#NEXUS BEGIN TAXA; TITLE Lembosiniella; DIMENSIONS NTAX=26; TAXLABELS 'Elsinoe flacourtiae NR_148141_CBS_474.62' 'Elsinoe pitangae NR_148162_CBS_227.50' 'Elsinoe perseae NR_148160_CBS_406.34' 'Elsinoe hederae NR_148146_CBS_517.50' 'Elsinoe arachidis NR_148125_CBS_511.50' 'Elsinoe barleriicola NR_148128_CBS_471.62' 'Elsinoe proteae NR_132796_STE_U_1349' 'Elsinoe eucalyptorum NR_155080_CBS_120084' 'Elsinoe oleae NR_148159_CBS_227.59' 'Elsinoe rosarum NR_148167_CBS_212.33' 'Elsinoe jasminicola NR_148149_CBS_212.63' 'Elsinoe quercus ilicis_NR_148164_CBS_232.61' 'Elsinoe eucalyptigena NR_155099_CPC_29529' 'Elsinoe banksiigena NR_159837_CPC_32402' 'Myriangium citri KU720543_MAsS1' 'Myriangium haraeanum MH855532_CBS_300.34' 'Myriangium duriaei MH855793_CBS_260.36' 'Lembosiniella eucalyptorum NR_165601_CBS_144603' Lembosiniella_sp._CSN1210_ITS4 Lembosiniella_sp._CSN1225_ITS5_CS31 'Delphinella strobiligena MH860318_CBS_735.71' 'Stylodothis puccinioides MH857753_CBS_193.58' 'Cladosporium cladosporioides MH857281_CBS_170.54' 'Capnodium salicinum MH855469_CBS_131.34' 'Diplodia tsugae MH870106_CBS_418.64' 'Patellaria quercus NR_152540_CPC_27232' ; END; BEGIN CHARACTERS; TITLE 'Lembosiniella - ITS alignment'; DIMENSIONS NCHAR=617; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'Elsinoe flacourtiae NR_148141_CBS_474.62' ACGAGGTAGGGC--CTCCCCCGGGAGCCCGA--ACTCCCCACCCTCTGCTGTCGCGAAT---CACGTTGCTTCGGCGGGACTTCC---CCCCCTCCCTCTC--------TCGGGGGGGGCGGGGGTGCCGG---------GCCACC----------GCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTTGTCTTGTAAAACCTTTGCAGTCGGAGTACTAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGCGCGACAGGCCGGCCCC-CC-----------------CGCGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATCTC---------GAAACGCCAGGAGCACCGGTG--ACCCTCC--GCCGTCAA---------------------------------- 'Elsinoe pitangae NR_148162_CBS_227.50' ACGAGGTAGGGC--CTCCTCCGGGAGCCCGA--ACCCCCCACCCTTTGCTGTCGCGAAC---CACGTTGCTTCGGCGGGACCCCC---GCCCCCCCT-CCG--------AGAGAGGGGCGGGAGGGGCCGG---------GCCACC----------GCGCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTTGTCTCTTGGAACCTTTACAGTCAGAGTACAAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGTGCGACAGGCCGGCCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTG--ACCCTCG--GCCGTCAA---------------------------------- 'Elsinoe perseae NR_148160_CBS_406.34' ACGAGGTAGGGC--CTCCTCCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAAT---CACGTTGCTTCGGCGGGACCCCC---CCCCTCCCCTTCTTCGAGAGAAGCGGGGGGCGGGGGGGGCCGG---------GCCACC----------GCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTTGCACATC--AAACATTGTAGTCGGAGTACAAC-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTGGGCGTG--TGGCCGGCCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATCTC---------GAAACGTCAGGAGCACCGGTG--ACCCCCTCCGCCG-------------------------------------- 'Elsinoe hederae