#NEXUS [written Tue Dec 01 15:09:29 CET 2020 by Mesquite version 3.61 (build 927) at 2017-15-inch-MacBook-Pro.local/192.168.2.86] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=121; TAXLABELS Dothiorella_acacicola_CBS_141295 Dothiorella_acericola_HNXX032 Dothiorella_acericola_KUMCC_18_0137 Dothiorella_alpina_CGMCC_3.18001 Dothiorella_brevicollis_CBS_130411 Dothiorella_brevicollis_CBS_130412 Dothiorella_californica_CBS_119635 Dothiorella_californica_CBS_141587 Dothiorella_capri_amissi_CBS_121763 Dothiorella_capri_amissi_CBS_121878 Dothiorella_casuarinae_CBS_120688 Dothiorella_casuarinae_CBS_120689 Dothiorella_casuarinae_CBS_120690 Dothiorella_citricola_CBS_124728 Dothiorella_citricola_CBS_124729 Dothiorella_citricola_CBS_130415 Dothiorella_diospyricola_CBS_145972 Dothiorella_dulcispinae_CBS_121764 Dothiorella_dulcispinae_CBS_130413 Dothiorella_dulcispinae_was_oblonga_CBS_121765 Dothiorella_dulcispinae_was_oblonga_CBS_121766 Dothiorella_dulcispinae_was_oblonga_CBS_130414 Dothiorella_guttulata_CBS_134886 Dothiorella_guttulata_CBS_134888 Dothiorella_iberica_CBS_113189 Dothiorella_iberica_CBS_115035 Dothiorella_iberica_CBS_115036 Dothiorella_iberica_CBS_115037 Dothiorella_iberica_CBS_115039 Dothiorella_iberica_CBS_115040 Dothiorella_iberica_CBS_115041 Dothiorella_iberica_CBS_121001 Dothiorella_iberica_CBS_130984 Dothiorella_iberica_CBS_133500 Dothiorella_iberica_PD257 Dothiorella_iberica_UCD1448SLO Dothiorella_iberica_UCR_DI3 Dothiorella_iberica_UCROK1227 Dothiorella_iberica_UCROK1396 Dothiorella_iranica_CBS_124722 Dothiorella_italica_CBS_115038 Dothiorella_italica_CBS_122805 Dothiorella_italica_CBS_122806 Dothiorella_italica_CBS_910.73 Dothiorella_italica_CPC_30616 Dothiorella_italica_CPC_33887 Dothiorella_italica_CPC_35506 Dothiorella_italica_CPC_35540 Dothiorella_italica_MFLUCC_17_0951 Dothiorella_lampangensis_MFLUCC_18_0232 Dothiorella_longicollis_CBS_122066 Dothiorella_longicollis_CBS_122067 Dothiorella_longicollis_CBS_122068 Dothiorella_magnoliae_CFCC_51563 Dothiorella_magnoliae_CFCC_51564 Dothiorella_mangifericola_CBS_124726 Dothiorella_mangifericola_CBS_124727 Dothiorella_mangifericola_was_rosulata_CBS_121760 Dothiorella_mangifericola_was_rosulata_CBS_121761 Dothiorella_moneti_MUCC505 Dothiorella_omnivora_CBS_124716 Dothiorella_omnivora_CBS_140349 Dothiorella_omnivora_CBS_188.87 Dothiorella_parva_CBS_124720 Dothiorella_parva_CBS_124721 Dothiorella_parva_CBS_134885 Dothiorella_parva_CBS_134887 Dothiorella_plurivora_CBS_124724 Dothiorella_pretoriensis_CBS_130404 Dothiorella_prunicola_CBS_124723 Dothiorella_eriobotryae_was_rhamni_CBS_145976 Dothiorella_eriobotryae_CBS_140852 Dothiorella_santali_MUCC509 Dothiorella_sarmentorum_CBS_164.33 Dothiorella_sarmentorum_CPC_31043 Dothiorella_sarmentorum_IMI_63581b Dothiorella_sarmentorum_was_americana_CBS_128309 Dothiorella_sarmentorum_was_americana_CBS_128310 Dothiorella_sempervirentis_CBS_124718 Dothiorella_sempervirentis_CBS_124719 Dothiorella_sp._1_CBS_121783 Dothiorella_sp._1_CBS_121784 Dothiorella_sp._1_CBS_121785 Dothiorella_striata_CBS_124730 Dothiorella_striata_CBS_124731 Dothiorella_striata_was_neclivorem_DAR_80992 Dothiorella_symphoricarpicola_CBS_135622 Dothiorella_symphoricarpicola_CBS_135623 Dothiorella_symphoricarpicola_CBS_135847 Dothiorella_symphoricarpicola_CPC_30972 Dothiorella_symphoricarpicola_CPC_30976 Dothiorella_symphoricarpicola_CPC_31033 Dothiorella_symphoricarpicola_CPC_33923 Dothiorella_symphoricarpicola_MFLUCC_13_0497 Dothiorella_tectonae_MFLUCC_18_0382 Dothiorella_thailandica_CBS_133991 Dothiorella_thripsita_CBS_125445 Dothiorella_ulmacea_CBS_138855 Dothiorella_ulmacea_CBS_140005 Dothiorella_ulmacea_CBS_141414 Dothiorella_uruguayensis_CBS_124908 Dothiorella_vidmadera_CPC_30614 Dothiorella_vidmadera_DAR_78992 Dothiorella_vinea_gemmae_CPC_29689 Dothiorella_vinea_gemmae_DAR_81012 Dothiorella_viticola_CBS_112869 Dothiorella_viticola_CBS_117006 Dothiorella_viticola_CBS_117007 Dothiorella_viticola_CBS_117008 Dothiorella_viticola_CBS_117009 Dothiorella_viticola_CBS_120999 Dothiorella_viticola_CMW_37930 Dothiorella_viticola_CMW_37931 Dothiorella_viticola_CMW_37933 Dothiorella_viticola_CPC_33136 Dothiorella_viticola_CPC_33257 Dothiorella_viticola_was_westralis_DAR_80529 Dothiorella_viticola_was_westralis_WA10NO03 Dothiorella_yunnana_CGMCC_3.17999 Dothiorella_yunnana_CGMCC_3.18000 Neofusicoccum_luteum_CBS_121482 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=269; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Dothiorella_acacicola_CBS_141295 ????????????????????????????????????????????????TCTCAAGCCTGCCTTATCACTT----TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAACTTCGTTTGTGC-TTCGGCAAAATACCCACTTTTGGTTTTTT---------TGCGACCGGTGGCACAC---------CGAAGCGC-GCGCCCCC--TCGTCAAAAAAAAAAAAAAAAGTGAGCCACTCA-GCGATCAGC---TGCTAATA Dothiorella_acericola_HNXX032 ?AAAA---TTTTCTGCT-CTGCACTG---GTGCTGGGTCGCTGCG-CACCTCACATCTGCCTCAACGCTT----TGGTGAGGGGTAATTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCTC---TCACC----------AACACTTTGCGCCACAT--GCCAACAGT---TGCTAATG Dothiorella_acericola_KUMCC_18_0137 ?????????????????????????????????????????????