NEXUS
[File created by TreeBASE:  7/26/07  20:58:11]
[Matrix accession#: M754]

BEGIN TAXA;
	TITLE M754;
	DIMENSIONS  NTAX=43;
	TAXLABELS
		Trebouxia_impressa_87.017E1	Trebouxia_impressa_M96.026D4	Trebouxia_impressa_M96027D1	Trebouxia_impressa_M96.012A2	Trebouxia_higgensiae	Trebouxia_gigantea	Trebouxia_gelatinosa	Trebouxia_asymmetrica	Trebouxia_arboricola_M96.025C1	Trebouxia_arboricola_92.011C3	Trebouxia_arboricola_SAG219_1a	Trebouxia_pb_Rinodina_milvina	Trebouxia_pb_Rinodina_capensis	Trebouxia_pb_Rinodina_sp	Trebouxia_pb_Rinodina_atrocinerea	Trebouxia_pb_Rinodinella_controversa	Trebouxia_pb_Rinodina_tunicata	Trebouxia_pb_Physcia_tenella	Trebouxia_pb_Physcia_semipinnata	Trebouxia_pb_Phaeophyscia_orbicularis	Trebouxia_pb_Dimelaena_oreina	Trebouxia_pb_Buellia_zoharyi	Trebouxia_pb_Buellia_georgei	Trebouxia_pb_Buellia_elegans	Trebouxia_pb_Anaptychia_runcinata	Trebouxia_pb_Amandinea_puntata	Trebouxia_pb_Physconia_perisidiosa	Trebouxia_pb_Physcia_stellaris_Ps2	Trebouxia_pb_Physcia_stellaris_Ps1	Trebouxia_pb_Physcia_aipolia_Pa1	Trebouxia_pb_Physcia_aipolia_Pa2	Trebouxia_pb_Physcia_adscendens_4	Trebouxia_pb_Physcia_adscendens_3	Trebouxia_pb_Physcia_adscendens_2	Trebouxia_pb_Physcia_adscendens_1	Trebouxia_pb_Anaptychia_ciliaris	Trebouxia_fm_Neofuscelia_pulla	Trebouxia_fm_Parmotrema_tinctorum	Trebouxia_usneae	Trebouxia_jamesii_86.156C3	Trebouxia_jamesii_86.132E1	Trebouxia_jamesii_M97.017A2	Trebouxia_incrustata
	;
END;

BEGIN CHARACTERS;
	TITLE M754;
	DIMENSIONS NCHAR=1675;
	FORMAT DATATYPE = DNA MISSING = . GAP = -  ;
	MATRIX
		Trebouxia_impressa_87.017E1                 TCGTAACAAGGTTTCCGT-AGG--TGCT---TCACTATGCGGACAAAAGCAGGCTTGAAAAGAGTTTCCTGCTAGTGCTTTGCTT--TC------GAGTAAAGTGCGA-CACTGTCAAATTGCCTGGAAA-TCCTGC---TAAGCCCCTGAT-ACCG-C-TCACTT-GAA-GAAA-TTCTTGTGCT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGG-A------TAGGGACAA-TAGGCA-GCCAACTG-CTAAAGAAA-CTCAGCT--------------TTC-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCAGTGGGT-TGAAGTTGGAGTCTTACAATTGGGGCTTCCA---ATAACTTTGGCT-TAAGATATAGTCGGTCC-CTGCTGAAA-AGCAG-CCTGTAAGAGGA-TTTCCCTTTGTGGAAG------------------------GAGAGCTTATAGG-GATCTAAGTAGTA-CTCCTCAGA-GCAATCTGTTGGAGGGCTGTAAACA--------GCC--TTTAGATTGGAACA-AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAGCTCTTGAAAGGGAGTTTGCCGATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCCGCAGCTCTTTGGCTGTCGGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-AA--TTTTTTCTGAAGG---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--AATTAATAA---CGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCTAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCCTT----------------ATGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCTATTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATGGCTCCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCA--------N
		Trebouxia_impressa_M96.026D4                N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................ACC-ATTTA-TGCCCT-TTCTGAAAGGCTACTCTTGAAAGGGAGTTTGCCGGTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CTT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TAAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCT................................................AATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCGA-TTCCCTT----------------GTGGAA--------------------------------------------------------------------------------------------------ATTGGTTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCGATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TG------------------N
		Trebouxia_impressa_M96027D1                 N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............CTCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TAAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCT................................................AATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TG------------------N
		Trebouxia_impressa_M96.012A2                N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.............................TTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCAG-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TG------------------N