NR_148146_CBS_517.50' ACGAGGTAGGGC--CTCCTTCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----CAAGTTGCTTCGGCGGGACCCCC---CCTCT----------------------AAACCGGGGGGACCGG---------GCCTCC----------GCGCCCGGGCAGCGCCCGCCGGGGGACA--CAACCAACTCTT---TTGTTAAAACAATGCAGTCGGAGTACAAT-CGTACAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--TAGGCCGGACC-CC-----------------CGCGTCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTG--ACCCTCC--GCCGTCAA---------------------------------- 'Elsinoe arachidis NR_148125_CBS_511.50' ACGAGGTAGGGTTCTCCCTCGGGAAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TACGTTGCTTCGGCGGGACCCCC---CCTTCTGCCCTTC--------ACCGGGGAGGGGGAGGGACCGG---------GCCTTCA--------CTGGCCCGGGCAGCGCCCGCCGGGGGACC--AAACCAACTCTT--TTGTT--AAATAATGCAGTCGGAGTACAATGTACAAAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGAT--CTGGCCGGCCC-CC-----------------CGTGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC-T-------TCAACGTCGAGAGCACCGGTG--TACCTCC--GCCGTGAA---------------------------------- 'Elsinoe barleriicola NR_148128_CBS_471.62' ACGAGGTAGGGTTCTCCTCCGGGAAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TCTGTTGCTTCGGCGGGACCCCC---CTCC--------------------------AGGGGGGGACCGG-------GAGCCCCTCTCGCGGGGGGGCCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTG--TCATT--GAACATTGCAGTCGGAGTACAACGTACACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGAT--CAGGCCGGTCC-CC-----------------CGGGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCGAGAGCACCGGTG----CCCGA--GCCGCGAA---------------------------------- 'Elsinoe proteae NR_132796_STE_U_1349' ACGAGGTAGGGC--CTCCTTCGGGAGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TCCGTTGCTTCGGCGGGACCCCT---CCCCTCTCC-------------------GGGGGGAGGGACCGG---------GCCTCCA--------AGGGCCCGGGCAGCGCCCGCCGGGGGACC--GAACCAACTCTT--TTTGTCAAAACAATGCAGTCGGAGTACAATGTACAAAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTA-CCAGGCCGGCCCGCA-----------------CGCGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTCTT-------TTGACGTCGAGAGCACCGGTG--ACCCTCC--GCCGTGAAACCTTTT--------------AAATTTCTTCTAA 'Elsinoe eucalyptorum NR_155080_CBS_120084' AAGAGTAAGGGT--TCCCGAAAGGGGCCCGA--CCTCCCCATCCTTTGCTGTCGCGAA----TATGTTGCTTCGGCGGGCCCCCC---TCTC----------------------------GGGGGGGCCGG---------GCCTCA----------CCGCCCGGACAGCGCCCGCCGGGGGACC--GAACCAACTCTG---TTTA--AAACAATGCCGTCCGAGTACTTT-TGTACAATTAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTACTCCGAGGGGCATGCCTGTTCGAGCGTCAGTAGAAGGATCAAGCCCA-GCTTGGTATTAGGCGTC--TGGCCGGCCCG-CCCTTC-------------GGCGGCCGGCCCGCCCGAAATTCATCGGCGAGG----CATCGACCCCCGGCGTGTTAGATTTTC---------GAAACGTCGGGAGCACCGGTC--CACCTCC--GCCGCGAAATCCATT--------------TTACAATGTC--A 'Elsinoe oleae NR_148159_CBS_227.59' ACGAGGAAGGGT--TCCCGAAAGGGGCCCGA--ACTCCCCACCCTTTGCTGTTGCGAA----TACGTTGCTTCGGCGGGCCCGCC---CCTCCCCCCCCAA--------GGGGGGGTACAGGGCTGGCCGG-------TCCCCTCG----------CGGACCGGACAGCGCCCGCCGGAGGACC--AAACCAACTCTG---TTTT--TAACCATACTGTCGGAGTACTTT-TGTACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--AGGCCGGATCC-ACCCCCCGTAAAAAAGGGGGGGAGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGTTAACCTCT--GCCGTCAA---------------------------------- 