NEXUS
[File created by TreeBASE:  7/26/07  20:55:18]
[Matrix accession#: M185c3x27x98c11c16c06]

BEGIN TAXA;
	TITLE M185c3x27x98c11c16c06;
	DIMENSIONS  NTAX=29;
	TAXLABELS
		Cycas_revoluta	Picea_abies	Pseudotsuga_menziesii	Ginkgo_biloba	Ephedra_major	Annona_PHYA	Aquilegia_PHYA	Arabidopsis_thaliana_PHYA	Austrobaileya_scandens_PHYA	Calycanthus_florida_PHYA	Canella_winterana_PHYA	Chloranthus_spicatus_PHYA	Hernandia_PHYA	Magnolia_PHYA	Nelumbo_PHYA	Sagittaria_PHYA	Sorghum_bicolor_PHYA	Annona_PHYC	Aquilegia_PHYC	Arabidopsis_thaliana_PHYC	Austrobaileya_scandens_PHYC	Calycanthus_florida_PHYC	Canella_winterana_PHYC	Chloranthus_spicatus_PHYC	Hernandia_PHYC	Magnolia_PHYC	Nelumbo_PHYC	Sagittaria_PHYC	Sorghum_bicolor_PHYC
	;
END;

BEGIN CHARACTERS;
	TITLE M185c3x27x98c11c16c06;
	DIMENSIONS NCHAR=1008;
	FORMAT  DATATYPE=DNA MISSING=? GAP=- MATCHCHAR=. ;
	MATRIX
		Cycas_revoluta                    ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GATGATCACGGTGAGGTATTCGCAGAAATTAGGAGATCTGATTTGGAGCCTTACTTGGGTCTGCATTATCCTGCCACTGATATTCCTCAAGCTTCCAGGTTTTTGTTTATGAAGAATAAAGTAAGGATGATCTGTGATTGTTATTCACCCCCAGTGAAAGTGATCCAGGATAAGAGATTGCCCAAGCCTTTGAGCTTGTGCGGCTCAACACTGCGGGCTCCCCATGGCTGCCATTCGCAGTACATGGCCAACATGGGTTCCATTGCATCTTTAGTGATGGCGGTGACCATCAATGAGAATGATGATGATATTGGAAAAGGAAGGAGACTTTGGGGTCTTCTGGTTTGCCATCACACGAGTCCCCGGTTTGTTCCATTTCCTTTGAGATATGCCTGTGAATTTTTGATGCAAGTGTTCGGGATTCAGCTGAACAAGGAGGTGGAGTTAGCTGCTCAATTGAGGGAGAAGCATATTTTACGAACTCAAACTGTGCTCTGTGATATGCTTCTTCGGGATGCCCCTGTTGGGATTGTTGCTCAGACACCCAACATC????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Picea_abies                       GAGCCTGTGATGCCTTCCGATGTGCCGGTATCTGCCGCTGGTGCACTGCAGTCATACAAGCTGGCTGCCAAGGCAATTTCTCGCTTGCAGTCTCTGCCCGGTGGAGATATTCGGTTGTTGTGTGACACTGTGGTGCAGGAGGTGCGGGAGCTTACTGGGTATGACCGTGTGATGGCATATCGATTTCACGAA.....A............G.T.....G..G..A...C.....C..........T................................C..G..............A..C........C.G...G..A.....T..C.......G.G.C..T..T.....T..A.....A..C..AC.G....G.C................T.....C...........A..T............G...................................C.G......T.A.....G.CA..........GC.....C.G..A...CA......AG...........CG................A.....A...G..A.C..G..C........G...............C..........T..T..A........A...........T..A.....C.....G...........A.....C.....CGTG...C..........C..............T.....A...........C..GT.......T........TATGGACCTTGTCAAATGTGACGGGGCTGCCTTATTATATGGGAAACGCCTTTGGCTCTTGGGGACCACTCCTACTGAGGCTCAGATACTGGACATTGCAGATTGGCTCCTCGAGCACCACAGAGATTCCACTGGTTTGAGTACCGACAGTCTTGCAGAAGCAGGCTATCCAGGAGCTGCATCACTAGGTGATGCAGTTTGTGGAATAGCTGCTGCCAGAATTACTTCCAAAGACTTCTTATTTTGGTTCAGGTCTCACACAGCG
		Pseudotsuga_menziesii             GAGCCTATTAAGCCTTCGGATGTTTCTACTTCTGCCATGGGAGCATTGCAATCCTATAAGCTAGCTGCAAAGGCCATATCGCGGTTGCAATCGATCCCTAGTGGAAATATTGGGCTACTGTGTGACATGATTGCACAAGAGGTGCATGAGCTTATGGGTTATGACCGCGTTATGGCTTATAAATTTCACGAT........T........GA.AT.T..G.................A..A.....T........A..C..C..C..A....................A..A.............G...C.G......A.....T........C.G.G....A..T..A.TC.....T.....C...........T.GAGAC.....T..T..T..G..T...T..A.A..A..T.....T......G.T..A.................C..T..A...........A.....T..AGTAG...C......G..A..G..CGCA.AT........A..G..A.....A..GG.......T........T.....A..C.A..................G.....T.....G..C...........T..T........T...........A..T..A..G...AT....A...AA.......GA.....G..C..C.....AT.......C..C.....G.....T.....A..CT.A..A.....CAG.....AG........AATGGATCTAGTCAAATCTGATGGTGCTGCT??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Ginkgo_biloba                     GAGCCCGTGAGAACTTTAGATGTACCTGTAACAGCTGCTGGTGCATTGCAATCTTACAAGCTCGCTGCCAAGGCCATATCTCGTTTGCAGTCTCTGCCTGGTGGAGATATTGGATTGTTGTGTGACATCGTTGTGCAGGAAGTTAGAGAACTTACGGGTTATGACCGGGTGATGACATATAAATTTCATGAA..A...........A..CG.A?....G..A..A.................C..T........C........C...........C........C.........???