#NEXUS [written Wed Dec 02 13:29:07 CET 2020 by Mesquite version 3.61 (build 927) at 2017-15-inch-MacBook-Pro.local/192.168.2.86] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=65; TAXLABELS Cophinforma_eucalypti_CBS_117451 Neoscytalidium_dimidiatum_10_B05 Neoscytalidium_dimidiatum_10_B08 Neoscytalidium_dimidiatum_10_B10 Neoscytalidium_dimidiatum_10_H59 Neoscytalidium_dimidiatum_10_J79 Neoscytalidium_dimidiatum_10_J81 Neoscytalidium_dimidiatum_10_J83 Neoscytalidium_dimidiatum_10_J86 Neoscytalidium_dimidiatum_278 Neoscytalidium_dimidiatum_282 Neoscytalidium_dimidiatum_2_D53 Neoscytalidium_dimidiatum_2_D54 Neoscytalidium_dimidiatum_2_D56 Neoscytalidium_dimidiatum_2D57 Neoscytalidium_dimidiatum_2_D60 Neoscytalidium_dimidiatum_2_D61 Neoscytalidium_dimidiatum_2_D76 Neoscytalidium_dimidiatum_2_D77 Neoscytalidium_dimidiatum_2_D79 Neoscytalidium_dimidiatum_3_F67 Neoscytalidium_dimidiatum_3_F68 Neoscytalidium_dimidiatum_3_F69 Neoscytalidium_dimidiatum_3_F70 Neoscytalidium_dimidiatum_3_F71 Neoscytalidium_dimidiatum_5_B45 Neoscytalidium_dimidiatum_7E61 Neoscytalidium_dimidiatum_7E62 Neoscytalidium_dimidiatum_7E63 Neoscytalidium_dimidiatum_7_H09 Neoscytalidium_dimidiatum_9_F36 Neoscytalidium_dimidiatum_CBS_125608 Neoscytalidium_dimidiatum_CBS_125609 Neoscytalidium_dimidiatum_CBS_125610 Neoscytalidium_dimidiatum_CBS_125611 Neoscytalidium_dimidiatum_CBS_125617 Neoscytalidium_dimidiatum_CBS_125619 Neoscytalidium_dimidiatum_CBS_125622 Neoscytalidium_dimidiatum_CBS_125623 Neoscytalidium_dimidiatum_CBS_125695 Neoscytalidium_dimidiatum_CBS_125808 Neoscytalidium_dimidiatum_CBS_137.77 Neoscytalidium_dimidiatum_CBS_145.78 Neoscytalidium_dimidiatum_CBS_251.49 Neoscytalidium_dimidiatum_CBS_312.90 Neoscytalidium_dimidiatum_CBS_499.66 Neoscytalidium_dimidiatum_CBS_601.85 Neoscytalidium_dimidiatum_CBS_662.77 Neoscytalidium_dimidiatum_CMM_3566 Neoscytalidium_dimidiatum_CMM_3607 Neoscytalidium_dimidiatum_CMM_3616 Neoscytalidium_dimidiatum_CMM_3649 Neoscytalidium_dimidiatum_COUFAL0144 Neoscytalidium_dimidiatum_COUFAL0145 Neoscytalidium_dimidiatum_COUFAL0146 Neoscytalidium_dimidiatum_DE1606 Neoscytalidium_dimidiatum_PD103 Neoscytalidium_dimidiatum_PD104 Neoscytalidium_dimidiatum_PD105 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122070 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122071 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122072 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122610 Neoscytalidium_sp._1_Arp2_D Neoscytalidium_sp._1_Kale4_C ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=187; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Cophinforma_eucalypti_CBS_117451 CCGTGCCCGAATTTGCCTTATCACTC-GATGAGGGGCATTTTCGTGGTGGGGTTGGCCCGCGCTAGGCCGCGTTTGGTTCTCGGCAAAATGTCCGCTTGTGGATTTTTTGCGACCGGCGTGCGACCGAAACGCGCGCCC-----TCCGCTCCAGCCACTCACGTCCGTCCGTGCGACCAGCTGCTAA Neoscytalidium_dimidiatum_10_B05 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_B08 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_B10 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_H59 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_J79 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_J81 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_J83 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_10_J86 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_278 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_282 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D53 