'Elsinoe rosarum NR_148167_CBS_212.33' ACGAGGAAGGGT--TTCCGAAAGGAGCCCGA--TCTCCCCACCCTTTGCTGTTGCGAA----TCTGTTGCTTCGGCGGGCCCGTCTTGCCTCCCCCGTCCG--------CGGGGGGTGGCCGGCCGGCCGG---------GCTTCA----------CGGCCCGGACAGCGCCCGCCGGAGGACC--AAATCAACTCTG---TTTT--TAACCATACTGTCGGAGTACTTT-TGTACAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCC-GCTTGGTATTAGGCGTC--TGGCCGGACCC-TCCCCCC--------TGGGGAGGACCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGTTAACCTCC--GCCGTGAA---------------------------------- 'Elsinoe jasminicola NR_148149_CBS_212.63' ACGAGGTAGGGC--CTCCCCCGGGAGCCCGA--ACTCCCCACCCTTTGCCGTCGCGAA----CACGTTGCTTCGGCGGGCCACCT---CTCT----------------------------------------------------------------CCGAGGGGACAGCGCCCGCCGGGGGACC--GGAACAACCCTG---CATT--CAACCGTGAGGTCGGAGTACAT--CGTACAATCAAAGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCTATCAAGCCCC-GCTTGGCAGTGGGCGTG--GTGGCCGCCCT-CCATC------------GGAGGGGCCGGCCCGCCCGAAATGCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGTCAGGAGCACCGGTGT-CACCCTC--GCCGCCCA---------------------------------- 'Elsinoe quercus ilicis_NR_148164_CBS_232.61' CCGAGGAAGGGT--TCCCGCGAGGGGCCCGA--ACTCCCCACCCTTTGCTGTCGCGAA?---CGCGTTGCTTCGGCGGGCCCTCC---CCCGGACATC--------------------CGGGGGGGGCCGGG-----GCCACCACA----------GGCCCCGGACAGCGCCCGCCGGGGGACCCGAAACCAACCCTT---TCTG--TAACCGTGACGTCGGAGTACTAT-CGTACAATCAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCGTA-GCTTGGTGTTGGGGCGA-CAGGCCGGGGCC-GCACC------------GCGGCTCCCGGCCCGCCCGAAACCCATCGGCGAGG----CACCGACCCCCGGCGTGTTAGAATTTC---------GAAACGCCGCGAGCACCGGTT---GCGTCT--GCCGCGAA---------------------------------- 'Elsinoe eucalyptigena NR_155099_CPC_29529' AAGAGTATGGGT--CATCC---GTGGCCCGA--ACT-CCCACCCCTTGACGTCGCGAAC---AACGTTGCTTCGGCGCGGCCCGC---CCCCTCCAC---------------------GGGGGGCGACCGG-----------GTCC----------AGGCCCGGGCAGCGCCCGCCGGAGGACC---CCAAAACTCTG----TTT--TAACCATACGGTCGGAGCAAT---TTTGAAATCAAACAAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCCCG-GCTTGGTAATGGGCGTC--CGGCCCGCGCT--------------------TGCCGCGGGCCCGCCCGAAACCCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGAATTCTTTCA-----CGTACGTCGGGCGCGAAGGCC--CCCCTCTC-GCCGCTTAAACCCAC--------GGAGCCCCGCTCCATCACA 'Elsinoe banksiigena NR_159837_CPC_32402' AAGAGCAAGGGT--CCCCC---GGGGCCCGA--CCT-CCCACCCTTTGTCGTCGCGAA----TTCGTTGCCTCGGCGCGGCCCGG---CCTCGCTC-------------------------GGCCGACCGG--------GCTACCC----------TTGCCCGGGCAGCGCCCGCCGGAGGACC--AACCCAACTCTG---TCAA--GAACTGTGCGGTCGGAGCGGATT-TTTCAAAATCAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCCCGGCTTGGAATTGGGCGCC--AGGCCCGCGCT-GC-----------------AGCCGCGGGCCCGCCTCAAACGCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGAATCTTCC-------AAAACGTCGAGAGCACCGGTC--CACTTCA--GCCGCGAACCTCTTC---------------TCCGGAAACAAA 'Myriangium citri