-????TCACATCTGCCTCAACGCTT----TGGTGAGGGGTAATTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCTC---TCACC----------AACACTTTGCGCCACAT--GCCAACAGT---TGCTAATG Dothiorella_alpina_CGMCC_3.18001 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACATCTGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA--------------TTTTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCTC---TCACC----------AACACATTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_brevicollis_CBS_130411 AACTT---TTTCCTGCTCCTGCACTG---GTGTTGCGTTGTCGCTCCGCCTCAGATGTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGAAGCGC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_brevicollis_CBS_130412 ?????????????????????????????????????????????CCGCCTCAGATGTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGAAGCGC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_californica_CBS_119635 AAC-----TTTTTCGCTCCTTCA-----------------CACACCCACCTGATATTTGCCCTGTCACCT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAGACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_californica_CBS_141587 AAC-----TTTATCGCTCCTT-------------------CACACCCACCTGACATCTGCCTTGTCGCCT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCCCTCA-GCGATCAGC---TGCTAATG Dothiorella_capri_amissi_CBS_121763 TGCTC---TTTTCCGCTCCTGCACTG--------------TCGCTTCACATCA-CTTTGCC-TCTCGCTC----TGGTGAGGGGCATTTTTTGATGGTGGGGTTGGCCCGCGCGCTAAACCTCATCCGCGC-TTCGGCAAAATACCCACATTTGGGTTTT----------TGCGACCGGTGCCACAC---------CGAAGCGC-GCGCCCCC--TCGT---------CAAAAATTTCGAGCCACTCA-GCGATCGCC---TGCTAATG Dothiorella_capri_amissi_CBS_121878 TGCTC---TTTTCCGCTCCTGCACTG--------------TCGCTTCACATCA-CTTTGCC-TCTCGCTC----TGGTGAGGGGCATTTTTTGATGGTGGGGTTGGCCCGCGCGCTAAACCTCATCCGCGC-TTCGGCAAAATACCCACATTTGGGTTTT----------TGCGACCGGTGCCACAC---------CGAAGCGC-GCGCCCCC--TCGT---------CAAAAATTTCGAGCCACTCA-GCGATCGTC---TGCTAATG Dothiorella_casuarinae_CBS_120688 ?????????????????????????????????????????????????????????TGCC-TATCGCTC----TGGTGAGGGGCATTTTT-CATGGTGGGGTTGGCCCGCGCGCTAAGCCCCGTTTGTGC-TTCGGCAAAA-ATCCACACTTGGATTTT----------TGCGACCGGTGGCACAC---------CGAAGCGC-GCGCGCCCCCTCGTCA-------CGAAAATTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_casuarinae_CBS_120689 ?????????????????????????????????????????????????????????TGCC-TATCGCTC----TGGTGAGGGGCATTTTT-CATGGTGGGGTTGGCCCGCGCGCTAAGCCCCGTTTGTGC-TTCGGACAAAAATTTACCCTTGGATTTT----------TGCGACCGGTGGCACAC---------CGAAGCGC-GCGCGCCCCCTCGTCA-------CGAAAATTTTGAGCCACTCA-GCAATCAGC---TGCTAATG Dothiorella_casuarinae_CBS_120690 ?????????????????????????????????????????????????????????TGCC-TATCGCTC----TGGTGAGGGGCATTTTT-CATGGTGGGGTTGGCCCGCGCGCTAAGCCCCGTTTGTGC-TTCGGCAAAA-ATCCACACTTGGATTTT----------TGCGACCGGTGGCACAC---------CGAAGCGC-GCGCGCCCCCTCGTCA-------CGAAAATTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_citricola_CBS_124728 CAAAT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCCCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAAT--GC-GCGCCCC---TCACC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_citricola_CBS_124729 CAAAT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCCCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAAT--GC-GCGCCCC---TCACC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_citricola_CBS_130415 ???????????????????????CCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCCCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAAT--GC-GCGCCCC---TCACC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_diospyricola_CBS_145972 AACTT---TTTCCTGCTCCTGCACTG---GTGTTGCGTTGTCGCTCCGCCTCGAATGTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGACGCGC-ATGCCCC---TCACCAAC-----AAAAAACCATGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_dulcispinae_CBS_121764 AACTC----TTCCCGCACTTGCACTGCTGGTGGCGTCGGGTTGCCTCACCTCAGATCTGCCTCGTCGCTTT-GTTGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCTGTTGGGGC-TTCGGCAAATTCTCCACATTTGATATTTTT----TGCCTGCGCTCGGTGTCAC-----------CGATGCGC-GCGCTC----TC-----------ACCAAAATCCGAGCCATTCA-ACGATCGGT---TGCTAATG Dothiorella_dulcispinae_CBS_130413 AACTC----TTCCCGCACTTGCACTGCTGGTGGCGTCGGGTTGCCTCACCTCAGATCTGCCTCGTCGCTTT-GTTGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCTGTTGGGGC-TTCGGCAAATTCTCCACATTTGATATTTTT-----TCCTGTGCTCGGTGTCAC-----------CGATGCGC-GCGCTC----TC-----------ACTAAAATCCGAGCCATTCA-ACGATCGGT---TGCTAATG Dothiorella_dulcispinae_was_oblonga_CBS_121765 ACCTC----TTCCCGCACTTGCACTGCTGGTGGCGTCGGGTTGCCTCACCTCAGATCTGCCTCGTCGCTTT-GTTGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCTGTTGGGGC-TTCGGCAAATTCTCCACATTTGATATTTTT----TGCCTGCGCTCGGTGTCAC-----------CGATGCGC-GCGCTC----TC-----------ACCAAAATCCGAGCCATTCA-ACGATCGGT---TGCTAATG Dothiorella_dulcispinae_was_oblonga_CBS_121766 ACCTC----TTCCCGCACTTGCACTGCTGGTGGCGTCGGGTTGCCTCACCTCAGATCTGCCTCGTCGCTTT-GTTGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCTGTTGGGGC-TTCGGCAAATTCTCCACATTTGATATTTTT----TGCCTGCGCTCGGTGTCAC-----------CGATGCGC-GCGCTC----TC-----------ACCAAAATCCGAGCCATTCA-ACGATCGGT---TGCTAATG Dothiorella_dulcispinae_was_oblonga_CBS_130414 ????????????????????????????????????????????????????????????????????????????GTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCTGTTGGGGC-TTCGGCAAATTCTCCACATTTGATATTTTTT---TGCCTGCGCTCGGTGTCAC-----------CGATGCGC-GCGCTC-----------------ACCAAAATCCGAGCCATTCA-ACGATCGGT---TGCTAATG Dothiorella_guttulata_CBS_134886 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------TTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_guttulata_CBS_134888 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------TTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_113189 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_115035 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTCACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-CATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATTAGC---TGCTAATG Dothiorella_iberica_CBS_115036 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_115037 