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D54 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D56 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2D57 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_2_D60 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_2_D61 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D76 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D77 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_2_D79 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgtgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_3_F67 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_3_F68 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_3_F69 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_3_F70 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_3_F71 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_5_B45 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_7E61 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcctcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgttcgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_7E62 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcctcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgttcgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_7E63 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcctcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgttcgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_7_H09 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_9_F36 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_CBS_125608 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125609 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125610 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125611 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125617 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125619 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125622 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125623 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_125695 catgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcctcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgttcgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_CBS_125808 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_137.77 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_145.78 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_251.49 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_312.90 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_499.66 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_601.85 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_CBS_662.77 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCTTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTCCGCCCGCGCAATCAGATGCTAA Neoscytalidium_dimidiatum_CMM_3566 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_CMM_3607 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_CMM_3616 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_CMM_3649 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_COUFAL0144 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_COUFAL0145 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_COUFAL0146 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_DE1606 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggatttcttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_PD103 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_PD104 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgtgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcaatcagatgctaa Neoscytalidium_dimidiatum_PD105 cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122070 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122071 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122072 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAA Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122610 CCTGCGCCGAATTTGCCTTATCGCTTGGGTGAGGGGCATTTTGGTGGTGGGGTTGGCCCGCGCTAGGCCTCGTTCGGTCCTCGGCAAAATCTCCGCATCAGGATTTTTTGCGACCGGCGTGCGACCGACACGCGCCTCCTAGCGTCGCTTGCAGCCACTCACGTTCGCCCGCGCGATCAGATGCTAA Neoscytalidium_sp._1_Arp2_D cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa Neoscytalidium_sp._1_Kale4_C cctgcgccgaatttgccttatcgcttgggtgaggggcattttggtggtggggttggcccgcgctaggcctcgttcggtcttcggcaaaatctccgcatcaggattttttgcgaccggcgtgcgaccgacacgcgcctcctagcgtcgcttgcagccactcacgtccgcccgcgcgatcagatgctaa ; END; BEGIN mrbayes; outgroup Cophinforma_eucalypti_CBS_117451; charset locus1 = 1 -187; partition AllLoci = 1 : locus1; log start filename = NeoscytalidiumTEFMB.log; END; BEGIN mrbayes; set partition = AllLoci; prset applyto = ( 1 ) statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); Lset applyto = ( 1 ) nst = 2 rates = propinv; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 1000000000 nchains = 4 printfreq = 10 temp = 0.2 samplefreq = 10 savebrlens = yes stoprule = yes stopval = 0.01 Relburnin = yes BurninFrac = 0.25 filename = NeoscytalidiumTEFMB; mcmc; sump; sumt; END; BEGIN TREES; Title 'Trees from "S7B_NeoscytalidiumTEFMB.nexus"'; ID 0176236616dd4; LINK Taxa = Taxa; TRANSLATE [0] 1 Cophinforma_eucalypti_CBS_117451, [1] 2 Neoscytalidium_dimidiatum_10_B05, [2] 3 Neoscytalidium_dimidiatum_10_B08, [3] 4 Neoscytalidium_dimidiatum_10_B10, [4] 5 Neoscytalidium_dimidiatum_10_H59, [5] 6 Neoscytalidium_dimidiatum_10_J79, [6] 7 Neoscytalidium_dimidiatum_10_J81, [7] 8 Neoscytalidium_dimidiatum_10_J83, [8] 9 Neoscytalidium_dimidiatum_10_J86, [9] 10 Neoscytalidium_dimidiatum_278, [10] 11 Neoscytalidium_dimidiatum_282, [11] 12 Neoscytalidium_dimidiatum_2_D53, [12] 13 Neoscytalidium_dimidiatum_2_D54, [13] 14 Neoscytalidium_dimidiatum_2_D56, [14] 15 Neoscytalidium_dimidiatum_2D57, [15] 16 Neoscytalidium_dimidiatum_2_D60, [16] 17 Neoscytalidium_dimidiatum_2_D61, [17] 18 Neoscytalidium_dimidiatum_2_D76, [18] 19 Neoscytalidium_dimidiatum_2_D77, [19] 20 Neoscytalidium_dimidiatum_2_D79, [20] 21 Neoscytalidium_dimidiatum_3_F67, [21] 22 Neoscytalidium_dimidiatum_3_F68, [22] 23 Neoscytalidium_dimidiatum_3_F69, [23] 24 Neoscytalidium_dimidiatum_3_F70, [24] 25 Neoscytalidium_dimidiatum_3_F71, [25] 26 Neoscytalidium_dimidiatum_5_B45, [26] 27 Neoscytalidium_dimidiatum_7E61, [27] 28 Neoscytalidium_dimidiatum_7E62, [28] 29 Neoscytalidium_dimidiatum_7E63, [29] 30 Neoscytalidium_dimidiatum_7_H09, [30] 31 Neoscytalidium_dimidiatum_9_F36, [31] 32 Neoscytalidium_dimidiatum_CBS_125608, [32] 33 Neoscytalidium_dimidiatum_CBS_125609, [33] 34 Neoscytalidium_dimidiatum_CBS_125610, [34] 35 Neoscytalidium_dimidiatum_CBS_125611, [35] 36 Neoscytalidium_dimidiatum_CBS_125617, [36] 37 Neoscytalidium_dimidiatum_CBS_125619, [37] 38 Neoscytalidium_dimidiatum_CBS_125622, [38] 39 Neoscytalidium_dimidiatum_CBS_125623, [39] 40 Neoscytalidium_dimidiatum_CBS_125695, [40] 41 Neoscytalidium_dimidiatum_CBS_125808, [41] 42 Neoscytalidium_dimidiatum_CBS_137.77, [42] 43 Neoscytalidium_dimidiatum_CBS_145.78, [43] 44 