#NEXUS [written Wed Dec 02 14:04:04 CET 2020 by Mesquite version 3.61 (build 927) at 2017-15-inch-MacBook-Pro.local/192.168.2.86] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=30; TAXLABELS Dothiorella_sarmentorum_CBS_124720 Pseudofusicoccum_adansoniae_CBS_122053 Pseudofusicoccum_adansoniae_CBS_122054 Pseudofusicoccum_adansoniae_CBS_122055 Pseudofusicoccum_adansoniae_CBS_122056 Pseudofusicoccum_adansoniae_CBS_122057 Pseudofusicoccum_africanum_CMW_48027 Pseudofusicoccum_africanum_CMW_48028 Pseudofusicoccum_africanum_CMW_48030 Pseudofusicoccum_ardesiacum_CBS_122062 Pseudofusicoccum_ardesiacum_CBS_122063 Pseudofusicoccum_ardesiacum_CBS_122064 Pseudofusicoccum_artocarpi_CBS_138655 Pseudofusicoccum_calophylli_MFLUCC_17_2533 Pseudofusicoccum_kimberleyense_CBS_122058 Pseudofusicoccum_kimberleyense_CBS_122059 Pseudofusicoccum_kimberleyense_CBS_122060 Pseudofusicoccum_kimberleyense_CBS_122061 Pseudofusicoccum_kimberleyense_CPC_29627 Pseudofusicoccum_olivaceum_CBS_124939 Pseudofusicoccum_olivaceum_CBS_124940 Pseudofusicoccum_olivaceum_CPC_34655 Pseudofusicoccum_stromaticum_CBS_117448 Pseudofusicoccum_stromaticum_CBS_117449 Pseudofusicoccum_stromaticum_CBS_138362 Pseudofusicoccum_violaceum_CBS_115453 Pseudofusicoccum_violaceum_CBS_115594 Pseudofusicoccum_violaceum_CBS_124936 Pseudofusicoccum_violaceum_CBS_124937 Pseudofusicoccum_violaceum_CBS_124938 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=295; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Dothiorella_sarmentorum_CBS_124720 ???????????????????????????????GGTAAGAAACTTTTTTGCTCCTTCACACCCACCTGAGATTTGCCTGTCGCTCGGTGAGGGGCATTTTCGTGGTGGGGTTGGCCCGCGCTAAACCTCGTTTGCGCTTCGGCAAAATCTCCACATTTGATTTTTTTGCGCCCGGTGTCACCCCGA------------TGCGCGCGTCCCTCACC-AAAAACTCTGAGC---------CACTCAGCGATCAGCTGCTAATGCCTGCTGCAGGAAGCCGCCGAGCTCGGCAAGGGTTC Pseudofusicoccum_adansoniae_CBS_122053 GAGCCAGAC----TTTTTGCCCGACGCCACCCGTGTGCATCGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_adansoniae_CBS_122054 GAGCCAGAC----TTTTTGCCCGACGCCACCCGTGTGCATCGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_adansoniae_CBS_122055 GAGCCAGAC----TTTTTGCCCGACGCCACCCGTGTGCATCGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_adansoniae_CBS_122056 GAGCCAGAC----TTTTTGCCCGACGCCACCCGTGTGCATCGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_adansoniae_CBS_122057 GAGCCAGAC----TTTTTGCCCGACGCCACCCGTGTGCATCGGTCTCGCTGCACGCAATTTTGGCCGCGTTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCCAAAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_africanum_CMW_48027 GAGCCAGACTTTTTTTTTGCCTGACGCCACCCGTGTGCAGCGATCTGGCTGCACGCAATTTTGGCCGGATCTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGG-TTTTTTGCGACCGGCGTCAA-CCGAACGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCATCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_africanum_CMW_48028 GAGCCAGACTTTTTTTTTGCCTGACGCCACCCGTGTGCAGCGATCTGGCTGCACGCAATTTTGGCCGGATCTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGG-TTTTTTGCGACCGGCGTCAA-CCGAACGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCATCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_africanum_CMW_48030 GAGCCAGACTTTTTTTTTGCCTGACGCCACCCGTGTGCAGCGATCTGGCTGCACGCAATTTTGGCCGGATCTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGG-TTTTTTGCGACCGGCGTCAA-CCGAACGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCATCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_ardesiacum_CBS_122062 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCAACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_ardesiacum_CBS_122063 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCAACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_ardesiacum_CBS_122064 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCAACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_artocarpi_CBS_138655 GAGCCAGACTTTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGG-TTTTTTGCGACCGACGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTC Pseudofusicoccum_calophylli_MFLUCC_17_2533 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_kimberleyense_CBS_122058 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGCGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_kimberleyense_CBS_122059 