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_115039 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_115040 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATTAGC---TGCTAATG Dothiorella_iberica_CBS_115041 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_121001 AAC-----TTTTTTGCTCCTT-------------------TCCACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_130984 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_CBS_133500 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_PD257 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_UCD1448SLO AAC-----TTTTTTGCTCCTT-------------------TCCACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_UCR_DI3 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_UCROK1227 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iberica_UCROK1396 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGACATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_iranica_CBS_124722 ACCTC--TTTCCCCGTCCTTGCACTG--GCGTCGTGGCTGCTGCA-CACCTGATGTTTGCCTTATCGCTT----TGGTGAGGGGCAATTTTTGATGGTGGGGTTGGCCCG-GCGCTAAACTGCGTTTGTGCTTTCGGCAAAATCTCCACATTTGATTTTTTT----GCTCTGCGCCCCGTGTCACAC---------CGATGCGC-GCGCCCC---TCGC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CBS_115038 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CBS_122805 ????????????????????????????????????????????CCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CBS_122806 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CBS_910.73 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAATCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CPC_30616 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCCCGATGCCCTCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CPC_33887 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCCCGATGCCCTCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CPC_35506 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_CPC_35540 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_italica_MFLUCC_17_0951 ?????????????????????????????????????????????????????AATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_lampangensis_MFLUCC_18_0232 AACTT---TTTCCTGCTCCTGCACTG---GTGTTGCGTTGTCGCTCCGCCTCAGATGTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGAAGCGC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_longicollis_CBS_122066 AGCTT---TTTCCTACTCCTGCACTG---GTGTTGCGTTGTCGCTCCGCCTCAGTTTTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTATTT----TTCTTGCGCCCGGTGTCTCAC---------CGACGCAC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-TCGATCAGC---CGCTAATG Dothiorella_longicollis_CBS_122067 AGCTT---TTTCCTACTCCTGTACTG---GTGTTGCGTTGTCGCTCCGCCTCAGTTTTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGACGCAC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_longicollis_CBS_122068 AGCTT---TTTCCTACTCCTGTACTG---GTGTTGCGTTGTCGCTCCGCCTCAGTTTTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAATTCTCCACATTTGATTTTTTT----TTCTTGCGCCCGGTGTCTCAC---------CGACGCAC-ATGCCCC---TCACCAAC-----AAAAAACACTGAGCCACTCA-ACGATCAGC---CGCTAATG Dothiorella_magnoliae_CFCC_51563 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCTACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_magnoliae_CFCC_51564 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCTACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_mangifericola_CBS_124726 CAATT---TTTCCTGCTCCTGCACCG---GTGTTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCATC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_mangifericola_CBS_124727 CAATT---TTTCCTGCTCCTGCACCG---GTGTTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCATC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_mangifericola_was_rosulata_CBS_121760 CAATT---TTTCCTGCTCCTGCACCG---GTGTTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCATC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_mangifericola_was_rosulata_CBS_121761 CAATT---TTTCCTGCTCCTGCACCG---GTGTTGGGTCGCTGCG-CACCTCACAT-TGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCATC----------CACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_moneti_MUCC505 TGCTC---TCTTCCGCTCCAGCACCG-----------CTGCTGCTTCACCTCGCCTCTGCCTCGTCGCTCTCAGTGGTGAGGGGCATTTTG-GATGGTGGGGTTGGCCCGCGCGCTA------------GC-TTCGGCAAAAAACCCACATTTGGATTTT----------TGCGCCCGGTGGCACGC---------CGAAGCGC-GCGCCCCC--TCGTCA-------GAAAACAATCGAGCCAGTCA-GCGATCGTC---TGCTAATG Dothiorella_omnivora_CBS_124716 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGGCTTTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_omnivora_CBS_140349 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGGCTTTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_omnivora_CBS_188.87 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGGCTTTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_parva_CBS_124720 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_parva_CBS_124721 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_parva_CBS_134885 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------TAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_parva_CBS_134887 AAC-----TTTTTTGCTCCTT-------------------CACACCCACCTGAGATTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_plurivora_CBS_124724 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACATCTGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGTCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_pretoriensis_CBS_130404 