		Trebouxia_higgensiae                        TCGTAACAAGGTTTCCGT-AGGT-TATGT--TCACTATGCGGATAAAAGCAGGCCTTAAAAGGGTTTCCTGCTAGTGCTTTGCT---GCAG-----AGCATTGTGCAA-CATCGTCAAATTGCCCGGRAA-TTCCGA---TATGCCCCTGAT-ACTG-C-ACAAGCAATG-GAAA-CATTGCTGAT-G-CA-CCTTGGT-GAAA--GTCGAGG-GTA-TGGT-AACA-ACTCAGAGGGA------TAGGAACAA-TGGGCA-GCCAACTG-CTAAAGGAG-TT-------------------TCC-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCGATGGGT-TGAAAACAAGGCAAACAACACTCGTGGTGGAT-GTCTACAAGCGCT-TAAGATATAGTCGGTCC-TTGCCGAAA-GGCAA-CCTGTGAGAGGA-TTTCTCAGACTGAGATT-----------------------GAGAGCTCACAGGATTCTGGGTAATACTCTGCATTGTAAAATGCCAGAGGGCAGATTTCA-----------GCCTCCAGAA-----------------------------------------.........GTGNCAACACCGCGNACTTTCTAA-TGCCCT-CCTGTCATGTTAGCCTTTTGAAAAAAGGCTTGACTGTGGCAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-AGGCAGGGGCTGGCATCTTATGG-TGTCGGTTAGCCTGTCT--GGGCGGGTCCAA-TATCAATTGGGGGCCTCTTG--CCCACTG---------------------------GGTAAG-G-GGAC-T-GC-CCGATTGTG--AGGGGTGGCT--GTCA-A-TCCAC-A----CTCAAC-AC--AATATACTGAAAG---CAGT-T-CTGCAAGCTGGT-CAT-GCCGGCTGTAGTCTG--AAAAATTAT---AGR-CAACTCTCAACAACGGATATCTTGGCTCCCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCGACTAA-ACTTTCACTGG-GCTTT--CCCACCGGAA--------------------------------------------------------------------------------------------------GGTAGTCGG-ATA--TGG-CCG-TCCGG-ACAGTCCTT-GAGCTGCCGGTCAGCTG--AAATACAAT--CACGCTTTGCGGGCTCCT-TCCTA---------------GAC-GGAA-GGCGAGTTCCGAATT-GGTAGGTAACCTTTGCCGGTTGCATACCTTCGTTGCTCGCTAT-GCCAAGCATCG-GCCGTGTGCA--GGACGCC-TTTT-GGCT.TCGACC-TGAG-TCA------------N
		Trebouxia_gigantea                          TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACTGCGAAAATACTTA-TGCCCT-TCTGGAGTAGGCAGACTTTATTGTTTGCTCTTCGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-TACCAGCCGGACTCACCTTG--CCTTCT----------------------------AGGCTT-G-GGGT-T-CTGCCGGTTGTG--AGGGGTGGCT--GTTT---AACCC-ACT--TTAAGC-AA--TCAATTCTGAAGG---CAGA-T-CTATTGGCTGGC-TTT-GCTGGCTGTAGACTG--ATCAATAAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATCGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-GTTTCCTA----TTTTTA---CTGGGGATGTCTCTTGTTCTTATTTGCGGTGTCTCCTATGTCAATAGGAGATGTCT---------CTTATTTTTATGAGGGATATTACCTGTCCTT-ATAGGAAACGCCGGTTGG-ATC--TGG-CTG-TCCGG-ATTGCCTTTCAGGTTGCCGGTCAGCTG--AAATATAAT--CACGCTCTGGAGGCTGCTTTCCTT--------------TCGA-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAGGTTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGNCAGGCAAGAACACCC
		Trebouxia_gelatinosa                        N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGGAAGGATCATTG-AATC-TATCGTACCCACACCGCGAACC-ATTGA-TGTCCT-CTCAATTTACCCAGCAGGGTGCCGCGATACGTGCTGTTAATGGCATTGCCTAAAAAGGGGTCCACGATACGTGCTACGGCATTGAGTTTAAAGGGGCCCGCGATACGTGCCTAGGCATTGAGT------------------------------------------------------------------------TTAAAGGGTAACCTGCTGGTGAGAGCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGT-AGTTGACTTGGCT--GGGCGGGTCCAA-TACCAATTGGGTTCCTCTTG--GCCTT-----------------------------TGGCTA-A-GAGG-C-TACTCAGCTGTG--AGGGGTGACT--TGAT-C-AACTA------TTAAGC-T---TTATTTCTGAAGA---CAGG---CTGTTAGCTGGC-TT--GCTGGCTGCAGACTG--AATTAACAA-A-AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCTAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCAA-TTACCTT----------------GTGATG--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TGTTCCGATCAGGTTACCGGTCAGCTG--AAAAACATT--CGCGCTGTGGAAGTCGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGTTCTGGCTTTCATGAT-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC---------------------N
		Trebouxia_asymmetrica                       TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAACTACTTA-TGCCCT-TCTGGAACCGGCAAACTTTATTGTTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CACCAGCCGGACTCACCTTG--CCTTT-----------------------------GGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACCC-ACTT-TTAAGC-AA--TCAAATCTGAAGT---CAGA-T-CTACAGGCTGGC-TTTTGCCGGCTGTGGACTG--GATAAATAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTTGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-GTTCCCTA----TGTACA---TAGGGGAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGAGCCGCTTTCCTT--------------CCGA-GGAGAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAAGCTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_arboricola_M96.025C1              N----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCCACACCGCGAAAATACTTA-TGCCCT-TCTGGGGTCAGCAAGCTTTACTGTTTGCTCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CACCAGCCGGATTCACCTTG--TCTC------------------------------TGGCAA-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACT--TTAAGC-AA--TTAATTCTGAAGA---CAGA-C-CTACTGGCTGGC-ATT-GCTGGC-GTAGGCTG--AAAAACTAT---AGA-CAACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCGTGAACCATCGAATCTTTGAACGCAA-TTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TCATTGA--TAGGGGAT--------------------------------------------------------------------------------------------------GCCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGGGCTGCTTTCCTC-GAAAGGCTA-CTT-CGA-GGGGAGGTGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAAGCTTCCCAGTAG-TCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGA-----------------------N
