#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=27; TAXLABELS 'Phialophora cyclaminis NR_145368_CBS_166.42' 'Coniochaeta polymorpha NR_121473_CBS_132722' 'Coniochaeta decumbens NR_144912_CBS_153.42' Coniochaeta_sp._CSN654_ITS4_CS022 'Coniochaeta savoryi GQ922522_CBS_415.73' 'Coniochaeta savoryi KU325432_P8_E7_68' 'Coniochaeta gigantospora NR_121521_ILLS_60816' 'Coniochaeta prunicola NR_137037_CBS_120875' 'Coniochaeta ligniaria KX394783_Fan_Guo_1302309' 'Coniochaeta ligniaria FN394684_3836' 'Coniochaeta ligniaria AY198390_C8' 'Coniochaeta lignicola NR_111520_CBS_267.33' 'Coniochaeta velutina GPMM2016_ITS1' 'Coniochaeta mutabilis NR_111519_CBS_157.44' 'Coniochaeta velutina GQ154542_CBS_120874' 'Coniochaeta velutina GQ154544_CBS_121444' 'Coniochaeta velutina GPMM2036_ITS1' 'Coniochaeta luteoviridis DQ404354_64' 'Coniochaeta luteoviridis AB190401_IFM_50534' 'Coniochaeta africana NR_137725_CBS_120868' 'Coniochaeta fasciculata HE610336_CBS_205.38' 'Coniochaeta luteorubra HE610330_UTHSC_01_20_1' 'Coniochaeta hoffmannii NR_111518_CBS_245.38' 'Coniochaeta cateniformis NR_111517_UTHSC_01_1644' 'Coniochaeta canina NR_120211_UTHSC_11_2460' 'Rhodoveronaea varioseptata NR_136990_CBS_431.88' 'Myrmecridium flexuosum NR_146238_CBS_398.76' ; END; BEGIN CHARACTERS; TITLE 'Coniochaeta - ITS alignment'; DIMENSIONS NCHAR=528; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Phialophora cyclaminis NR_145368_CBS_166.42' G--CGAG-----TATAACTCTCTAAAACCATTGTGAACGAACAGACC----GGTTGCTTCGGC-GG--------------------------------------------------------ACGGCTTGCCGCCGCCGG-AAGAACTCAAACTCT----TGTTATCATTGTCTCTCTGAGT-AAATTACTT-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCCA----GGCTTGTGTTGGGGG-CCTGCAGCTGCTGCAGCCCCCTAAAAGCAGTGGCGG-ACTCGCTGT-CATTCCGAGCGCAGTAGTT--ACATCTCGCTCTGGACGTGGCGGC-GGGCACCTGC-CGTGAAACA----CTCTTTCT---AAGG 'Coniochaeta polymorpha NR_121473_CBS_132722' C--AGAGTTCT-AAAAAGACTCCCAAACCATTGTGAACGTTACCCGTAACATGTTGCCTCGGC-GG----GCGGCCCCTCC---CTGGGGCCGCTG-CCTCCTC-------------------CGGGGGGTGCCCGCCGG-AGCGCCAAAAACTATTCTGTATTCTAGTGGCCTCTCTGAGA-AAACAAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCCAG---GCTTGGTGTTGGGGT-CCTACGGCTGCCGTAGGCCCTGAAAGAAAGTGGCGG-GCTCGCTATCGACTCCGAGCGTAGTAGTAACATATCTCGCTAGGGAGG-CGTCGC-GGGTTCCGGC-CGTGAAAG-CCCCATCTTTTACACAAGG 'Coniochaeta decumbens NR_144912_CBS_153.42' C--AGAGTTCT-AAAAGACTCCCAAAACCATTGTGAACGTACCCGTCAG--CGTTGCCTCGGC-GG----GCGGCCCCTCC---CTGGGGCCGCTG-CCTCCCT-------------------CGGGGGGTGCCCGCCGG-CGTACC-AAAACTCTTTTGTATTTTAGTGGCCTCTCTGAGA-AAACAAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGT-CCTACGGCTGCCGTAGGCCCTGAAAGCTAGTGGCGG-GCTCGCTAT-AACTCCGAGCGTAGTAGTAAAATATCTCGCTAGGGAGG-TGTCGC-GGGTTCCGGC-CGTGAAAG--CCCATCTTTTACACAA-- Coniochaeta_sp._CSN654_ITS4_CS022 C--AGAGTTCTAAAAAGACTCCCAAAACCATTGTGAACGTACCCGTCAG--CGTTGCCTCGGCGGG----GCGGCCCCTCC---CTGGGGCCGCTG-CCTCCCT-------------------CGGGGGGTGCCCGCCGG-CGTACC-AAAACTCTTTTGTATTTTAGTGGCCTCTCTGAGA-AAACAAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCC-----GCTTGGTGTTGGGGT-CCTACGGCTGCCGTAGGCCCTGAAAGCTAGTGGCGG-GCTCGCTAT-AACTCCGAGCGTAGTAGTAAAATATCTCGCTAGGGAGG-TGTCGC-GGGTTCCGGC-CGTGAAAG--CCCATCTTTTACACAAGG 