CGCTC--TTTTCCCGCTCCTGCACCG-----------CT-GCCTCACACGTCGTCTTTGCCCCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAGACCTGGTTGGTGC-TTCGGCAAAAAACCCACATTTGGTTTTTT---------TGCGACCGGTGGCACCC---------CGAAGCGC-GCGCCCCC--TCGTC--------AGAACAATTCGAGCCACTCA-GCGATCACT---TGCTAATG Dothiorella_prunicola_CBS_124723 AACTT-------CTGCTCTTGCACCG---CTGCGCCCACCTGACCTGACCATACATTTGCCCCGTCGCTT----TGGTGAGGGGCATTTTG-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTG------CTCTGGGTCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------TAAGAAATCCGAGCCACTCA-ACGATCAGC---TGCTAATG Dothiorella_eriobotryae_was_rhamni_CBS_145976 AACTT-----TTTCGCTCTTCCACTC-----------ACTCGCATCCACCCGACATCTGCCTCGTCGCTT----TGATGAGGGGCATTTTG-GATGGTGGGGTTGGCCCGCGCGCTAGACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTCTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCAC---T------------CAAACATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_eriobotryae_CBS_140852 AACTT-----ATTCGCTCTTTCACTC-----------ACTCGCACCCACCCGACATCTGCCTCGTCGCTT----TGGTGAGGGGCATTTTG-GATGGTGGGGTTGGCCCGCGCGCTAGACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTCTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCAC---T------------CAAACATTCCGAGCCACTCA-GCGACCAGC---TGCTAATG Dothiorella_santali_MUCC509 TTTTC---TCCTCCGCTCCAGCACCG--------------CTGCTTCACCTCGACTTTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTA------------GC-TTCGGCAAAAAACCCACATTTGGATTTT----------TGCGCCCGGTGGCACGC---------CGAAGCGC-GCGCCCCC--CTCGTC-------AGAAAAATTCGAGCCACTCA-GCGATCGTC---TGCTAATG Dothiorella_sarmentorum_CBS_164.33 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sarmentorum_CPC_31043 AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sarmentorum_IMI_63581b AAC-----TTTTCCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTTGCGCCCGGTGTCACCCCGATGCCCCCGATGCGC-GCGTCCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sarmentorum_was_americana_CBS_128309 AACT----TTTTCCGCTCTTT-------------------CACACCCACCTGACATTTGTCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCTC-TTCGGCAAAATCTCCACATTTGATTTTT-------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTTCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sarmentorum_was_americana_CBS_128310 ???????????????????????????????????????????????????????TTTGTCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCTC-TTCGGCAAAATCTCCACATTTGATTTTT-------CTTTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTTCC---TCAC---------CAAAAACTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sempervirentis_CBS_124718 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCCT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCCT--TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sempervirentis_CBS_124719 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCCT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCCT--TCAC---------CAAAAACTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_sp._1_CBS_121783 AGCTC--TTTTCCCGCTCCCGCATCG--------------CTGCT-CACTTCGTCTCTGCCTCGTCACTT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTA----------GTGC-TTCGGCAAAAAACCCACATTTGGTTTTTT---------TGCGACCGGTGGCACGC---------CGAAGCGCCGCGCCCCC--TCGTC--------ACAACCTCTAGAGCCACTCA-GCGATCATCATGTGCTAATG Dothiorella_sp._1_CBS_121784 AGCTC--TTTTCCCGCTCCCGCATCG--------------CTGCT-CACTTCGTCTCTGCCTCGTCACTT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTA----------GTGC-TTCGGCAAAAAACCCACATTTGGTTTTTT---------TGCGACCGGTGGCACGC---------CGAAGCGCCGCGCCCCC--TCGTC--------ACAACCTCTAGAGCCACTCA-GCGATCATCATGTGCTAATG Dothiorella_sp._1_CBS_121785 AGCTC--TTTTCCCGCTCCCGCATCG--------------CTGCT-CACTTCGTCTCTGCCTCGTCACTT----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTA----------GTGC-TTCGGCAAAAAACCCACATTTGGTTTTTT---------TGCGACCGGTGGCACGC---------CGAAGCGCCGCGCCCCC--TCGTC--------ACAACCTCTAGAGCCACTCA-GCGATCATCATGTGCTAATG Dothiorella_striata_CBS_124730 TGCTT---TTCCCGCTCTTTGCACCG---GTGTCGCGTTGCCGCCTTGCCTCAGATTTGCCTCAACACT-----TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTA-GCCTCGTTTGCGC-TTCGGCAAAATCCCCACATTTGATTTTTTT----CCTCTGCGCCCGGTGTCACAC---------CGAAGCGC-GCTCCGCC--CCTCA--------CCAAAAAGTCAAGCCACTCA-GCGACCAGC---TGCTAATG Dothiorella_striata_CBS_124731 TGCTT---TTCCCGCTCTTTGCACCG---GTGTCGCGTTGCCGCCTTGCCTCAGATTTGCCTCAACACT-----TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTA-GCCTCGTTTGCGC-TTCGGCAAAATCCCCACATTTGATTTTTTT----CCTCTGCGCCCGGTGTCACAC---------CGAAGCGC-GCTCCGCC--CCTCA--------CCAAAAAGTCAAGCCACTCA-GCGACCAGC---TGCTAATG Dothiorella_striata_was_neclivorem_DAR_80992 TGCTT---TTCCCGCTCTTTGCACCG---GTGTCGCGTTGCCGCACCGCCTCAGATTTGCCTCAACACT-----TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTA-GCCTCGTTTGCGC-TTCGGCAAAATCCCCACATTTGATTTTTTT---CCCTCTGCGCCCGGTGTCACAC---------CGAAGCGC-GCTCCGCC--CCTCA--------CCACAAAGTCAAGCCACTCA-GCGACCAGC---TGCTAATG Dothiorella_symphoricarpicola_CBS_135622 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTTTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CBS_135623 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CBS_135847 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CPC_30972 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CPC_30976 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CPC_31033 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_CPC_33923 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_symphoricarpicola_MFLUCC_13_0497 AAC-----TTTTTTACTCCTT-------------------CACACCCACCTGACATTTGCCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTC------CTTCGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_tectonae_MFLUCC_18_0382 