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGCGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_kimberleyense_CBS_122060 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_kimberleyense_CBS_122061 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_kimberleyense_CPC_29627 GAGCCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTCGCTGCATGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGCTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_olivaceum_CBS_124939 GAGCCAGACTTTTTTTTTGGCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCGGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_olivaceum_CBS_124940 GAGCCAGACTTTTTTTTTGGCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCGGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_olivaceum_CPC_34655 GAGCCAGACTTTTTTTTTTGCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCGGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_stromaticum_CBS_117448 GAGCCAGAC---TTTTTTTGCCGACACCACCCATGTGCAGCGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_stromaticum_CBS_117449 GAGCCAGAC---TTTTTTTGCCGACACCACCCATGTGCAGCGATCTCGCTGCACGCAATCCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTTGGTCGGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCACCACAGGAAGCCGCTGAGCTCGGTAAGGGTTC Pseudofusicoccum_stromaticum_CBS_138362 GAGCCAAAC-----TTTTTGCCGACGCCACCCATGTGCAGCGATCTCGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCAGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGA???????????????????????? Pseudofusicoccum_violaceum_CBS_115453 GAACCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTTGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_violaceum_CBS_115594 GAACCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTTGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_violaceum_CBS_124936 GAACCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTTGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_violaceum_CBS_124937 GAACCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTTGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC Pseudofusicoccum_violaceum_CBS_124938 GAACCAGAC-TTTTTTTTGCCCGACGCCACCCATGTGCAGCGATCTTGCTGCACGCAATTCTGGCCGGATTTGCCTATCACTCGATGAGGGGCATTTTCGTGGTGGGGTCGGTCTGCGCTAGGCCGCGTCGGTCGTTCGGCAAAATGCCCGCTTTGGGTTTTTTTGCGACCGGCGTCCGCCCGAGCGTGCATGGTGCACGACCGCCCCTCGCC-AAAAATTTCCTGCGTCATCTGATTCCGCGCGACACGATGCTAACGCCCGCCACAGGAAGCCGCTGAGCTCGGCAAGGGTTC ; END; BEGIN mrbayes; outgroup Dothiorella_sarmentorum_CBS_124720; charset locus1 = 1 -295; partition AllLoci = 1 : locus1; log start filename = PseudofusicoccumTEFMB.log; END; BEGIN mrbayes; set partition = AllLoci; prset applyto = ( 1 ) statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); Lset applyto = ( 1 ) nst = 2 rates = propinv; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 1000000000 nchains = 4 printfreq = 10 temp = 0.2 samplefreq = 10 savebrlens = yes stoprule = yes stopval = 0.01 Relburnin = yes BurninFrac = 0.25 filename = PseudofusicoccumTEFMB; mcmc; sump; sumt; END; BEGIN TREES; Title 'Trees from "S9B_PseudofusicoccumTEFMB.nexus"'; ID 01761deccd8271; LINK Taxa = Taxa; TRANSLATE [0] 1 Dothiorella_sarmentorum_CBS_124720, [1] 2 Pseudofusicoccum_adansoniae_CBS_122053, [2] 3 Pseudofusicoccum_adansoniae_CBS_122054, [3] 4 Pseudofusicoccum_adansoniae_CBS_122055, [4] 5 Pseudofusicoccum_adansoniae_CBS_122056, [5] 6 Pseudofusicoccum_adansoniae_CBS_122057, [6] 7 Pseudofusicoccum_africanum_CMW_48027, [7] 8 Pseudofusicoccum_africanum_CMW_48028, [8] 9 Pseudofusicoccum_africanum_CMW_48030, [9] 10 Pseudofusicoccum_ardesiacum_CBS_122062, [10] 11 Pseudofusicoccum_ardesiacum_CBS_122063, [11] 12 Pseudofusicoccum_ardesiacum_CBS_122064, [12] 13 Pseudofusicoccum_artocarpi_CBS_138655, [13] 14 Pseudofusicoccum_calophylli_MFLUCC_17_2533, [14] 15 Pseudofusicoccum_kimberleyense_CBS_122058, [15] 16 Pseudofusicoccum_kimberleyense_CBS_122059, [16] 17 Pseudofusicoccum_kimberleyense_CBS_122060, [17] 18 Pseudofusicoccum_kimberleyense_CBS_122061, [18] 19 Pseudofusicoccum_kimberleyense_CPC_29627, [19] 20 Pseudofusicoccum_olivaceum_CBS_124939, [20] 