NEXUS
[File created by TreeBASE:  7/26/07  20:57:29]
[Matrix accession#: M640]

BEGIN TAXA;
	TITLE M640;
	DIMENSIONS  NTAX=50;
	TAXLABELS
		Xeroxyuris_parallela	Trypanoxyuris_trypanuris	Trypanoxyuris_satanas	Trypanoxyuris_minutus	Trypanoxyuris_microon	Trypanoxyuris_croizati	Trypanoxyuris_sceleratus	Trypanoxyuris_clemenentinae	Trypanoxyuris_callicebi	Trypanoxyuris_sciuri	Trypanoxyuris_bicristata	Lemuricola_nycticebi	Trypanoxyuris_duplicidens	Trypanoxyuris_lagothricis	Trypanoxyuris_brachytelesis	Trypanoxyuris_atelis	Lemuricola_microcebi	Lemuricola_contagiosus	Lemuricola_vauceli	Lemuricola_lemuris	Lemuricola_daubentoniae	Lemuricola_bauchotis	Lemuricola_baltazardi	Trypanoxyuris_tamarini	Trypanoxyuris_oedipi	Trypanoxyuris_goeldii	Trypanoxyuris_callithricis	Enterobius_vermicularis	Enterobius_macaci	Enterobius_lerouxi	Enterobius_gregorii	Enterobius_buckleyi	Enterobius_brevicauda	Enterobius_bipapillatus	Enterobius_anthropopitheci	Enterobius_zakiri	Enterobius_presbytis	Enterobius_pitheci	Enterobius_pesteri	Enterobius_paraguerezae	Enterobius_longispiculum	Enterobius_inglisi	Enterobius_guerezae	Enterobius_entellus	Enterobius_colobis	Lemuricola_trichuroides	Inglisoxyuris_inglisi	Cal._blanci	Cal._brygooi	Ctenodatctylina_tunaetae
	;
END;

