#NEXUS BEGIN TAXA; TITLE Leptosillia; DIMENSIONS NTAX=13; TAXLABELS Leptosillia_SP._PMM2101_ITS1 'Furfurella luteostiolata NR_164060_CBS_143620' 'Furfurella nigrescens NR_164061_CBS_143622' 'Furfurella stromatica NR_164062_CBS_144409' 'Leptosillia acerina NR_164063_CBS_143939' 'Leptosillia muelleri NR_164065_CBS_143628' 'Leptosillia macrospora NR_164064_CBS_143627' 'Liberomyces macrosporus NR_154605_CCF_4028' 'Leptosillia mayteni NR_166330_CPC_37000' 'Leptosillia pistaciae NR_160064_CBS_128196' 'Leptosillia slaptonensis NR_164066_CBS_145296' 'Leptosillia wienkampii NR_164067_CBS_143630' 'Liberomyces saliciphilus NR_137570_CCF_4020' ; END; BEGIN CHARACTERS; TITLE 'Leptosillia - ITS alignment'; DIMENSIONS NCHAR=525; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Leptosillia_SP._PMM2101_ITS1 -----------------------------------TTACCA-GTTTTGTTGCTTCGGCGGGMTGCGCCTCTCGACGTCTCCCTCCCCCCTCGGGGGCAGGCTGCCGTCCGGGGCGCGCT-ACGGCCCGCCGGGGGT-CTCAAACTCT-------ATTATTACGGATATTCTGAAGTAAAAATATAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCTACCGCTTGGTGTTGGGA----GCCACATACCGCCTGGCGGTAACTCCCCAAATGCAGTGGCAGGATCAGGGCATCTCTGAGCGTAGTAAA----TCTCTTATCTCGCTTTGGCAAGGTGTCCTGGTAGTAGCCATCAAACCTA-TTAT-CTATTGAAT 'Furfurella luteostiolata NR_164060_CBS_143620' CAGAGTACTAT---ACTCCTAAACCC-ATGTGAACTTACCA-GTTTCGTTGCTTCGGCGGGCCTGCGTATACGCG----------CCTCGCGGC-------------GTGCTGCGCGCTCAAGGCCCGCCGAGGGT-CCCAAACTCT-TGA---AATCTTAGTTGGCTTCTGAGCGTAATTATTTAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTTAACTGCTTGGCGTTGGGGCATTACCGT----------ACGGTAAGCCCCGAAAATCAGTGGCAAGATCAG-TCATCTCTGAGCGTAGTAAA----TCTCT--TCTCGCTTTGGTAAGGTGTCCTGGTTGCAGCCAACAAACCCA--ATA-TTTTCTGAT 'Furfurella nigrescens NR_164061_CBS_143622' CAGAGTACTAT---ACTCCTAAACCC-ATGTGAACTTACCA-GTTTCGTTGCTTCGGCGGGCCTGCGTATACGCG----------CCTCGCGGC-------------GTGTTGCGCGCTCAGGGCCCGCCGGGGGT-CCCAAACTCT-TGA---AATCTTAGTTGGCTTCTGAGCGTAATTATTTAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTTAACTGCTTGGTGTTGGGGCATTACCGC---------AACGGTAAGCCCCGAAAACCAGTGGCAAGATCAG-TCATCTCTGAGCGTAGTAAA----TCTCT--TCTCGCTTTGGTAAGGTGTCCTGGTTGCAGCCAGCAAACCCA--TTA-TTTTCTGAT 'Furfurella stromatica NR_164062_CBS_144409' CAGAGTACTAT---ACTCCTAAACCC-ATGTGAACTTACCA-GTTTCGTTGCTTCGGCGGGCCTGCGTATGCGCG---------CCCCCGCGGC-------------GTGTTGCGCGCTCATGGCCCGCCGGGGGT-CCCAAACTCT-TGA---AATCTTAGTTGGCTTCTGAGCGTAATTATTTAATTAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACTCTCAAGCTTAACTGCTTGGCGTTGGGGCATTACCGT----------ACGGTAAGCCCCGAAAATCAGTGGCAAGATCAG-TCATCTCTGAGCGTAGTAAA----TCTCT--TCTCGCTTTGGTAAGGTGTACTGGTTGCAGCCAGCAAACCCA--TTA-TTTTCTGAT 'Leptosillia acerina