		Trebouxia_arboricola_92.011C3               ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAAATACTTA-TGCCCT-TCTGGGGTCAGCAAGCTTTACTGTTTGCTCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CACCAGCCGGATTCACCTTG--TCTC------------------------------TGGCAA-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACT--TTAAGC-AA--TTAATTCTGAAGA---CAGA-C-CTACTGGCTGGC-ATT-GCTGGCTGTAGGCTG--AAAAACTAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TCATTGA--TAGGGGAT--------------------------------------------------------------------------------------------------GCCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGGGCTGCTTTCCTC-GAAAGGCTA-CTTTCGA-GGGGAGGTGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAAGCTTCCCAGTAG-TCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGA-----N
		Trebouxia_arboricola_SAG219_1a              TCGTAACAAGGTTTCCGT-AGGT-T------T-ACTATGCGGATAATAGCAGACTTGAAAAGAGTTTTCTGCTAGTGCTTTGC----TCA-------GCTAAGCGCGA-CACTGTCAAATTGCCTGGAAC-TCCTGC---TAAGCCCCTGAT-ACCG-C-TCATTT-GAG-GAAA-CTCACATGCT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGGGA------TAGGGACAA-TAGGCA-GCCAACTG-CTAAAGGGG-TTTGTAC--------------TCA-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCAGTGGGT-TAAAAGGATGCTGGTATTTTGACCGTT------TTCCTTTTGGCT--TAAGATATAGTCGGTCC-CCGCTGGAA-GGCGG-TTTGTGGGAGGA-TTTCTCATTGAGAAG-------------------------GAGAGCCCACAGGAATCTGGGTAATACTCGTCAATGCAAGTTGACAGAGGGCTAAACAAA-----------GCCTCCAGGTTGGAATA---AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAAATGCTTA-TGCCCT-TCTGGAGTAAGCAAGCTTGACTGCTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GATCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGATT--GGGCGGGTCCAA-TATCAGCCGGATTCCCCTTG--AGAGACTTTGTGGAGGCTGACGGTCTCACCCAA-TGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACT--TTAAGC-AA--TCAATTCTGAAGA---CAGC-T-CTATTGGCTAGC-ATT-GCTGGCTGTAGACTG--AACAAATAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TGAAAGAC-TAGGGGAT--------------------------------------------------------------------------------------------------GCCAGTTGG-ATA--TGG-CAG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATATATT--CACGCTCTGGGGGCTGCTTTCCTT-GAAAGGCTA-CTTTCAA-GGGGAGGSSAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAAGCTTNCCAATAG-TGC-TGTGCA--GGACGCC-TTTT-GGCTTTCGACC-T-------------------N
		Trebouxia_pb_Rinodina_milvina               NCGTAACAAGGTTTCCGT-AGG--TACT---TCACTATGCGGACAAAAGCAGGCTTGAAAAGAGTTTCCTGCTAGTGCTTTGCTTTAC-------TGCAAAGT-GCGACTACTGTCAAATTGCCTGGT------------TAAGCCCCCTGGATACCCGCTCACATA----GAA--TTCTGGTGNT-G-CACCCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGR-R------TAAGGACAA-TAGGCA-GCCAACTG-CTAAAGGAA-CTCAAG--------------TTCCCCATGCAGGCAGT-CCA-CAGACTAAA-TGACAGTGGGT-TAAAGTTGAAGGCTATGC--------------ATACAACTTTGGCT-TAAGATATAGTCGGTCC-CTGCCGAAA-GGCAG-CCTGTGAGAGGA-TTTCCCTTTGTGGAAG------------------------GAGAGCTTAACAGGAATCTAAGTAGTACTCTGCAGAGCAATCTGTGAGAGGGCAACAACAA----------GCC--TTTAGATTGGAATG-AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAACTCTTGAAAGGGAGTTTGCCGGTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CTT-------------------------------GGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-AA--TTT--TCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCCA-TTCCCTT----------------GTGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCNTTCGTNGCTCGCAATNGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCN
		Trebouxia_pb_Rinodina_capensis              TCGTAACAAGGTTTCCGT-AGG--TACT---TCACTATGCGGACAAAAGCAGGCTTGAAAAGAGTTTCCTGCTAGTGCTTTGCTTTAC-------TGCAAAGT-GCGA-CACTGTCAAATTGCCTGGAAA-TCCTGG---TAAGCCCCTGAT-ACCG-C-TCACTA-GAA-GAAA-TTCTGGTGTT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGG-A------TAAGGACAA-TAGGCA-GCCAACTG-CTAAAGGAA-CTCAAG--------------TTCC-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCAGTGGGT-TAAAGTTGAAGGCTATGC--------------ATACAACTTTGGCT-TAAGATATAGTCGGTCC-CTGCTGAAA-GGCAG-CCTGTGAGAGGA-TTTCCCTTTGTGGAAG------------------------GAGAGCTTACAGG-AATCTAAGTAGTACTCTGCAGAGCAATCTGTGAGAGGGCAACAACAA----------GCC--TTTAGATTGGAATG-AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAACTCTTAAAAAGGAGTTTGCCGGTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CTT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TAAAGC-AA--TTT--CCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCCA-TTCCCTT----------------GTGGAA--------------------------------------------------------------------------------------------------ATTGGTTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATAGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Rinodina_sp                    