KU720543_MAsS1' ---------GGT--ACTTT---TGTGCCCGA--ACT-CCCACCCTTTGTTGTCGCGAA----TTTGTTGCCTCGGCGGGTTGCCT---CTT---------------------------CGGGGGCGACGGG-----------CTCC------------------GGTCCACCCGCCGCAGGACA--TTTATAACCCTG----CTT--TAATTGTAAAGTCTGAGTAAATT----CTTAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCTAC-GCTTGGTCTTGGGGGTT--TGGCTTTTGTT-TT-----------------AAACAAAGGCCCCCCTGAAATGCATCGGCGAGG---AAACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTA---GACTCT--GCCGTACAATCTTTT--------------TTATTCAAA---- 'Myriangium haraeanum MH855532_CBS_300.34' AAGAGTTAGGGT--CCTTC---GGGGCCCAA--TCT-CCCACCCKTTGTKGTCGCGAA----TSAGTTGCSTCGGCGGGCCGTCT---TCTT--------------------------CGGAGACGATGGG-----------CTCT------------------GGCCCACCCGCCGCAGGACC--ATTCAAACTCTG----CTT--TAACAATGCAGTCTGAGAAGA---TTTAATAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCAC-GCTTGGTATTGGGTGTG--TGGCCTTTTTT--------------------TCTAAAAGGCCCGCCCGAAATGCATCGGCGAGG---AGACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTA---ATCTCT--GCCGTACAATCTTTT--------------TTTCTAA------ 'Myriangium duriaei MH855793_CBS_260.36' AAGAGTTGGGGT--CCTCC---GGGGCCCGA--TCT-CCCACCCTTTGTTGTCGCGAA----TTTGTTGCCTCGGCGGGTTTGTC---------------------------------TTCGGACGATGGG-----------CTCC------------------GGCCCGCCCGCCGCAGGACC--ATTCAAACTCTG----CTT--TAACAATGCAGTCTGAGAAGAT--TTTAATAATAAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCAATCAAGCCAC-GCTTGGTATTGGCCGCG----GCCTTTCGT--------------------CACGGAAGGCCCGCCCGAAATGCATCGGCGAGG---AAACCGACCCCCGGCGTGTTAGATTTCT----------GAACGTCAGGAGCACCGGTG---CCCTCA--GCCGTACAATCTTTT--------------TTTCTAA------ 'Lembosiniella eucalyptorum NR_165601_CBS_144603' CAGAGTTAGGGT--CTTC----CAGGCCCGA--TCT-CCCACCCTTTGTTGTCGAACAAACACCTGTTGCTTTGGCGGACCCGCC---GCGTCTCC---------------------GGACCGGCTGTCGG--------GTCTTTT----------CGATCGGGCAAGCGTCCGCCAGAGACCA---ACTAAACTCTT----CGT--TAAACATTC-GTCTGAGTAAA---TGATTAAATCAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCACA-GCTTGGCATTAGGTCTC--TTCGTCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAACCTTCGGCAGAGT-CGGACCGGCTTTGGGCGTAGCAGAAATTGTC-------AAAACGTCCTCATGGCCACAA--GTCTTTA--GCCGCAAAACCTCTCCCCTCGCGGGAGAACTTTTTCAA---- Lembosiniella_sp._CSN1210_ITS4 ---------------------------------------------------------------------------------------------------------------------GGTCGGGCTGCCGG---------GTCCTG----------CGACCGGGTAAGCGCCCGCCGGAGACCA---ATTAAAATCTG--ACATT--TGAACATTCTGTCTGAGTGATT--TATACAAATCAATTAAAACTTTCAACAACGGATCTCTTGGTTCTKGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTYCKGGGGGCATGCCTGTTCGAGCGTCATTACATCAATCAAGCACA-GCTTGGCATTAGGCCTC--TGSGCCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAATCTTCGGCGAAGTCACATCCGGCTTTCAGCGTAGCAGAATCTGTT-------AAAMCGTCCGCGTGGCCAGGGGAGTCTTCC--GCCGCCAGAATCTAT--------------------------- Lembosiniella_sp._CSN1225_ITS5_CS31 ---------------------------------CCT-CTCAC------------------------------------------------------------------------GGGGGCCGGGCTGCCGG---------GTCCT-----------CGATCGGGTAAGCGCCCGCCGGAGAATC---ATTAAAATCTG--ACATT--TGAACATTCTGTCTGAGTGATT--TATACAAATCAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCACA-GCTTGGCATTAGGCCTC-TTGCGCCCGCGG-TC-----------------AAACGCGGGCGGGCCTCAAAACCTTCGGCGAAGTCATATCCGGCTTTGGGCGTAGCAGAATCTGTT-------AAAACGTCCGCGTGGCCAGGGGAGTCTTCC--GCCGCCAGAATCTAT----------TTTATTTTCTCAA---- 'Delphinella strobiligena MH860318_CBS_735.71' AAGAGATAGGGT--CTTC----ATGGCCCGA--CCT-CCAACCCTCTGTTGTTAAAACTAC-CTTGTTGCTTTGGCGGGACCGTC---TCGGTCCCC-----------------------GAGCGCACTAA-----------CCCT----------CGGGTTGGTGAGTGCCCGCCAGAGTCCA---ACCAAACTCTT---GTAT--CAAACCAGTCGTCTGAGTATAAA-ATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCATC-GCTTGGTATTGGGAACG--------------GTCCGT-----------CGAAAGGCGGGCCTTCCTCGAAGACCTCGGCGGGGT-TCAACCAACTTCGGGCGTAGTAGAGTTAAAT-------CGAACGTCTTATAAGCTTGGTCGGATCTCATTGCCGTTAAACCTTTA--------------AATTTTCTA---- 'Stylodothis puccinioides MH857753_CBS_193.58' GGGAAACCGGTG--TTCC----TCGA--CTA--CTT-CCAACCCTCTGTTGTTATAACTAC-CTCGTTGCTTTGGCGGGACCGTT---TGGTCCTCC-----------------------GAGCGCACCAG-----------TCTT----------CGGACAGGTGAGCGCCCGCCAGAGTCTA---ACCAAACTCTT---GTTT--TTAACCAGTCGTCTGAGTATAAA-ATTTTAATTAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACT-GCTTGGTATTGGGCATC--------------GTCCGT-----------CGAAAGGCGGGCGTGCCTCGAAGACCTCGGCGGGGT-TTCTCCAACTTCGGGCGTAGTAGAGTTAAAT-------CGAACGTCTTATAAGCTTGGTGGGACTCCATTGCCGTTAAACCTTTT--------------ATTTTCTA----- 'Cladosporium cladosporioides MH857281_CBS_170.54' -----CAAGTGA--CCCCGGCTACGGCCGGGATGTTCATAACCCTTTGTTGTC-CGAC----TCTGTTGCCTCCGGGGCGACCCT-----------------------------------------------------------------------GCCTTCGGGCGGGGGCTCCGGGTGGACA--CTTCAAACTCTT----GCG--TAACTTTGCAGTCTGAGTAAAC--TTAATTAATAAATTAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTC-GCTTGGTATTGGGCAAC--------------GC-----------------GGTCCGCCGCGTGCCTCAAATCGTCCGGCTGGGT-CTTCTGTCCCCTAAGCGTTGTGGAAACTATT---------CGCTAAAGGGTGTTCGGGA---GGCTAC--GCCGTAAAACAACCC--------------CATTTCTAA---- 'Capnodium salicinum MH855469_CBS_131.34' ATGAGTGATGGG--------CTTCGGCCCGA--CCT-CCAACCCTTTGTCTTACCGAC----CATGTTGCCTCGGGGGTGGCCCT-----------------------------------------------------------------------GCCCTGCGCTTGGCCCCCCCGGTGGACC---ACTAAACTCTG---C----ATCACCTTTGCGTCTGAGTATT---TATATTAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCTTGGGGCACACCTGTTCGAGCGTCATTACACCACTCAAGCCTA-GCTTGGTATTGGGCGAT--------------------------------GCGGCTCCCGCACGCCTCAAATGCTCCGGCTGATC-CGCGTAATCTCTCAGCGTTGTGGAAACTCTC----------GCTCATGGGACCTCGCG----GCTCAC--GCCGTTAAACATATCATTT--------AA------------- 'Diplodia tsugae MH870106_CBS_418.64' CCGAGTT-------CTCGGGCTTCGGCCCGAA-TCT-CCCACCCTTTGTGAACACACC----TCTGTTGCTTTGGCGGCTCTTGC---CGCGC------------------------GGGGGGCCCCCCTG--------AAGGGCC----------GCCCCGCGCGCGCTTCCGCCAGAGGACC---TTCAAACTCCA--GTCAG--TAAACGTCGACGTCTGATAAA---CAAGTCAATAAACTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCT-GCTTGGTATTGGGCGCC--------------GTCCT--------------CTCTGCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATACACC--------TCGCTTTGGAGCGGCTGGCG---TCGCCC--GCCGGACGAACCTTC----------TGAACTTTTCTCA---A 