#NEXUS
[written Mon Aug 31 02:34:10 JST 2020 by Mesquite  version 3.61 (build 927) at MyComputer/192.168.56.1]

BEGIN TAXA;
	DIMENSIONS NTAX=16;
	TAXLABELS
		Volvox_africanus Volvox_reticuliferus_male Volvox_carteri_male Eudorina_sp._male Pleodorina_starii_male Yamagishiella_unicocca_minus Volvox_ferrisii Gonium_pectorale_minus Gonium_maiaprillis_minus Gonium_multicoccum_homothallic Gonium_multicoccum_minus Gonium_octonarium_minus Gonium_quadratum_minus Gonium_viridistellatum_minus Chlamydomonas_reinhardtii_minus Chlamydomonas_globosa_minus 
	;

END;


BEGIN CHARACTERS;
	DIMENSIONS  NCHAR=170;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Volvox_africanus                 MLDAVCCVGVDGCARCSVYKVYTFTDTN---HGQVTLELHHCEQTFHANVHGLWRSMRICEVSCELRNGQNTEWLKECIDAFVKQFLSEGFQLQK-PDFRTEA--PKRHALTRKADLTNADISWFFHMPIKDASRELGLSTTYLKRICRQLGIPRWPYRKVASLAFDAQ-
	Volvox_reticuliferus_male        MLDAVCSVGVDGCARCSVYKVYTFTDVN---HGQVTLELHHCEQTFHANIHGLWRSMRIFEVSCELRNGQNTEWLKECIDAFVKQFLSEGFQLQK-PDFRTEA--PKRQALTRKADLTNADISSFFHMPIKDASRELGLSTTYLKRICRQLGIPRWPYRKVASLAFDAQ-
	Volvox_carteri_male              MLDSICSVGVDGCARCSVYKVYTFTDAN---CGQVTLELHHCEQTFHANVHGLWRSMRIFEVSCELRNGQNTEWLKECIDAFVKQFISEGFQLQK-PDFRAEA--PKRQALTRKADLTNADISSFFHMPIKDASRELGLSTTYLKRICRQLGIPRWPYRKVASLAFDAQ-
	Eudorina_sp._male                MLDAVCTVGVDGCARCSVYKVYTFTDVN---YGQVTLELHHCEQTFHANVHGLWRNMRIFEVSCELRNGQNTEWLKECIDAFVKQFLSEGFQLQK-PDVRTEA--PKRQALTRKADLTNADISSFFHMPIKDASRELGLSTTYLKRICRQLGIPRWPYRKVASLAFDAQ-
	Pleodorina_starii_male           MLDAVCSVGVDGCARCSVYKVSTFTDGN---YGEVTLELHHCEQTFHANLHGSWRKMRIFEVSCELRNGHNTEWLKECMDAFVKQFVTEGFQLQK-PDFRAEA--PKRQALTRKADLTNKDISSFFHMPIKDASRELGLSTTYLKRICRQLGIPRWPYRKVASLAFDAQ-
	Yamagishiella_unicocca_minus     MITSVCKFDTVSCARCAVYKTYTFSDAF---SGSITLELHQCEHTFHAHIQGSGPSIFLFEVSCELKNGRNTEWLKECIDAFLKQILSEGFQLQRRPDHRSPAL-PATHALPRKADLTNSDISSFFHLPIKEASRELGLSTTYLKRICRQLGIPRWPYRKVASLDFDVR-
	Volvox_ferrisii                  MVVTVPQGVHSRCDQCAVYKAFTFSERL---LGDVTVEVHQSKNSFHAYIRGCSQAVVVFEVACELKNGCSTEWLKECIDSFFKNILLEGFELQKRPDNGIPLAVPFAHALTRKADISSHDVSQFFHLPIKDAARELGMSTTYLKRICRQRGIPRWPYRKVASLGFDKHT
	Gonium_pectorale_minus           MTISVLRR-DATCNGCSVYKTYVFNNPR---VGRLTLDLHQNGNNFHAHILGSGSDVPLFEICCELKNGRSTEWLKDCMDAFLKQIICEGYRLEKGKEKPPSA-VPLAKVLARKADLTSADISSYFHLPIKEASKCLGISTTYLKRICRQLGIPRWPYRKVASLDLSDR-
	Gonium_maiaprillis_minus         MPLCVSKR-DASCVGCSVYKTYVFVNPK---VGRLTLDLHQSGNNFHVHLLGLANNVPLFEICTELKNGRSTEWLKECMDAFLKQIICEGYRLEKARERPSSS-VPIAKVLARKADLTSADISSFFHLPIKEASKSLGISTTYLKRICRQLGIPRWPYRKVASLELSDC-
	Gonium_multicoccum_homothallic   MVLKVLKSINASCVGCSVYKTYTFTHPR---VGRLKLDLHQNGNSFHAHLLGHGDSALIFEVCCELKNGKSTEWLKECMDAFFKQITAEGYRLMKGQDKAPSA-VPIAKVLARKADLTSADISSYFHLPIKEASKSLGISTTYLKRLCRQLGIPRWPYRKVASLELCGR-
	Gonium_multicoccum_minus         MVLQVLNSTGASCVGCSVYKTYTFINPK---AGRLTLDLHQNGNSFHAHLLGHGDTAPLFEVCCGLRNGKSTEWLKECMDAFLKQINAEGYKLVKGQGKAPSN-IPIAKVLARKADLTSADISNYFHLPIKEASKSLGISTTYLKRLCRQLGIPRWPYRKVASLELRGQ-
	Gonium_octonarium_minus          MV-KVLFREHEGCSGCSLLIQYVFTNPK---VGSILLDIHLQGNNYHAHVRGVKDDATFFELCCGLKNGNSTEWLKECMDAFKKQISLDGYRLDKSQERPAVP-VPSAKGAQRKADLTSTEISQFFHLPIKEASKRLCISTTYLKRICRQLGIPRWPYRKVASLELNGR-
	Gonium_quadratum_minus           MVLTVDTHKNATCTGCSVYKTYNFTNPR---VGRLTLDIHQNGNSFHAHILGQGSSVPLFEMCCELKNGKSTEWLKDCMDAFLKQILSEGYRLEK--DKPRST-VPLAKVLARKADLTSADISGYFHLPIKEASKSLGISTTYLKRICRQLGIPRWPYRKVASLDLGER-
	Gonium_viridistellatum_minus     MVVTVSKRQNATCAGCSVYKSYIFSNPR---VGRLTLDLHQNGNAFHAHLLGHGNVTPLFEVCCELKNGKSTEWLKDCMDAFLQQIITEGYRLEKSQDKVPSA-IPLAKVLPRKADLTSADLSSYFHLPIKEASKSLGISTTYLKRICRQLGIPRWPYRKVASLDLSGR-
	Chlamydomonas_reinhardtii_minus  -------------MACFLARFQ-FISPDSPATKAVTLQIKRSGQDMYACITGHSYSAPVFTVECKLKP--DAEWVRDCMASFKEQMEAEGFLLNEGT-SESTL--PAQP--AKKADLTLHDISAFFHLPVKAAASCLGVSQTYLKILCRRLGIDRWPYRKVASVKKHM--
	Chlamydomonas_globosa_minus      -------------MACLLARFR-FKRPN--VESFVTLELKKSGQDMYACIMGQSCSLTVFTVECKLKP--DAEWVRDCMASFKEQMEAEGFILDEGTNMESAL--ASHSALAKKADLTLHEISAYFHLPVKAAASCLGVSQTYLKIICRRLGVDRWPFRKVASVKKHM--

