#NEXUS [written Wed Sep 01 16:01:32 CEST 2021 by Mesquite version 3.61 (build 927) at mdk-crou-006.cbs-niob.local/10.136.73.120] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=51; TAXLABELS Phytophthora_cinnamomi_KX251816.1 'Absidia panacisoli NG_063948.1' Phytophthora_sinensis_HQ665269.1 Phytophthora_melonis_KX251712.1 Phytophthora_heveae_KX251116.1 Phytophthora_cryptogea_KX251872.1 Phytophthora_richardiae_KX251928.1 Phytophthora_tropicalis_HQ665233.1 Phytophthora_mengei_KX250661.1 Phytophthora_capsici_KX250640.1 Phytophthora_glovera_KX250654.1 Phytophthora_mexicana_KX250675.1 Phytophthora_aysenensis_MN557839.1 Phytophthora_citricola_EU080240.1 Phytophthora_personensis_MT159417.1 Phytophthora_plurivora_KX250836.1 Phytophthora_pini_KX250815.1 Phytophthora_multivora_KX250780.1 Phytophthora_inflata_KX250773.1 Phytophthora_citricola_KX250752.1 Phytophthora_acerina_KX250717.1 Phytophthora_europaea_KX251527.1 Phytophthora_fragariae_HQ665150.1 Phytophthora_cambivora_EU080873.1 Phytophthora_alni_EU079598.1 Phytophthora_rubi_KX251569.1 Phytophthora_fragariae_KX251548.1 Phytophthora_sulawesiensis_EU080349.1 Phytophthora_mississippiae_KX251310.1 Phytophthora_bilorbang_KX251185.1 Phytophthora_gibbosa_KX251227.1 Phytophthora_gregata_KX251255.1 KPhytophthora_ornamentata_X251324.1 Phytophthora_borealis_KX251192.1 Phytophthora_gonapodyides_KX251241.1 Phytophthora_riparia_KX251352.1 Phytophthora_gonapodyides_EU080535.1 Phytophthora_lacustris_KX251276.1 Phytophthora_crassamura_KX251206.1 Phytophthora_megasperma_HQ665228.1 Phytophthora_megasperma_KX251290.1 Phytophthora_rosacearum_KX251450.1 Phytophthora_inundata_KX251158.1 Phytophthora_humicola_KX251144.1 'Phytophthora aquae-cooljarloo MT210485' Phytophthora_gemini_KX251130.1 Phytophthora_thermophila_MG920808.1 Phytophthora_amnicola_KX251172.1 Phytophthora_litoralis_KX251283.1 Phytophthora_fluvialis_KX251213.1 Phytophthora_thermophila_KX251359.1 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1383; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phytophthora_cinnamomi_KX251816.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggttcgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgcgt---------ggattggtgcg--ggctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- 'Absidia panacisoli NG_063948.1' acccgctgaacttaagcatatcaataagcggaggaaaagaaaataacaatgattcccccagtaacggcgagtgaacagggaaaagctcaaagttggaacctcctggc--cttaggtctggcggattgtaaactaaagctctagagtagtttggctggcccgg------taaaaaagttctctggaaagggacgacaaagagggtgaaatccccgttt--------ttggccggagcatagtctcacgtttgctctttagcgaagagtcaggttgtttggtattgcagcctaaagttggaggtaaatctctcctaaagctaaatattgacgaaagaccgatagcgaacaagtaccgtgagggaaagatgaaaagcaccttgaaaagggggtcaaaaagtacgtgaaattgctgaaagggaac---------------------------------------------------------ggtatgaaatcagactgtctttttggtaatcagcctgggctttggcctgggtgcacttgccagt-------------aagtacagcctacgacaatttgaa----gcgtgggaaaaaatcagggggaatgtggcctcggcttcg-gcggaggtgttatagccccttgaa--aaataccatgctttggattgag--gactgcagtgagccattag----------------ggatgaactgtaggcgcttagtttcggtaaggaaggaatctctgcttcgggtggtgccttttttctcgggattaacccgtttactttttctttttctcgcttaggtcgtaggcataatgattttatatcacccgtcttgaaacacggaccaaggagtccaccatgattgcgagtctttgggtgtagaaacccatgggcggaaggaaactga-----------------ccaagatatgaag----------------gcgcaagctggcaatatcctccagcgaggacgttttatactgaattgactgagagaaagcaattatgatgggacccgaaagatggtgaactatacttgaatagggtgaagccagaggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaatttgagtataggggcgaaagactaatcgaaccatctagtagctggttcctgccgaagtttccctcaggatagcagaaactca--caaagcagttttatggggtaaagcgaatgattagaggccttgggggcgaaatgcccttaacctattctcaaactttaaatatgtaagacgcctttctttcttaattgaagttgggcctttgaatgcagagtttctagtgggccatttttggtaagcagaactggc- Phytophthora_sinensis_HQ665269.1 ---cgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgctcggtgtgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_melonis_KX251712.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgctcggtgtgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_heveae_KX251116.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggatgagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcacttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagttgctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgctcggtgtgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgct-tgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtcttcgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggctttaacttgttgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgtgggcttctgtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_cryptogea_KX251872.