#NEXUS

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=6;
	TAXLABELS
		Volvox_reticuliferus_Female Volvox_reticuliferus_Male Volvox_carteri_Male Volvox_carteri_Female Volvox_africanus Chlamydomonas_reinhardtii 
	;
END;

BEGIN CHARACTERS;
	TITLE  Vr_Va_MTMTM0417_6x450;
	DIMENSIONS  NCHAR=450;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Volvox_reticuliferus_Female  MSARQGFGGIGENRTGIGSRTVTRNLSTSGERNE-TAMMSDEIRSEVRRIVPALTDDRFKGQSGKIAILGGCFEYTGAPYFAAFAALAVGADLSHVFCSTSAAPIIKQYSPDLLVHPYFLQRSDLLQQVKATTQQQQQTVQPGTLGGLSTNHMLAAEQADVAAQTAAAAVHVAEATAEVESWFNRLDCLVVGPGLGRDPLLLDIARSVILRAKAAKMPLVLDGDGLFLVAREPELVAGYTNCVLTPNLNEFRRLASTMGVSLHGPNNDRSSKLLEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFISWTLAFLDTAKQSAEVDVVILPEINPMVLASYGACLVTRTAAAYAFAARKRAMVASDMLALLGSAMEMLFDTAGGTGAGG----AAGPGAPGQGLLQAHVPAPSTSIGVGCPVGVLELPGGT-
	Volvox_reticuliferus_Male    MSARQGFSGMGESRPGIGSRTVTRNLSTSGERNE-NAMMSDEIRSEVRRIVPALTDDRFKGQSGKIAVLGGCFEYTGAPYFAAFAALAVGADLSHVFCSTSAAPIIKQYCPDLLVHPYFLQRSDLLEQVKL----QQP-VSSGTLGGLPTNHVVPADQADLAAQTAAAAVHVAEATAEVESWFNRLDCLVVGPGLGRDPLLLDIARSVILRAKAAKMPLVLDGDGLFLVAREPELVSGYTNCVLTPNLNEFRRMASTMGVSLHGPNNDRSSKLLEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFISWTLAFLDIARQSAEVEVVILPEINPMVLASYGACLVTRTAAAYAFAARKRAMVASDMLTQLGSAMEMLFDTAGGTGTAG----AAGPGVPGQGLLQAHVPAPNTSIGVGCPVGVLELPGGN-
	Volvox_carteri_Male          MSARQGFGVIGENRTGIGSRTATRNLSSSGERNE-NAMMSDEIRSEVRRIVPTLTDDRFKGQSGKVAVLGGCFEYTGPPYFASVAALAVGADLSHVFCSTSAAPIIKQYSPDILVHPYFLQRSELMQNVK----------------------------------TAAATAHVAEATVEVESWFNRLDCLVVGPGLGRDPLLLDIARSVILRAKAAKMPLVLDGDGLFLVAREPELVAGYTNCVLTPNLNEFRRLASTMGVSLHGPNNDRSSKLLEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFISWTLAFLDSARQSAEVEVVILPEINPMVLASYGACLVTRTAAAYAFAARKRAMVASDMLGQLGSAMEMLFDTAGGTATAG----AVGPGLQGQGLLQAHISANTPNIGAAVS------SGGS-
	Volvox_carteri_Female        MSARQASAGIAENRTGIGSRTVTRNLSSSGERNE-NAMMSDEIRSEVRRIVPTLTDDRFKGQSGKVAVLGGCFEYTGAPYFAALAALAVGADLSHVFCSTSAAPIIKQYSPDLLVHPYFLQRSDLLQH--------------------------------------------------VESWFNRLDCLVVGPGLGRDPLLLDIARSVILRAKAAKMPLVLDGDGLFLVAREPELVAGYTNCVLTPNLNEFRRLASTMGVSLHGPNNDRSSKLLEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFISWTLAFLDSARQSAEVEVVILPEINPMVLASYGACLVTRTAAAYAFAARKRAMVASDMLGQLGSAMEMLFDTAGGTATAG----TVGPGLQGQGLLQAHISANTPSIGVGVS------SGGS-
	Volvox_africanus             MSARQGFGGIGENRTGIGSRTVTRNLSTSGERNE-NAMMSDEIRSEVRRIVPTLTDDRFKGQSGKIAVLGGCFEYTGAPYFAAFAALAVGADLSHVFCSTSAAPIIKQYSPDLLVHPYFLQRSDLLQQVKVTAQQQQP-VSPGTLGGLAANHMISAEQADVAAQTAAAAVHVAEATAEVESWFNRLDCLVVGPGLGRDPLLLDIARSVILRAKATKMPLVLDGDGLFLVAREPELVAGYTNCVLTPNLNEFRRLASTMGVSLHGPNNDRSSKLLEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFISWTLAFLDTAKQSAEVEVVILPEINPMVLASYGACLVTRTAAAYAFAARKRAMVASDMLALLGSAMEMLFDTAGGTGAAG----PAGPGAPGQGLLQAHVPAPSTSIGVGGPVGVLELPGAT-
	Chlamydomonas_reinhardtii    MAARTG----QEARTGLGSRTVTRNLSASGERNDGNAMMSDEIRSEVRRIVPALTDDRYKGQSGKIAVLGGCAEYTGAPYFAAFAALAVGADLSHVFCSTSAAPVIKQYSPDLLVHPYFMQTADLLQQMRASP------PACGSTGD--------AQQDAAAAQAAAAAAHVAEATAEVEGWFNRLDCLVVGPGLGRDPLLLDIARSVILRARACKIPLVLDGDGLFLVAREPDLVAGYTNCVLTPNLNEFRRLASTLGVSLHGPNNDRSSKLVEVTAHLRGPTLVSKGPVDAICDGKVTMICNASGGAKRCGSQGDILAGTIATFIAWTLAFLDSARQSAEVEVVILPEINPMVLASYGACLVTRTAAAYAFASRKRAMVASDMLAQLGSAMEMLFDSAGGAGGGAGAGVATGGGGQGQGIMQAHTAA-----GGGG--------GGS-

;


END;

BEGIN TREES;
	Title Vr_Va_MTMTM0417_6x450;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Volvox_reticuliferus_Female,
[1] 		2 Volvox_reticuliferus_Male,
[2] 		3 Volvox_carteri_Male,
[3] 		4 Volvox_carteri_Female,
[4] 		5 Volvox_africanus,
[5] 		6 Chlamydomonas_reinhardtii;
	TREE PAUP_1 = (6:0.064993,((3:0.032133,4:0.014039):0.035105,(2:0.043795,(1:0.020402,5:0.019281):0.014053):0.023716):0.064993)[% ] [% ] [%  setBetweenBits = selected ];

END;