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????..T.....C................A.........G....AG........C...G...............TT.................T...........G..C.......................T..G.......................T..............G.......................C........C........C....................A..........................T......ATGGATCTTGTAAAATGTGATGGTGCTGCCCTGTTGTATGGGAAACGGCTTTGGCTATTGGGAATTACTCCTACTGAGGCTCAAATACAGGATATTGCTGAATGGCTTCTTGAGTACCACAAGGATTCCACGGGTTTGAGCACTGATAGTCTTGCAGAGGCAGGCTATCCAGGAGCTGTATCATTGGGTGATGCAGTTTGTGGAATGGCTGCTGCGAGAATAACCTCCAGAGACTTTCTGTTTTGGTTCAGGTCACACACTGCA
		Ephedra_major                     ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????.....C..T..A..A..TA..T.G..G..C...........CC.C........TC.C..C..T...........T......G.C.....G..G..GC................A..C.GG..G..A.....T...........C..T..A..G....G...C..T.....C......C..AAA..AGAGC....T..C.....T..T..T...A....A..T.....A..T...G.T..A........T..T.........G....C..AC.T..T.....C..C.T.G.G........G..A.....GGAA.C...G..G....AG........A..CG.C.....T.....T..AG....TA.A.....G........A...........T........CA.......G..T...A.C........C........A..T..A..G..CTGC..GA....A.....A..A..CC.CA....C.....AC.T..T..C...........CA.....A.....T.A..A..CA.CT.A..A.A...A.GT..A????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Annona_PHYA                       ????????????CCTTACGAAGTACCCATGACTGCTGCTGGTGCTCTCCAATCCTATAAGCTTGCTGCAAAAGCAATTGCTCGGCTACAAGCATTGCCCAGTGGGAATCTGCAGAAGCTGATTGATACAGTTGTTGAGGAAGTTTTTGAACTTACTGGGTATGACAGGGCAATGGCTTATAAGTTCCATGAT........T..G..A..CA.AT.......C.CA.AGC.A.GCC.A........TC.....T.......C..A........C..C.....G...G....A..C.....C........C..G..CC.A.....T........CA..G.CAAA..T.....G...TA.......G...AGC..AAGCTTGAG....CT.....T..T..G..T...A.A..G..T..CA.T.....C.T.A....T....AA...........T.....T...C.C..C.........GTT........A.GC..CA....AGA..AC...A...A......C.........G....C..T...A....A.C...AAA.........T..C...C..C.C............G..C..........T..T.CC..C..TG.T........AT....A..G.AAAA...GA.C..A.....A...???.....T..G.....AT....G............A.GA.A.........C.G..C.....AA.A..A.GC.........ATGGATCTTGTAAAATGTGATGGTGCTGCCCTTCTCTACAACAACAAGTTTTGGAGACTCGGTTTGACTCCATCTGAAGCACATATGCGTCATATTGTGTCGTGGCTCAACGAGTACCATATGGATTCCACTGGCTTAAGCACAGATAGCCTTCATGATGCAGGTTATCCTGGTGCCCTTGCTCTTGGTGATGCAGTATGTGGGATGGCTGCTGTGAGAATTACTTCCAAGGACATACTTTTCTGGTTCCGTACACACACTGCT
		Aquilegia_PHYA                    ????????????CCCTACGAGGTGCCTATGACTGCTGCTGGGGCTCTTCAGTCATATAAACTCGCTGCCAAAGCTATTGCACGGTTGCAGTCGTTGCCCAGTGGGAGCATAGACAGGTTGTGTGACACTGTGGTTGAAGAGGTGTTTCAGTTAACTGGTTATGACAGGGTGATGGCTTATAAATTTCACGAT........T..G.....TG.GT.T..G.C..CA.AGGAA.GCC.CCCA..A..T......T..........A.....A...........G..CG....A..C..A..C.....A.....GA.CC.A...............CG.G..AAG.AT..A.G...CC....A...G...A.C.A...TTCGAG....C......T..T.....C...A.A..C..A..CA.........TA.....T....AG.......A.........C...C.G..T.........GT...T.....TGGC.....A..AGAG..G..GA...A...G............G.T..C..T...A....T.CA..AA..........T......C.TC.G.....A.....G.....A..C.....C..T.CC..A..TG.C..T......T.T..A..G.AAAAC..GA.CCTT..A...A.C........T........AC.AT.G............A.G..AA....G...A.A..T......T....A.GT..T..T..AATGGATCTTGTCAAATGTGATGGGGCTGCTCTTCTATATCAAAATAAGATATGGAGGCTTGGTTTGTCCCCAAGTGAATCACATATACGTGATATCGCCTCATGGCTATCTGAGTACCACATGGATTCCACAGGTTTGAGTACAGATAGCCTGTATGATGCTGGCTTTCCAGGTGCTCTTTCTATTGGAGACACAGTGTGTGGGATGGCAGCTGTGAGAATTAATTCCAAGGACATGCTTTTCTGGTTTCGGTCTCACACTGCT