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1- 170;

END;

BEGIN NOTES;

	TAXABITS   NAME = newlyAddedTaxon on =  1 -  16;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1- 170;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1- 170;
END;

BEGIN TREES;
	Title MID;
	ID 0174406e9fe036;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Volvox_africanus,
[1] 		2 Volvox_reticuliferus_male,
[2] 		3 Volvox_carteri_male,
[3] 		4 Eudorina_sp._male,
[4] 		5 Pleodorina_starii_male,
[5] 		6 Yamagishiella_unicocca_minus,
[6] 		7 Volvox_ferrisii,
[7] 		8 Gonium_pectorale_minus,
[8] 		9 Gonium_maiaprillis_minus,
[9] 		10 Gonium_multicoccum_homothallic,
[10] 		11 Gonium_multicoccum_minus,
[11] 		12 Gonium_octonarium_minus,
[12] 		13 Gonium_quadratum_minus,
[13] 		14 Gonium_viridistellatum_minus,
[14] 		15 Chlamydomonas_reinhardtii_minus,
[15] 		16 Chlamydomonas_globosa_minus;
	TREE Imported_tree_1 = (((((((1:0.02900754,2:0.00664467)0.3830:0.00692283,4:0.01454695)0.4190:0.02006369,5:0.07780148)0.1660:0.00886735,3:0.0)0.9750:0.32345117,6:0.04913428)0.5880:0.07934995,7:0.55598427)0.7450:0.37122891,(12:0.51599065,((10:0.05102941,11:0.08954907)0.9310:0.07075996,(14:0.09602484,(9:0.11237468,(8:0.04019471,13:0.09037513)0.4820:0.03262957)0.2190:0.04111084)0.3080:0.0)0.5490:0.0310929)0.6500:0.08857599,(15:0.08378552,16:0.18525873)1.0000:2.0702539);

END;