N--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCATAGGATTCTGGTTAATACTCGGCATTGTGAAATGCTAGAGGGCAAATCAAG-----------GCCTCCAGGAATGGAAAA--AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGTTAACCCCGCGAACTTACTGA-TGCCCT-CCTGTCATAGGCAGTGCTGTGAAA--GGCTTGCCTT-GATGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-GGTCAGGGGCAGGCATCTTATGG-TGTCGGTTAGCCTGACT--GGGCGGGTCCAA-AATCAATCTGGGGCCC-CTG--CCGCATA---------------------------GGTAGA-G-GGAC-T-GCCCGGGTTGTG--AGGGGTGGCT--GTTT-A-ACCCA-C----TTCCAA-TCA-ATTTTTCTGAAGC---NAGT-A-CTACTGGCTGGN-CAT-GCCGGCTGTAGTCTG--TCTAACTAA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-ACTTCCATTGT-ATTG----CAATGGGAA--------------------------------------------------------------------------------------------------TGCAGTTGG-AAT--TGG-CCG-TCCGG-TTGACCCTTGAGGTTGCCGGTCAGCTG--AAATATATG--CACGCTTTGTGGGCCCCTTTCCTT----------------GT-GGAAAGGCGAGCTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGATGCTCGCTAT-GCTTTTCATTG-GCAGTGTACA--GGACGCA-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_pb_Rinodina_atrocinerea           N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................TTCAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCGGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTCGACT--GGGCGGGTCCAA-TACCAGCCGGATTCCTCACG--CCTCT-----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTC---AACTC-ACT--CCAAGC-AA--TCAACTCTGAAGG---CAGA-T-CTATAGGCTGGC-TTT-GCTGGCTATAGACTG--ATCAATATC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-CTTTCCTA----TTTTGA---TNGGGGATGTTTCTTGTCCTTAAAGGGGAAGTTTCCTATTTTATAGGAGATTTTT----------CTCGTTTTGACAGGAAATATTTCCTGTTCTTTATGGGGGAGGCCGGTTGG-ATC--TGG-CCG-TCCGG-ATTGCCTTTCAGGCTGCCGGTTGGCTG--AAATACATT--CACGCTCTGGGGGTTGCTTTCCTT--------------TCAA-GGAGAGACGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGTTAGGCTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAA-------N
		Trebouxia_pb_Rinodinella_controversa        TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGCGCCCACACTGCGAAA-TACTTA-TGCCCT-TCTGGAGTAGGCAGACTTTATTGTTTGCTCTTCGGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-TACCAGCCGGACTCACCTTG--CCTTCT----------------------------AGGCTT-G-GGGT-T-CTGCCGGTTGTG--AGGGGTGGCT--GTTT---AACCC-ACT--TTAAGC-AA--TCAATTCTGAAGG---CAGA-T-CTATTGGCTGGC-TTT-GCTGGCTGTAGACTG--ATCAATAAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-GTTTCCTA----TTTTTA---CTGGGGATGTTTCTTGTTCTTATTTGCGGTGTCTCCTATGTCAATAGGAGATGTCT---------CTTATTTTTATGAGGGATATTACCTGTCCTT-ATAGGAAACGCCGGTTGG-ATC--TGG-CTG-TCCGG-ATTGCCTTTCAGGTTGCCGGTCAGCTG--AAATATAAT--CACGCTCTGGAGGCTGCTTTCCTT--------------TCGA-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCTCGCTAGGTTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCN
		Trebouxia_pb_Rinodina_tunicata              N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................TCATTGTTTGCCNTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGACCCCTTTTGG-CGCCAGTTGACTTGACT--GGGCGGGTCCA--TACCAGCCGGATTCACCTTG--CCTTGT----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTC---AACTC-ACT--TTAAGC-AG--TCATTTCTGAAGG---CAGA-T-CTATTGGCTGGC-TTT-GCTGGCTGTAGACTG--ATCAATAAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAT-GTTCCCTA----TTTTTG---CTGGGCTTGTTTCTTGTTCTTACAAGTGATGTTTCCTATTTATTTAATATTTATAGGAAACAGATCTTATTTTGATGAGGGATATTTCCTGTCCTT-ATAGGGAACGCAGGTTGG-ATC--TGG-TTG-TCCGG-ACTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CGCGCTCTGGGAACTGCTTTCCTT-------------TTTAA-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCAA-CTACGCTTCC.............................................-------------------N
		Trebouxia_pb_Physcia_tenella                N----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-ANTC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_semipinnata            N----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTACCCACACCGCGAACC-ATTNA-TGTCCT-CTCAATTTACCCAGCAGGGTGCCGCGNTANNTGCTGTTAATGGCATTGCCNAAAANGGGGTCCACGATACGTGCTGTAGCATTGCGGCTAAAGGGGCCCACGATACGTGCTACAGCATTGAGT------------------------------------TTAAAGGGGCCCGCGATACGTGCCTAGGCATTGAGTTTAAAGGGTAAACTGCTGGTGAGAGCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGT-AGTTGACTTGGCT--GGGCGGGTCCAA-TACCAATTGGGTTCCTCTTG--GCCTT-----------------------------TGGCTA-A-GAGG-C-TACTCAGCTGTG--AGGGGTGACT--TTAC-C-AACTA------TTAAGC-T---TTATTTCTGAAGA---CAGG---CTGTTAGCTGGC-TT--GCTGGCTGCAGACTG--AATTAACAA-A-AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCTAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCAA-TTACCTT----------------GTGATG--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TGTTCCGATCAGGTTACCGGTCAGCTG--AAAAACATT--CGCGCTGTGGAAGTCGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGTTCTGGCTTTCATGAT-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAG-----------N
