#NEXUS [written Tue Dec 01 14:05:26 CET 2020 by Mesquite version 3.61 (build 927) at 2017-15-inch-MacBook-Pro.local/192.168.2.86] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=174; TAXLABELS Diplodia_africana_CBS_120835 Diplodia_africana_CBS_121104 Diplodia_afrocarpi_CBS_131681 Diplodia_agrifolia_CBS_132777 Diplodia_agrifolia_CBS_132778 Diplodia_agrifolia_CBS_132779 Diplodia_agrifolia_CBS_132841 Diplodia_allocellula_CBS_130408 Diplodia_allocellula_CBS_130410 Diplodia_arengae_MFLU_17_2769 Diplodia_bulgarica_CBS_124135 Diplodia_bulgarica_CBS_124136 Diplodia_bulgarica_CBS_124254 Diplodia_citricarpa_CBS_124713 Diplodia_citricarpa_CBS_124714 Diplodia_citricarpa_CBS_124715 Diplodia_corticola_Bot_08 Diplodia_corticola_CAA_499 Diplodia_corticola_CAA_691 Diplodia_corticola_CBS_112071 Diplodia_corticola_CBS_112072 Diplodia_corticola_CBS_112073 Diplodia_corticola_CBS_112074 Diplodia_corticola_CBS_112547 Diplodia_corticola_CBS_112548 Diplodia_corticola_CBS_112549 Diplodia_corticola_CBS_112550 Diplodia_corticola_CBS_112551 Diplodia_corticola_CBS_112552 Diplodia_corticola_UCROK_1482 Diplodia_corticola_UCROK_946 Diplodia_cupressi_CBS_120691 Diplodia_cupressi_CBS_120692 Diplodia_cupressi_CBS_120693 Diplodia_cupressi_CBS_121027 Diplodia_cupressi_CBS_168.87 Diplodia_cupressi_CBS_261.85 Diplodia_cupressi_CBS_684.79 Diplodia_eriobotryicola_CBS_140851 'Diplodia eriobotryicola CPC_29680' Diplodia_estuarina_CBS_131682 Diplodia_estuarina_CBS_139666 Diplodia_estuarina_CBS_139668 Diplodia_fraxini_CBS_136010 Diplodia_fraxini_CBS_136011 Diplodia_fraxini_CBS_136012 Diplodia_fraxini_CPC_34847 Diplodia_fraxini_CPC_34848 Diplodia_fraxini_CPC_34849 Diplodia_fraxini_CPC_35401 Diplodia_gallae_BL36 Diplodia_gallae_BL37 Diplodia_gallae_CBS_119935 Diplodia_gallae_Dg1 Diplodia_gallae_CBS_163.33 Diplodia_gallae_CBS_211.25 Diplodia_gallae_CBS_212.25 Diplodia_gallae_CBS_213.25 Diplodia_malorum_BL127 Diplodia_malorum_CBS_112554 Diplodia_malorum_CBS_124129 Diplodia_malorum_CBS_124130 Diplodia_malorum_CBS_124253 Diplodia_mutila_CBS_112553 Diplodia_mutila_CBS_112875 Diplodia_mutila_CBS_120834 Diplodia_mutila_CBS_125.37 Diplodia_mutila_CBS_136014 Diplodia_mutila_CBS_136015 Diplodia_mutila_CBS_136016 Diplodia_mutila_CBS_136017 Diplodia_mutila_CBS_255.79 Diplodia_mutila_was_pyri_CBS_121862 Diplodia_mutila_was_pyri_CPC_29891 Diplodia_neojuniperi_B0032 Diplodia_neojuniperi_CBS_138652 Diplodia_olivarum_CAP257 Diplodia_olivarum_CBS_121886 Diplodia_olivarum_CBS_121887 Diplodia_pseudoseriata_CBS_124906 Diplodia_pseudoseriata_CBS_124907 Diplodia_pseudoseriata_CBS_125527 Diplodia_pseudoseriata_was_alatafructa_CBS_124931 Diplodia_pseudoseriata_was_alatafructa_CBS_124932 Diplodia_pseudoseriata_was_alatafructa_CBS_124933 Diplodia_pseudoseriata_was_insularis_BN_55 Diplodia_pseudoseriata_was_insularis_CBS_140350 Diplodia_quercivora_CBS_133852 Diplodia_quercivora_CBS_133853 Diplodia_rosulata_CBS_116470 Diplodia_rosulata_CBS_116472 Diplodia_sapinea_CBS_114863 Diplodia_sapinea_CBS_117348 Diplodia_sapinea_CBS_119938 Diplodia_sapinea_CBS_121105 Diplodia_sapinea_CBS_129172 Diplodia_sapinea_CBS_136778 Diplodia_sapinea_CBS_138184 Diplodia_sapinea_CBS_295.38 Diplodia_sapinea_CBS_393.84 Diplodia_sapinea_CBS_591.84 Diplodia_sapinea_CPC_29861 Diplodia_sapinea_CPC_32394 Diplodia_sapinea_was_intermedia_CBS_112556 Diplodia_sapinea_was_intermedia_CBS_124134 Diplodia_sapinea_was_intermedia_CBS_124462 Diplodia_sapinea_was_rosacearum_CBS_141915 Diplodia_sapinea_was_rosacearum_NB8 Diplodia_scrobiculata_CBS_109944 Diplodia_scrobiculata_CBS_113297 Diplodia_scrobiculata_CBS_113423 Diplodia_scrobiculata_CBS_117836 Diplodia_scrobiculata_CBS_118110 Diplodia_scrobiculata_CBS_139796 Diplodia_scrobiculata_CMW_189 Diplodia_scrobiculata_CMW_4900 Diplodia_scrobiculata_was_guayanensis_CBS_119939 Diplodia_scrobiculata_was_guayanensis_CBS_129749 Diplodia_scrobiculata_was_guayanensis_CBS_129750 Diplodia_scrobiculata_was_guayanensis_CBS_129760 Diplodia_seriata_CBS_100565 Diplodia_seriata_CBS_106.84 Diplodia_seriata_CBS_110488 Diplodia_seriata_CBS_110498 Diplodia_seriata_CBS_110854 Diplodia_seriata_CBS_110868 Diplodia_seriata_CBS_110870 Diplodia_seriata_CBS_110878 Diplodia_seriata_CBS_110879 Diplodia_seriata_CBS_112555 Diplodia_seriata_CBS_112661 Diplodia_seriata_CBS_112876 Diplodia_seriata_CBS_113506 Diplodia_seriata_CBS_113509 Diplodia_seriata_CBS_113511 Diplodia_seriata_CBS_113525 Diplodia_seriata_CBS_114793 Diplodia_seriata_CBS_114796 Diplodia_seriata_CBS_114797 Diplodia_seriata_CBS_119049 Diplodia_seriata_CBS_119130 Diplodia_seriata_CBS_121106 Diplodia_seriata_CBS_121107 Diplodia_seriata_CBS_121108 Diplodia_seriata_CBS_121109 Diplodia_seriata_CBS_121110 Diplodia_seriata_CBS_121425 Diplodia_seriata_CBS_121485 Diplodia_seriata_CBS_121884 Diplodia_seriata_CBS_121885 Diplodia_seriata_CBS_124137 Diplodia_seriata_CBS_124138 Diplodia_seriata_CBS_124139 Diplodia_seriata_CBS_129227 Diplodia_seriata_CBS_134016 Diplodia_seriata_CBS_134700 Diplodia_seriata_CBS_134701 Diplodia_seriata_CBS_140890 Diplodia_seriata_CBS_140891 Diplodia_seriata_CBS_177.26 Diplodia_seriata_CBS_215.25 Diplodia_seriata_CBS_585.50 Diplodia_seriata_CPC_29849 Diplodia_seriata_CPC_30266 Diplodia_seriata_CPC_30268 Diplodia_seriata_CPC_30978 Diplodia_seriata_CPC_35496 Diplodia_sp._1_CBS_678.88 Diplodia_sp._1_UCD1275So Diplodia_subglobosa_CBS_124131 Diplodia_subglobosa_CBS_124132 Diplodia_subglobosa_CBS_124133 Diplodia_tsugae_CBS_418.64 Lasiodiplodia_theobromae_CBS_164.96 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=276; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Diplodia_africana_CBS_120835 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCGCTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_africana_CBS_121104 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCGCTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_afrocarpi_CBS_131681 