Neoscytalidium_dimidiatum_CBS_251.49, [44] 45 Neoscytalidium_dimidiatum_CBS_312.90, [45] 46 Neoscytalidium_dimidiatum_CBS_499.66, [46] 47 Neoscytalidium_dimidiatum_CBS_601.85, [47] 48 Neoscytalidium_dimidiatum_CBS_662.77, [48] 49 Neoscytalidium_dimidiatum_CMM_3566, [49] 50 Neoscytalidium_dimidiatum_CMM_3607, [50] 51 Neoscytalidium_dimidiatum_CMM_3616, [51] 52 Neoscytalidium_dimidiatum_CMM_3649, [52] 53 Neoscytalidium_dimidiatum_COUFAL0144, [53] 54 Neoscytalidium_dimidiatum_COUFAL0145, [54] 55 Neoscytalidium_dimidiatum_COUFAL0146, [55] 56 Neoscytalidium_dimidiatum_DE1606, [56] 57 Neoscytalidium_dimidiatum_PD103, [57] 58 Neoscytalidium_dimidiatum_PD104, [58] 59 Neoscytalidium_dimidiatum_PD105, [59] 60 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122070, [60] 61 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122071, [61] 62 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122072, [62] 63 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122610, [63] 64 Neoscytalidium_sp._1_Arp2_D, [64] 65 Neoscytalidium_sp._1_Kale4_C; TREE Fig._S7B._Bayesian_phylogeny_of_the_Neoscytalidium_tef1_alignment. = (1:0.03106742,39:0.0007324516,43:0.0007353676,44:0.000758577,38:0.0007121802,41:0.0007900887,47:0.0008080878,42:0.0007465277,45:0.0007695144,35:0.0007248164,36:0.0008393648,37:0.0007881804,55:0.0008185263,53:0.0007925088,59:0.0007053688,57:0.0008458661,65:0.0008103814,64:0.0007909085,25:0.0007503834,24:0.0007940401,23:0.0008476346,15:0.0006772515,10:0.0008119003,16:0.0008382051,56:0.001898252,(32:0.0007715459,34:0.0007123444,46:0.0008458388,48:0.000753947,54:0.000848227,52:0.0007015598,51:0.0007455311,50:0.0007171524,49:0.0007874494,(58:0.0007849633,20:0.0008210547):0.002039722,31:0.0007911391,30:0.0008180781,26:0.0006878544,22:0.000747035,21:0.000825939,11:0.0007414839,19:0.0008258941,18:0.0007703393,17:0.0007045294,14:0.0007191594,13:0.0007708252,12:0.0008804286,9:0.00070993,8:0.000808849,7:0.0007790907,6:0.0008297712,5:0.0008058534,4:0.0006839411,3:0.0007666962,2:0.0007621881,33:0.000752843):0.001844501,(60:0.0008088907,61:0.0007846902,62:0.0007475388,63:0.0007836988,40:0.00183492,29:0.0007382196,28:0.0008068197,27:0.000780032):0.002753515); END; BEGIN TREES; Title 'Trees from "S7B_NeoscytalidiumTEFMB.nexus"'; ID 0176236616e75; LINK Taxa = Taxa; TRANSLATE [0] 1 Cophinforma_eucalypti_CBS_117451, [1] 2 Neoscytalidium_dimidiatum_10_B05, [2] 3 Neoscytalidium_dimidiatum_10_B08, [3] 4 Neoscytalidium_dimidiatum_10_B10, [4] 5 Neoscytalidium_dimidiatum_10_H59, [5] 6 Neoscytalidium_dimidiatum_10_J79, [6] 7 Neoscytalidium_dimidiatum_10_J81, [7] 8 Neoscytalidium_dimidiatum_10_J83, [8] 9 Neoscytalidium_dimidiatum_10_J86, [9] 10 Neoscytalidium_dimidiatum_278, [10] 11 Neoscytalidium_dimidiatum_282, [11] 12 Neoscytalidium_dimidiatum_2_D53, [12] 13 Neoscytalidium_dimidiatum_2_D54, [13] 14 Neoscytalidium_dimidiatum_2_D56, [14] 15 Neoscytalidium_dimidiatum_2D57, [15] 16 Neoscytalidium_dimidiatum_2_D60, [16] 17 Neoscytalidium_dimidiatum_2_D61, [17] 18 Neoscytalidium_dimidiatum_2_D76, [18] 19 Neoscytalidium_dimidiatum_2_D77, [19] 20 Neoscytalidium_dimidiatum_2_D79, [20] 21 Neoscytalidium_dimidiatum_3_F67, [21] 22 Neoscytalidium_dimidiatum_3_F68, [22] 23 Neoscytalidium_dimidiatum_3_F69, [23] 24 Neoscytalidium_dimidiatum_3_F70, [24] 25 Neoscytalidium_dimidiatum_3_F71, [25] 26 Neoscytalidium_dimidiatum_5_B45, [26] 27 Neoscytalidium_dimidiatum_7E61, [27] 28 Neoscytalidium_dimidiatum_7E62, [28] 29 Neoscytalidium_dimidiatum_7E63, [29] 