AACTA----CTTTTATTCCTGCACCG---GTGTCACGCTGCTGCTCCGCCTCAGATTTGCCTCGTCACTTT---TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAA-CTCGTTTGCGC-TTCGGCAAAATCTCCACATTTGATTTTTTT----CTTTTGCGCCCGGTGCAACAC---------CGATGCGC-ATGCCCC---TCGCCAAC-----AAAATATCATGAACCACTCA-ACGTCCAGC---TGCTAATG Dothiorella_thailandica_CBS_133991 AACTT----CTTCCACTCTTACACTGCTGGTGGCGTCGGGTTGCCTCACCTCAGATTTGCCTTGTCGCCTT-GTTGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAGACCCCGTTGGGGC-TTCGGCAAATTCTCCACATTTGATTTTTT------CCCTGCGCTTGGTGTCAC-----------CGATTCGC-GCGCCCC---TC-----------ACCAAAATTCGAGCCATTCA-ACGATCGGC---TGCTAATG Dothiorella_thripsita_CBS_125445 CTCTT---TTTCCCGCTCCTGCACCG--------------CTGCTTCACATCGTCTCTGCCTCGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGTGCTAAACCGCGTTGGTGC-TTCGGCAAAAAACCCACATTTGGTTTTTT---------TGCGCCCGGTGGCACCC---------CGAAGCGC-GCGCCACC--TCGTCA-------AGAAAAATTCGAGCCACTCA-GCGATCATC---AGCTAATG Dothiorella_ulmacea_CBS_138855 AACTT----TTTCCTCCCTCGCACCC---GCACTGGC---CTGCCTCACCTCA-GTGTGCCTTATCGCTT----CGGTGAGGGGCATTTTT-GATGGTGGGGCCGGTCC--GCGCTAGCCCTCGTTCGCGC-TTCGGCAATTTCTCCACATCTGGTTTTTC---------TGCGACCGGTGTGACGC---------CGATGCGC-GCGCCCC---TCGCCAAA-----AAAAAAAATCGAGCCACTCA-GCGATCGTC---TGCTAATG Dothiorella_ulmacea_CBS_140005 AACTT----TTTCCTCCCTCGCACCC---GCACTGGC---CTGCCTCACCTCA-GTGTGCCTTATCGCTT----CGGTGAGGGGCATTTTT-GATGGTGGGGCCGGTCC--GCGCTAGCCCTCGTTCGCGC-TTCGGCAATTTCTCCACATCTGGTTTTTC---------TGCGACCGGTGTGACGC---------CGATGCGC-GCGCCCC---TCGCCAAA-----AAAAAAAATCGAGCCACTCA-GCGATCGTC---TGCTAATG Dothiorella_ulmacea_CBS_141414 AACTT----TTTCCTCCCTCGCACCC---GCACTGGC---CTGCCTCACCTCA-GTGTGCCTTATCGCTT----CGGTGAGGGGCATTTTT-GATGGTGGGGCCGGTCC--GCGCTAGCCCTCGTTCGCGC-TTCGGCAATTTCTCCACATCTGGTTTTTC---------TGCGACCGGTGTGACGC---------CGATGCGC-GCGCCCC---TCGCCAAA-----AAAAAAAATCGAGCCACTCA-GCGATCGTC---TGCTAATG Dothiorella_uruguayensis_CBS_124908 GACTT---TTCCCGTCCTTTGCACCG---GCGTCGCGTTGTCGTTTCGCCTCAGATTTGCCTCAACGCT-----TGGTGAGGGGCATTTTT-GATGGTGGGGTTGGCCCGCGCGCTAAGCCTCGTTTGCGC-TTCGGCAAAATCCCCACATTTGATTTTATT----CCTATGCGCCCGGTGTCACAC---------CGAAACGC-GCGCTCTG--CCCCTCA------CCAAAAAGTCAAGCCACTCA-GCGACAAGC---TGCTAATG Dothiorella_vidmadera_CPC_30614 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGGAATTTGTCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATCTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_vidmadera_DAR_78992 AACT----TTTTTCGCTCCTT-------------------CACACCCACCTGGAATTTGTCTTGTCGCTC----TGGTGAGGGGCATTTTC-GATGGTGGGGTTGGCCCGCGCGCTAAACCTCGTTTGCGC-TTCGGCAAAATCTCCACATCTGATTTTTC------CATTGCGCCCGGTGTCACCC---------CGATGCGC-GCGTCCC---TCAC---------CAAAAATTCTGAGCCACTCA-GCGATCAGC---TGCTAATG Dothiorella_vinea_gemmae_CPC_29689 AGCTC----ATTCCACTCCTGCACTG---GTGTCGCGTTGCCACGCCACCTCAGACTTGCCTCGTCATTTT---TGGTGAGGGGCATTTTTTGATGGTGGGGTTGGCCCGCGCGCTAAACCCCGTTCGTGT-TTCGGCAAAATCTCCACATTTGATTTTTTTTTTCTCGCTGCGCCCGGTGTCACAC---------CGATGCGC-GCGCCTCT--TCA----------CCAAAATTCCGAGCCACTCA-GCGATCGGT---CGCTAATG Dothiorella_vinea_gemmae_DAR_81012 AGCTC----ACTCCACTCCTGCACTG---GTGTCGCGTTGCCACGCCACCTCAGACTTGCCTCGTCATTT----TGGTGAGGGGCATTTTTTGATGGTGGGGTTGGCCCGCGCGCTAAGCCCCGTTCGTGT-TTCGGCAAAATCTCCACATTTGATTTTTTTTTTCTCGCTGCGCCCGGCGTCACAC---------CGATGCGC-GTGCACCT--TCG----------CCAAAATTCCGAGCCACTCA-GCGATCGGT---CGCTAATG Dothiorella_viticola_CBS_112869 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CBS_117006 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACATCTGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_viticola_CBS_117007 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CBS_117008 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CBS_117009 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CBS_120999 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACATCTGCCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_viticola_CMW_37930 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CMW_37931 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CMW_37933 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CPC_33136 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_CPC_33257 CAATT---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACAC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_was_westralis_DAR_80529 CAA-T---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA---------------TTTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_viticola_was_westralis_WA10NO03 CAA-T---TTTCCTACTCCTGCAACG---GTGCTGGGTCGCTGCG-CACCTCACATCTACCTCAACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA---------------TTTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGCGCCACAT--GATATCAGC---TGCTAATG Dothiorella_yunnana_CGMCC_3.17999 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCTCGACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGTGCCACAT--GCCATCAGT---TGCTAATG Dothiorella_yunnana_CGMCC_3.18000 CAATT---TTTCCTGCTCCTGCACCG---GTGCTGGGTCGCTGCG-CACCTCACAT-TGCCTCGACGCTT----TGGTGAGGGGTATTTTT-GATGGTGGGGTTGGCCCGAGCGCGC-------TTTGTG--CTCGGCAAA----------------TTTT------TTTTGCGCCCGGTGCCACCC---------CAATGCGC-GCGCCCC---TCACC----------AACACTTTGTGCCACAT--GCCATCAGT---TGCTAATG Neofusicoccum_luteum_CBS_121482 TTTTTCGTTCCGCTGCCCGCGCGATG---GTGCTGGG---ATGCCGCA-CTCA-ATTTGTCTTATCGCTT----CGGTGAGGGGCATTTT--GGTGGTGGGGTCGGCCC--GCGCTAAGCCTCGTTTGTGC-TTCGGCAAAATCTCCGCATCTGGTTTTT----------TGCGACCGGCGTGCGAC---------CGACGCGC-ACCCC-----TCGCC-----------AGACTCGCAGCCACACGTGCGATCGGA---CGCTAACG ; END; BEGIN mrbayes; outgroup Neofusicoccum_luteum_CBS_121482; charset locus1 = 1 -269; partition AllLoci = 1 : locus1; log start filename = DothiorellaTEFMB.log; END; BEGIN mrbayes; set partition = AllLoci; prset applyto = ( 1 ) statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); Lset applyto = ( 1 ) nst = 6 rates = gamma; unlink shape = ( all ) pinvar = ( all ) statefreq = ( all ) revmat = ( all ); mcmcp ngen = 1000000000 nchains = 4 printfreq = 10 temp = 0.2 samplefreq = 10 savebrlens = yes stoprule = yes stopval = 0.01 Relburnin = yes BurninFrac = 0.25 filename = DothiorellaTEFMB; mcmc; sump; sumt; END; BEGIN TREES; Title 'Trees from "S3B_DothiorellaTEFMB.nexus"'; ID 01761de9158337; LINK Taxa = Taxa; TRANSLATE [0] 1 Dothiorella_acacicola_CBS_141295, [1] 2 Dothiorella_acericola_HNXX032, [2] 3 Dothiorella_acericola_KUMCC_18_0137, [3] 4 Dothiorella_alpina_CGMCC_3.18001, [4] 5 Dothiorella_brevicollis_CBS_130411, [5] 6 Dothiorella_brevicollis_CBS_130412, [6] 7 Dothiorella_californica_CBS_119635, [7] 8 Dothiorella_californica_CBS_141587, [8] 9 Dothiorella_capri_amissi_CBS_121763, [9] 10 Dothiorella_capri_amissi_CBS_121878, [10] 11 Dothiorella_casuarinae_CBS_120688, [11] 12 Dothiorella_casuarinae_CBS_120689, [12] 13 Dothiorella_casuarinae_CBS_120690, [13] 14 Dothiorella_citricola_CBS_124728, [14] 15 Dothiorella_citricola_CBS_124729, [15] 16 Dothiorella_citricola_CBS_130415, [16] 17 Dothiorella_diospyricola_CBS_145972, [17] 18 Dothiorella_dulcispinae_CBS_121764, [18] 19 Dothiorella_dulcispinae_CBS_130413, [19] 20 Dothiorella_dulcispinae_was_oblonga_CBS_121765, [20] 21 Dothiorella_dulcispinae_was_oblonga_CBS_121766, [21] 22 Dothiorella_dulcispinae_was_oblonga_CBS_130414, [22] 23 Dothiorella_guttulata_CBS_134886, [23] 24 Dothiorella_guttulata_CBS_134888, [24] 25 Dothiorella_iberica_CBS_113189, [25] 26 Dothiorella_iberica_CBS_115035, [26] 27 Dothiorella_iberica_CBS_115036, [27] 28 Dothiorella_iberica_CBS_115037, [28] 29 Dothiorella_iberica_CBS_115039, [29] 30 Dothiorella_iberica_CBS_115040, [30] 31 Dothiorella_iberica_CBS_115041, [31] 32 Dothiorella_iberica_CBS_121001, [32] 33 Dothiorella_iberica_CBS_130984, [33] 34 Dothiorella_iberica_CBS_133500, [34] 35 Dothiorella_iberica_PD257, [35] 36 Dothiorella_iberica_UCD1448SLO, [36] 37 Dothiorella_iberica_UCR_DI3, [37] 38 Dothiorella_iberica_UCROK1227, [38] 39 Dothiorella_iberica_UCROK1396, [39] 40 Dothiorella_iranica_CBS_124722, [40] 41 Dothiorella_italica_CBS_115038, [41] 42 Dothiorella_italica_CBS_122805, [42] 43 Dothiorella_italica_CBS_122806, [43] 44 Dothiorella_italica_CBS_910.73, [44] 45 Dothiorella_italica_CPC_30616, [45] 46 Dothiorella_italica_CPC_33887, [46] 47 Dothiorella_italica_CPC_35506, [47] 48 Dothiorella_italica_CPC_35540, [48] 49 Dothiorella_italica_MFLUCC_17_0951, [49] 50 Dothiorella_lampangensis_MFLUCC_18_0232, [50] 51 Dothiorella_longicollis_CBS_122066, [51] 52 Dothiorella_longicollis_CBS_122067, [52] 53 Dothiorella_longicollis_CBS_122068, [53] 54 Dothiorella_magnoliae_CFCC_51563, [54] 55 Dothiorella_magnoliae_CFCC_51564, [55] 56 Dothiorella_mangifericola_CBS_124726, [56] 57 Dothiorella_mangifericola_CBS_124727, [57] 58 Dothiorella_mangifericola_was_rosulata_CBS_121760, [58] 59 Dothiorella_mangifericola_was_rosulata_CBS_121761, [59] 60 Dothiorella_moneti_MUCC505, [60] 61 Dothiorella_omnivora_CBS_124716, [61] 62 Dothiorella_omnivora_CBS_140349, [62] 63 Dothiorella_omnivora_CBS_188.87, [63] 64 Dothiorella_parva_CBS_124720, [64] 65 Dothiorella_parva_CBS_124721, [65] 66 Dothiorella_parva_CBS_134885, [66] 67 Dothiorella_parva_CBS_134887, [67] 68 Dothiorella_plurivora_CBS_124724, [68] 69 Dothiorella_pretoriensis_CBS_130404, [69] 70 Dothiorella_prunicola_CBS_124723, [70] 71 Dothiorella_eriobotryae_was_rhamni_CBS_145976, [71] 72 Dothiorella_eriobotryae_CBS_140852, [72] 73 Dothiorella_santali_MUCC509, [73] 74 Dothiorella_sarmentorum_CBS_164.33, [74] 75 Dothiorella_sarmentorum_CPC_31043, [75] 76 Dothiorella_sarmentorum_IMI_63581b, [76] 77 Dothiorella_sarmentorum_was_americana_CBS_128309, [77] 78 Dothiorella_sarmentorum_was_americana_CBS_128310, [78] 79 Dothiorella_sempervirentis_CBS_124718, [79] 80 Dothiorella_sempervirentis_CBS_124719, [80] 81 Dothiorella_sp._1_CBS_121783, [81] 82 Dothiorella_sp._1_CBS_121784, [82] 83 Dothiorella_sp._1_CBS_121785, [83] 84 Dothiorella_striata_CBS_124730, [84] 85 Dothiorella_striata_CBS_124731, [85] 86 Dothiorella_striata_was_neclivorem_DAR_80992, [86] 87 Dothiorella_symphoricarpicola_CBS_135622, [87] 88 Dothiorella_symphoricarpicola_CBS_135623, [88] 89 Dothiorella_symphoricarpicola_CBS_135847, [89] 90 Dothiorella_symphoricarpicola_CPC_30972, [90] 91 Dothiorella_symphoricarpicola_CPC_30976, [91] 92 Dothiorella_symphoricarpicola_CPC_31033, [92] 93 Dothiorella_symphoricarpicola_CPC_33923, [93] 94 Dothiorella_symphoricarpicola_MFLUCC_13_0497, [94] 95 Dothiorella_tectonae_MFLUCC_18_0382, [95] 96 Dothiorella_thailandica_CBS_133991, [96] 97 Dothiorella_thripsita_CBS_125445, [97] 98 Dothiorella_ulmacea_CBS_138855, [98] 99 Dothiorella_ulmacea_CBS_140005, [99] 100 Dothiorella_ulmacea_CBS_141414, [100] 101 Dothiorella_uruguayensis_CBS_124908, [101] 102 Dothiorella_vidmadera_CPC_30614, [102] 103 Dothiorella_vidmadera_DAR_78992, [103] 104 Dothiorella_vinea_gemmae_CPC_29689, [104] 105 Dothiorella_vinea_gemmae_DAR_81012, [105] 106 Dothiorella_viticola_CBS_112869, [106] 107 Dothiorella_viticola_CBS_117006, [107] 108 Dothiorella_viticola_CBS_117007, [108] 109 Dothiorella_viticola_CBS_117008, [109] 110 Dothiorella_viticola_CBS_117009, [110] 111 Dothiorella_viticola_CBS_120999, [111] 112 Dothiorella_viticola_CMW_37930, [112] 113 Dothiorella_viticola_CMW_37931, [113] 