		Trebouxia_pb_Phaeophyscia_orbicularis       N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............................................TGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-G..........---------------------N
		Trebouxia_pb_Dimelaena_oreina               N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCA---ATAACTTTGGCT-TAAGATATAGTCG-TCC-CTGCTGAAA-AGCAG-CCCATAAGAGGA-TTTCCCTTTGGGGAAG------------------------GAGAGCTTATAGG-GATCTAAGTAGTACTCCTCAGAGCAATCTGTTGGAGGGCTGTAAAAA----------GCC--TTTAGATTGGAACA-AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAGCTCTTGAAAGGGAGTTTGCCGATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCCGCAGCTCTTTGGCTGTCGGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---ATTTTTCTGAAGG---CAGA---CTGCTGGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCCTT----------------ATGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATGGCTCCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Buellia_zoharyi                TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAACTACTTA-TGCCCT-TCTGGAACCGGCAAACTTTATTGTTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CACCAGCCGGACTCACCTTG--CCTTT-----------------------------GGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACCC-ACTT-TTAAGC-AA--TCAAATCTGAAGT---CAGA-T-CTACAGGCTGGC-TTTTGCCGGCTGTGGACTG--GATAAATAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTTGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-GTTCCCTA----TGTACA---TAGGGGAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGAGCCGCTTTCCTT--------------CCGA-GGAGAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAAGCTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_pb_Buellia_georgei                N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............................ACTTA-TGCCCT-TCTGGAGTAGGCAAGCTTCATTGTTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGACCCCTTTTGG-CGCCAGTTGACTTGACT--GGGCGGGTCCAA-TACCAGCCGGATTCACCTTG--CCTTGT----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTC---AACTC-ACT--TTAAGC-AG--TCATTTCTGAAGG---CAGA-T-CTATTGGCTGGC-TTT-GCTGGCTGTAGACTG--ATCAATAAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAT-GTTCCCTA----TTTTTG---CTGGGCTTGTTTCTTGTTCTTACAAGTGATGTTTCCTATTTATTTAATATTTATAGGAAACAGATCTTATTTTGATGAGGGATATTTCCTGTCCTT-ATAGGGAACGCAGGTTGG-ATC--TGG-TTG-TCCGG-ACTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CGCGCTCTGGGAACTGCTTTCCTT-------------TTTAA-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCNN-CTACGCTTCCCAGCAT-GCGCTGTGCA--GGACGCC-TTTT-GGCNNACGACC-TGA-----------------N
		Trebouxia_pb_Buellia_elegans                TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAACTACTTA-TGCCCT-TCTGGAACAGGCAAACTTTATTGTTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-TACCAGCCGGATTCACCTTG--CCTTCT----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACT--TTAAGC-AA--TCAATTCTGAAGG---CAGA-T-CTATAGGCTGGC-TAT-GCTGGCTGTAGTCTG--ATTAAATAT---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TACACA---TAGGGGAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTTAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGGGCTGCTTTCCTT--------------CCGA-GGAGAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGTTAAGCTTTCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_pb_Anaptychia_runcinata           N----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAACTACTAA-AGCCCT-TCTGGAGTAGGCAGGCTTCACAGCCTGCCCTTCAGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-AGTTAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACC--GGGCGGGTCCAA-TACCATCCGGATTCATCTTG--CCTTTA----------------------------TGGCTT-G-GGGT-T-CTGCCGGATGTG--AGGGGTGGCG--GTT----AACAC-ACG--TCAAGC-AA--TCAACTCTGAAGA---CAGA-T-CTACTAGCTGGC-TTT-GCTGGCTGTAGGCTG--AATAACTAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-CTTTCCTA----TCGCAGGA-TAGGGAAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATA--TGG-CCG-TCCGG-TCTGCCCTTCGGGTTGCCGGTCAGCTG--AAATACATT--CACGCTGTGGGAGCTGCTTTCCTT--------------TCGA-GGGAAGGCGAGTTTCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAAGCTTCCCAATTA-TGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAG----------------N