CACGTTTTCTCCGCTCCTGCACGTGTGCA-G------------------TGCTGCTGCGCCCAGCCCGTCCTGTC-----GCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCACGCGCTAAGCCTCGTCTGAGCTCGGCAAAGTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTGGCGAAAAATGCTCTGGCCACTCACGT--CCTCGTACGACCACAAGCTAACGCGCGCCACCACAGGAAGCCG Diplodia_agrifolia_CBS_132777 AGGATTTCTCCTGCTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCGCAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_agrifolia_CBS_132778 AGGATTTCTCCTGCTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCGCAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_agrifolia_CBS_132779 AGGATTTCTCCTGCTCCAGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGCACGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCGCAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_agrifolia_CBS_132841 AGGATTTCTCCTGCTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCGCAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_allocellula_CBS_130408 AGGATTTTTTCCGCTCCCGCACTG-------------------------------TGTGCACAGCCCACTTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGT---TTTTTGCGACCGGCGTCAAGCCGATGCGCCCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACTACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_allocellula_CBS_130410 AGGATTTTTTCCGCTCCCGCACTG-------------------------------TGTGCACAGCCCACTTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGT---TTTTTGCGACCGGCGTCAAGCCGATGCGCCCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACTACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_arengae_MFLU_17_2769 CCGATTGTTCCCGCTCCTGCACGTGTGCA-G------------------TGCTGCTGCGCACAGCCCGTCTTATCTAT-CGCGCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG-TTTTTTTGCGACCGGCGTGAGGCCGACACGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCAGGTGCTCTCGTACGACCACAGGCTAACGCACGCCACTACAGGAAGCCG Diplodia_bulgarica_CBS_124135 AGGACTTTTCCCGCCCCTGCACGCGGGCG-G------------------CGCTGCTGCGCACAGCCCGTCTTATCTGC-CGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGCCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG---CCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_bulgarica_CBS_124136 AGGACTTTTCCCGCCCCTGCACGCGGGCG-G------------------CGCTGCTGCGCACAGCCCGTCTTATCTGC-CGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGCCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG---CCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_bulgarica_CBS_124254 AGGACTTTTCCCGCCCCTGCACGCGGGCG-G------------------CGCTGCTGCGCACAGCCCGTCTTATCTGC-CGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGCCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG---CCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_citricarpa_CBS_124713 AGGCTTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTGTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_citricarpa_CBS_124714 AGGTTTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTGTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_citricarpa_CBS_124715 AGGTTTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTGTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_corticola_Bot_08 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CAA_499 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CAA_691 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAATCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112071 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112072 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112073 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112074 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112547 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112548 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112549 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112550 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112551 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_CBS_112552 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_UCROK_1482 CCGATTGTTCCCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_corticola_UCROK_946 CCGATTGTTCTCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC-TTTTTTTGCGACCGGCGTCAGGCCGACACG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_cupressi_CBS_120691 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_120692 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_120693 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_121027 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_168.87 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_261.85 AGGCTTTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_cupressi_CBS_684.79 AGGCATTTTCC-GCCCCTGCCCGTGTGCG-G------------------TGCCGCTGCGCACAGCCCGTCTTATCTCC-CGCCCCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_eriobotryicola_CBS_140851 AGGATTTTTCCCGCTCCCGCACCG-------------------------------TGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGT---TTTTTGCGACCGGCGTCAAGCCGATGCG-CCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG 'Diplodia eriobotryicola CPC_29680' AGGATTTTTCCCGCTCCCGCACCG-------------------------------TGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGT---TTTTTGCGACCGGCGTCAAGCCGATGCG-CCCCTCACTAGCGAGAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_estuarina_CBS_131682 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTTG--TTTTTTGCGACCGGT------------CG-CCCCTCACTAGCGAGAAATGGCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_estuarina_CBS_139666 ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????--???????????????????????????????????????????