'Coniochaeta savoryi GQ922522_CBS_415.73' C--AGAGTTCTAAAAAGACTCCCAAAACCATTGTGAACGCACCGTTAGA--CGTTGCCTCGGC-GG----GCGGCCCCTCC---CTGGGGCCGCTG-CCTCCCTC-----------------GCGGGGGGTGCCCGCCGG-CGTACC-AAAACTCTTTTGTATTTTAGTGGCCTCTCTGAGA-AAACAAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCC-----GCTTGGTGTTGGGGT-CCTACGGCTGCCGTAGGCCCTGAAAGCTAGTGGCGG-GCTCGCTAT-AACTCCGAGCGTAGTAGTAAAATATCTCGCTAGGGAGG-TGTCGC-GGGTTCCGGC-CGTGAAAG-CCCCATCTTTTACACAAGG 'Coniochaeta savoryi KU325432_P8_E7_68' A-----------------------------------------------------------------------GTTCCGTAG---GTGGGGCTGCGG-ATCCCT--------------------TGTCGATAGGCGGAGGA-AGAATC-CGAACTCTTTTGTGTTTTAGTGGCCTCTCAGAGA-AAACAAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTACTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGT-CCTACGGCTGCCGTAGGCCCTGAAAGCTAGTGGCGG-GCTCGCTAT-AACTCCGAGCGTAGTAGTAAAATATCTCGCTAGGGAAGGTGTCGCGGGGTTCCGGCCCGTGAAAG--CCCATCTTTTACACAAGG 'Coniochaeta gigantospora NR_121521_ILLS_60816' ----AAGAGTTGCGAGACTCCC--AGACCATTGTGAACCTATCCTTCAG--TGTTGCTTCGGC-GG----GCGTCCCCGGG---GAGGGGACGCAG-CCCAAGGCCCCGAAA------AGGGGCGGCGGGCGCCCGCCGG-AGGTACCAAAACCCTTCTGTATTATAGTGGCACTTCTGAGT-AAACAAGCACAATAAGTCAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTGGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAAGAAGTGGCGG-GCTCGCTAT-AACTCCGAGCGCAGTAG--AAATATCTCGCTAGGGAAG-TGTGGC-GTGCTCCGGC-CGTTAAAGA-CCCATCTTTAACC-AAGG 'Coniochaeta prunicola NR_137037_CBS_120875' C--AAGAAGCCGAAAGGCTACTTCAAACCATCGTGAACTTATCCA------AGTTGCTTCGGC-GG-CGCGGCT-CCCCTCGC-GGGGTGCCGCAG-CCCCGCCCCCTC---------GGGGGTGGTGGGCGCCCGCCGG-AGGTAT-TAAACTCTCCTGTATTATAGTGGTATTTCTGAGT--AA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAAGAAGTGGCGG-GCTCGCTGC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGG-CGCGGCGGTGCTCCTGC-CGTTAAAGA--CCATCTTTAACCAAAGG 'Coniochaeta ligniaria KX394783_Fan_Guo_1302309' C--AAGAAGCCGAGAGGCTACTTCAAACCATCGCGAACCCGTCCA------AGTTGCTTCGGC-GG-CGCGGCATCCCGTCACCGGGGCGCCGCAG-CCCGGCCTCTCC---------GGAGGTGCGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAGCA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGTAGTACTCTACCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGG-TGCGGC-GTGCTCCTGC-CGTTAAAGACCCCATCTT-AAC-CAATG 'Coniochaeta ligniaria FN394684_3836' C--AAGAAGCCGAAAGGCTACTTCAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-CGCGGCACCCCTTAACGGGGGCGCCGCAG-CCCTGCCTCTCC---------GGAGGTTCGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-ATA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGTAGTACTCTACCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGGTTGCGGC-GTGCTCCTGC-CGTTAAAGA-CCCATCTTTAAC-CAAGG 'Coniochaeta ligniaria