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgagggcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgggtggctcttgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggtatatttcattggtgagtgtgtgcgtgcgtgtgctttggcagtggctttttt-ggctgcgctgggcgtgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgagtgtgggtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--cgctgtaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_richardiae_KX251928.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgagggcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgggtggctcttgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggtatatttcattggtgagtgtgtgcgtgcgtgtgctttggcagtggctttttt-ggctgcgctgggcgtgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgagtgtgggtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--cgctgtaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_tropicalis_HQ665233.1 ---cgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggc- Phytophthora_mengei_KX250661.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagtgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_capsici_KX250640.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_glovera_KX250654.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgcgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_mexicana_KX250675.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcatgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_aysenensis_MN557839.1 ------------------------------------------???????ggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggcgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgtggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtgg?????????????------------------------------------- Phytophthora_citricola_EU080240.1 --ccgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcctggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggc- Phytophthora_personensis_MT159417.1 ---cgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggc- Phytophthora_plurivora_KX250836.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_pini_KX250815.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_multivora_KX250780.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_inflata_KX250773.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_citricola_KX250752.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_acerina_KX250717.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgttttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagcgtttgcgtgcgtgtgctgtggcagtggctttttt-ggctgcgcccggtgtgtgtgctgtgagtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtttgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcctcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttttttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_europaea_KX251527.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgtgctgtggcagcggccttttt-ggttgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_fragariae_HQ665150.1 ---cgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagcggccttttt-ggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_cambivora_EU080873.1 -cccgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagcggcctttttgggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_alni_EU079598.1 ----------------------------------------aactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgYgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagcggcctttttgggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_rubi_KX251569.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagcggccttttt-ggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_fragariae_KX251548.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgctgtggcagcggccttttt-ggctgcgctcggtgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctccgcgtttgtctgttatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtctgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--ggccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_sulawesiensis_EU080349.1 -cccgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgcgcgtgcgtgtgttgtggcagcggctttttt-ggctgcgcccggcgcgtgtgctgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggatggatgcg--tgctttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_mississippiae_KX251310.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_bilorbang_KX251185.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggatgagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgttgtgtgcgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagctgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_gibbosa_KX251227.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgcgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_gregata_KX251255.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcggacttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- KPhytophthora_ornamentata_X251324.