		Arabidopsis_thaliana_PHYA         GAACCCGTGAAGCCTTATGAAGTCCCCATGACAGCTGCTGGTGCCTTACAATCATACAAGCTCGCTGCCAAAGCAATCACTAGGCTGCAATCTTTACCCAGCGGGAGTATGGAAAGGCTTTGTGATACAATGGTTCAAGAGGTTTTTGAACTCACGGGGTATGACAGGGTGATGGCTTATAAGTTTCATGAA.................TG..T.C..GG...CA.A.C...GGC..........TC.T..G.................C..C..C........AG..C.T...C.............C..G..CC.......AGT......CA..G..AAA.AT.CT.GG...C.T..A...G.A.AGC.TT..TTTGACC.T.C......T.....C..C..TA.A..A..G..CA.........T....................A...A.........C.G..T........TGTAG.T..C...G.A....GA..AGGG.AT..GA...A......A......T.AG.......T..CA.T....C...GA.................C.C..G...........G...C.AGCT........T.CC..A..CG.C..T...........AC.C.A.AAC..GA..GT.......A.C.....G..C..G..G..AC.CT.G..C........GA.G..T.....T..AC.G..T.....GT.G..A.GC........AATGGACCTTGTGAAATGTGATGGAGCAGCTCTCTTGTATAAAGACAAGATATGGAAACTGGGAACAACTCCAAGTGAGTTCCACCTGCAGGAGATAGCTTCATGGTTGTGTGAATACCACATGGATTCAACGGGTTTGAGCACTGATAGTTTGCATGACGCCGGGTTTCCTAGGGCTCTATCTCTCGGGGATTCGGTATGTGGGATGGCAGCTGTGAGGATATCATCGAAAGACATGATTTTCTGGTTCCGTTCTCATACCGCT
		Austrobaileya_scandens_PHYA       ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ACGGGGTATGACCGGGTGATGGCTTATAGGTTTCACGAA........T........TG..T.T..G.....A.A...A..AC.A..A.....TC......................G.....C.....G..AG.TC.A........C........C..G..TC.T.....T..C.....CC..G.TAAAT....T.CG..TCAT..A...G...A.....AGTTTGAC..A.CG........T..G.....TA.A.....A..CA.T.......TA.....T.....G...........A.....T...C.G..T.....C...GTTG.G..C..AGGC..AC.A...GAG.A...GA...A...GT.A.....G..CG.C.........A.T..A.CC..AA..........T..C...C.TC.T...............C....C.....C..T.CT..C..TG.T..T.....AA....A...CAAAAC..G...CAA..A..AA.C........C.TG......C....A.....C.....A...A.A.....A..AC.A..T..A..AA.A....GT..T..T...ATGGATCTTGTAAAATGCGATGGGGCTGCAGTTTTGTATGGGAATAAGGTGTGGTTACTTGGCGTAACCCCGACGGAGTCGCAGATACAAGACATTGCTTCGTGGCTTTCTGAGTCTCACATGGACTCTACTGGTTTGAGCACTGATAGCCTCTTTGAGGCAGGTTATCCCGGAGCTTTGGCTCTCGGAGCTAAGGTTTGTGGCATGGCTGCCGTGAAGATAACTTTGAAAGACATGCTTTTCTGGTTTAGATCTCACACTGCT
		Calycanthus_florida_PHYA          ????????????CCTTATGAGGTGCCCATGACTGCTGCCGGAGCCTTGCAATCCTATAAGCTTGCAGCAAAGGCTATCACTCGGTTGCAATCACTGCCGAGTGGAAGCATGGAAAGGGTGGTTGATACTGTTGTTCAAGAGGTTTTTGAACTTACGGGGTATGATAGGGTGATGGCTTATAAGTTCCATGAA.....C..T........CA.TT.T.....C.CA.AGC...GCC.A..A.....TC.......A..C.....A..T........C..C......G......................C..G..GC.......T..C..C..CC..G..AAG..T.....G..TTG.......G...A...AA.ATTTGA.....CT..A..T..T..C..T..AA.A..A..A...A....T..C.TA..........AG.................T...C.G..T.....T...GTA........AGGG..A..A...GA..A..GGA.G.A...G..C.....G...G....C......A....T.C...AA..........C..C...C..C.......A.....G...C..........T..T.CT..C..TG.T.GT..A..AA.T..A....AGAAC..G..A.....A...A.C.....G..T..A..G..AT....T..C........C..GA.......T.T.C.G..A.....AA.A....GC.....T...ATGGATCTTGTGAAATGTGATGGGGCTTCCCTTTTGTATGGAAATAAGATGTGGCGTCTTGGTTTAACTCCAACTGAATCCCAAATACATGATATTGCCATGTGGGTCTCAGAGTATCACATGGATTCGACTGGTTTGAGTACAGACAGCCTGTATGATGCTGGCTATCCCAAGGCTCTTTCTATTGGTGATGTAGTTTGTGGGATGGCAGCTGTGAGGATAACTGCCAAGGACATGCTCTTTTGGTTCCGATCGCATGCTGCT
		Canella_winterana_PHYA            GAGCCGGTGAAGCCTTATGAAGCCCCCATGACTGCTGCTGGGGCTCTTCAATCTTATAAGCTTGCTGCAAAGGCAATAGCTCGATTGCAGTCTTTGCCCAGCGGAAGCATGAAGAGGTTGGTTGATACTGTTGTCCAAGAAGTTTTTGATCTTACTGGATATGACCGAGTGATGGCTTATAAGTTCCATGAA........T..G......A.AT....G....CA.AGC.A..CC.A..A......C.......A.........T....A.....C.....G...G.T..A....................G..TC.A.....A........CC..G.G.TT........G...TA...A...G.T.AGC.TA.TTTTGA.....CA..A..T..T.....TT..A....CG....CA....T.....A.....T.....A........C..T.....T..CC.G..T.....A...GTTG.T.....A.GA..G..A..AGA..AG..GAAG.A...G...........GG....C......A....A.C...GA..........T..C..C...C.............G...C.A........T..T.CC..C..TG.C..T......T.........AGAAC..GA.ACA...A...A.C........T..C..G..AC.A..T.....C......A.GA..TC...T...T.G.CT.....AA.A....AC.....T..AATGGACCTTGTAAAATGTGATGGTGCTTCCCTTCTATACCAAAGTAAGATTTGGCGTCTTGGTGTAGCTCCAACTGAGTCCCAGATACGTGACATTGCAAGATGGCTTTCCGATTGTCACATGGACTCTACTGGTTTGAGTACGGACAGCCTACATGATGCTGGCTATCCAGGGGCTCTATTGCTTGGTGATGTAGTTTGTGGGATGGCAGCTGTGAAGATAAATTCGAAGGACATGCCTTTCTGGTTCAGATCACATACTGCA