AY198390_C8' C--AAGAAGCCGAAAGGCTACTTCAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-CGCGGCACCCCTTAACGGGGGCGCCGCAG-CCCTGCCTCTCC---------GGAGGTTCGGGGCGCCCGCCGGCAGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-ATA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGTAGTACTCTACCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGGTTGCGGC-GTGCTCCTGC-CGTTAAAGA-CCCATCTTTAAC-CAAGG 'Coniochaeta lignicola NR_111520_CBS_267.33' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCATCCA------AGTTGCTTCGGC-GG-CGCGGCG-CCCCTCAC-GGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGATGTTGCGGC-GTGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAA-- 'Coniochaeta velutina GPMM2016_ITS1' ------------------------------TCGCGAACTCGTCCT------AGTTGCTTCGGC-GG-CGCGGCG-TCCCTCAC-GGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGCGTCGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GTGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta mutabilis NR_111519_CBS_157.44' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCGTCCT------AGTTGCTTCGGC-GG-CGCGGCG-TCCCTCAC-GGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGCGTTGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGTAAAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GTGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAA-- 'Coniochaeta velutina GQ154542_CBS_120874' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-CGCGGCC-TCCCTCACGGGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GCGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta velutina GQ154544_CBS_121444' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-CGCGGCC-TCCCTCACGGGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GCGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta velutina GPMM2036_ITS1' ------------------------------TCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-CGCGGCC-TCCCTCACGGGGGCGCCGCAG-CCCCGCCTCTCC---------GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GCGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta luteoviridis DQ404354_64' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCATCCA------AGTTGCTTCGGC-GGTTGCGGCGTTCCCTCAC-GGGGCGCCGCGG-CCCCGCCTCTCC---------GGAGGTGT-GGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACG-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCA-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GTGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta luteoviridis AB190401_IFM_50534' T--TAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCATCCA------AGTTGCTTCGGC-GGTTGCGGCGTTCCCTCAC-GGGGCGCCGCCT-CCCCGCCTCTCC---------GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGCATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCA-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGACGTTGCGGC-GTGCTCCTGC-CGTTAAAGA--CCATCTTTAACTCAAGG 'Coniochaeta africana NR_137725_CBS_120868' C--AAGAAGCCGAAAGGCTACTTACAACCATCGCGAACTTATCCA------AGTTGCTTCGGC-GG-CGCGGCGTGCCCTCACGGGGGCGCCGCAG-CCCGGCCTCTCA---------GGGGGCGCGGGGCACCCGCCGG-AGGTAC-GAAACTCT--TGTCTCATAGTGGTATCTCTGAGT-AAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGG-CGTGGC-GTGCTCCGGC-CGTTAAAGACCCCATCTTTAAC-CAAGG 