21 Pseudofusicoccum_olivaceum_CBS_124940, [21] 22 Pseudofusicoccum_olivaceum_CPC_34655, [22] 23 Pseudofusicoccum_stromaticum_CBS_117448, [23] 24 Pseudofusicoccum_stromaticum_CBS_117449, [24] 25 Pseudofusicoccum_stromaticum_CBS_138362, [25] 26 Pseudofusicoccum_violaceum_CBS_115453, [26] 27 Pseudofusicoccum_violaceum_CBS_115594, [27] 28 Pseudofusicoccum_violaceum_CBS_124936, [28] 29 Pseudofusicoccum_violaceum_CBS_124937, [29] 30 Pseudofusicoccum_violaceum_CBS_124938; TREE Fig._S9B._Bayesian_phylogeny_of_the_Pseudofusicoccum_tef1_alignment. = (1:0.2469145,(((7:0.00169941,8:0.001739063,9:0.001829281):0.0205353,(6:0.001620888,2:0.001964844,3:0.001777334,4:0.00165775,5:0.001645059):0.01232627):0.007502835,14:0.002752798,13:0.008378448,(10:0.001622842,11:0.001669489,12:0.001674678):0.005524767,(26:0.001599283,27:0.001595027,28:0.001681958,29:0.001688024,30:0.001736757):0.007117982,19:0.003072157,((15:0.001794475,16:0.001870102):0.00425784,17:0.001738668,18:0.001647024):0.005918632):0.007664662,(25:0.005999059,(23:0.001613384,24:0.001782725):0.01299107,22:0.001774075,20:0.001894536,21:0.00177384):0.007464179); END; BEGIN TREES; Title 'Trees from "S9B_PseudofusicoccumTEFMB.nexus"'; ID 01761deccd8572; LINK Taxa = Taxa; TRANSLATE [0] 1 Dothiorella_sarmentorum_CBS_124720, [1] 2 Pseudofusicoccum_adansoniae_CBS_122053, [2] 3 Pseudofusicoccum_adansoniae_CBS_122054, [3] 4 Pseudofusicoccum_adansoniae_CBS_122055, [4] 5 Pseudofusicoccum_adansoniae_CBS_122056, [5] 6 Pseudofusicoccum_adansoniae_CBS_122057, [6] 7 Pseudofusicoccum_africanum_CMW_48027, [7] 8 Pseudofusicoccum_africanum_CMW_48028, [8] 9 Pseudofusicoccum_africanum_CMW_48030, [9] 10 Pseudofusicoccum_ardesiacum_CBS_122062, [10] 11 Pseudofusicoccum_ardesiacum_CBS_122063, [11] 12 Pseudofusicoccum_ardesiacum_CBS_122064, [12] 13 Pseudofusicoccum_artocarpi_CBS_138655, [13] 14 Pseudofusicoccum_calophylli_MFLUCC_17_2533, [14] 15 Pseudofusicoccum_kimberleyense_CBS_122058, [15] 16 Pseudofusicoccum_kimberleyense_CBS_122059, [16] 17 Pseudofusicoccum_kimberleyense_CBS_122060, [17] 18 Pseudofusicoccum_kimberleyense_CBS_122061, [18] 19 Pseudofusicoccum_kimberleyense_CPC_29627, [19] 20 Pseudofusicoccum_olivaceum_CBS_124939, [20] 21 Pseudofusicoccum_olivaceum_CBS_124940, [21] 22 Pseudofusicoccum_olivaceum_CPC_34655, [22] 23 Pseudofusicoccum_stromaticum_CBS_117448, [23] 24 Pseudofusicoccum_stromaticum_CBS_117449, [24] 25 Pseudofusicoccum_stromaticum_CBS_138362, [25] 26 Pseudofusicoccum_violaceum_CBS_115453, [26] 27 Pseudofusicoccum_violaceum_CBS_115594, [27] 28 Pseudofusicoccum_violaceum_CBS_124936, [28] 29 Pseudofusicoccum_violaceum_CBS_124937, [29] 30 Pseudofusicoccum_violaceum_CBS_124938; TREE 'Fig. S9B (bootstrap support values overlayed). First of 72 equally most parsimonious trees of the Pseudofusicoccum tef1 alignment.' = (((25:2,(((22:1,20:0.0,21:0.0):3,(((((7:0.0,8:0.0,9:0.0):11,13:3):2,(10:0.0,11:0.0,12:0.0):1):1,((14:1,((15:0.0,16:0.0):1,17:0.0,18:0.0):1):1,19:0.0):1):1,(26:0.0,27:0.0,28:0.0,29:0.0,30:0.0):2):1):3,(6:0.0,2:0.0,3:0.0,4:0.0,5:0.0):8):2):5,(23:0.0,24:0.0):2):33,1:58):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 295; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 295; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 295; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1606914244049; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2612574016055112023; tell It; setDefaultOrder 29 10 11 12 13 9 6 7 8 16 17 18 15 14 25 26 27 28 24 4 5 3 1 2 0 19 20 21 22 23; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4713947335315887334; mqVersion 361; checksumv 0 3 1565233151 null getNumChars 295 numChars 295 getNumTaxa 30 numTaxa 30 short true bits 15 states 15 sumSquaresStatesOnly 182829.0 sumSquares 182829.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 259; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1788 1121; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4713947335315887334 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 522; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1529 1049; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;