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_borealis_KX251192.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_gonapodyides_KX251241.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagYtgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_riparia_KX251352.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgttgtgcgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_gonapodyides_EU080535.1 --ccgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgttgtgcgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_lacustris_KX251276.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgttgtgcgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_crassamura_KX251206.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgcgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgcggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctaccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgcgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtaaagggcagcgcaagttgtctgaggtaggaaatgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_megasperma_HQ665228.1 ---cgctgaacttaagcatatcaataagcggaggaaaagaaactaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgcgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgcgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctaccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaatgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaactttctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaagttgctagtgggccatacggggtaagctcgtctggcg Phytophthora_megasperma_KX251290.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgcgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctcgcgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatctgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctaccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgccttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaatgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaactttctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_rosacearum_KX251450.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccccttgtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgcgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgctgaggaggtagggcttacgctctgcgtttgtctattatatcttggcggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_inundata_KX251158.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcacggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccccgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgtgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgcttgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgctgaggaggtagggcttacgctctgcgtttgtctattatatcttggcggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_humicola_KX251144.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcacggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccccgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgtgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgcttgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgctgaggaggtagggcttacgctctgcgtttgtctattatatcttggcggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- 'Phytophthora aquae-cooljarloo MT210485' -----------------------------------------actaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcacggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccccgagtggctcatgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtttgtgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgcgcgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgctgaggaggtagggcttacgctctgcgtttgtctattatatcttggcggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctca????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????------------------------------------- Phytophthora_gemini_KX251130.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcacggcgaattgtag--------tctatagaggcgtggtcagcgtgggcgcttggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccccgagtggctcgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtttgtgcgtgcgctgtagcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgcgcgcttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatactgcgggaaatggctgYcgaggaggtagggcttacgctctgcgtttgtctattatatcttggcggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggcgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagctgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_thermophila_MG920808.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagYgtgRgcgctYggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggctYgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgYttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgYgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgYcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtgga????????????