114 Dothiorella_viticola_CMW_37933, [114] 115 Dothiorella_viticola_CPC_33136, [115] 116 Dothiorella_viticola_CPC_33257, [116] 117 Dothiorella_viticola_was_westralis_DAR_80529, [117] 118 Dothiorella_viticola_was_westralis_WA10NO03, [118] 119 Dothiorella_yunnana_CGMCC_3.17999, [119] 120 Dothiorella_yunnana_CGMCC_3.18000, [120] 121 Neofusicoccum_luteum_CBS_121482; TREE Fig._S3B._Bayesian_phylogeny_of_the_Dothiorella_tef1_alignment. = (121:0.1501384,(100:0.002534888,98:0.002362433,99:0.002324235):0.09260823,((1:0.05466537,(((9:0.004898707,10:0.003505039):0.0570182,(69:0.05671179,97:0.03368138,(60:0.02948719,73:0.04903898):0.02906532,(81:0.002582452,82:0.002724305,83:0.002425328):0.05157335):0.03916352):0.02445026,(13:0.003334096,11:0.003571254,12:0.03263761):0.04841674):0.01890669):0.03511775,((((((104:0.004517521,105:0.02337164):0.06916127,(96:0.02793513,(18:0.002377005,19:0.01191551,(22:0.003502626,(20:0.002366636,21:0.002410434):0.005417204):0.004850877):0.03632086):0.08039516):0.02008969,(101:0.05419985,(86:0.0120681,(84:0.002322471,85:0.002340331):0.006673551):0.02909438):0.09607964,(95:0.06936035,(((50:0.002523798,5:0.00235555,6:0.002908579):0.005582988,17:0.01541925):0.008664853,(51:0.008989905,(52:0.002294365,53:0.002149927):0.005513781):0.01446181):0.03511494):0.03637075):0.02458768,((70:0.08030011,(72:0.01285378,71:0.01404302):0.03573687):0.02888825,74:0.00251696,75:0.002548948,76:0.002523099,(77:0.002965114,78:0.003111164):0.01705845,42:0.002885418,43:0.002632233,47:0.002636987,48:0.002430826,(45:0.002365093,46:0.002543301):0.008384101,41:0.002340323,44:0.005790451,49:0.0073993,((7:0.01783089,8:0.01400853):0.004966021,(79:0.002423354,80:0.00263379):0.005392844):0.009835014,((102:0.002433919,103:0.002666875):0.01785792,(61:0.00254016,62:0.002624212,63:0.002703162):0.00644382):0.008549219,(87:0.006257868,88:0.002660315,89:0.002392259,90:0.002581234,93:0.002517531,94:0.002471546,91:0.002600704,92:0.002519173):0.01550973,(64:0.002548237,65:0.002543844,66:0.006077546,67:0.002545846,(23:0.002732008,24:0.002672362):0.006148535):0.00636978,34:0.002492274,39:0.002518735,(36:0.002613405,32:0.002653146):0.009428586,38:0.002428196,37:0.002660563,31:0.002506381,(30:0.002941417,26:0.01058904):0.006061817,27:0.002548271,28:0.002474461,33:0.002606635,25:0.002534465,29:0.002516889,35:0.002465139):0.05232694):0.01920411,(4:0.008610906,(54:0.002517315,55:0.002768499):0.006192217,(119:0.002638053,120:0.002558317):0.008907369,((16:0.002791571,14:0.002666349,15:0.002599429):0.009859704,(56:0.002510594,57:0.002664128,58:0.002505189,59:0.002490244):0.01140753):0.00639136,107:0.002595858,68:0.006207159,((112:0.002428488,113:0.002681788,114:0.002406958,106:0.00248506,109:0.002494416,110:0.002463746,115:0.00247805,116:0.002604813):0.006086994,118:0.002686786,108:0.002636476,117:0.002510881):0.02433065,(2:0.005149242,3:0.003566215):0.02498234,111:0.002717084):0.1128268):0.02100751,40:0.08044093):0.01590852):0.03211048); END; BEGIN TREES; Title 'Trees from "S3B_DothiorellaTEFMB.nexus"'; ID 01761de9159938; LINK Taxa = Taxa; TRANSLATE [0] 1 Dothiorella_acacicola_CBS_141295, [1] 2 Dothiorella_acericola_HNXX032, [2] 3 Dothiorella_acericola_KUMCC_18_0137, [3] 4 Dothiorella_alpina_CGMCC_3.18001, [4] 5 Dothiorella_brevicollis_CBS_130411, [5] 6 Dothiorella_brevicollis_CBS_130412, [6] 7 Dothiorella_californica_CBS_119635, [7] 8 Dothiorella_californica_CBS_141587, [8] 9 Dothiorella_capri_amissi_CBS_121763, [9] 10 Dothiorella_capri_amissi_CBS_121878, [10] 11 Dothiorella_casuarinae_CBS_120688, [11] 12 Dothiorella_casuarinae_CBS_120689, [12] 13 Dothiorella_casuarinae_CBS_120690, [13] 14 Dothiorella_citricola_CBS_124728, [14] 15 Dothiorella_citricola_CBS_124729, [15] 16 Dothiorella_citricola_CBS_130415, [16] 17 Dothiorella_diospyricola_CBS_145972, [17] 18 Dothiorella_dulcispinae_CBS_121764, [18] 19 Dothiorella_dulcispinae_CBS_130413, [19] 20 Dothiorella_dulcispinae_was_oblonga_CBS_121765, [20] 21 Dothiorella_dulcispinae_was_oblonga_CBS_121766, [21] 22 Dothiorella_dulcispinae_was_oblonga_CBS_130414, [22] 23 Dothiorella_guttulata_CBS_134886, [23] 24 Dothiorella_guttulata_CBS_134888, [24] 25 Dothiorella_iberica_CBS_113189, [25] 26 Dothiorella_iberica_CBS_115035, [26] 27 Dothiorella_iberica_CBS_115036, [27] 28 Dothiorella_iberica_CBS_115037, [28] 29 Dothiorella_iberica_CBS_115039, [29] 30 Dothiorella_iberica_CBS_115040, [30] 31 Dothiorella_iberica_CBS_115041, [31] 32 Dothiorella_iberica_CBS_121001, [32] 33 Dothiorella_iberica_CBS_130984, [33] 34 Dothiorella_iberica_CBS_133500, [34] 35 Dothiorella_iberica_PD257, [35] 36 Dothiorella_iberica_UCD1448SLO, [36] 37 Dothiorella_iberica_UCR_DI3, [37] 38 Dothiorella_iberica_UCROK1227, [38] 39 Dothiorella_iberica_UCROK1396, [39] 40 Dothiorella_iranica_CBS_124722, [40] 41 Dothiorella_italica_CBS_115038, [41] 42 Dothiorella_italica_CBS_122805, [42] 43 Dothiorella_italica_CBS_122806, [43] 44 Dothiorella_italica_CBS_910.73, [44] 45 Dothiorella_italica_CPC_30616, [45] 46 Dothiorella_italica_CPC_33887, [46] 47 Dothiorella_italica_CPC_35506, [47] 48 Dothiorella_italica_CPC_35540, [48] 49 Dothiorella_italica_MFLUCC_17_0951, [49] 50 Dothiorella_lampangensis_MFLUCC_18_0232, [50] 51 Dothiorella_longicollis_CBS_122066, [51] 52 Dothiorella_longicollis_CBS_122067, [52] 53 Dothiorella_longicollis_CBS_122068, [53] 54 Dothiorella_magnoliae_CFCC_51563, [54] 55 Dothiorella_magnoliae_CFCC_51564, [55] 56 Dothiorella_mangifericola_CBS_124726, [56] 57 Dothiorella_mangifericola_CBS_124727, [57] 