		Trebouxia_pb_Amandinea_puntata              TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAACTACTAA-AGCCCT-TCTGGAGTAGGCAGGCTTCACAGCCTGCCCTTCAGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-AGTTAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACC--GGGCGGGTCCAA-TACCATCCGGATTCATCTTG--CCTTTA----------------------------TGGCTT-G-GGGT-T-CTGCCGGATGTG--AGGGGTGGCG--GTT----AACAC-ACG--TCAAGC-AA--TCAACTCTGAAGA---CAGA-T-CTACTAGCTGGC-TTT-GCTGGCTGTAGGCTG--AATAACTAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-CTTTCCTA----TCGCAGGA-TAGGGAAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATA--TGG-CCG-TCCGG-TCTGCCCTTCGGGTTGCCGGTCAGCTG--AAATACATT--CACGCTGTGGGAGCTGCTTTCCTT--------------TCGA-GGGAAGGCGAGTTTCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAAGCTTCCCCATTA-TGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_pb_Physconia_perisidiosa          TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAGCTCCTGAAAGGGAGTTTGCCGATTGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCCGCAGCTCTTTGGCTGTCGGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGTA-A-AACTC------TTAAGC-A---ATTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--GATTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCTAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCCTT----------------GTGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGATTAGGTTGCCGGTCAGTTG--AAAAACATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATGGTTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_stellaris_Ps2          N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........................................TTCTGAAAGGCAGCTCTTGAAAGGGAATGTGCNGATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCNGCAGCTCTTTGGCTGTCGGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGG---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---CGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCCTT----------------ATGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATGGTTCCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_stellaris_Ps1          N-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCAAGTTGTTTGAGGGCCTTGTGCCTCCAAAGTTGG-CTG-----------AAACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTGA-TGCCCT-TTCTGAAAGGCAGCTCCTGAAAGGGAGTTTGCNGATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCCGCAGCTCTTTGGCTGTCGGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--AATAAATTA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCNTN----------------ATGGAA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGANTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGACTT-GGTAGGTGACCTTTGCCGGTTGCATGCNTTCGTTGCTCGCAATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACA--N
		Trebouxia_pb_Physcia_aipolia_Pa1            N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACG-AGGTGAAC-TGCGGAAGGATCATTG-AGTC-AGTCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAGCTCCTGAAAGGGAGTTTGCCGATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-AA--TTTTTTCTGAAGG---CAGA---CTGTTGGCTGGC-TT--GCTGGCTGCAGACTG--AATTAATAA---CGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGCNGCCTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAACCAA-TTCCCAT----------------GTGGCA--------------------------------------------------------------------------------------------------ATTGATTGG-AGC--TGG-CTT-TCCGG-TGTTCCGATTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATGGCTTCCATGAA-AGCGTGTGCA--GGACGCT-TTTT-GGCTTTC....---------------------N
		Trebouxia_pb_Physcia_aipolia_Pa2            N----ACAAGGTTTCCGT-AGG--TACT---TCACTATGCGGACAAAAGCAGGCTTGAAAAGAGTTTCCTGCTAGTGCTTTGCTTTAC-------TGCAAAGT-GCGA-CACTGTCAAATTGCCTGGAAA-TCCTGG---TAAGCCCCTGAT-ACCG-C-TCACTA-GAA-GAAA-TTCTGGTGTT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGG-A------TAAGGACAA-TAGGCA-GCCAACTG-CTAAAGGA--CTCAAG--------------TTCC-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCAGTGGGT-TAAAGTTGAAGGCTATGC--------------ATACAACTTTGGCT-TAAGATATAGTCGGTCC-CTGCTGAAA-GGCAG-CCTGTGAGAGGA-TTTCCCTTTNTGGAAG------------------------GAGAGCTTACAGG-AATCTAAGTAGTACTCTGCAGAGCAATCTGTGAGAGGGCAACAACAA----------GCC--TTTAGATTGGAATG-AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCAACTCTTAAAAAGGAGTTTGCCGGTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TACCAGTTGGGTTCCTCTTG--CTT-------------------------------TGGCTT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-AA--TTT--CCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATCCA-TTCCCTT----------------GTGGAA--------------------------------------------------------------------------------------------------ATTGGTTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAATATT--CGCGCTGTGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCAATAGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_adscendens_4           TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCTCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGANGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_adscendens_3           N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATCTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGT-AGGTGAACCTGCGGANGGATCATTG-AATC-TATCGTGCTCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGGTTCCTCTTG-CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAAAA-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCCTT---------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCA-GCAAGAACACCC