BEGIN CHARACTERS;
	TITLE M640;
	DIMENSIONS NCHAR=45;
	FORMAT SYMBOLS = " 0 1 2 3 4 5 6 7 " MISSING = ? GAP = - ;
	CHARSTATELABELS
		1 Diaphrg. / abst pst, 2 Sprmthc / present absent, 3 GenTract / prodelphic amphidelphic, 4 Vagina / 'abst->1.2 vgct- rct' '>1.2 vgct- *' '>1.2 vgct+ rct' '>1.2 vgct+ rct lg' '<1.2 vm', 5 ARug / 'pharyng-generalised' inglox 'V crest >3rd' 'U crest >3rd' V_crest__p_3rd tamarini, 6 Cloc_opng / gnrlsd Yshpd prtdg 'Pharyngo+', 7 BrsCd_1 / 'Pharyngo+' 'Inglis+' 'Ent+', 8 BrsCd_2 / 'Ent+p1+' 'Ent+p1+bbl' 'Ent+p1-' 'Ent+p1-phsmd', 9 BrsCd_3 / abst 2d 2d_and_3rd linked extd_lat cone btrfl_shpd, 10 BrsCd_4 / '2d 3rd  -  leaf' '2d 3rd  +  leaf' '2d 3rd  +  lsg', 11 Spcl_Mn / thin thick_sphr thick_sphr_bos thick_mass thck_rctgl tck_verm, 12 Spcl_Cps_1 / feebly_curved rectlgn dble_bowed flexible, 13 Spcl_Cps_2 / 'flex <250' flex_250, 14 Spcl_Pt / sharp_point round_point hooked_point thin_point angled, 15 Tip_tail / absent atrophied present short long, 16 Amphd / 'ped-' 'ped+', 17 CepPlt1 / circular hexagonal rectangular square, 18 CepPlt2 / hexg_reg hexg_irrg '+ slot', 19 CepVes / generalised thick 1st_ring_thick striation_accentuated, 20 Bucc_aprt / 6_lips 3_lips_gnrl 3_lips_rdcd 2_lips, 21 Lips_1 / edge_rnd edge_rnd_rdce 'horse shoe-shaped' thickened lob dors_hztl stuck_teeth, 22 Lips_2 / sym_cal sym_try as_mic as_min, 23 TthApx_1_2 / rnd_smpl rnd_3_dtc flat 'articulated + superstrc' dors_reduced dors_atrphd lemur_type entero_type, 24 TthApx_2 / flat_pent flat_, 25 TthApx_3 / mushrm blades, 26 TthApx_4 / msrm_smpl msrm_1_dtcl, 27 TthApx_4_2 / bld_lrge bld_shrt, 28 Ospg_Blb / smg_abst smshg_pst 'opg.blb<3,15MF', 29 FLw_1 / abst_in_F pst__blb 'pst > blb', 30 FLw_2 / pst__blb_ pst__blb_Y pst__blb_U, 31 FLw_3 / 'pst > blb crvc-' 'pst > blb crvc+', 32 FLw_4 /  U, 33 FLw_5 / _2_crest _2_crests_distant _2_crests_rdtd, 34 FLw_6 / _2_crests_rdtd _2_crests_fus, 35 FLw_7 / U_2_crests_devlp U_2_crests_atr U_1_crest_atel, 36 FLw_8 / _1_crest _2_crests_gde U_1_crest_colob_1 U_1_crest_colob_2 Y_xero, 37 Egg_1 / 'emb+' 'emb-', 38 Egg_2 / 'emb-sharp' 'emb-rd', 39 Egg_3 / 'emb-rd thin' 'emb-rd thick', 40 Egg_2_1_thin / symm asymm_flat, 41 Egg_3_1_thick / sym asymm_cvx asymm_flat, 42 Egg_2_2_thin / Legg_80 'Legg <80 >60' Legg_60, 43 Egg_3_2_thick_2 / 'L70 BL<100' 'L<70 50 BL<100' 'L<70 45 BL>100' 'L<45 BL>100', 44 Egg_3_3_thick / 'BL>100 <115' 'BL>115 <175' 'BL>175', 	45 Egg_3_4_thick / 'BL<100 L45' 'BL>100 L45' 'BL>100 L<45'
	;
	MATRIX
		Xeroxyuris_parallela              110002202-10-00010010-0----12-1----410-------
		Trypanoxyuris_trypanuris          111400221-10-13011214120---12-01--1-111-0-2--
		Trypanoxyuris_satanas             111400221-10-13011214120---12-01--1-111-0-2--
		Trypanoxyuris_minutus             111400221-10-1202-21434----12-01--0-111-0-3--
		Trypanoxyuris_microon             111400221-10-02010014220---12-000---111-0-3--
		Trypanoxyuris_croizati            111400221-10-12011014021---12-000---111-0-3--
		Trypanoxyuris_sceleratus          111400221-11-02010125-1----12-001---111-0-2--
		Trypanoxyuris_clemenentinae       1114???????????03-125-1----12-001---??1-0-2--
		Trypanoxyuris_callicebi           1114???????????011014021---12-000---??1-0-2--
		Trypanoxyuris_sciuri              111400221-21-32010015-0----12-0020--111-0-1--
		Trypanoxyuris_bicristata          111400221-21-32010015-0----12-0021--111-0-1--
		Lemuricola_nycticebi              111020206-30-0300-013-0----112------1101-0---
		Trypanoxyuris_duplicidens         11140022??10-0102-236-4----12-01--2-111-0-3--
		Trypanoxyuris_lagothricis         11140022??10-0202-236-4----12-01--2-111-0-3--
		Trypanoxyuris_brachytelesis       1114???????????02-236-5----1???1--2-???-0-2--
		Trypanoxyuris_atelis              111400221-10-0202-236-5----12-01--2-111-0-3--
		Lemuricola_microcebi              111020216-30-0400-010-0----110------1100-----
		Lemuricola_contagiosus            111020214-30-0400-010-0----110------1100-----
		Lemuricola_vauceli                111131205-40-0000-013-6----111------1101-1---
		Lemuricola_lemuris                111131205-40-0000-013-6----111------1101-2---
		Lemuricola_daubentoniae           111121204-30-0100-013-0----110------1101-1---
		Lemuricola_bauchotis              111131204-10-0100-013-6----111------1101-2---
		Lemuricola_baltazardi             111131205-40-0000-013-6----111------1101-1---
		Trypanoxyuris_tamarini            111450221-11-0203-025-0----22-0020--111-0-0--
		Trypanoxyuris_oedipi              111440231-20-3203-025-0----22-0020--111-0-0--
		Trypanoxyuris_goeldii             111440231-20-0203-025-0----22-0020--111-0-0--
		Trypanoxyuris_callithricis        111440221-21-3203-025-0----22-0021--111-0-0--
		Enterobius_vermicularis           111200223152-20012011-7----12-1----0111-1--2-
		Enterobius_macaci                 111200223242-40012010-7----12-1----1111-1--1-
		Enterobius_lerouxi                111200223?52-10012010-??---1???----0111-1--0-
		Enterobius_gregorii               111200223112-20012011-7----12-1----0111-1--2-
		Enterobius_buckleyi               111200223?52-10012010-??---1?????-??111-1--1-
		Enterobius_brevicauda             111200223042-40012010-7----12-1----1111-1--1-
		Enterobius_bipapillatus           111200223242-40012010-7----12-1----1111-1--1-
		Enterobius_anthropopitheci        111200223112-10012011-7----12-1----(01)111-1--0-
		Enterobius_zakiri                 111300223003100012310-3-1-112-1----3111-2---2
		Enterobius_presbytis              111300223003000012310-3-1-112-1----3111-2---2
		Enterobius_pitheci                1113?0?????????012310-3-1-012-1----3???-2---1
		Enterobius_pesteri                111?00223010-00012312-3-00-12-1??-??111-2---1
		Enterobius_paraguerezae           111200223010-01012312-3-01-12-1----2111-2---0
		Enterobius_longispiculum          111300223003100012310-3-1-012-1----3111-2---1
		Enterobius_inglisi                111?00223010-00012312-3-00-12-1----?111-2---0
		Enterobius_guerezae               111200223010-01012312-3-01-12-1----2111-2---0
		Enterobius_entellus               111300223003000012310-3-1-112-1----3111???-??
		Enterobius_colobis                111200223010-01012312-3-00-12-1----2111-2---2
		Lemuricola_trichuroides           1111???????????00-013-6----111-??-??1101-0---
		Inglisoxyuris_inglisi             000-101-0-10-0010-000-0----11?------0--------
		Cal._blanci                       000-030-0-00-0010-000-0----00-------0--------
		Cal._brygooi                      000-030-0-00-0010-000-0----00-------0--------
		Ctenodatctylina_tunaetae          000-030-0-00-0010-000-0----00-------0--------
	;
END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 WTSET W1 = 1000: 1 - 3 9 12 14 18 - 19 25 , 1: 4 - 8 10 - 11 13 17 20 - 24 26 - 45 , 750: 15 , 500: 16 ; 
 
 END;