NR_164063_CBS_143939' CAGAGTACTTT---ACTCATAAACCA-CTGTGAACTTACC---TTCTGTTGCTTCGGCTGGGCTGTCCCCCGGAC---------CTCTCACGA--------GGCCC---GGGGCGGCGTCAAGGCCCGCCGAGGGACCCTAAACTCT-TGT---ATATATATGGAAATTCTGAGA--AACGATTTAATAAATCAAAACCTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCTTTATTGCTTGGAGTTGGGACATTACCGC-----CTCCGGCGGCAAGTCCTCAAATATAGTGGCGAGGCCGGATGTCCTCTAAGCGTAGTAAT----CTTTTTTTCTCGCTTTGGCTAGGCAT-CTGGTTGCAGCCAG-AAACCAC-TTTA-TTTTTTAAT 'Leptosillia muelleri NR_164065_CBS_143628' CAGAGTACTTT---ACTCATAAACCA-CTGTGAACTTACC---TTCTGTTGCTTCGGCTGGGCTGTCCCCCGGAC---------CTCTCACGA--------GGCCT---GGGGCGGCGTCAAGGCCCGCCGAGGGACCCTAAACTCT-TGT---ATATATATGGAATTTCTGAGA--AACGATTTAATAAATCAAAACCTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCTTCATTGCTTGGAGTTGGGACATTACCGC-----CTCCGGCGGCAAGTCCTCAAATATAGTGGCGAGGCCGGATGTCCTCTAAGCGTAGTAAT----CTTCTTTTCTCGCTTTGGCTAGGCGT-CTGGTTGCAGCCAG-AAACAAC-TTTATTTTTTTAAT 'Leptosillia macrospora NR_164064_CBS_143627' CAGAGTACTTTAAAACTCATAAACCC-CTGTGAACTTACCA--TTTTGTTGCTTCGGCGGGCTATGCCCGACCCT---CGCCCACCCCCTCGGGGGAGGCAGGGGAGAGGGCGCCCTTTAGGGGCCCGCCGGAGGT-CTTAAACTAT-CATCTATAACGTATGGGCATTCTGAATG-AGAAAACAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCCTCGTCGCTTGGTGTTGGGACGTTACCACGCGCCTGCGCGGGGTAAGTCCTCAAATGCAGTGGCAAGATCAGGGCACCTCTGAGCGTAGTAGAAACCTATTTTATCTCGCTTTGGCTAGGTGTCCCGGTGGTAGCCAT-AAACCTA-TTTT-TCTTTGAAT 'Liberomyces macrosporus NR_154605_CCF_4028' CAGAGTACTTTAAAACTCATAAACCC-CTGTGAACTTACCA--TTTTGTTGCTTCGGCGGGCTATGCCCGACCCT---CGACCACCCCCTCGGGGGAGGC-GGGGAGAGGGCGCCCTTTAGGGGCCCGCCGGAGGT-CTTAAACTAT-CATCTATAACGTATGGGCATTCTGAATG-AGAAAACAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCCTCGTCGCTTGGTGTTGGGACGTTACCACGCGCCTGCGCGGGGTAAGTCCTCAAATGCAGTGGCAAGATCAGGGCACCTCTGAGCGTAGTAGAAACCTATTTTATCTCGCTTTGGCTAGGTGTCCCGGTGGTAGCCAT-AAACCTA-TTTT-TCTTTGAAT 'Leptosillia mayteni NR_166330_CPC_37000' CAGAGTATCTT---ACTCATAAACCC-CTGTGAACTTACCA--TTCTGTTGCTTCGGCCGGGTTCGC-------------------------------------------------------GCCTGGCCGAGGGAAACTAAACTCT-TGT---ATCTTTTAAGAAATTCTGAGAA-AACAAACAAATAAATCAAAACCTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAGTAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCCTAGTTGCTTGGTGTTGGGACGTTACCGC------GTCAGCGGTAAGTCCTCAAATACAGTGGCAAGATCAGAACAACTCTGAGCGTAGTAAA----TCTTTTATCTCGCTTTGGCTAGGTGTTCTGGTTGCAGCCATCAAACCTA-TTTA-ATTTTGAAT 'Leptosillia pistaciae NR_160064_CBS_128196' CAGAGTACTTT-ACACTCACAAACCC-CTGTGAACTTACCACTTTTTGTTGCTTCGGCGGGCTGCATCTCGTCGC---------CTCCTTCGG--------GGGGTGAGGTGGTGCGCTAAAGGCTCGCCGAGGGTACCTAAACTCT-TATT--ATTTTACTGGTTATTCTGAATCTAAAAGATAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTTAATTGCTTGGTGTTGGGAGCTTACCCC--------CTGTGGTAACTCCCTAAATCTAGTGGCAAGATCAGAACATCTCTGAGCGTAGTAAA-----TTTTTATCTCGCTTTGGTCAGGTGTTTTGGTACTAGCCATCAAACCTA-TTTTATTTCTGAAT 