'Patellaria quercus NR_152540_CPC_27232' ATAGAG----------------TATGCACGT--CCGTGCCAGGCCCACGTGGCCCG-------GCACTGGTTCGGTGAAACTCCA---CCCTCTGC----------------------GAAGAGATCTTATATACCTTCTGTTCCC----------TCGGTGGATTCGTATCCGCCGAGGGAGA---TTTAAACCCTT---GCTG--AGTATGTGTCGTCAGAGTAA----TTATCAAATAAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAAACCTCAAGCATC-GCTTGGTGTTGGGTGTT--------------GCCC---------------TCAGCGGGGCACACCTCAAAGCCCTCGGCGGCC--CCGTCCCGCTTCAAGCGTCGTGAACGTCTAAAACGCGTCTCGCTTTGGAAGTCCGGGCC--GGCGCTT--GCCGTGAAAGCCATA--------------TCATC-------- ; END; BEGIN TREES; Title 'Lembosiniella - ITS phylogeny'; LINK Taxa = Lembosiniella; TRANSLATE [0] 1 'Elsinoe flacourtiae NR_148141_CBS_474.62', [1] 2 'Elsinoe pitangae NR_148162_CBS_227.50', [2] 3 'Elsinoe perseae NR_148160_CBS_406.34', [3] 4 'Elsinoe hederae NR_148146_CBS_517.50', [4] 5 'Elsinoe arachidis NR_148125_CBS_511.50', [5] 6 'Elsinoe barleriicola NR_148128_CBS_471.62', [6] 7 'Elsinoe proteae NR_132796_STE_U_1349', [7] 8 'Elsinoe eucalyptorum NR_155080_CBS_120084', [8] 9 'Elsinoe oleae NR_148159_CBS_227.59', [9] 10 'Elsinoe rosarum NR_148167_CBS_212.33', [10] 11 'Elsinoe jasminicola NR_148149_CBS_212.63', [11] 12 'Elsinoe quercus ilicis_NR_148164_CBS_232.61', [12] 13 'Elsinoe eucalyptigena NR_155099_CPC_29529', [13] 14 'Elsinoe banksiigena NR_159837_CPC_32402', [14] 15 'Myriangium citri KU720543_MAsS1', [15] 16 'Myriangium haraeanum MH855532_CBS_300.34', [16] 17 'Myriangium duriaei MH855793_CBS_260.36', [17] 18 'Lembosiniella eucalyptorum NR_165601_CBS_144603', [18] 19 Lembosiniella_sp._CSN1210_ITS4, [19] 20 Lembosiniella_sp._CSN1225_ITS5_CS31, [20] 21 'Delphinella strobiligena MH860318_CBS_735.71', [21] 22 'Stylodothis puccinioides MH857753_CBS_193.58', [22] 23 'Cladosporium cladosporioides MH857281_CBS_170.54', [23] 24 'Capnodium salicinum MH855469_CBS_131.34', [24] 25 'Diplodia tsugae MH870106_CBS_418.64', [25] 26 'Patellaria quercus NR_152540_CPC_27232'; TREE Imported_tree_1 = (((25:0.47487135,(23:0.28648998,24:0.26124773)100:0.3537093)15:0.00000001,((14:0.15896895,((13:0.19551752,(8:0.09301635,((12:0.14434768,(11:0.13033828,((3:0.02335579,(4:0.03278037,(7:0.01633156,(5:0.03549171,6:0.0762175)67:0.03617806)90:0.04485534)66:0.04610904)25:0.01543477,(2:0.04030064,1:0.04187571)69:0.00733946)25:0.01647805)73:0.06000116)50:0.03576141,(9:0.03145563,10:0.04476595)83:0.03364769)27:0.01622885)88:0.09243244)45:0.02492917,(17:0.04490049,(16:0.03047098,15:0.14738414)66:0.02390171)100:0.15010361)26:0.01172255)94:0.23720983,((21:0.06459888,22:0.08040489)100:0.26169183,(18:0.09366168,(19:0.01791761,20:0.01427875):0.13341746)97:0.16945557)95:0.08759554)57:0.13152235)65:0.467862435,26:0.467862435); END;