--???????CGACCGGT------------CG-CCCCTCACTAGCGAGAAATGGCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_estuarina_CBS_139668 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTTG--TTTTTTGCGACCGGT------------CG-CCCCTCACTAGCGAGAAATGGCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_fraxini_CBS_136010 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CBS_136011 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CBS_136012 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CPC_34847 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CPC_34848 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CPC_34849 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_fraxini_CPC_35401 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_gallae_BL36 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_BL37 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_CBS_119935 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_Dg1 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_CBS_163.33 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_CBS_211.25 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTT-GTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_CBS_212.25 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_gallae_CBS_213.25 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_malorum_BL127 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCCCGGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_malorum_CBS_112554 AGGATTTTTCCCGTTCCCGCACGTGTGCACG------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTC--GTGCTCTCGTACGACCCCGGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_malorum_CBS_124129 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCCCGGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_malorum_CBS_124130 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCCCGGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_malorum_CBS_124253 AGGATTTTTCCCGTTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTC--GTGCTCTCGTACGACCCCGGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_112553 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_112875 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_120834 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_125.37 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_136014 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_136015 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_136016 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_136017 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_CBS_255.79 AGGATTTTTCCCGCTCCCGCACGTGTGCA-GTGCTGCTGCTGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_was_pyri_CBS_121862 AGGATTTTCCCCGCTCCCGCACGTGTGCA-G---------TGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_mutila_was_pyri_CPC_29891 AGGATTTTCCCCGCTCCCGCACGTGTGCA-G---------TGCTGCTGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_neojuniperi_B0032 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TCATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_neojuniperi_CBS_138652 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TCATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAACAGGAAGCCG Diplodia_olivarum_CAP257 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G------------TGCTGCTGCCGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAAATGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGTGCGCCACAACAGGAAGCCG Diplodia_olivarum_CBS_121886 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G------------TGCTGCTGCCGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGTGCGCCACAACAGGAAGCCG Diplodia_olivarum_CBS_121887 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G------------TGCTGCTGCCGCTGCGC----------TTATCTGC-CGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGTGCGCCACAACAGGAAGCCG Diplodia_pseudoseriata_CBS_124906 AGGATTTTTCCCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_pseudoseriata_CBS_124907 AGGATTTTTCTCGTTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_pseudoseriata_CBS_125527 AGGATTTTTCCCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTATC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--ATTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_pseudoseriata_was_alatafructa_CBS_124931 AGGATTTTTCCCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCGCCCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_pseudoseriata_was_alatafructa_CBS_124932 AGGATTTTTCCCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCGCCCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_pseudoseriata_was_alatafructa_CBS_124933 AGGATTTTTCTCGTTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_pseudoseriata_was_insularis_BN_55 AAGATTTTTCTCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAACACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_pseudoseriata_was_insularis_CBS_140350 AAGATTTTTCTCGCTCCCGCAC---------------------------------TGTGCACAGCCCACCTTAAC-----GCT-TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAACACCCCGACCACTCATGTGCTCTCGTACGACCAAAGGCTAACGCACGCCACAATAGGAAGCCG Diplodia_quercivora_CBS_133852 CTGATTATTCCCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACACCCCGTCTCCTC-----GTCCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATGCCTTGACCACTCATGTGCTCTCGTGTGACCATAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_quercivora_CBS_133853 CTGATTATTCCCGCTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACACCCCGTCTCCTC-----GTCCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGC--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGAAATGCCTTGACCACTCATGTGCTCTCGTGTGACCATAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_rosulata_CBS_116470 AGGATTTTCCCCGCTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGC-TTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCAACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAATAGGAAGCCG Diplodia_rosulata_CBS_116472 AGGATTTTCCCCGCTCCCGCACGTGTGCA-G------------------TGCTGCTGCGC----------TTATCTGC-CGC-TTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCAACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCACAATAGGAAGCCG Diplodia_sapinea_CBS_114863 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_117348 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_119938 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_121105 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_129172 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_136778 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_138184 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_295.38 ???????????????????????????????????????????????????????????????GCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_393.84 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CBS_591.84 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CPC_29861 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_CPC_32394 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGGTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_was_intermedia_CBS_112556 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCCCAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_was_intermedia_CBS_124134 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGTCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCGCAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_was_intermedia_CBS_124462 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCCCAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_was_rosacearum_CBS_141915 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCC-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCGCTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sapinea_was_rosacearum_NB8 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCC-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCGCTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_109944 AGGATTTTTCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_113297 ??????????????????????????????????????????????????????????????????CACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_113423 AGGATTTTTCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_117836 AGGATTTTTCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_118110 ??????????????????????????????????????????????????????????????????CACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CBS_139796 AGGATTTTTCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CMW_189 ?????????????????????????????????????????????????????????????????TCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_CMW_4900 ?????????????????????????????????????????????????????????????????TCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--GTTTTTGCGACCGGCGGCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_was_guayanensis_CBS_119939 AGGATCTTCCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_was_guayanensis_CBS_129749 AGGATTTTCCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_was_guayanensis_CBS_129750 AGGATCTTCCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_scrobiculata_was_guayanensis_CBS_129760 AGGATCTTCCCTGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAACGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_100565 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_106.84 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110488 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110498 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110854 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110868 ???????????????CCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110870 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110878 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_110879 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_112555 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_112661 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_112876 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_113506 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_113509 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_113511 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_113525 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_114793 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_114796 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_114797 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_119049 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_119130 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121106 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121107 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121108 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121109 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121110 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121425 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121485 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121884 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_121885 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_124137 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_124138 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_124139 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_129227 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_134016 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_134700 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_134701 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_140890 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_140891 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_177.26 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_215.25 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CBS_585.50 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CPC_29849 AGGATTTTTCCTGCTCCCGCACCG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTGCGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CPC_30266 