		Chloranthus_spicatus_PHYA         ????????????CCTTATGAGGTGCCTATGACTGCCGCGGGGGCTTTACAATCTTATAAGCTTGCTGCCAAGGCGATCGCTCGGTTGCAATCTTTACCTGGTGGAAGCATGGAAAAGTTGTGTGATACTGTTGTACAAGAGGTGTTTGAACTGACGGGTTACGATAGGGCTATGGCTTATAAGTTTCACGAA...........G.....CA..T......C..CA.AGC...GCC....A.....T........A........G.....A.....A..C.....CG.T...........C........C..G..TC................CC..G.GAAA..C.....G..CT..A..ATG..A.AGC..G.GTTTGA.....CA..A..T..T..G..TT..A.A..G..A...A.T..T..C..A..........TG......AA.........T...C.G..T....GCCGTGGTCGT..AAT..GGAGAAGAAGGCGATTG..GAAG.A...G..C.....G..GG.TA.C......A......AC..AA.AA.......C..C...C.CC................CC.............T.CT..C..TG.T??????????????????????????????????????????????????????????????????????????????A.GA.A.....A..GC....T.....AT.A....AT..G.....TTTGGATCTCGTTAAATGTGACGGTGCCGCTCTTCTTTACAATAAAAAGATATGGCGACTTGGGTTAACTCCAAGGGGTCTCAAATCCATGATATTTCCTTTCTGGCTTTCCGAGAATCACATGGATTCTACTGGTTTCAGTACGGATAGTTTGAACGACGCCAGGTATCCTGGGGCTGTCGCTATCGGTAATGCAGTTTGTGGGATGGCAGCTGTGTGGATAACTTCCAAGGACATGCTTTTCTGGTTCAGGTCGCACACTGCC
		Hernandia_PHYA                    GAGCCTGTGAAGCCTTACGAAGTGCCCATGACTGCTGCTGGTGCTCTGCAATCTTATAAGCTTGCAGCGAAGGCAATTGCACGGTTGCAATCATTGTCAAGTGGAAGCATGCAGAAGCTTGTTGATACAGTTGTGGAAGAGGTATATGAACTTACAGGGTATGATAGAGTGATGGCATACAAGTTCCACGAT.....C..T..G.....CA..T.T..G....A..AGC.A..CC.A.....C..T...........C.....A..T..C..C..C.....G..A........C..A..............G..TC................CA..ATGAAG..T..A..G..TTA..T....G.A.AG...A.AT.TGA.....C.C.A..T........T..TA.A..A.....CA....T..C.T......T.....A..T........A.....T...C.T..C.....T...GTT........AGGG..A..A..G.GGAT...GC...A...G........G...G....C.....C.....A.CA..AA..........C..C...C..C.G........C..G...C..........TG.T.CT.....TG....T.....AT.T...C.G.AAAAC..GA.TCA...A...A.C..C.....C..G..G..AT....T...........CT.GA.......T..CT.G.........A.A..A.GC.....T...ATGGATCTTGTAAAGTGTGATGGGGCTGCCCTTTTGTATGGGAATAAGATTTGGAAGCTTGGGACAACCCCAACAGAATTGCAGATACGTGATATTTCTTTGTGGCTTTCTGAGTATCACATGGACTCTACTGGTTTGAGTACCGATAGCTTATATGACGCAGGCTACCCAGGGGCCCTTTCTCTTGGCGACGCAATTTGTGGGATGGCAGCTGTGACGATAACACCAAAAGACTTTCTCTTTTGGTTCCGCTCACATACGGCT
		Magnolia_PHYA                     GAGCCTGTGAAGCCTTACGAAGTACCCATGACTGCTGCTGGTGCTCTTCAGTCTTACAAGCTTGCCGCAAAAGCAATTGCACGGTTGCAAGCTTTGTCCAGCGGTAGTATGGAGAAGCTGGTCGATACTGTTGTCCAAGAAGTCTTTGAACTTACAGGGTATGACAGGGTGATGGCCTATAAGTTCCATGAA........T..C..A..CA.AT....G..C.C..AGC.A.G.C.A..A.....TC.....T..........G.....G..C..C.....G...G......................C..G..CC.A........C.....CA..G..AAA..C.....G...TA.......G...AGC..A.GTTTGA.....C......T..T.....C..AA.A..G..T...A.......C..A.....T....AG......A..........T...C.G..T.........GTT........AGGG.TG.....AGAA.AG..GA.G.A...G..C.........G....C......A....A.C...GA..........T..C...C.AC.............G...C..........T....CT..C..TG.T.........T....A....AGAAC..GA.ACA...A...A.C..AC.......A..G..AT....T............T.GA.A.......T...A..C...AGAA.A....AC.....T...ATGGATCTTGTGAAATGCGACGGTGCTGCCCTTTTTTACAACAACAAGATTTGGCGACTCGGCTTAACTCCGACCGACTCCCAGATGCGTGACATCTCTGTATGGCTTTCTGAATATCACATGGATTCTACTGGCTTGAGTACGGATAGCCTTTATGATGCAGGTTATCCTGGGGCTCTTGCTCTTGGGGATGTGGTATGTGGGATGGCGGCTGTGAGGATAAATCCCAAGGACATGCTTTTCTGGTTCCGTTCACATACTGCT