------------------------------------- Phytophthora_amnicola_KX251172.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgtgagcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggcttgtgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgcgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_litoralis_KX251283.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgtgagcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggcttatgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_fluvialis_KX251213.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgtgagcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggcttatgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagcgtgtgcgcgcgtgcgctgtggcagcggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtgggtgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- Phytophthora_thermophila_KX251359.1 ------------------------------------------ctaacaaggattcccctagtaacggcgagtgaagcgggaagagctcaagcttaaaatctccgtgcaagttttgcgcggcgaattgtag--------tctatagaggcgtggtcagtgtgagcgctcggggcaagttccttggaagaggacagcatggagggtgatactcccgttcatccctgagtggcttatgcgta---cgacccgtgttcttt------gagtcgcgttgtttgggaatgcagcgcaaagtaggtggtaaattccatctaaagctaaatattggtgcgagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttgaaaagagagttaaagagtacctgaaactgctgaaagggaaccgaatcgtttccagtgtctataatccgtggcatatttcattggcgagtgtgtgcgcgcgtgcgctgtggcagtggctttttt-ggctgcgctcggtgcgtgtgttgtgtgtgtttgctggtgccctgtgctgcggtgggacgtcaaggtcagttcgtatgctgcgggaaatggctgccgaggaggtagggcttacgctctgcgtttgtctattatatcttggtggacgagtcgtcgcggttgggactgaggtgcctacaacgtgcttttgagtggatgtgtgtctccgtgtgcgccgtgtgcggatagctt------------gctatgcgtgtgtggttgtgtgt---------ggattgatgcg--tgtcttaacttgtcgccgttcgggacgttgacgaaatggagcgatccgacccgtcttgaaacacggaccaaggagtctaacatgtgtgcaagtgttagggtgtggaaaccccagcgcgaaatgaaagtgaagggcagcgcaagttgtctgaggtaggaaacgttgcgggcttcggtctgcggcgtggcactatcgaccgatcatgaaccttcgtggtgaaagatttgagtttgagcacatatgttggtacccgaaagatggtgaactatgcctgagtagggtgaagccaggggaaactctggtggaagctcgtagcgattctgacgtgcaaatcgatcgtcaaacttgggtataggggcgaaagactaatcgaaccatctagtagctggttccctccgaaatttccctcaggatagcagcaacttatttacgatagttttatgaggtaaagcgaatgattagaggattcggggaagaaacttcctcgacctattctcaaactttaaatctgtaagacctgcaggtttcttaattgaacttgtggatgtgaatatcaa------------------------------------- ; END; BEGIN mrbayes; outgroup 'Absidia panacisoli NG_063948.1'; charset locus1 = 1 -1383; charset excludedchars = 1 -42 1347 -1383; exclude excludedchars; partition AllLoci = 1 : locus1; log start filename = 000OomycotaLSU.log; END; BEGIN mrbayes; set partition = AllLoci; prset statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); lset nst = 6 rates = invgamma; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 10000000000 nchains = 4 printfreq = 1 temp = 0.15 samplefreq = 1 savebrlens = yes stoprule = yes stopval = 0.01 filename = 000OomycotaLSU; mcmc; sump; sumt; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 1383; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 1383; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 1383; END; BEGIN TREES; Title 'Fig. 7. Overview Phytophthora LSU phylogeny'; ID 017ba0d9db4016; LINK Taxa = Taxa; TRANSLATE [0] 1 Phytophthora_cinnamomi_KX251816.1, [1] 2 'Absidia panacisoli NG_063948.1', [2] 3 Phytophthora_sinensis_HQ665269.1, [3] 4 Phytophthora_melonis_KX251712.1, [4] 5 Phytophthora_heveae_KX251116.1, [5] 6 Phytophthora_cryptogea_KX251872.1, [6] 7 Phytophthora_richardiae_KX251928.1, [7] 8 Phytophthora_tropicalis_HQ665233.1, [8] 9 Phytophthora_mengei_KX250661.1, [9] 10 Phytophthora_capsici_KX250640.1, [10] 11 Phytophthora_glovera_KX250654.1, [11] 12 Phytophthora_mexicana_KX250675.1, [12] 13 Phytophthora_aysenensis_MN557839.1, [13] 14 Phytophthora_citricola_EU080240.1, [14] 15 Phytophthora_personensis_MT159417.1, [15] 16 Phytophthora_plurivora_KX250836.1, [16] 17 Phytophthora_pini_KX250815.1, [17] 18 Phytophthora_multivora_KX250780.1, [18] 19 Phytophthora_inflata_KX250773.1, [19] 20 Phytophthora_citricola_KX250752.1, [20] 21 Phytophthora_acerina_KX250717.1, [21] 22 Phytophthora_europaea_KX251527.1, [22] 23 Phytophthora_fragariae_HQ665150.1, [23] 24 Phytophthora_cambivora_EU080873.1, [24] 25 Phytophthora_alni_EU079598.1, [25] 26 Phytophthora_rubi_KX251569.1, [26] 27 Phytophthora_fragariae_KX251548.1, [27] 28 Phytophthora_sulawesiensis_EU080349.1, [28] 29 Phytophthora_mississippiae_KX251310.1, [29] 30 Phytophthora_bilorbang_KX251185.1, [30] 31 Phytophthora_gibbosa_KX251227.1, [31] 32 Phytophthora_gregata_KX251255.1, [32] 33 KPhytophthora_ornamentata_X251324.1, [33] 34 Phytophthora_borealis_KX251192.1, [34] 35 Phytophthora_gonapodyides_KX251241.1, [35] 36 