'Leptosillia slaptonensis NR_164066_CBS_145296' CAGAGTACTTT-ACACTCATAAACCCTTTGTGAACTTACTA--TTTTGTTGCTTCGGCGGGCTGTTCCTGACCCC---------TCCTCGCGG--------AGGAT---ACGGTACGTTAAAGGTCCGCCGAGGGTACCTAAACTCTCTAT---TATTACTAATGAATTCTGAATC--GAAAACAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAATAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCTTTACTGCTTGGTGTTGGGATGTTACCGC------GCAAGCGGTAAGTCCTTAAATCTAGTGGCAAGATCAGGGCATCTCTGAGCGTAGTAAA----TCTTTTATCTCGCTTTGGTCAGGTGTCCCGGTGGTAGCCAT-AAACCTATTTTT-ATTCTGAAT 'Leptosillia wienkampii NR_164067_CBS_143630' CAGAGTACTTT-ACACTCATAAACCC-CTGTGAACTTACCA-TTTTTGTTGCTTCGGCGGGCTGTGCCTGA-CCC---------TCTTCGTGG--------GGGAT---ACGGTACGCTAAAGGTCCGCCGAGGGTACCTAAACTCT-TAT---CATTTTTAATGAATTCTGAATT--AAAAACAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAATAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCTTCATTGCTTGGTGTTGGGACGTTACCGC------GCAAGCGGTAAGTCCTCAAATCCAGTGGCAAGATCAGGGCATCTCTGAGCGTAGTAAA----TCTTTTATCTCGCTTTGGTCAGGTGTCCTGGTGGTAGCCAT-AAACCTA-TTTT-ATTTTGAAT 'Liberomyces saliciphilus NR_137570_CCF_4020' CAGAGTACTTT-ACACTCATAAACCC-CTGTGAACTTACCA-TTTTTGTTGCTTCGGCGGGCTGTGCCTGACCCC---------TCCTCGTGG--------GGGAT---ACGGTACGCTAAAGGTCCGCCGAGGGTACCTAAACTCT-TAT---CATTTTTAATGAATTCTGAATT--AAAAACAAATAAATCAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTAGTATTCTAATAGGCATGCCTGTTCGAGCGTCATTTCACCCCTCAAGCTTCATTGCTTGGTGTTGGGACGTTACCGC------GCAAGCGGTAAGTCCTCAAATCCAGTGGCAAGATCAGGGCATCTCTGAGCGTAGTAAA----TCTTTTATCTCGCTTTGGTCAGGTGTCCTGGTGGTAGCCAT-AAACCTA-TTTT-ATTTTGAAT ; END; BEGIN TREES; Title 'Leptosillia - ITS phylogeny'; LINK Taxa = Leptosillia; TRANSLATE [0] 1 Leptosillia_SP._PMM2101_ITS1, [1] 2 'Furfurella luteostiolata NR_164060_CBS_143620', [2] 3 'Furfurella nigrescens NR_164061_CBS_143622', [3] 4 'Furfurella stromatica NR_164062_CBS_144409', [4] 5 'Leptosillia acerina NR_164063_CBS_143939', [5] 6 'Leptosillia muelleri NR_164065_CBS_143628', [6] 7 'Leptosillia macrospora NR_164064_CBS_143627', [7] 8 'Liberomyces macrosporus NR_154605_CCF_4028', [8] 9 'Leptosillia mayteni NR_166330_CPC_37000', [9] 10 'Leptosillia pistaciae NR_160064_CBS_128196', [10] 11 'Leptosillia slaptonensis NR_164066_CBS_145296', [11] 12 'Leptosillia wienkampii NR_164067_CBS_143630', [12] 13 'Liberomyces saliciphilus NR_137570_CCF_4020'; TREE Imported_tree_1 = ((3:0.00000001,(4:0.01216346,2:0.01069616)77:0.00918905)100:0.133374925,((((8:0.0020547,7:0.00000001)100:0.13944161,(11:0.04128518,(12:0.00224697,13:0.00000001)74:0.00271029)88:0.0371957)51:0.02540919,(10:0.09698279,1:0.15434604)34:0.02295589)50:0.04107448,(9:0.0438279,(5:0.00328637,6:0.01075919):0.20970953)100:0.04302594)66:0.133374925); END;