		Nelumbo_PHYA                      ??????????????????GAGGTGCCTGTGACTGCTGCCGGAGCCCTCCAATCGTACAAGCTCGCTGCCAAGGCAATTGCAAGGCTGCAGGCATTGCCCAGTGGTTGTATGGATCGGCTGTGTGATACAGTTGTCCAAGAGGTTTTTGAGCTCACAGGCTATGATAGGGTGATGGCCTATAAATTTCATGAG.....C..T..G.....TG.TT.T..G..C.CA.A.C.A.GAC.T.....C........C...........A.....A..C..C..C..G..AG.A.....C..A..C........C..G..CC.T.....T........CCG.G..AAG.AT........TC.T..A...G.A.AGC.T..ATTTGA.C...C...A..T..G.....CT..A.A..C..A...A.......C.T...A..T....AG..T....A...A.....T...C.G..T.....A...GTTG.......AGGG.....A..AGG..AG..GC...A...G............G....C......A....A.C...AA.......A..T......C.AC.G...........G...C.A..C.....C..T.CC..C..TG.T..T......A.T..A....AAAAC..GA.TCTT......A.C...C....T........AC.T..G...........GA.G..A.....A...C.A..T...A.AT.A..A.GC..T..TG.AATGGACTTTGTAAAATGTGATGGCGCAGCCCTTTTGTACAAAAATAAGATCTGGCAGCTAGGAACAACTCCGACTGAATTCCAAATACATGATATAGCATCATGGCTCTCTGAGTATCACATGGATTCAACAGGTTTGAGTACAGACAGCTTCTATGACGCAGGATTTCCTGGGGCTCTTTCTCTTGGTGATGCAGTATGTGGGATGGCAGCTGTGAGGATAACATCAAAGGACATGCTTTTCTGGTTCCGTTCTCATACTGCT
		Sagittaria_PHYA                   ????????????CCTTACGAGGTGCCTATGACAGCCGCCGGGGCTCTTCAGTCTTATAAACTTGCTGCCAAGGCCATATCCCGGCTTCAGTCACTGCCGGGTGGAAGCATGCAGAAGCTGTGTGATACAGTAGTCCAAGAGGTCTTTGAACTCACAGGATATGATAGGGTGATGGCTTATAAGTTCCATGAG.....C..T..A..A...G.GT.G..GG.C.CA.AGC...GCC....C......C....AT................A..C.....C..G..GG.T..A.................C..G..CC.C..............CCG.G..AAA..T.....G...TAT..A...G...A.C..G..TTTGA.C.A.CA..T..T..A..C......A.A..C..A..CA.T.....CCT......T....AG..T....A...G.........C.............T.TAG.T..C...GGG.....A..AGA..A..GGA.G.A...G..C.....C...G.T..C.....CA...G..CC..A.....CA.C..T..C..............A.....G..CC.T.....G..C..T.CT..C..TG.T........AT.T.......AAAAC..GA..C.A.....AA.C..A...A....C..G..AC....G..C..C.....GT..A.......T.T.C....T..CA.AT.A....AT.....T..TATGGATCTGGTAAGATGTGATGGTGCTGCACTTGTATACCAAAGTAAGATTTGGAGGCTTGGCATGGCTCCAACTGAATCCCAGATATGTGACATTGCGGCTTGGCTTTCGGAGTATCACATGGACTCTACTGGCTTGAGTACGGACAGTTTACATGATGCTGGATATCCAGGTGTTCTAGCACTTGGTGATTCAGTCTGTGGGATGGCTGCTGCCAGGATAACATCCAAAGACATTCTTTTCTGGTTCAGGTCTCATACTGCT
		Sorghum_bicolor_PHYA              GAGCCTGTGAAGCCTACAGAATTTCCTGCCACTGCTGCTGGGGCTTTGCAGTCTTACAAGCTTGCTGCCAAGGCAATCTCCAAGATCCAGTCACTGCCAGGTGGAAGCATGGAGGCCTTATGCAATACCGTGGTTAAGGAAGTCTTTGAGCTTACAGGTTATGACAGGGTTATGGCTTACAAGTTCCATGAA.....G..T..G.....C..T..T..G..C.CC.A.C...G.A.T..A.....TC.A..C.....C.....A...........C.........G........C.C..C........C.....C..A..............CCG.G..AAAT.T.....GA.T..TG.A...G..GC.C.CT...TTGA.A.T........T..T.....T..TA.A..A..A...A....T..CCTT.....T....AG......AAC..G........CC.T..C.....T..TGTGG.T.....A.....A..G...GA..A...GAAG.A......G........CA.T........C..TGAA..C...A.A.A...C..G.....AC..C.G..............C...GCC........T.CTG.C..TG.A.........T.T..A..G.AGAAG..GA.AC.A.....AAGC...C.G....TG.....AA......C...C.....GT.CAA...A..A..CT.GA.T..C..AT..GG..GT..A..T...ATGGACCTAGTTAAGTGTGATGGTGCTGCTCTTTTGTATGGGGACAAAGTCTGGCGGCTTCAAACGGCTCCAACCGAGTCTCAGATACGTGATATTGCCTTCTGGCTTTCAGAAGTTCATGGGGATTCCACTGGCTTGAGTACTGATAGCCTCCAGGATGCTGGATATCCAGGAGCTGCTTCCCTTGGTGACATGATTTGTGGAATGGCAGTGGCTAAGATCACGTCCAAGGACATTCTTTTCTGGTTCAGGTCACATACAGCT
		Annona_PHYC                       GAGCCTGTGAATCCTGCTGATGTACCGGTAACTGCTGGTGGGGCATTGAAATCTTACAAACTTGCTGCCAAGGCCATTTCTAGGTTGCAGTCTTTGCCAAGTGGGAACATCCCTCTTTTGTGTGATGTCTTAGTCCGTGAAGTGAGTGAACTTACAGGTTATGATCGTGTGAAAGCATATAAGTTCCATGAA.....G..T..G..A...A.T..T..GTGCC.A..G..A..C.....A......C.C..AT..........G..A.....C.....A........G.....CC.A..C........C..G..T.........A....C....TG..C..G..C..T.....A.......GC...G....AG.AC....G.....T..A..T..A.....TT.AA.A.....T.....G..T...G.T...........................T....CC.T..C...T.T..C..A..TG.....G.CA.........CAT.C..G..CC....G........GT.GG....C........T..A..C..AA.......G.....C..............A.....G..CC..........T..T.TT..A.................T.....G.....C....CA..A...........CC.T.AG.TG..G..AA....G..C...........CA.......T............C..T.A..AT.T.....TG..ATGGACCTTGTTAATTGCAATGGAGCTGCCCTATACTACCAAAATCAGTTCTGGTTGCTTGGAACAACCCCTACTGAAGCTCAGATTAGAGATATAGTTGGATGGCTTTTGGAATACCACAATAGTACAACAGGTTTAAGTACTGACAGTCTTGTGGAAGCTGGCTATCCTGGTGCTGCTGAGCTTGGAGATGATGTTTGTGGTATGGCAGCTGTTAGAATTACCTCCAAGGACTTCCTCTTTTGGTTCAGATCACACACTGCA