Phytophthora_riparia_KX251352.1, [36] 37 Phytophthora_gonapodyides_EU080535.1, [37] 38 Phytophthora_lacustris_KX251276.1, [38] 39 Phytophthora_crassamura_KX251206.1, [39] 40 Phytophthora_megasperma_HQ665228.1, [40] 41 Phytophthora_megasperma_KX251290.1, [41] 42 Phytophthora_rosacearum_KX251450.1, [42] 43 Phytophthora_inundata_KX251158.1, [43] 44 Phytophthora_humicola_KX251144.1, [44] 45 'Phytophthora aquae-cooljarloo MT210485', [45] 46 Phytophthora_gemini_KX251130.1, [46] 47 Phytophthora_thermophila_MG920808.1, [47] 48 Phytophthora_amnicola_KX251172.1, [48] 49 Phytophthora_litoralis_KX251283.1, [49] 50 Phytophthora_fluvialis_KX251213.1, [50] 51 Phytophthora_thermophila_KX251359.1; TREE 'Fig. 7. Overview Phytophthora LSU phylogeny' = (2:0.3869293,1:0.003529156,(3:0.0004860527,4:0.0004823487,(5:0.006181578,((6:0.0004650832,7:0.0005209249):0.01031983,(8:0.0005092266,9:0.001534195,10:0.000486835,11:0.001175538,12:0.001562162,(13:0.0005905964,((15:0.0004872188,16:0.0004800454,17:0.0004619488,18:0.000477912,19:0.0004602691,20:0.0005214574,21:0.0005001599):0.001147076,14:0.0006370512):0.003221734):0.001184504):0.006171342):0.001177151):0.001215241):0.001396794,((22:0.001481412,(23:0.0004844329,24:0.0004672756,25:0.0004995099,26:0.000486297,27:0.0004744738):0.00159864):0.001589477,(28:0.003731531,(29:0.0004643398,30:0.003807384,31:0.001197405,32:0.001131803,33:0.001014367,(36:0.0004923478,(37:0.0005178915,38:0.0004522623):0.001152336):0.001717653,(42:0.002645086,((43:0.0004654583,44:0.0004944137):0.001194448,(45:0.002083409,46:0.004007218):0.001889335):0.001861663):0.003286476,34:0.0004856641,35:0.0004606843,(47:0.0005112921,(48:0.00115371,(49:0.0005084386,50:0.001179725,51:0.001839624):0.0011761):0.003607095):0.003573448,((40:0.0004916326,41:0.0004864847):0.001876404,39:0.002700565):0.003230993):0.002749656):0.003201736):0.001625405); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1630504892262; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2556017585375892443; tell It; setDefaultOrder 19 50 0 1 2 3 4 5 6 7 8 9 10 12 11 13 14 15 16 17 18 20 21 22 23 24 25 26 27 28 29 30 31 40 41 32 33 34 49 47 48 35 36 37 38 39 42 43 44 45 46; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2976584904658293808; mqVersion 361; checksumv 0 3 1045974289 null getNumChars 1383 numChars 1383 getNumTaxa 51 numTaxa 51 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 1479116.0 sumSquares -9.435740178003357E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 382; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1602 1060; setLocation 8 25; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #2556017585375892443 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #2556017585375892443; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1220 988; setLocation 8 25; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2556017585375892443 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 017ba0d9db4016; toggleUseWeights off; endTell; setAssignedID 2419.1630491240842.5439844041345854539; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1220 988; setLocation 8 25; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; setSelectedTaxonHighlightMode 1; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; setTaxonNameStyler #mesquite.trees.NoColorForTaxon.NoColorForTaxon; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(1:0.003529156,2:0.3869293,(3:0.0004860527,4:0.0004823487,(5:0.006181578,((6:0.0004650832,7:0.0005209249):0.01031983,(8:0.0005092266,9:0.001534195,10:0.000486835,11:0.001175538,12:0.001562162,(13:0.0005905964,(14:0.0006370512,(15:0.0004872188,16:0.0004800454,17:0.0004619488,18:0.000477912,19:0.0004602691,20:0.0005214574,21:0.0005001599):0.001147076):0.003221734):0.001184504):0.006171342):0.001177151):0.001215241):0.001396794,((22:0.001481412,(23:0.0004844329,24:0.0004672756,25:0.0004995099,26:0.000486297,27:0.0004744738):0.00159864):0.001589477,(28:0.003731531,(29:0.0004643398,30:0.003807384,31:0.001197405,32:0.001131803,33:0.001014367,34:0.0004856641,35:0.0004606843,(36:0.0004923478,(37:0.0005178915,38:0.0004522623):0.001152336):0.001717653,(39:0.002700565,(40:0.0004916326,41:0.0004864847):0.001876404):0.003230993,(42:0.002645086,((43:0.0004654583,44:0.0004944137):0.001194448,(45:0.002083409,46:0.004007218):0.001889335):0.001861663):0.003286476,(47:0.0005112921,(48:0.00115371,(49:0.0005084386,50:0.001179725,51:0.001839624):0.0011761):0.003607095):0.003573448):0.002749656):0.003201736):0.001625405);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2976584904658293808 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1220 988; setLocation 8 25; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;