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CPC_30268 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CPC_30978 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_seriata_CPC_35496 AGGATTTTTCCCGCTCCCGCACTG-------------------------------CGTGCACAGCCCACCTTATC-----GCT-CGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCG-CCCCTCACTAGCGAGCAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCACGCCACAACAGGAAGCCG Diplodia_sp._1_CBS_678.88 CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_sp._1_UCD1275So CCGATTATTCCCACTCCTGCACGTGTGCG-G------------------TGCTGCTGCGCACAGCCCGTCTTATC-AT-CGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCC--CGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCG-CCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCG Diplodia_subglobosa_CBS_124131 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------CGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCCCAACAGGAAGCCG Diplodia_subglobosa_CBS_124132 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAATCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCCCAACAGGAAGCCG Diplodia_subglobosa_CBS_124133 AGGATTTTTCCCGCTCCCGCACGTGTGCA-G---------------TGCTGCTGCTGCGC----------TTATCTGC-CGCCGTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAATCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGCTCTCGTACGACCACAGGCTAACGCGCGCCCCAACAGGAAGCCG Diplodia_tsugae_CBS_418.64 AGGACTTTTGCCGCCCCTGCACGCGG------------------------------GCGCACAGCCCGCCTTATCTGC-CGCTCTGCTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGCGTCAGGCCGATGCG-CCCCTCGCTAGCGAAAAATGGCCCGACCACTCATGTGCTCTCGTACGACGGCAGGCTAACGCGCGCCACAACAGGAAGCCG Lasiodiplodia_theobromae_CBS_164.96 TAACCCCTCTCGACTTCGGCGCTG---CA-G------------------CGCTGCGGCGCACAGTCCGCCTTATC-----GCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCC--CGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTACCGTCGTACGAGCAAAGGCTAACGCGCCCCACTACAGGAAGCCG ; END; BEGIN mrbayes; outgroup Lasiodiplodia_theobromae_CBS_164.96_T; charset locus1 = 1 -276; partition AllLoci = 1 : locus1; log start filename = DiplodiaTEFMB.log; END; BEGIN mrbayes; set partition = AllLoci; prset applyto = ( 1 ) statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); Lset applyto = ( 1 ) nst = 2 rates = gamma; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 1000000000 nchains = 4 printfreq = 10 temp = 0.2 samplefreq = 10 savebrlens = yes stoprule = yes stopval = 0.01 Relburnin = yes BurninFrac = 0.25 filename = DiplodiaTEFMB; mcmc; sump; sumt; END; BEGIN TREES; Title 'Trees from "S2B_DiplodiaTEFMB.nexus"'; ID 01761de8668e31; LINK Taxa = Taxa; TRANSLATE [0] 1 Diplodia_africana_CBS_120835, [1] 2 Diplodia_africana_CBS_121104, [2] 3 Diplodia_afrocarpi_CBS_131681, [3] 4 Diplodia_agrifolia_CBS_132777, [4] 5 Diplodia_agrifolia_CBS_132778, [5] 6 Diplodia_agrifolia_CBS_132779, [6] 7 Diplodia_agrifolia_CBS_132841, [7] 8 Diplodia_allocellula_CBS_130408, [8] 9 Diplodia_allocellula_CBS_130410, [9] 10 Diplodia_arengae_MFLU_17_2769, [10] 11 Diplodia_bulgarica_CBS_124135, [11] 12 Diplodia_bulgarica_CBS_124136, [12] 13 Diplodia_bulgarica_CBS_124254, [13] 14 Diplodia_citricarpa_CBS_124713, [14] 15 Diplodia_citricarpa_CBS_124714, [15] 16 Diplodia_citricarpa_CBS_124715, [16] 17 Diplodia_corticola_Bot_08, [17] 18 Diplodia_corticola_CAA_499, [18] 19 Diplodia_corticola_CAA_691, [19] 20 Diplodia_corticola_CBS_112071, [20] 21 Diplodia_corticola_CBS_112072, [21] 22 Diplodia_corticola_CBS_112073, [22] 23 Diplodia_corticola_CBS_112074, [23] 24 Diplodia_corticola_CBS_112547, [24] 25 Diplodia_corticola_CBS_112548, [25] 26 Diplodia_corticola_CBS_112549, [26] 27 Diplodia_corticola_CBS_112550, [27] 28 Diplodia_corticola_CBS_112551, [28] 29 Diplodia_corticola_CBS_112552, [29] 30 Diplodia_corticola_UCROK_1482, [30] 31 Diplodia_corticola_UCROK_946, [31] 32 Diplodia_cupressi_CBS_120691, [32] 33 Diplodia_cupressi_CBS_120692, [33] 34 Diplodia_cupressi_CBS_120693, [34] 35 Diplodia_cupressi_CBS_121027, [35] 36 Diplodia_cupressi_CBS_168.87, [36] 37 Diplodia_cupressi_CBS_261.85, [37] 38 Diplodia_cupressi_CBS_684.79, [38] 39 Diplodia_eriobotryicola_CBS_140851, [39] 40 'Diplodia eriobotryicola CPC_29680', [40] 41 Diplodia_estuarina_CBS_131682, [41] 42 Diplodia_estuarina_CBS_139666, [42] 43 Diplodia_estuarina_CBS_139668, [43] 44 Diplodia_fraxini_CBS_136010, [44] 45 Diplodia_fraxini_CBS_136011, [45] 46 Diplodia_fraxini_CBS_136012, [46] 47 Diplodia_fraxini_CPC_34847, [47] 48 Diplodia_fraxini_CPC_34848, [48] 49 Diplodia_fraxini_CPC_34849, [49] 50 Diplodia_fraxini_CPC_35401, [50] 51 Diplodia_gallae_BL36, [51] 52 Diplodia_gallae_BL37, [52] 53 Diplodia_gallae_CBS_119935, [53] 54 Diplodia_gallae_Dg1, [54] 55 Diplodia_gallae_CBS_163.33, [55] 56 Diplodia_gallae_CBS_211.25, [56] 57 Diplodia_gallae_CBS_212.25, [57] 58 Diplodia_gallae_CBS_213.25, [58] 59 Diplodia_malorum_BL127, [59] 60 Diplodia_malorum_CBS_112554, [60] 61 Diplodia_malorum_CBS_124129, [61] 62 Diplodia_malorum_CBS_124130, [62] 63 Diplodia_malorum_CBS_124253, [63] 64 Diplodia_mutila_CBS_112553, [64] 65 Diplodia_mutila_CBS_112875, [65] 66 Diplodia_mutila_CBS_120834, [66] 67 Diplodia_mutila_CBS_125.37, [67] 68 Diplodia_mutila_CBS_136014, [68] 69 Diplodia_mutila_CBS_136015, [69] 70 Diplodia_mutila_CBS_136016, [70] 71 Diplodia_mutila_CBS_136017, [71] 72 Diplodia_mutila_CBS_255.79, [72] 73 Diplodia_mutila_was_pyri_CBS_121862, [73] 74 Diplodia_mutila_was_pyri_CPC_29891, [74] 75 Diplodia_neojuniperi_B0032, [75] 76 Diplodia_neojuniperi_CBS_138652, [76] 77 Diplodia_olivarum_CAP257, [77] 78 Diplodia_olivarum_CBS_121886, [78] 79 Diplodia_olivarum_CBS_121887, [79] 80 Diplodia_pseudoseriata_CBS_124906, [80] 81 Diplodia_pseudoseriata_CBS_124907, [81] 82 Diplodia_pseudoseriata_CBS_125527, [82] 83 Diplodia_pseudoseriata_was_alatafructa_CBS_124931, [83] 84 Diplodia_pseudoseriata_was_alatafructa_CBS_124932, [84] 85 