		Aquilegia_PHYC                    GAGCCTGTGAACCCTGCTGATGTACCTGTAACTGCTGCTGGAGCAATGAAATCGTATAAACTTGCAGCTAAAGCTATATCTAAATTGCAGTCTTTGCCGAGTGGGAATATTCCATTTCTATGTGAAGTATTGGTTCAAGAGATTAGCGACTTGACAGGTTATGACAGAGTTATGGTTTATAAGTTTCATGAA........T..G..A..TA.A..T...TGG.A..T............A..A..TC.T..AT..........A..T..G.....A..A........G......C.T..C........C.....T..A.....T..G..C...AC.G.GG.A.....C.....A.....A....C..AT.....AC.A........TC.TG.T..G.........A.A.....T.....G..T...G.A.....T.....A..T........TG.A......C.C..A...T.A.....G........TG...........GAG.TG..G.......AGT.A.....GT.AG.A..A...........AT....TA.......C.....C...C.T........T.....G........A.........A.T..G...A.T..T.....A........G..CAGG..GC....A............C.C.AG..CA.G........T.....C.....A...A.......T...A.A......T.CA.C..AT....T...G.TATGGACCTTGTCAAATGCAATGGTGCTGCTCTGTACTACCACCAGAAATTTTGGTTGCTTGGAGTAACACCTACCGAAGCACAAATAAGAGATATAGTTGAGTGGCTTGTTGAGTACCACAATGCAAGTACAGGTTTGAGCACAGATAGTCTTGTGGAAGCTGGTTATCCAGGTGCTTCCATTCTTGGGAATGCAGTTTGTGGAATGGCTGCCGCTAAGATTACTTCGAAGGACTTCCTCTTCTGGTTTCGCTCACATACAGCT
		Arabidopsis_thaliana_PHYC         GAGCCTGTGAGTCCTGATGAGGTGCCTGTGACTGCTGCCGGGGCTTTAAGATCGTATAAGCTTGCGGCGAAATCGATTTCGAGGTTGCAGGCATTGCCTAGTGGGAATATGTTGTTGTTGTGTGATGCTTTGGTTAAGGAAGTTAGTGAATTAACTGGTTATGATAGGGTGATGGTGTATAAGTTCCATGAG....GG..T..G..A..GA.T..T...TGCT.CC.GGAA...A....A.....TC.T..GT.......CT.C..T........A..G........G..A...C.........GA..C..G..T........T..........CAG.GGTT..G..T.....CG.T..A........TC.CT.AC....AA.A..TC.T.CT..A..T..TT..A.A.....T.....T..T..CG.A.....T...AGT..T.....A..AG.G..G...C.T..C...T.T..A..T.......GT.G....AG....GAGATG.CT..C..ACACT.A.....CT.GG.......T......G.A.....TA.A........G.....A..AC.......T........C....CT.....A..T..CG.G...A.C.....A..A.C...A.C.....T..TG....AA.......G......G.A......G.G......A.....C......T.C..CA....A..AA.A..T..A..CA....AT....A..T..AATGGATCTTGTTAAATGTGATGGAGCAGCATTATATTACAGAGACAACCTCTGGTCTCTAGGAGTTACTCCCACAGAGACACAAATTAGAGATCTAATTGACTGGGTTCTCAAAAGTCATGGAGGAAACACTGGCTTTACCACTGAAAGTCTAATGGAGTCTGGCTATCCGGATGCTTCTGTTCTTGGGGAGTCAATATGTGGAATGGCTGCCGTATATATTTCCGAAAAAGATTTCCTTTTCTGGTTCCGGTCTAGCACTGCA
		Austrobaileya_scandens_PHYC       GAGCCAGTAAACCCTGCTGATGTTCCAATAACCGCCGCCGGAGCATTGAAATCCTATAAACTAGCTGCCAAAGCCATCTCTAGATTGCAATCTTTGCCCAGTGGAAACATTGGGCTTCTCTGTGATGTTTTGGTTCAAGAAGTTAGCGAGCTCACGGGTTACGACAGAGTCATGGCATATAAGTTTCATGAG.....A.....G..A..TA.T..G...TA.........CA....A..A......A.A..C..C.....C..C.....A.....C..C...........A........C........C.....T..A.....T..........T.G.T..G..GA.T.....A.....A..C....AG...G.AC.A..GC.T..T.....T...........TA.A..C..T..C..G......G.A...........A..T.....C..TG....T...C.T..C...T.TA.A..GG.......TG.......C..A.CCATC..G.....A.AG..G.....GT.GG....................T.GA.A..............AC.TC.......T.....G...C.T..A.....T..T.....A.....A.....A..A..T..A..G..A...TGGA.................C.G.A..TG......T....T..C........G...A.A..............C..CA.GA.C..AT....A..TG.GATGGATCTCATCAAATGTGATGGTGCGGCCCTTTATTATGGAAAACAGTTGTGGTTGCTTGGAACAACGCCCACAGAGGCTCAGATAAGAGATATTGCGGGATGGCTTCTTGAGTACCACGGTGGTACGACGGGTCTAAGCACGGATAGCCTCATGGAGGCAGGATATCCGGCTGCCGCTGCTCTGGGTGATGGTGTCTGTGGCATGGCCGCCGCCAAATTAACTTCCAAGGACTTCCTCTTTTGGTTCAGATCCCACACTGCA
		Calycanthus_florida_PHYC          GAACCAGTTAATCCTGATGATGTGCCTGTTACCGCTGCTGGTGCTCTGAAATCCTATAAGCTAGCTGCGAAAGCCATTTCAAAATTGCAGTCCTTGCCCAGTGGAAATATCTCACTTTTATGTGATGTCTTGGTCCGTGAAGTTAGTGAGCTTACAGGTTATGATCGCGTTATGGCGTATAAGTTCCATGAA........T.....A..GA.T..C...TG.C.......C........A.....TC.T...T.......C..G..A..A.................TC.C...C.T..C...........G..TC.......T.....C....TGG....T..T..T.....T.....A..C.....G...G.AC....AC.....C....T..G......T.AA.A.....A.....T..T...G.T..A........G..T...AAG..T..C..G..GC.T..T...T.T..T.TGG...................G.CA...G.........AG.........T.GG.T..?.....C.....A.C..ATA.......C..T?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????
