#NEXUS [written Wed Aug 12 18:31:47 CEST 2020 by Mesquite version 3.61 (build 927) at DNPW-PP-100/134.76.71.100] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=36; TAXLABELS Trichoderma_afroharzianum_Tri1_MT793748 Trichoderma_afroharzianum_T1K1_MN518417 Trichoderma_afroharzianum_Tri2_MT793747 Trichoderma_afroharzianum_Tri3_MT793746 Trichoderma_afroharzianum_Tri5_MT793745 Trichoderma_harzianum_IPP0320_MT793759 Trichoderma_harzianum_IPP0318_MT793761 Trichoderma_harzianum_IPP0319_MT793760 Trichoderma_tomentosum_CEN252_KC561062 Trichoderma_tomentosum_Tri4_MT793744 Trichoderma_harzianum_CBS316.31_MH855226 Trichoderma_harzianum_Tri6_MT793751 Trichoderma_harzianum_Tri7_MT793750 Trichoderma_harzianum_Tri8_MT793749 Trichoderma_harzianum_Tri9_MT793752 Trichoderma_harzianum_Tri10_MT793756 Trichoderma_harzianum_Tri11_MT793755 Trichoderma_harzianum_Tri12_MT793754 Trichoderma_harzianum_Tri14_MT793753 Trichoderma_harzianum_T12_MT793758 Trichoderma_harzianum_T39_MT793757 Trichoderma_inhamatum_CBS274.78_MH861135 Trichoderma_afarasin_GJS0698_FJ442630 Trichoderma_endophyticum_23F18CAC_MK713502 Trichoderma_camerunense_GJS99231_AY027783 Trichoderma_lixii_DA3B102_MH729889 Trichoderma_neotropicale_CBS130633_MH865818 Trichoderma_guizhouense_PARC1022_MT448968 Trichoderma_virens_CBS249.59_MH857855 Trichoderma_rifaii_DIS337F_FJ442621 Trichoderma_pyramidale_Tpyle24_MT102399 Trichoderma_atrobrunneum_ALG07_MT000972 Trichoderma_simmonsii_E32_MT706637 Trichoderma_lentiforme_CEN1428_MK714909 Trichoderma_atroviride_IPP0316_MT793762 Trichoderma_atroviride_SZMC24276_MN516465 ; END; BEGIN CHARACTERS; TITLE ClustalW_Alignment_Trichoderma_ITS; DIMENSIONS NCHAR=564; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Trichoderma_afroharzianum_Tri1_MT793748 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGCGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_afroharzianum_T1K1_MN518417 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_afroharzianum_Tri2_MT793747 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_afroharzianum_Tri3_MT793746 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_afroharzianum_Tri5_MT793745 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_IPP0320_MT793759 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_IPP0318_MT793761 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_IPP0319_MT793760 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_tomentosum_CEN252_KC561062 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATTCTCAAGCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCC-TCCCTCTG-CGGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAAACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_tomentosum_Tri4_MT793744 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATTCTCAAGCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCC-TCCCTCTG-CGGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAAACTTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_CBS316.31_MH855226 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTTTG-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGAT----------------------------- Trichoderma_harzianum_Tri6_MT793751 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri7_MT793750 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri8_MT793749 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri9_MT793752 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri10_MT793756 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri11_MT793755 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri12_MT793754 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_Tri14_MT793753 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_T12_MT793758 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTTTCTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_harzianum_T39_MT793757 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTTTCTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_inhamatum_CBS274.78_MH861135 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACC----------------------------------- Trichoderma_afarasin_GJS0698_FJ442630 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTTTTATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGC------------ Trichoderma_endophyticum_23F18CAC_MK713502 -----TGTGAACGTTAC-AAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCCTCTTATCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCCCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCAAGGGGAGCGCGGCGCGTCCACAGCCGT-AAACACCCAA--CTTC------------------------------------------------ Trichoderma_camerunense_GJS99231_AY027783 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCTAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTA----------------------- Trichoderma_lixii_DA3B102_MH729889 --------GAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCCCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGA--------------------------------------------- Trichoderma_neotropicale_CBS130633_MH865818 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_guizhouense_PARC1022_MT448968 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCCACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTCTG-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAA-------- Trichoderma_virens_CBS249.59_MH857855 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTT--ACTATCTGAGCCAT-CTCGGCGCCCCTCGTGGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCC----CTTTA-CGGG--GCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCCAAACTTCTGAAATGTTGACC----------------------------------- Trichoderma_rifaii_DIS337F_FJ442621 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGC------------ Trichoderma_pyramidale_Tpyle24_MT102399 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_atrobrunneum_ALG07_MT000972 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTATTGTATACCCCCTCGCGGGTTTTTTT-ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTT-G-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_simmonsii_E32_MT706637 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTGCCTTTG-GCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA---TTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA--- Trichoderma_lentiforme_CEN1428_MK714909 CCCAATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCT--GCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTTTTGTATACCCCCTCGCGGGTTTTTT--ATAATCTGAGCCTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGA--TCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGC------------ Trichoderma_atroviride_IPP0316_MT793762 CCCAATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC---GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC-AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTAT--------------TT-CTTACAGCTCTGAGCAAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGACCTCGGGAGCCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- Trichoderma_atroviride_SZMC24276_MN516465 CCCAATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC---GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC-AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTAT--------------TT-CTTACAGCTCTGAGCAAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGACCTCGGGAGCCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAA--CTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGC- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 564; END; BEGIN NOTES; TAXABITS NAME = newlyAddedTaxon on = 1 - 36; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 564; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 564; END; BEGIN TREES; Title ML_analysis_Trichoderma_ITS; ID 0173e38125205; LINK Taxa = Taxa; TRANSLATE [0] 1 Trichoderma_afroharzianum_Tri1_MT793748, [1] 2 Trichoderma_afroharzianum_T1K1_MN518417, [2] 3 Trichoderma_afroharzianum_Tri2_MT793747, [3] 4 Trichoderma_afroharzianum_Tri3_MT793746, [4] 5 Trichoderma_afroharzianum_Tri5_MT793745, [5] 6 Trichoderma_harzianum_IPP0320_MT793759, [6] 7 Trichoderma_harzianum_IPP0318_MT793761, [7] 8 Trichoderma_harzianum_IPP0319_MT793760, [8] 9 Trichoderma_tomentosum_CEN252_KC561062, [9] 10 Trichoderma_tomentosum_Tri4_MT793744, [10] 11 Trichoderma_harzianum_CBS316.31_MH855226, [11] 12 Trichoderma_harzianum_Tri6_MT793751, [12] 13 Trichoderma_harzianum_Tri7_MT793750, [13] 14 Trichoderma_harzianum_Tri8_MT793749, [14] 15 Trichoderma_harzianum_Tri9_MT793752, [15] 