Diplodia_pseudoseriata_was_alatafructa_CBS_124933, [85] 86 Diplodia_pseudoseriata_was_insularis_BN_55, [86] 87 Diplodia_pseudoseriata_was_insularis_CBS_140350, [87] 88 Diplodia_quercivora_CBS_133852, [88] 89 Diplodia_quercivora_CBS_133853, [89] 90 Diplodia_rosulata_CBS_116470, [90] 91 Diplodia_rosulata_CBS_116472, [91] 92 Diplodia_sapinea_CBS_114863, [92] 93 Diplodia_sapinea_CBS_117348, [93] 94 Diplodia_sapinea_CBS_119938, [94] 95 Diplodia_sapinea_CBS_121105, [95] 96 Diplodia_sapinea_CBS_129172, [96] 97 Diplodia_sapinea_CBS_136778, [97] 98 Diplodia_sapinea_CBS_138184, [98] 99 Diplodia_sapinea_CBS_295.38, [99] 100 Diplodia_sapinea_CBS_393.84, [100] 101 Diplodia_sapinea_CBS_591.84, [101] 102 Diplodia_sapinea_CPC_29861, [102] 103 Diplodia_sapinea_CPC_32394, [103] 104 Diplodia_sapinea_was_intermedia_CBS_112556, [104] 105 Diplodia_sapinea_was_intermedia_CBS_124134, [105] 106 Diplodia_sapinea_was_intermedia_CBS_124462, [106] 107 Diplodia_sapinea_was_rosacearum_CBS_141915, [107] 108 Diplodia_sapinea_was_rosacearum_NB8, [108] 109 Diplodia_scrobiculata_CBS_109944, [109] 110 Diplodia_scrobiculata_CBS_113297, [110] 111 Diplodia_scrobiculata_CBS_113423, [111] 112 Diplodia_scrobiculata_CBS_117836, [112] 113 Diplodia_scrobiculata_CBS_118110, [113] 114 Diplodia_scrobiculata_CBS_139796, [114] 115 Diplodia_scrobiculata_CMW_189, [115] 116 Diplodia_scrobiculata_CMW_4900, [116] 117 Diplodia_scrobiculata_was_guayanensis_CBS_119939, [117] 118 Diplodia_scrobiculata_was_guayanensis_CBS_129749, [118] 119 Diplodia_scrobiculata_was_guayanensis_CBS_129750, [119] 120 Diplodia_scrobiculata_was_guayanensis_CBS_129760, [120] 121 Diplodia_seriata_CBS_100565, [121] 122 Diplodia_seriata_CBS_106.84, [122] 123 Diplodia_seriata_CBS_110488, [123] 124 Diplodia_seriata_CBS_110498, [124] 125 Diplodia_seriata_CBS_110854, [125] 126 Diplodia_seriata_CBS_110868, [126] 127 Diplodia_seriata_CBS_110870, [127] 128 Diplodia_seriata_CBS_110878, [128] 129 Diplodia_seriata_CBS_110879, [129] 130 Diplodia_seriata_CBS_112555, [130] 131 Diplodia_seriata_CBS_112661, [131] 132 Diplodia_seriata_CBS_112876, [132] 133 Diplodia_seriata_CBS_113506, [133] 134 Diplodia_seriata_CBS_113509, [134] 135 Diplodia_seriata_CBS_113511, [135] 136 Diplodia_seriata_CBS_113525, [136] 137 Diplodia_seriata_CBS_114793, [137] 138 Diplodia_seriata_CBS_114796, [138] 139 Diplodia_seriata_CBS_114797, [139] 140 Diplodia_seriata_CBS_119049, [140] 141 Diplodia_seriata_CBS_119130, [141] 142 Diplodia_seriata_CBS_121106, [142] 143 Diplodia_seriata_CBS_121107, [143] 144 Diplodia_seriata_CBS_121108, [144] 145 Diplodia_seriata_CBS_121109, [145] 146 Diplodia_seriata_CBS_121110, [146] 147 Diplodia_seriata_CBS_121425, [147] 148 Diplodia_seriata_CBS_121485, [148] 149 Diplodia_seriata_CBS_121884, [149] 150 Diplodia_seriata_CBS_121885, [150] 151 Diplodia_seriata_CBS_124137, [151] 152 Diplodia_seriata_CBS_124138, [152] 153 Diplodia_seriata_CBS_124139, [153] 154 Diplodia_seriata_CBS_129227, [154] 155 Diplodia_seriata_CBS_134016, [155] 156 Diplodia_seriata_CBS_134700, [156] 157 Diplodia_seriata_CBS_134701, [157] 158 Diplodia_seriata_CBS_140890, [158] 159 Diplodia_seriata_CBS_140891, [159] 160 Diplodia_seriata_CBS_177.26, [160] 161 Diplodia_seriata_CBS_215.25, [161] 162 Diplodia_seriata_CBS_585.50, [162] 163 Diplodia_seriata_CPC_29849, [163] 164 Diplodia_seriata_CPC_30266, [164] 165 Diplodia_seriata_CPC_30268, [165] 166 Diplodia_seriata_CPC_30978, [166] 167 Diplodia_seriata_CPC_35496, [167] 168 Diplodia_sp._1_CBS_678.88, [168] 169 Diplodia_sp._1_UCD1275So, [169] 170 Diplodia_subglobosa_CBS_124131, [170] 171 Diplodia_subglobosa_CBS_124132, [171] 172 Diplodia_subglobosa_CBS_124133, [172] 173 Diplodia_tsugae_CBS_418.64, [173] 174 Lasiodiplodia_theobromae_CBS_164.96; TREE Fig._S2B._Bayesian_phylogeny_of_the_Diplodia_tef1_alignment. = (174:0.04727179,3:0.02037792,((10:0.003431187,((((168:0.0009735266,169:0.001021452,56:0.001008625,57:0.0009895603,58:0.001017129,51:0.001085511,52:0.0009648995,53:0.001001243,54:0.0008907521,55:0.001024162):0.005434086,(88:0.001060055,89:0.001079139):0.01391422):0.003938295,30:0.0009755302):0.004115922,(19:0.002375341,25:0.000947574,27:0.0009712761,29:0.0009382132,21:0.001070738,23:0.001043786,24:0.0009259788,26:0.001092171,20:0.001068191,22:0.00104774,17:0.001054531,18:0.001026786,28:0.001070455,31:0.001018569):0.003411021):0.01453035):0.01213723,(((173:0.01152009,(11:0.001051644,12:0.001077675,13:0.0009416145):0.002847969):0.006713672,(36:0.001020402,37:0.0009107908,34:0.001035614,35:0.001029922,38:0.002429088,32:0.001023014,33:0.001008576):0.009671082):0.0039109,(((4:0.0009612151,5:0.001007353,6:0.002329718,7:0.001008132):0.005472242,((75:0.001139445,76:0.00109111):0.00249967,(170:0.00237224,(171:0.001057944,172:0.001106894):0.00251264):0.002536517,67:0.000888054,72:0.0009454468,64:0.001016003,66:0.001034875,69:0.0009845151,70:0.001024299,71:0.000991833,65:0.0009295387,68:0.0009885321,(73:0.001122348,74:0.001154184):0.002542359):0.002432733,(90:0.001072795,91:0.00103293):0.005627336,(59:0.0008989664,60:0.001108926,61:0.001002075,62:0.0009984672,63:0.0009416195):0.006104512,(1:0.001089337,2:0.001093412):0.002671959,(77:0.002412404,78:0.001036002,79:0.000950014):0.004078203,46:0.00112447,47:0.0009591388,48:0.001092496,49:0.001051967,50:0.001039101,44:0.001105805,45:0.001026513):0.006438742,((((8:0.001136155,9:0.001055587):0.005752434,(40:0.001095376,39:0.001103692):0.002436729):0.0041029,((41:0.00106939,42:0.001325518,43:0.00105422):0.006967079,(14:0.002112053,(15:0.001002204,16:0.001108844):0.002008632):0.004287071,(((92:0.001089881,93:0.001069542,94:0.00104176,95:0.001007605,103:0.001016353,100:0.001036975,96:0.001030541,97:0.001109664,98:0.0009715188,99:0.001067553,101:0.001220968,102:0.001111527):0.002478637,(107:0.001025182,108:0.001036472):0.003942457,(104:0.001030348,106:0.001130