		Trebouxia_pb_Physcia_adscendens_2           N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........GTGCTCACACCGTGAACC-ATTTA-TGCC-T-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTNAGGCTTCGGC-AAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGNNGCTTTCCCT-----------TCAAAAA-GGAAAGCNGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Physcia_adscendens_1           TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCTCACACCGTGAACC-ATTTA-TGCCCT-TTCTGAAAGGCTGCTCCTGAAAGGGAGGTTACCCTTTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGCAGCTCTTTGGCTGTCAGTTGACTTGGCT--GGGCGGGTCCAA-TATCAGTTGGGTTCCTCTTG--CCT-------------------------------TGGCCT---GAGG---TTCCTGGCTGTG--AGGGGTGGCT--TGAA-A-AACTC------TTAAGC-A---TTTTTTCTGAAGA---CAGA---CTGCTAGCTGGC-TT--GCTGGCTGCAGACTG--ATTTAATAA---TGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGGCTCAGCGTC-GGCTTACTACCC--TCAATGAA-TTCCCTT----------------GTGGAC--------------------------------------------------------------------------------------------------ACTGATTGG-AGC--TGG-CTT-TCCGG-TTTTCCGACTAGGTTGCCGGTCAGCTG--AAAAACATT--CGCGCTATGGGAGCTGCTTTCCCT-----------TCAAAAA-GGAAAGCCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCCATGGCTTCCATGAA-AGCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGCTCAGGCAAGAACACCC
		Trebouxia_pb_Anaptychia_ciliaris            TCGTAACAAGGTTTCCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAAAATACTTA-TGCCCT-TCTGGGGTCAGCAAGCTTTACTGTTTGCTCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CACCAGCCGGATTCACCTTG--TCTC------------------------------TGGCAA-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACT--TTAAGC-AA--TTAATTCTGAAGA---CAGA-C-CTACTGGCTGGC-ATT-GCTGGCTGTAGGCTG--AAAACCATA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TCATTGA--TAGGGGAT--------------------------------------------------------------------------------------------------GCCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGGGCTGCTTTCCTC-GAAAGGCTA-CTTTCGA-GGGGAGGTGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAAGCTTCCCAGTAG-TCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAG-CAAGAC----N
		Trebouxia_fm_Neofuscelia_pulla              TCGTAACAAGGTTTCCGT-AGGT-ACTTTATTCACTATGCGGACAAAAGCAGGCCTGAAAAGGGTTCCCTGCTAGTGCTT-GCCTT-TCC-AGC--AGTCAAGCGCGA-CATCGTCAAATTGCCTGAAAG-TCCTGC---TAAGCCTCTGAT-ACCG-C-ACTGCA-AGG-GAAA-CCTTG-TCTTTG-CA-CTCCGGT-GAAA--GTCGGGG-GTA-TGGT-AAAA-ATTCAGTTGGA------TAGGGATAA-TGGGCA-GCCAAGTG-CTAAAGGAA-ATTAC----------------TTCCCATGCATGCAGT-TCA-CAGACTAAA-TGGCGATGGGT-TGAAATGGTGATCACTA----------TTGATTG--CCTTTTGGCT-TAAGATATAGTCGGTCC-TCGCTGAAAAGGCGA-CCTGTGGGAGGA-TTTCCCTTTCGGGAAG------------------------GAGAGCTTACAGGAGTTTAGATAATACTCTTCATTGTAAAATGTTAGAGGGCTTGACC-AGTGGTTTTT--GCCTCTAAACTGGATTA---AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCCACACCGCGAACTTACTTA-TGCCCT-TCTGGAACAGGCAGACTTTGTTGTTTGCCCTTCAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-GGTCAGGGGTTGGCTCCTTTTGG-TGTCAGTTCACTTGACT--GGGCGGGTCCAA-CACCAGCCGGATTCACCTTG--CCTTCT----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTT---AACTC-ACA--TTAAGC-AA--TCAATTCTGAAGG---CAGA-T-CTACTGGCTGGC-TTT-GTTGGCTATAGACTG--ATTAAATAC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-GTTTCCTA----TTACTA---TAGGGGAT--------------------------------------------------------------------------------------------------GCCGGTTGG-ATC--TGG-CTG-TCCGG-CTTTCCTTTCAGGTTGCCGGTCAGCTG--AAATACATT--CACGCTCTGGGGGCTGCTTTCCTT--------------TCGA-GGAAAGGCGGGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTACATGCCTTCGTTGCCCGCTAAGACTCCCAGTAA-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCA--------N