		Canella_winterana_PHYC            GAGCCAGTGAATCCCACAGATGTACCAGTTACTGCTGCAGGTGCACTAAAATCATATAAACTGGCTGCTAAATCCATTTCAAGGTTGCAATCATTGCCCAGTGGAAATATCCAACTCTTGTGTGATGTCTTGGTTCGTGAAGTAAGTGACCTTACAGGTTATGATAGAGTGATGGCCTATAAGTTTCATGAA.....G..T..C..A..CA....T...TG......G......C.T..A.....TC.T...T.............T........C..A........A...........C...........G..C........T.........AG.G.C..T.....T.....A........C..A......G.AC.AT.AC..........T..A........CA.A.....T.....T..T...G.T...........T..T.....C..A.........C.T..AG..T.T.....AG...GC..AG..........G.CC.AG..........AG..A.....AT.GG.AA.C...........TT....TA.......G..C.....CC..........G.....G........T.....C..T..C..C...........A..A..T..T..G..AT.C...A.C..............GC.G..G..C..G..CA....T...........G...A.A.....T..A.....C.....AA.A..AT....T..TG.GATGGATCTTGTCAAGTGTGATGGTGCCGCTCTATATTACAAAAATCAATTTTGGTTGCTTGGGACAACACCAACAGAGGCTCAGATAAGAGACATCACTAACTGGCTAGTGGAGTACCACAACAGTACTACCGGGTTAAGTACAGATAGCTTGGCAGTAGCAGGCTACCCAGGTGCTTCTGTTCTAGGTGATGCAGTCTGTGGGATGGCTGCTGTTAAGTTTACTAACAAGGACCTTCTCTTTTGGTTCCGTTCTCATACAGCA
		Chloranthus_spicatus_PHYC         GAGCCGGTAAATCCCGCTGATGTACCAGTAACTGCCGCCGGAGCTTTGAAGTCGTATAAACTAGCTGCCAAAGCCATTTCTAGATTGCAGTCTTTGCCGAGTGGGAACATCTCTCTTTTGTGTGATGTATTGGTTCGCGAAGTGAGTGAGCTTATGGGTTATGATAGGGTGATGGCATATAAATTCCACGAA..C..G...........GA.T..C..GTGCC....GGTC..............TC.C..CT.......C..G..T..C.....C........A..A..A...C.T..C........C..G..T........T..........CCG..G.T..G..T.....A.....A..C..A......GGGC....G.....T..A..T..G.....G..A........T..C..A..T...G.T.T.........T..T.....A............C.C......T.C..A..G.........G.......C..A.CCAAG..CC.G....AGT.G.....GT.GG.A.....T........A...A.T.....C.CC..G.....A....................CC..T.A.....T...A.CT.A..A...........A..C..A.....C.GCTC.A.TGA..GAG.AA....G..GA...TG.....CC....T..C..C..............CA.....AC...A...T.AA.A..AT.G..T...G.AATGGATCTCGTTAAGTGTGACGGCGCGGCCCTATATTACCGAAATCAGTTTTGGTTGTTCGGCACGACCCCTACGGATGTGCAGATAAGAGATATGGCTGAATGGCTTCTCGAGTGCCACGATGGTAGTACGGGTTTGAGTACGGATAGCCTCATGGAAGCGGGTTATCCGTGTGCTTCCATTCTGGGCAATGCGGTTTGTGGGATGGCTGCCGTTAAAATTACTTCGAAGGACTTCCTCTTTTGGTTCCGATCTCATACGGCA
		Hernandia_PHYC                    GAGCCTGTTAACCCTGCTGAGGTGCCAGTGACTGCTGCTGGGGCCCTCAAGTCATATAAGCTGGCTGCCAAAGCCATTTCACTGTTGCTGTCATTGCCTAGTGGAAATATTTCAGTTCTATGTGATGTCTTGGTCTGTGAAGTTAGCGATCTTACAGGGTATGATCGTGTGATGGCATATAAATTTCATGAA.....G..T.....A..GA.T..T...TG.T.C...C................TC.T..GT.A.....C..A..A........C...........GC.....C....C...........G..TC.......T.....C....CCG.CTT...C..T..G..TG....A..C....AG...G.AC.A..AC.A........T..A.....C...A.A..CG.A.....T..T...G.T..A..T.....T..T....AC..TG........C.TA.....T.T.....A....T...AG.......C..GG.G.....G.....A.AG..C......T.GG....G.....C.....T..C..AA.......C..C..A..CC.TC.............G..A.....A.....T..T..C..G...T....T..A.....T.....G..CAAC...A.................C..A.G.TG..GG......CA..............G.....CA.G.....G.....CA.GA.A.G.T....A..T...ATGGATCTTGTTAAGTGTGATGGGGCTGCATTGTATTACCACAATCAGTTTTGGTTGCTTGGAATAAACCCTACTGAAGCTCAAATAAGGGATATAGCCAGATGGCTGCTAGAGCGCCATAATGGCAGTACTGGTTTAAGTACAGATAGCCTGATGGAAGCTGGCTATCCAGGTGCATCATTTTTGGGCAATGCAGTTTGTGGGATGGCTGCTGTGAGAATTTCATCTAATGACTTCCTCTCCTGGTTCAGATCACATACTGCA
		Magnolia_PHYC                     GAGCCTGTGAATCCCGCCGATGTGCCGGTTACTGCTGCTGGAGCACTGAGATCGTACAAACTCACTGCCAAGGCCATTTCTAGGTTGCAGTCTTTGCCAAGTGGGAATATCTCGCTTTTGTGCGATGTCTTGGTCCGTGAAGTAAGCGAGCTTACAGGCTATGATCGTGTGATGGCATACAAATTTCATGAA.....A..T.....A...A.T..C...TGCC..G....A...............C.T..CT..........A..G..C..C..C..G........A......C....C....G......G..TC.......A..C..C....TGG.G.....C..T...........A..C....A....G.AC....G....T.........G..C..G...A.A..C..T.....T.....CG.C...........A..T.....G.....C.....CC.T......T.T.....G.........G.........G.GA.AC..G.A.G..A.AG........G..GG.T........C........C..AA.T..C..C.....C..GC..C.......G.....G......G.A...........C..A..............A..C...C.GC.C.....GA.............C..CC....G.TG..G......T....C............A....C.....A..C.....CA.AA.A..AT........G.GATGGATCTTGTTAAGTGTGATGGGGCCGCCTTCTACTACCGAAATCAGTTCCGGTTGCTCGGAACAACCCCCACGGAAGCTCAGATTAGAGATATAGCTGGATGGCTTTTGGAATACCATGATGGTACAACGGGTTTAAGTACGGATAGCCTTACAGAAGCCGGATATCCCGGTGCTGCTGATCTTGGAGATGATGTTTGTGGGATGGCCGCCATTAAAATCACCTCCAAGGACTATCTCTTTTGGTTCAGGTCACATACAGCA