926):0.002515807,105:0.003880189,(((118:0.001034652,117:0.001117968,119:0.001063009,120:0.0009307384,113:0.001282428,115:0.002576313):0.002250035,(116:0.002675835,112:0.001033765,114:0.001111533,109:0.001097917,110:0.001052121,111:0.001015044):0.004266411):0.002828531,(121:0.001098574,128:0.001025891,133:0.001012083,136:0.00110109,139:0.001121606,144:0.001078659,158:0.00110749,146:0.001061054,163:0.0009675153):0.002802901):0.002743257,132:0.0009525593,143:0.001041005,145:0.0009784053,160:0.001034894):0.003691239,137:0.001054097,154:0.001054919,155:0.001033832,140:0.0009594982,149:0.00104158,150:0.001048418,156:0.001035756,122:0.001000775,123:0.001084874,126:0.001084779,127:0.001090789,129:0.0009811809,131:0.001060722,135:0.001049259,138:0.0009979512,147:0.001102561,124:0.001078148,125:0.001037617,130:0.0009930145,134:0.0009909072,141:0.001017137,142:0.001068285,148:0.001099253,151:0.001037177,152:0.001066738,153:0.0009202076,157:0.0009910904,159:0.0009379637,161:0.001078895,162:0.001088163,166:0.00102498,167:0.001053419,164:0.001078349,165:0.001078872):0.002514887):0.003817078):0.003196689,(82:0.002493849,(80:0.0009679779,83:0.0009957867,84:0.000943566,((86:0.0009668356,87:0.001066854):0.003878215,(81:0.0009953347,85:0.001052528):0.004027677):0.002492193):0.004045926):0.005595822):0.01121613):0.003484468):0.007988029):0.01145945); END; BEGIN TREES; Title 'Trees from "S2B_DiplodiaTEFMB.nexus"'; ID 01761de8669832; LINK Taxa = Taxa; TRANSLATE [0] 1 Diplodia_africana_CBS_120835, [1] 2 Diplodia_africana_CBS_121104, [2] 3 Diplodia_afrocarpi_CBS_131681, [3] 4 Diplodia_agrifolia_CBS_132777, [4] 5 Diplodia_agrifolia_CBS_132778, [5] 6 Diplodia_agrifolia_CBS_132779, [6] 7 Diplodia_agrifolia_CBS_132841, [7] 8 Diplodia_allocellula_CBS_130408, [8] 9 Diplodia_allocellula_CBS_130410, [9] 10 Diplodia_arengae_MFLU_17_2769, [10] 11 Diplodia_bulgarica_CBS_124135, [11] 12 Diplodia_bulgarica_CBS_124136, [12] 13 Diplodia_bulgarica_CBS_124254, [13] 14 Diplodia_citricarpa_CBS_124713, [14] 15 Diplodia_citricarpa_CBS_124714, [15] 16 Diplodia_citricarpa_CBS_124715, [16] 17 Diplodia_corticola_Bot_08, [17] 18 Diplodia_corticola_CAA_499, [18] 19 Diplodia_corticola_CAA_691, [19] 20 Diplodia_corticola_CBS_112071, [20] 21 Diplodia_corticola_CBS_112072, [21] 22 Diplodia_corticola_CBS_112073, [22] 23 Diplodia_corticola_CBS_112074, [23] 24 Diplodia_corticola_CBS_112547, [24] 25 Diplodia_corticola_CBS_112548, [25] 26 Diplodia_corticola_CBS_112549, [26] 27 Diplodia_corticola_CBS_112550, [27] 28 Diplodia_corticola_CBS_112551, [28] 29 Diplodia_corticola_CBS_112552, [29] 30 Diplodia_corticola_UCROK_1482, [30] 31 Diplodia_corticola_UCROK_946, [31] 32 Diplodia_cupressi_CBS_120691, [32] 33 Diplodia_cupressi_CBS_120692, [33] 34 Diplodia_cupressi_CBS_120693, [34] 35 Diplodia_cupressi_CBS_121027, [35] 36 Diplodia_cupressi_CBS_168.87, [36] 37 Diplodia_cupressi_CBS_261.85, [37] 38 Diplodia_cupressi_CBS_684.79, [38] 39 Diplodia_eriobotryicola_CBS_140851, [39] 40 'Diplodia eriobotryicola CPC_29680', [40] 41 Diplodia_estuarina_CBS_131682, [41] 42 Diplodia_estuarina_CBS_139666, [42] 43 Diplodia_estuarina_CBS_139668, [43] 44 Diplodia_fraxini_CBS_136010, [44] 45 Diplodia_fraxini_CBS_136011, [45] 46 Diplodia_fraxini_CBS_136012, [46] 47 Diplodia_fraxini_CPC_34847, [47] 48 Diplodia_fraxini_CPC_34848, [48] 49 Diplodia_fraxini_CPC_34849, [49] 50 Diplodia_fraxini_CPC_35401, [50] 51 Diplodia_gallae_BL36, [51] 52 Diplodia_gallae_BL37, [52] 53 Diplodia_gallae_CBS_119935, [53] 54 Diplodia_gallae_Dg1, [54] 55 Diplodia_gallae_CBS_163.33, [55] 56 Diplodia_gallae_CBS_211.25, [56] 57 Diplodia_gallae_CBS_212.25, [57] 58 Diplodia_gallae_CBS_213.25, [58] 59 Diplodia_malorum_BL127, [59] 60 Diplodia_malorum_CBS_112554, [60] 61 Diplodia_malorum_CBS_124129, [61] 62 Diplodia_malorum_CBS_124130, [62] 63 Diplodia_malorum_CBS_124253, [63] 64 Diplodia_mutila_CBS_112553, [64] 65 Diplodia_mutila_CBS_112875, [65] 66 Diplodia_mutila_CBS_120834, [66] 67 Diplodia_mutila_CBS_125.37, [67] 68 Diplodia_mutila_CBS_136014, [68] 69 Diplodia_mutila_CBS_136015, [69] 70 Diplodia_mutila_CBS_136016, [70] 71 Diplodia_mutila_CBS_136017, [71] 72 Diplodia_mutila_CBS_255.79, [72] 73 Diplodia_mutila_was_pyri_CBS_121862, [73] 74 Diplodia_mutila_was_pyri_CPC_29891, [74] 75 Diplodia_neojuniperi_B0032, [75] 76 Diplodia_neojuniperi_CBS_138652, [76] 77 Diplodia_olivarum_CAP257, [77] 78 Diplodia_olivarum_CBS_121886, [78] 79 Diplodia_olivarum_CBS_121887, [79] 80 Diplodia_pseudoseriata_CBS_124906, [80] 81 Diplodia_pseudoseriata_CBS_124907, [81] 82 Diplodia_pseudoseriata_CBS_125527, [82] 83 Diplodia_pseudoseriata_was_alatafructa_CBS_124931, [83] 84 Diplodia_pseudoseriata_was_alatafructa_CBS_124932, [84] 85 Diplodia_pseudoseriata_was_alatafructa_CBS_124933, [85] 86 Diplodia_pseudoseriata_was_insularis_BN_55, [86] 87 Diplodia_pseudoseriata_was_insularis_CBS_140350, [87] 88 Diplodia_quercivora_CBS_133852, [88] 89 Diplodia_quercivora_CBS_133853, [89] 90 Diplodia_rosulata_CBS_116470, [90] 91 Diplodia_rosulata_CBS_116472, [91] 92 Diplodia_sapinea_CBS_114863, [92] 93 Diplodia_sapinea_CBS_117348, [93] 94 Diplodia_sapinea_CBS_119938, [94] 95 Diplodia_sapinea_CBS_121105, [95] 96 Diplodia_sapinea_CBS_129172, [96] 97 Diplodia_sapinea_CBS_136778, [97] 98 Diplodia_sapinea_CBS_138184, [98] 99 Diplodia_sapinea_CBS_295.38, [99] 100 Diplodia_sapinea_CBS_393.84, [100] 101 Diplodia_sapinea_CBS_591.84, [101] 102 Diplodia_sapinea_CPC_29861, [102] 103 Diplodia_sapinea_CPC_32394, [103] 104 Diplodia_sapinea_was_intermedia_CBS_112556, [104] 105 Diplodia_sapinea_was_intermedia_CBS_124134, [105] 106 Diplodia_sapinea_was_intermedia_CBS_124462, [106] 107 Diplodia_sapinea_was_rosacearum_CBS_141915, [107] 108 Diplodia_sapinea_was_rosacearum_NB8, [108] 109 Diplodia_scrobiculata_CBS_109944, [109] 110 Diplodia_scrobiculata_CBS_113297, [110] 111 