NEXUS
[File created by TreeBASE:  7/26/07  20:57:00]
[Matrix accession#: M531]

BEGIN TAXA;
	TITLE M531;
	DIMENSIONS  NTAX=11;
	TAXLABELS
		Corynocarpus_cribbianus	Corynocarpus_similis	Corynocarpus_laevigatus_420517	Corynocarpus_laevigatus_468722	Corynocarpus_dissimilis	Corynocarpus_rupestris_spp_rupestris	Corynocarpus_laevigatus_420527	Corynocarpus_rupestris_spp_arborescens	Corynocarpus_laevigatus_420518	Corynocarpus_laevigatus_420516	Coriaria_arborea
	;
END;

BEGIN CHARACTERS;
	TITLE M531;
	DIMENSIONS NCHAR=724;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Corynocarpus_cribbianus                      TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGTGAACAGGCCGTTGGCCCTTTACCCT-TGCATGGGTGGTGCGGCGGAGAGCACGTGTCTGCGAGAGCAGTTCTGCATATTCCGCTGTGCCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAAACTTGAGACCTTGCCACGATCCTCCCGGTTTCGGGCAGCAAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACAGATATTGGTCTCCCGTGCGACCCTCCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTGGTGCCGCGGCATACGGTGGTTGAAAGACCTCGTGC---AACTTGTCGCGGGTCAAATGC--TGCCTTGAGGCCTCATTAGAACCTACGGTGTCGTGTTTATGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_similis                         TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAGAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACGGGCCATTGGCCCTTTACCCCCTGCATGGGTGGTGCGGCGGAGAGCACGTGTATGCGAGAGCAGTTCTGCATATTCCGTCGTGCCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGAAAACTAAAACTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGCAGCGAACGGGGCTTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACAGATATTGGTCTCCCGTGCGACCCTCCGTGCGGTTGGCCTAAATTTGGGTCCTCGGCGTTTGGTGCCGCGGCATACGGTGGTTGAAAGACCTCGTGCTTAAACTTGTCGCGGGTCAAATGC--TGCCTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTATGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_laevigatus_420517               TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGCGAGAGCAGTTCTGCATATTCCGTCGTGTCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGAAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACATATATTGGTCTCCCGTGCGACCCTTCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTTGTGCCGCGGCATACGGTGGTTGAAAGACCTCGAGC---AACTTGTCGCGGGTCAAATGCATTGCTTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTAAGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_laevigatus_468722               TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGCGAGAGCAGTTCTGCATATTCCGTCGTGTCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGAAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACATATATTGGTCTCCCGTGCGACCCTTCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTTGTGCCGCGGCATACGGTGGTTGAAAGACCTCGAGC---AACTTGTCGCGGGTCAAATGCATTGCTTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTAAGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_dissimilis                      TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTTGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGGCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGTGAGAGCAGTTCTGCATATTCCGTCGTGCCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGCGGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTAGGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCATTGCCCCCA-ATCGCTCATGCTCTCAGGGGCTCCGATGGTTGGGGACAGATATTGGTCTCCCGTGCGACCCTCCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTGGTGCCGCGGCATACGGTGGTTGAAAGACCTCGTGC---AACTTGTCGCGGGTCAAATGC--TGCCTTGAGGCCTCATTAGAACCTACAGCGTCGTGTTTATGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_rupestris_spp_rupestris         ----------------------------------------TGCAAAGCAGAACCACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT-TGCATGGGTGGTGCGGCGGAGAGCACGTGTCTGCGAGAGCAGTTCTGCATATTCCGCTGTGCCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAAACTTGAGACCTTGCCACGATCCTCCCGGTTTTGGGCAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGTCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACAGATATTGGTCTCCCGTGCGACCCTCCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTGGTGCCGCGGCATACGGTGGTTGAAAGACCTCGTGC---AACTTGTCGCGGGTCAAATGC--TGCCTTGAGGCCTCATTAGAACCTACCGTGTCGTGTTTACGACGCTATCAACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_laevigatus_420527               TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGCGAGAGCAGTTCTGCATATTCCGTCGTGTCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGAAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGA?GAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACATATATTGGTCTCCCGTGCGACCCTTCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTTGTGCCGCGGCATACGGTGGTTGAAAGACCTCGAGC---AACTTGTCGCGGGTCAAATGCATTGCTTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTAAGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_rupestris_spp_arborescens       TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGGTACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT-GGCATGGGTGGTGCGGCGGAGAGCACGTGTCTGCGAGAGCAGTTCTGCATATTCCGCTGTGCCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAAACTTGAGACCTTGCCACGATCCTCCCGGTTTTGGGCAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGTCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACAGATATTGGTCTCCCGTGCGACCCTCCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTGGTGCCGCGGCATACGGTGGTTGAAAGACCTCGTGC---AACTTGTCGCGGGTCAAATGC--TGCCTTGAGGCCTCATTAGAACCTACCGTGTCGTGTTTACGACGCTATCAACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_laevigatus_420518               TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGCGAGAGCAGTTCTGCATATTCCGTCGTGTCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGAAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACATATATTGGTCTCCCGTGCGACCCTTCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTTGTGCCGCGGCATACGGTGGTTGAAAGACCTCGAGC---AACTTGTCGCGGGTCAAATGCATTGCTTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTAAGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Corynocarpus_laevigatus_420516               TTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCAAAGCAGAACGACCCGCGAACG-TGTTATATATTAAAATGGGGGAACAGGCCATTGGCCCTTTACCCT--GCATGGGTGGTGCGGCGGAGAGCACGAGTCTGCGAGAGCAGTTCTGCATATTCCGTCGTGTCATTCCCTACAACAACAAACCC-GGCGCGGACTGCGCCAAGGAAACTAAA-CTTGAGACCTAGCCACGATCCTCCCGGTTTCGGGAAGCGAACGGGGCCTGCGTCTT----TAACGATATTCACAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGTTGCCCCCA-ATCTGTCATGCTCTCAAGGGCTCCGATGGTTGGGGACATATATTGGTCTCCCGTGCGACCCTTCGTGCGGTTGGCCTAAATTTGGGTCCTCGGTGTTTTGTGCCGCGGCATACGGTGGTTGAAAGACCTCGAGC---AACTTGTCGCGGGTCAAATGCATTGCTTTGAGGCCTCATTAGAACCTACCGCGTCGTGTTTAAGACGCTATCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
		Coriaria_arborea                             -------------------------ATCATTGTCGATGCCTGCAAAGCAGAACGAC?CGCGAACGCTGTTTTCAATTCTAACGGGAGAACGGGG----------------CCTGCGAGGGCCTCGCACCT-----CCCG----CGGGAGAGCCGTCCC----CTCGCGGGACGTCTGCCCCGAGAACAACGAACCCCGACGCAATCCGCGTCAAGGAAACTGTA-CGAGCGACTTCGCCGTGCCCGCCCCGGAGACGGCGAGCGGACATGGCATGCATCGTCGCGTGATCACAATCACA??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????ACGTCGCCCCCCTAAGCCTCGTGCCCTCGCCGGCAGAGCTT-TCGGGAGCGGACATTGGTCTCCCGTGCGAGCCTGCGCGCGGTTGGCCTAAAGGCGAGTCCCCGGCGTCCGTTGATGCGACACACGGTGGTTGAGATGCTCGGCAT-----GCCGTCGCCTCATCGGTGC---GTCTCGGGTTGGCTCAGCGACCCAAC-----------------TTACCGACGCA--CCCAGGTCAGGCGGGATTA--------------
	;
END;

BEGIN CODONS;
CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;