58 Dothiorella_mangifericola_was_rosulata_CBS_121760, [58] 59 Dothiorella_mangifericola_was_rosulata_CBS_121761, [59] 60 Dothiorella_moneti_MUCC505, [60] 61 Dothiorella_omnivora_CBS_124716, [61] 62 Dothiorella_omnivora_CBS_140349, [62] 63 Dothiorella_omnivora_CBS_188.87, [63] 64 Dothiorella_parva_CBS_124720, [64] 65 Dothiorella_parva_CBS_124721, [65] 66 Dothiorella_parva_CBS_134885, [66] 67 Dothiorella_parva_CBS_134887, [67] 68 Dothiorella_plurivora_CBS_124724, [68] 69 Dothiorella_pretoriensis_CBS_130404, [69] 70 Dothiorella_prunicola_CBS_124723, [70] 71 Dothiorella_eriobotryae_was_rhamni_CBS_145976, [71] 72 Dothiorella_eriobotryae_CBS_140852, [72] 73 Dothiorella_santali_MUCC509, [73] 74 Dothiorella_sarmentorum_CBS_164.33, [74] 75 Dothiorella_sarmentorum_CPC_31043, [75] 76 Dothiorella_sarmentorum_IMI_63581b, [76] 77 Dothiorella_sarmentorum_was_americana_CBS_128309, [77] 78 Dothiorella_sarmentorum_was_americana_CBS_128310, [78] 79 Dothiorella_sempervirentis_CBS_124718, [79] 80 Dothiorella_sempervirentis_CBS_124719, [80] 81 Dothiorella_sp._1_CBS_121783, [81] 82 Dothiorella_sp._1_CBS_121784, [82] 83 Dothiorella_sp._1_CBS_121785, [83] 84 Dothiorella_striata_CBS_124730, [84] 85 Dothiorella_striata_CBS_124731, [85] 86 Dothiorella_striata_was_neclivorem_DAR_80992, [86] 87 Dothiorella_symphoricarpicola_CBS_135622, [87] 88 Dothiorella_symphoricarpicola_CBS_135623, [88] 89 Dothiorella_symphoricarpicola_CBS_135847, [89] 90 Dothiorella_symphoricarpicola_CPC_30972, [90] 91 Dothiorella_symphoricarpicola_CPC_30976, [91] 92 Dothiorella_symphoricarpicola_CPC_31033, [92] 93 Dothiorella_symphoricarpicola_CPC_33923, [93] 94 Dothiorella_symphoricarpicola_MFLUCC_13_0497, [94] 95 Dothiorella_tectonae_MFLUCC_18_0382, [95] 96 Dothiorella_thailandica_CBS_133991, [96] 97 Dothiorella_thripsita_CBS_125445, [97] 98 Dothiorella_ulmacea_CBS_138855, [98] 99 Dothiorella_ulmacea_CBS_140005, [99] 100 Dothiorella_ulmacea_CBS_141414, [100] 101 Dothiorella_uruguayensis_CBS_124908, [101] 102 Dothiorella_vidmadera_CPC_30614, [102] 103 Dothiorella_vidmadera_DAR_78992, [103] 104 Dothiorella_vinea_gemmae_CPC_29689, [104] 105 Dothiorella_vinea_gemmae_DAR_81012, [105] 106 Dothiorella_viticola_CBS_112869, [106] 107 Dothiorella_viticola_CBS_117006, [107] 108 Dothiorella_viticola_CBS_117007, [108] 109 Dothiorella_viticola_CBS_117008, [109] 110 Dothiorella_viticola_CBS_117009, [110] 111 Dothiorella_viticola_CBS_120999, [111] 112 Dothiorella_viticola_CMW_37930, [112] 113 Dothiorella_viticola_CMW_37931, [113] 114 Dothiorella_viticola_CMW_37933, [114] 115 Dothiorella_viticola_CPC_33136, [115] 116 Dothiorella_viticola_CPC_33257, [116] 117 Dothiorella_viticola_was_westralis_DAR_80529, [117] 118 Dothiorella_viticola_was_westralis_WA10NO03, [118] 119 Dothiorella_yunnana_CGMCC_3.17999, [119] 120 Dothiorella_yunnana_CGMCC_3.18000, [120] 121 Neofusicoccum_luteum_CBS_121482; TREE 'Fig. S3B (bootstrap support values overlayed). First of 1000 equally most parsimonious trees of the Dothiorella tef1 alignment.' = (121:25,((100:0.0,98:0.0,99:0.0):20,((1:18,(((9:0.0,10:1):13,((13:0.0,11:0.0):1,12:6):10):8,(69:15,(97:5,((60:13,73:11):9,(81:0.0,82:0.0,83:0.0):18):15):5):8):6):19,((((((104:2,105:6):19,(95:20,(((50:0.0,5:0.0,6:0.0):1,17:4):2,(51:2,(52:0.0,53:0.0):1):3):8):17):8,(96:8,((18:0.0,(22:3,(20:0.0,21:0.0):0.0):1):1,19:3):11):22):8,(101:15,(86:4,(84:0.0,85:0.0):1):8):24):7,(70:14,((72:3,71:3):9,((((((74:0.0,75:0.0,76:0.0,42:0.0,43:0.0,47:0.0,48:0.0,41:0.0,44:1,49:1):0.0,(45:0.0,46:0.0):2):9,(77:0.0,78:0.0):6):2,((87:1,88:0.0,89:0.0,90:0.0,93:0.0,94:0.0,91:0.0,92:0.0):3,((64:0.0,65:0.0,66:1,67:0.0,(23:0.0,24:0.0):1):1,34:0.0,39:0.0,(36:0.0,32:0.0):2,38:0.0,37:0.0,31:0.0,(30:0.0,26:2):1,27:0.0,28:0.0,33:0.0,25:0.0,29:0.0,35:0.0):1):1):1,((102:0.0,103:0.0):4,(61:0.0,62:0.0,63:0.0):1):2):1,((7:6,8:3):1,(79:0.0,80:0.0):2):1):16):18):13):4,((((4:3,(2:0.0,3:0.0):7):1,((54:0.0,55:0.0):1,(119:0.0,120:0.0):2,((16:0.0,14:0.0,15:0.0):4,(56:0.0,57:0.0,58:0.0,59:0.0):2):1):1,107:0.0,68:1,111:0.0):1,(((112:0.0,113:0.0,114:0.0,106:0.0,109:0.0,110:0.0,115:0.0,116:0.0):1,108:0.0):0.0,(118:0.0,117:0.0):2):5):51,40:26):9):16):12):22):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 269; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 269; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 269; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1606831769579; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2411782331347902875; tell It; setDefaultOrder 4 54 57 37 31 32 83 84 5 6 8 9 7 43 44 42 33 24 25 27 28 26 104 105 117 118 114 115 119 113 111 112 116 106 120 108 110 109 107 65 80 74 75 81 78 79 76 77 82 30 34 35 36 38 39 45 46 47 48 12 89 90 91 100 101 102 103 50 10 66 68 67 13 69 70 71 72 73 85 86 14 15 16 21 22 20 92 93 94 95 98 99 96 97 29 23 11 2 3 1 19 87 88 17 18 58 49 63 59 60 55 51 52 53 61 62 64 56 40 41 0; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6014013064053860433; mqVersion 361; checksumv 0 3 4282395731 null getNumChars 269 numChars 269 getNumTaxa 121 numTaxa 121 short true bits 15 states 15 sumSquaresStatesOnly 580080.0 sumSquares 580080.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 259; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 2548 1239; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6014013064053860433 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 276; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 2289 1167; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;