'Coniochaeta fasciculata HE610336_CBS_205.38' C--AAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCATCCA------AGTTGCTTCGGC-GG-CGCGGCT-CCCCTCAC-GGGGGACCGCAGCCCCCGCCTCTCA---------GGAGGTAAGGGGCAGCCGCCGG-AGGTAC-GAAACTC---TGTATTATAGTGGTATCTCTGAGT-ATA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTACTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCT-----GCTTGGTGTTGGGGC-TCTACGTCTGACGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAAG-TGTGGC-GTTCTCCAGC-CGTTAAAGACCCCATCTTTAAC-CAA-- 'Coniochaeta luteorubra HE610330_UTHSC_01_20_1' A--AAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-TGCGGGAGCCCTTCACCGGGCCGCCGCGG-CCCTCCGCCCCCGGGAGACC-GGAGGTGTGGGGCGCCCGCCGG-AGGTAC-GAAACTCTCATGTCTTACAGTGGAATCTCTGAGT-ACA-AAGCA-AATAAGTTAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGCAGTACTCTGCCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCC-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAACTCACTGTCTCGCTAGGGAGGTTGCGGC-GCGCTCCTGC-CGTTAAAGACCCCATCTTTAAC-CAA-- 'Coniochaeta hoffmannii NR_111518_CBS_245.38' A--AAGAAGCCGAAAGGCTACTTAAAACCATCGCGAACACGTCCA------AGTTGCTTCGGC-GG-CGCGGGGCCCCTTCCC-GGGGCGCCGCTG-CCCTCCGCCCCCGGGTCTCCGGGAGGTGCGGGGCGCCCGCCGG-AGGTAC-GAAACTCTTATGTATCACAGTGGCATCTCTGAGT-GAA-AAACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGCAGTACTCTGCCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGC-CCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGG-GCTCGCTGC-AACTCCGAGCGTAGTAACTCATTATCTCGCTAGGGACGTTGCGGC-GCGCTCCTGC-CGTTAAAGAACCCATCTTTAAC-CAA-- 'Coniochaeta cateniformis NR_111517_UTHSC_01_1644' C--AAGAAGCCGAAAGGCTACTTCAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-TGCGGCTTCCCCCC---GGGGTGCCGCGG-CGCCGCGCCCCC---------CGGGGCGCGGGGCGCCCGCCGG-AGGTCT-CAAACTCTTATGGATTATAGTGGTATCTCTGAGT-AAA-ACACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGCAGTACTCTGCCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGT-CCCACGGCCGCCGTGGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCTGTTTCTCGCTTAGGGCGTTGGGCG-GCGCTCCAGC-CGTTAAAGTACCCATCTTTAACTCAA-- 'Coniochaeta canina NR_120211_UTHSC_11_2460' C--AAGAAGCCGAAAGGCTACTTCAAACCATCGCGAACTCGTCCA------AGTTGCTTCGGC-GG-TGCGGCGTCCCCAC---GGGGGCCCGCGG-CGCCGCGCCTCC-------CCGGAGGCGCGGGGCGCCCGCCGG-AGGTCA-CAAACTCTCATGCATTATAGTGGTATCTCTGAGT-AAA-ACACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGGCAGTACTCTGCCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCT-----GCTTGGTGTTGGGGT-CCCACGGCCGCCGTGGGCCCTGAAAGGAAGTGGCGG-GCTCGCTAC-AACTCCGAGCGTAGTAATTCATTATCTCGCTTAGGGCGTTGGGCG-GCGCTCCTGC-CGTTAAAGAA-CCATCTTTAACTCAAGG 'Rhodoveronaea varioseptata NR_136990_CBS_431.88' AAAAGAGAGTTTAACAACTCCT--CAACCCTTGTGAATATACCTAAAT---CGTTGCTTCGGC-GG----GCAGCCCCAGG---GCGGGGCCGCAG-CCT--------------------GCCTAGCAGGTGCCCGCCGA-AAGCGC-CACAAACTCTTGTTTTATAGT---ATCTCTGAGT-CTAAACACA-AATAAGTTAAAACTTTCAACAACGGATCTCTTGGCTTTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCACTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAGGCCCTCGGCTGCCTGGCGTTGGGGCACCTACGGCGTACGTAGGCCCCGAAAAATAGTGGCGGTGCTCGCCAG-CACTCCGGGCGCAGTAGTTT-CCTTCTCGCCTAGGACG-TCTGGTGATCTATCAGC-CGTTAAACCA-CCAA-TTTAAC-AAAGG 