		Nelumbo_PHYC                      GAGCCAGTGAATCCTGCTGATGTTCCAGTAACTGCTGCTGGGGCACTGAAATCCTACAAGCTTGCAGCCAAGGCTATATCCAACTTGCAATCTTTGCCTAGTGGAAATATATCGCTTTTGTGTAATGTATTGGTTCGGGAAGTTAGTGATCTGACAGGTTATGATAGGATAATGGTGTATAAGTTTCACGAA.....A..T..C..A..GA.T..T..GTGCC.....C.G....................CT.......C..A..T........A..A........A.....CC.C..C........C..G..C..............C....CAG....G.....A...A.A.....A..C....A....G.AC.A..C......C.C..T..G..T......A.A.....T.....G.....CG.T..A...........T..................C.T..AT.AT.T.....A.....C...G....CA....C..G.AC..G.......AG..G.....CT.GG.A..?...........A..C..TA.......C..C..C........G...........G......G.A.....T..T..T..A..A..TG.......A..A..A..G..A..C..G....................GAAG..C..G...C....T..C..C.....C..CA.AA....T.....G......T..A.CG..T.......TG.GATGGATCTTGTTAAGTGTGATGGTGCCTCACTCTACTACAAGAACAAATTTTGGTTGCTTGGTATCACCCCTACAGAGGCTCAAATAAGAGATATAGCTGGATGGCTTCTTGAGCACCATGATGGAAGTACTGGTTTAAGCACAGATAGCCTCATGGAAGCTGGCTACCCTGGTGCTTCAGTTCTTGGGGATGCAGTTTGTGGAATGGCAGCCATTAAGATTACTTCGAAGGATTTCTTATTTTGGTTCCGATCGCATACAGCC
		Sagittaria_PHYC                   GAGCCAGTTAACCTGTCAGATGTGCCGGTGACGGCAGCCGGAGCACTCAAATCCTACAAACTGGCAGCAAAAGCCATATCCAGGTTGCAGTCCTTGTCAAGCGGGAACATCTCCCTCTTATGCGACGTCCTGGTCCGGGAAGTGAGGGATCTTACTGGTTATGGCAGGGTGATGGCCTACAAATTCCATGAG.....G..T.....A..CA..T.C..GTC.C....G..C...C...........C.C..CT....C..A.....T..C.................G......A.A...........C..GC.T...........C..C..CAC.G.C.AA........G...........C....AG..CA.AC....A.....T.....T..A..T..CT.AA.A..A..T............G.C.............................C..CC.C......T.T.CC..A..A.G...CG.A.....A...GA..CC...A.G....AG..C.....AT.GG....G.......T...C.....TA.A...........C..AA.C........T.....G.....T........T..T.CC..C..AT....T.....A.....A..G.....C..GACA.T.......T....C..CA.G..A..G..GT.T..T.........T.A...A.......A.....A..C..CT.CA.A..AT....A..TGC.ATGGATATTGTGAAATGTGATGATGCAGCCCTTTATTACAAGAACCAATTCTGGTTGCTTGGAATAACACCTGCAGAGGGTCAAATAAGAGGTATTGCTGGGTGGCTTAGAGATTGCCACAATACTACCACAGGCTTAAGTACTGACAGTCTGACAGAGGCAGGTTATCGCGGTGCTTCAACTCTAGGCGATGCTGTTTGTGGAATGACTGCTATAAAATTCACTAGCAGAGATTTCATTTTTTGGTTCCGATCGCACACAGCA
		Sorghum_bicolor_PHYC              GAGCCGGTCAACCCAGTTGACGTGCCAGTCACTGCTGCGGGTGCGCTTAAGTCGTACAAGCTCGCCGCCAAGGCCATCTCCAGGCTGCAGTCGCTGCCCAGCGGGAACCTGTCGCTGCTGTGCGATGTGCTTGTCCGTGAGGTGAGCGAGCTCACGGGCTATGACCGGGTCATGGCGTACAAGTTCCATGAG.....G..T........CA.TT.C..GTGC.....G......C.......G..TC.T..C.....C..C..A.....C..C..C..G..G..G........C..............C.....G........A........C.C.G.CA.T.TG.....GA.C..T......G.T..CC.AG.AC.....C.C...C.C..T..T..C..C..CA.....T.......T......G.A...........A...........TG.......GC.T......T.A.....T..A.GCA.TG....G..G..AGA..TT.....C....A...G.....G..GG.C..C........T..A..C..GA....C..C..T..C..AC.A..G..C..T..C..G...C.CT.......A..T..C..A.....A..............A..G........GGCA.A.....G...C..CC.CA....G.....CC.T..T..G........C..G........T...........AT..A.C...T....T..TG.GATGGATCTAGTAAAGTGCGATGGAGTTGCATTGTATTACCAGAACCAGCTTTTGTTGCTCGGATCAACACCCTCCGAGTCAGAGATAAAGAGCATTGCCACATGGCTGCAGGAGAACCATGATGGTTCAACTGGGCTGAGTACTGACAGCTTAGTGGAAGCAGGTTATCCTGGTGCTGCTGCACTTCGTGAAGTTGTGTGTGGCATGGCGGCTATAAAGATCTCTTCCAAAGATTTTATCTTCTGGTTCCGATCGCACACAACA
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