Diplodia_scrobiculata_CBS_113423, [111] 112 Diplodia_scrobiculata_CBS_117836, [112] 113 Diplodia_scrobiculata_CBS_118110, [113] 114 Diplodia_scrobiculata_CBS_139796, [114] 115 Diplodia_scrobiculata_CMW_189, [115] 116 Diplodia_scrobiculata_CMW_4900, [116] 117 Diplodia_scrobiculata_was_guayanensis_CBS_119939, [117] 118 Diplodia_scrobiculata_was_guayanensis_CBS_129749, [118] 119 Diplodia_scrobiculata_was_guayanensis_CBS_129750, [119] 120 Diplodia_scrobiculata_was_guayanensis_CBS_129760, [120] 121 Diplodia_seriata_CBS_100565, [121] 122 Diplodia_seriata_CBS_106.84, [122] 123 Diplodia_seriata_CBS_110488, [123] 124 Diplodia_seriata_CBS_110498, [124] 125 Diplodia_seriata_CBS_110854, [125] 126 Diplodia_seriata_CBS_110868, [126] 127 Diplodia_seriata_CBS_110870, [127] 128 Diplodia_seriata_CBS_110878, [128] 129 Diplodia_seriata_CBS_110879, [129] 130 Diplodia_seriata_CBS_112555, [130] 131 Diplodia_seriata_CBS_112661, [131] 132 Diplodia_seriata_CBS_112876, [132] 133 Diplodia_seriata_CBS_113506, [133] 134 Diplodia_seriata_CBS_113509, [134] 135 Diplodia_seriata_CBS_113511, [135] 136 Diplodia_seriata_CBS_113525, [136] 137 Diplodia_seriata_CBS_114793, [137] 138 Diplodia_seriata_CBS_114796, [138] 139 Diplodia_seriata_CBS_114797, [139] 140 Diplodia_seriata_CBS_119049, [140] 141 Diplodia_seriata_CBS_119130, [141] 142 Diplodia_seriata_CBS_121106, [142] 143 Diplodia_seriata_CBS_121107, [143] 144 Diplodia_seriata_CBS_121108, [144] 145 Diplodia_seriata_CBS_121109, [145] 146 Diplodia_seriata_CBS_121110, [146] 147 Diplodia_seriata_CBS_121425, [147] 148 Diplodia_seriata_CBS_121485, [148] 149 Diplodia_seriata_CBS_121884, [149] 150 Diplodia_seriata_CBS_121885, [150] 151 Diplodia_seriata_CBS_124137, [151] 152 Diplodia_seriata_CBS_124138, [152] 153 Diplodia_seriata_CBS_124139, [153] 154 Diplodia_seriata_CBS_129227, [154] 155 Diplodia_seriata_CBS_134016, [155] 156 Diplodia_seriata_CBS_134700, [156] 157 Diplodia_seriata_CBS_134701, [157] 158 Diplodia_seriata_CBS_140890, [158] 159 Diplodia_seriata_CBS_140891, [159] 160 Diplodia_seriata_CBS_177.26, [160] 161 Diplodia_seriata_CBS_215.25, [161] 162 Diplodia_seriata_CBS_585.50, [162] 163 Diplodia_seriata_CPC_29849, [163] 164 Diplodia_seriata_CPC_30266, [164] 165 Diplodia_seriata_CPC_30268, [165] 166 Diplodia_seriata_CPC_30978, [166] 167 Diplodia_seriata_CPC_35496, [167] 168 Diplodia_sp._1_CBS_678.88, [168] 169 Diplodia_sp._1_UCD1275So, [169] 170 Diplodia_subglobosa_CBS_124131, [170] 171 Diplodia_subglobosa_CBS_124132, [171] 172 Diplodia_subglobosa_CBS_124133, [172] 173 Diplodia_tsugae_CBS_418.64, [173] 174 Lasiodiplodia_theobromae_CBS_164.96; TREE 'Fig. S2B (bootstrap support values overlayed). First of 1000 equally most parsimonious trees of the Diplodia tef1 alignment.' = ((3:14,((10:4,((((173:7,(((8:0.0,9:0.0):4,(40:0.0,39:0.0):1):2,((((41:0.0,43:0.0):0.0,42:0.0):15,(82:1,(80:0.0,(83:0.0,84:0.0):1,((86:0.0,87:0.0):2,(81:0.0,85:0.0):2):1):2):6):1,((14:1,15:0.0,16:0.0):2,(((92:0.0,93:0.0,94:0.0,95:0.0,103:0.0,100:0.0,96:0.0,97:0.0,98:0.0,99:0.0,101:0.0,102:0.0):1,(107:0.0,108:0.0):2,(104:0.0,106:0.0):1,105:2,((((118:0.0,(117:0.0,119:0.0,120:0.0):1):0.0,113:0.0):1,115:1,((116:0.0,110:0.0):1,112:0.0,114:0.0,109:0.0,111:0.0):2):1,(121:0.0,128:0.0,133:0.0,136:0.0,139:0.0,144:0.0,158:0.0,146:0.0,163:0.0):1):1,132:0.0,143:0.0,145:0.0,160:0.0):2,137:0.0,154:0.0,155:0.0,140:0.0,149:0.0,150:0.0,156:0.0,122:0.0,123:0.0,126:0.0,127:0.0,129:0.0,131:0.0,135:0.0,138:0.0,147:0.0,124:0.0,125:0.0,130:0.0,134:0.0,141:0.0,142:0.0,148:0.0,151:0.0,152:0.0,153:0.0,157:0.0,159:0.0,161:0.0,162:0.0,166:0.0,167:0.0,164:0.0,165:0.0):1):1):2):17):11,(11:0.0,12:0.0,13:0.0):3):5,(36:0.0,37:0.0,34:0.0,35:0.0,38:1,32:0.0,33:0.0):6):4,(((4:0.0,5:0.0,6:2,7:0.0):3,(((((75:0.0,76:0.0):1,(170:1,(171:0.0,172:0.0):1):1):0.0,(((67:0.0,72:0.0,64:0.0,66:0.0,69:0.0,70:0.0,71:0.0,65:0.0,68:0.0):9,(73:0.0,74:0.0):1):3,(77:1,78:0.0,79:0.0):3):3):1,(46:0.0,47:0.0,48:0.0,49:0.0,50:0.0,44:0.0,45:0.0):1):1,(1:0.0,2:0.0):1):3,(90:0.0,91:0.0):4):1,(59:0.0,(60:1,63:0.0):2,61:0.0,62:0.0):3):12):10):7,((168:0.0,169:0.0,56:1,57:0.0,58:0.0,51:0.0,52:0.0,53:0.0,54:0.0,55:0.0):3,((88:0.0,89:0.0):13,(30:0.0,(19:1,25:0.0,27:0.0,29:0.0,21:0.0,23:0.0,24:0.0,26:0.0,20:0.0,22:0.0,17:0.0,18:0.0,28:0.0,31:0.0):3):2):1):5):11):17,174:20):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 276; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 276; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 276; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1606827926441; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3471677320009293231; tell It; setDefaultOrder 67 68 0 40 41 42 43 79 80 1 30 31 32 94 95 96 25 26 15 23 19 24 20 21 16 22 17 27 18 14 28 38 39 35 36 33 34 37 82 81 83 84 85 77 78 72 73 74 75 76 7 8 9 10 11 4 5 6 62 63 64 65 66 51 56 52 49 57 53 54 55 50 58 59 44 45 69 70 71 87 92 86 88 89 93 90 91 12 13 60 61 97 98 99 100 103 104 105 106 102 107 108 101 111 112 113 109 110 123 124 125 121 118 122 119 120 115 114 116 117 130 146 147 155 156 148 149 131 150 157 151 126 132 158 152 133 139 153 134 142 159 160 127 135 128 137 154 161 143 144 162 163 164 140 141 145 165 136 166 129 167 168 138 171 172 169 170 2 3 46 47 48 29 173; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1307039631162047746; mqVersion 361; checksumv 0 3 3053525615 null getNumChars 276 numChars 276 getNumTaxa 174 numTaxa 174 short true bits 15 states 15 sumSquaresStatesOnly 822317.0 sumSquares 822317.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 259; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1578 1353; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1307039631162047746 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 599; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1319 1281; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;