'Myrmecridium flexuosum NR_146238_CBS_398.76' ---CGAGAGTGTCACCACTCCC--AACCCATTGTTTACCTACCCGTCCA--CCGTGCTTCGGC-AG----GCAGCCCTGTG-------GGACAGAG-CCTCGCCCCCCT------------CGCGGGGGGTGCCTGCCGC-TGGCCA-ACCAATACTCTAGCTGTTTTTGTACAATCTGAGT-CTT-CCACA-AATGAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCTG-----GCTTGGTGTTGGGGC-TCTGCGCCACGCGCAGTCCCTGAAATTCAGTGGCGG-ACACGCTAG-GTCTCCGAGCGCAGTAGTT--TCTTCTCGCTTCGGGCG-TCCGGC-GTGGGCTTGC-CTCGCAC---CCCACT-----CTCAAGG ; END; BEGIN TREES; Title 'Coniochaeta - ITS phylogeny'; LINK Taxa = Taxa; TRANSLATE [0] 1 'Phialophora cyclaminis NR_145368_CBS_166.42', [1] 2 'Coniochaeta polymorpha NR_121473_CBS_132722', [2] 3 'Coniochaeta decumbens NR_144912_CBS_153.42', [3] 4 Coniochaeta_sp._CSN654_ITS4_CS022, [4] 5 'Coniochaeta savoryi GQ922522_CBS_415.73', [5] 6 'Coniochaeta savoryi KU325432_P8_E7_68', [6] 7 'Coniochaeta gigantospora NR_121521_ILLS_60816', [7] 8 'Coniochaeta prunicola NR_137037_CBS_120875', [8] 9 'Coniochaeta ligniaria KX394783_Fan_Guo_1302309', [9] 10 'Coniochaeta ligniaria FN394684_3836', [10] 11 'Coniochaeta ligniaria AY198390_C8', [11] 12 'Coniochaeta lignicola NR_111520_CBS_267.33', [12] 13 'Coniochaeta velutina GPMM2016_ITS1', [13] 14 'Coniochaeta mutabilis NR_111519_CBS_157.44', [14] 15 'Coniochaeta velutina GQ154542_CBS_120874', [15] 16 'Coniochaeta velutina GQ154544_CBS_121444', [16] 17 'Coniochaeta velutina GPMM2036_ITS1', [17] 18 'Coniochaeta luteoviridis DQ404354_64', [18] 19 'Coniochaeta luteoviridis AB190401_IFM_50534', [19] 20 'Coniochaeta africana NR_137725_CBS_120868', [20] 21 'Coniochaeta fasciculata HE610336_CBS_205.38', [21] 22 'Coniochaeta luteorubra HE610330_UTHSC_01_20_1', [22] 23 'Coniochaeta hoffmannii NR_111518_CBS_245.38', [23] 24 'Coniochaeta cateniformis NR_111517_UTHSC_01_1644', [24] 25 'Coniochaeta canina NR_120211_UTHSC_11_2460', [25] 26 'Rhodoveronaea varioseptata NR_136990_CBS_431.88', [26] 27 'Myrmecridium flexuosum NR_146238_CBS_398.76'; TREE Imported_tree_1 = ((26:0.30231895,27:0.59614018)70:0.08317754,((1:0.40752221,(6:0.13836404,(3:0.00001986,(4:0.00001546,(2:0.09219701,5:0.01498145):0.00535547)30:0.00335568)25:0.03362055)67:0.13091143)100:0.03274279,(7:0.09195031,(8:0.03074684,((20:0.03410281,21:0.05197198)56:0.01368737,(((9:0.02370357,(10:0.0,11:0.0)100:0.0153197)41:0.00410655,((22:0.05452434,23:0.03553)90:0.0289248,(24:0.04385537,25:0.00964027)100:0.0914284)76:0.0244672)82:0.01888533,(12:0.00004464,((18:0.00533175,19:0.00539689)87:0.00899849,((13:0.00008008,14:0.00321215)94:0.00997657,(15:0.0000065,(16:0.00002029,17:0.0)19:0.0000065)89:0.00656849)58:0.00329892)58:0.00648507)77:0.01367762)46:0.00081141)82:0.05044145)99:0.12654363)51:0.03009214)39:0.08317754)[% ] [% ] [% setBetweenBits = selected ]; END;