16 Trichoderma_harzianum_Tri10_MT793756, [16] 17 Trichoderma_harzianum_Tri11_MT793755, [17] 18 Trichoderma_harzianum_Tri12_MT793754, [18] 19 Trichoderma_harzianum_Tri14_MT793753, [19] 20 Trichoderma_harzianum_T12_MT793758, [20] 21 Trichoderma_harzianum_T39_MT793757, [21] 22 Trichoderma_inhamatum_CBS274.78_MH861135, [22] 23 Trichoderma_afarasin_GJS0698_FJ442630, [23] 24 Trichoderma_endophyticum_23F18CAC_MK713502, [24] 25 Trichoderma_camerunense_GJS99231_AY027783, [25] 26 Trichoderma_lixii_DA3B102_MH729889, [26] 27 Trichoderma_neotropicale_CBS130633_MH865818, [27] 28 Trichoderma_guizhouense_PARC1022_MT448968, [28] 29 Trichoderma_virens_CBS249.59_MH857855, [29] 30 Trichoderma_rifaii_DIS337F_FJ442621, [30] 31 Trichoderma_pyramidale_Tpyle24_MT102399, [31] 32 Trichoderma_atrobrunneum_ALG07_MT000972, [32] 33 Trichoderma_simmonsii_E32_MT706637, [33] 34 Trichoderma_lentiforme_CEN1428_MK714909, [34] 35 Trichoderma_atroviride_IPP0316_MT793762, [35] 36 Trichoderma_atroviride_SZMC24276_MN516465; TREE Imported_tree_1 = ((((((((((((((((((23:0.0,27:0.0):0.0[%bootstrapFrequency = 0.018 ],19:0.0):0.0[%bootstrapFrequency = 0.001 ],18:0.0):0.0[%bootstrapFrequency = 0.0 ],17:0.0):0.0[%bootstrapFrequency = 0.0 ],16:0.0):0.0[%bootstrapFrequency = 0.0 ],15:0.0):0.0[%bootstrapFrequency = 0.0 ],14:0.0):0.0[%bootstrapFrequency = 0.0 ],13:0.0):0.0[%bootstrapFrequency = 0.0 ],12:0.0):0.0[%bootstrapFrequency = 0.0 ],8:0.0):0.0[%bootstrapFrequency = 0.0 ],7:0.0):0.0[%bootstrapFrequency = 0.0 ],6:0.0):0.0[%bootstrapFrequency = 0.001 ],30:0.0):0.0[%bootstrapFrequency = 0.005 ],25:0.00188956):0.0[%bootstrapFrequency = 0.016 ],(26:0.00200842,34:0.0):0.0[%bootstrapFrequency = 0.026 ]):0.0[%bootstrapFrequency = 0.379 ],((9:0.0,10:0.0):0.0115797[%bootstrapFrequency = 0.999 ],(((11:0.0,33:0.0):0.0[%bootstrapFrequency = 0.372 ],28:0.00369227):0.0[%bootstrapFrequency = 0.449 ],(1:0.00181672,(2:0.0,(3:0.0,(4:0.0,(5:0.0,32:0.0):0.0[%bootstrapFrequency = 0.112 ]):0.0[%bootstrapFrequency = 0.043 ]):0.0[%bootstrapFrequency = 0.028 ]):0.0[%bootstrapFrequency = 0.04 ]):0.00181714[%bootstrapFrequency = 0.563 ]):0.00546472[%bootstrapFrequency = 0.754 ]):0.00190096[%bootstrapFrequency = 0.356 ]):0.00189883[%bootstrapFrequency = 0.174 ],((24:0.01422198,31:0.0):0.0[%bootstrapFrequency = 0.17 ],(20:0.0,(21:0.0,22:0.0):0.0[%bootstrapFrequency = 0.053 ]):0.0[%bootstrapFrequency = 0.084 ]):0.0[%bootstrapFrequency = 0.532 ]):0.00738162[%bootstrapFrequency = 0.748 ],29:0.01367884,(35:0.0,36:0.0):0.0884173[%bootstrapFrequency = 1 ])[% ] [% ] [% setBetweenDouble = bootstrapFrequency ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1597249907926; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7211596419297184292; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1937515346027545788; mqVersion 361; checksumv 0 3 3338210823 null getNumChars 564 numChars 564 getNumTaxa 36 numTaxa 36 short true bits 15 states 15 sumSquaresStatesOnly 390416.0 sumSquares 390416.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 311; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1280 905; setLocation 1912 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #7211596419297184292 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #7211596419297184292; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 318; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 969 833; setLocation 1912 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #7211596419297184292 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0173e38125205; toggleUseWeights off; endTell; setAssignedID 1084.1597249763811.5433449637554169919; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 969 833; setLocation 1912 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; setSelectedTaxonHighlightMode 1; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; setTaxonNameStyler #mesquite.trees.NoColorForTaxon.NoColorForTaxon; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1937515346027545788 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 272; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 969 833; setLocation 1912 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;