30 Neoscytalidium_dimidiatum_7_H09, [30] 31 Neoscytalidium_dimidiatum_9_F36, [31] 32 Neoscytalidium_dimidiatum_CBS_125608, [32] 33 Neoscytalidium_dimidiatum_CBS_125609, [33] 34 Neoscytalidium_dimidiatum_CBS_125610, [34] 35 Neoscytalidium_dimidiatum_CBS_125611, [35] 36 Neoscytalidium_dimidiatum_CBS_125617, [36] 37 Neoscytalidium_dimidiatum_CBS_125619, [37] 38 Neoscytalidium_dimidiatum_CBS_125622, [38] 39 Neoscytalidium_dimidiatum_CBS_125623, [39] 40 Neoscytalidium_dimidiatum_CBS_125695, [40] 41 Neoscytalidium_dimidiatum_CBS_125808, [41] 42 Neoscytalidium_dimidiatum_CBS_137.77, [42] 43 Neoscytalidium_dimidiatum_CBS_145.78, [43] 44 Neoscytalidium_dimidiatum_CBS_251.49, [44] 45 Neoscytalidium_dimidiatum_CBS_312.90, [45] 46 Neoscytalidium_dimidiatum_CBS_499.66, [46] 47 Neoscytalidium_dimidiatum_CBS_601.85, [47] 48 Neoscytalidium_dimidiatum_CBS_662.77, [48] 49 Neoscytalidium_dimidiatum_CMM_3566, [49] 50 Neoscytalidium_dimidiatum_CMM_3607, [50] 51 Neoscytalidium_dimidiatum_CMM_3616, [51] 52 Neoscytalidium_dimidiatum_CMM_3649, [52] 53 Neoscytalidium_dimidiatum_COUFAL0144, [53] 54 Neoscytalidium_dimidiatum_COUFAL0145, [54] 55 Neoscytalidium_dimidiatum_COUFAL0146, [55] 56 Neoscytalidium_dimidiatum_DE1606, [56] 57 Neoscytalidium_dimidiatum_PD103, [57] 58 Neoscytalidium_dimidiatum_PD104, [58] 59 Neoscytalidium_dimidiatum_PD105, [59] 60 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122070, [60] 61 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122071, [61] 62 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122072, [62] 63 Neoscytalidium_dimidiatum_was_novaehollandiae_CBS_122610, [63] 64 Neoscytalidium_sp._1_Arp2_D, [64] 65 Neoscytalidium_sp._1_Kale4_C; TREE 'Fig. S7B (bootstrap support values overlayed). Single most parsimonious tree of the Neoscytalidium tef1 alignment.' = (((39:0.0,43:0.0,44:0.0,38:0.0,41:0.0,47:0.0,42:0.0,45:0.0,35:0.0,36:0.0,37:0.0,(32:0.0,34:0.0,46:0.0,48:0.0,54:0.0,52:0.0,51:0.0,50:0.0,49:0.0,(58:0.0,20:0.0):1,31:0.0,30:0.0,26:0.0,22:0.0,21:0.0,11:0.0,19:0.0,18:0.0,17:0.0,14:0.0,13:0.0,12:0.0,9:0.0,8:0.0,7:0.0,6:0.0,5:0.0,4:0.0,3:0.0,2:0.0,33:0.0):1,55:0.0,53:0.0,59:0.0,57:0.0,65:0.0,64:0.0,25:0.0,24:0.0,23:0.0,15:0.0,10:0.0,16:0.0,56:1):1,(60:0.0,61:0.0,62:0.0,63:0.0,40:1,29:0.0,28:0.0,27:0.0):1):13,1:19):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 187; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 187; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 187; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1606912147953; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8903293579191719887; tell It; setDefaultOrder 64 61 60 59 58 57 56 55 54 45 44 53 52 51 43 50 49 48 47 46 42 41 40 39 38 37 35 34 33 36 32 15 63 16 12 13 14 3 0 30 4 6 1 2 7 17 5 18 25 24 23 22 21 20 19 62 28 27 26 8 9 10 11 31 29; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 465507337289341713; mqVersion 361; checksumv 0 3 1697327008 null getNumChars 187 numChars 187 getNumTaxa 65 numTaxa 65 short true bits 1152921504606846991 states 15 sumSquaresStatesOnly 262970.0 sumSquares -8.218024484837605E21 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 259; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 943 1351; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #465507337289341713 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 341; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 684 1279; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;