07962042,35:0.02342762):0.05782349):0.03957229,33:0.01044907):0.03332597,36:0.06579547,((((38:0.007476165,40:0.01731773):0.01500242,39:0.0120801):0.04603609,((41:0.027041,43:0.01398876):0.03605454,42:0.04120777):0.04250289):0.06610893,((44:0.02403928,45:0.02319209):0.1324589,46:0.08398363):0.09707604):0.08366697):0.09535102,(2:0.0330499,(3:0.01675914,4:0.03593772):0.07889554):0.0341147); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1569867443528; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4788430007599628386; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5262864977536961198; tell It; setDefaultOrder 0 1 2 3 5 4 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 32 26 27 29 28 30 31 33 34 35 36 46 37 38 39 40 41 42 43 44 45 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64; attachments ; endTell; mqVersion 350; checksumv 0 3 271640717 null getNumChars 65 numChars 65 getNumTaxa 46 numTaxa 46 short true bits 143 states 143 sumSquaresStatesOnly 25352.0 sumSquares 25352.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 241; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1926 1256; setLocation 4 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4788430007599628386 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 5; setTreeBlockID 016d83606ff311; toggleUseWeights off; endTell; setAssignedID 1115.1569867217048.6571394235402437133; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1685 1184; setLocation 4 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #4788430007599628386 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 6; setTreeBlockID 016d83611ac813; toggleUseWeights off; endTell; setAssignedID 1146.1569867258532.2017425540422859785; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1685 1184; setLocation 4 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5262864977536961198 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1685 1184; setLocation 4 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; endTell; end;