		Trebouxia_fm_Parmotrema_tinctorum           TCGTAACAAGGTTTCCGT-AGGT-TATGT--TCACTATGCGGATAAAAGCAGGCCTTAAA-GGGTTTCCTGCTAGTGCATTGTT---GCAA-----AGCAGTGTGCAA-CATCGTCAAATTGCCCGAAAA-TTCTGA---TACGCCCCTGAT-ACCG-C-ATATGCAAGG-GAAA-CATTGCTGTT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ATTCAGTGGGA------TAGGAACAA-TGGGCA-GCCAACTG-CTAAAGGGG-AT-------------------TCC-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCRRTGGGT-TGAATAGGCNAAGTCATTTTCAGGATTT-----GCCCATTCAGCT--TAAGATATAGTCGGTCC-TTGCCGAAA-GGCAA-CCTATGAGAGGA-TAGCTGAATTTGAGTTT-----------------------GAGAGCTCATAGGATTCTGGGTAATACTCTACATTGCAAAATGTTAGAGGGCAAAAAATA-----------GCCTCCAGAAATGGGTTA--TACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCCAACACCGCGAACTTACTTA-TGCCCT-CCTGTTATAGGCATGCTCAAAAGGCGTGCCTAGATGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-AGGCAGGGGCAGGCATCTTATGG-TGTCAGTTAGCCTGNCT--GGGCGGGTCCAA-CACCAATC-GGGGCCTTTTG--CCTTTCA---------------------------GGCAAA-G-GGAC-T-CGCTCGGTTGTG--AGGGGTGGCT--GTTT-A-ACTTA-C----TTCCAA-TCA-ATTTTTCTGAAGA---CAGT-T-CTACTGGCTGGC-TTT-GCCGGCTGTAGTCTG--ACTAACTAT---GGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCNGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGC-AAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-ATT-TCATTGG-TTCT---CCAATGCAAA--------------------------------------------------------------------------------------------------GGCAGTTGG-AAC--TGG-CCG-TCCGG-TTTGCCCGTTGGGTAGCCGGTCAGCTG--AAATACAAT--CACGCTTGGTGGGCTCCTTTCCAT----------------TC-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGCTAT-GCCTATCATCG-GCCGTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCAAGAACACCC
		Trebouxia_usneae                            TCGTAACAAGGTTTCCGT-GGTT-T-------AACTATGCGGACAACAGCAGGCTGAAAAAGAGTTTCCTGCTAGTGCCTTTC----TATCACT---GAAGGGTGCGA-CACTGTCAAATTGCTTGAAAA-TCCTGT---TAAGTCCCTGGT-ACCG-C-TCACTCTGAG-GAAA-TTCGGGTGTT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAGA-ATCCAGTGGGA------TAGGGACAA-TAGGCA-GCCAACTG-CTAAAAGGG-TCTAGCAC-------------TCT-CATGCAGGCAGT-CCA-CAGACTAAA-TGGCAGTGGGT-TGAAAGGGATTCATGCTACTATGAT--------TCCCCTTTGGCT--TAAGATATAGTCGGTCC-TCGCCGGAA-GGCNG-CTTATGAGAGGA-ATTCTCTTGTAGAGG-------------------------GAGAGCTCATAGGCACTTGGGTAATACTCTGCAGCGCAAGCTGTATGAGGGCAATGAAAT-----------GCCTCCCAAGTTGGAAGC--AACG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTNCCAACACCG...ACTTACTGA-TGCCCT-CTTGCTAAAGACAGTCTTCCAACAAAAGACTTGTCTTGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTA-GGTCAGGGGCCGGCATCTTATGG-TGTCGGTTAGCCTGACT--GGGCGGGTCCAA-TACCAATCCGGGGCCCTTTA--CCTTACA---------------------------GGTGAA-G-GGAC-T-GCCTGGGTTGTG--AGGGGTGGCT--GTTT-A-ACCCA-C----TTGCAA-TCA-ATTCTTCTGAAGC---CAGT-G-CTGCTGGCTGGT-TAT-GCCGGCTGTAGCCTG--ATCAACTAA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-ATTTTCATTGG-AACT---CCAGTGGGAA--------------------------------------------------------------------------------------------------CGCAGTTGG-AAC--TGG-CCG-TCCGG-TTGACC-TTTGGGTTGCCGGTCAGCTG--AAATACAAT--CACGCTTTGTGGGCTCCTTTCCAA----------------CT-GGGAAGGCGAGTTCCGATTT-GGTAGGTGACTTTTGCCGGTTGCATGCCTTCGTTGCTCGC...-GCCTTTCATCG-GCCGTGTGTA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGCA--------N
		Trebouxia_jamesii_86.156C3                  N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCAAACACCGAGAACCTACTTA-TGCCCT-CTCACAAGCGGCAGCTCCCTTCAAGGAGCTGCCTTTGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-CATCAATTGGGGCCTTTCTG--TCTTTT----------------------------AGGCGG-T-GAGG-T-CTACCGGTTGTG--AGGGGTGGCT--TTCA-A-CAACC------TCAAAT-TT--TGTTTTCTGAAGA---CAGG-T-CTTCTGGCTGGC-TTT-GCCGGCTGTGAACTG--AATAACTAA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-ATT-TCTTCGG-TTGATT--CCGAAGAAA--------------------------------------------------------------------------------------------------GGCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCGTTTGGGTTGCTGGTCAGCTG--AAATACATT--CACGCTTTGAGAGCTGCTTTCCTT-------------TCCGA-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAT-GCTCTCAATT--GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGGAAGAACACCCG
		Trebouxia_jamesii_86.132E1                  TCGTAACAAGGNTTCCGT-AGGT-ATAT---TCACTATGCGGATAATAGCAGGCCTGAAAAGGGTTCCCTGCTAGTGCTTTGCTCC-ATTG-----GGTAAAGTGCGA-CACCATCAAATTGCCTGGAAA-TCCCGA---TAAGCCTCTGAT-ACCG-C-ACAGC--GAGAGAAA-CTCTGTTGAT-G-CA-CCTCGGT-GAAA--GTCGAGG-GTA-TGGT-AAAA-ACTCAGCAGGA------TAGGGACAA-TGGGCA-GCCAAGT--CTAAAGGAG-TTCGC----------------TCC-CATGCATGCAGT-TCA-CAGACTAAA-TGTTGGTGGGT-TGGAAGGGCTTTCACTTGA---------------GTCCTTTCGGCT-TAAGATATAGTCGGACC-CCGCTGAAA-GGC-G-TCTGCGAGAGGA-ATTCTGG-TTAACAGAAG----------------------GAGAGCTCGCAGGATGCTCTAGGTAAGTACTCTGCAATGCAAATTGTTTAGAGGGCAAAATAT--------GCCTCTGAGCAGGGAAA---ATCG-AGGTGAACCTGCGGAAGGATCATTG-AATC-TATCGTGCAAACACCGAGAACCTACTTA-TGCCCT-CTCACAAGCGGTAGCTCCCCTTGGGGAGTTGCCTTTGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-TATCAATTGGGGCCTGTCTG--CCTTTT----------------------------AGGCGG-T-CAGG-T-CTACCGGTTGTG--AGGGGTGGCT--TTCA-A-CAACC------TCAAAA-C---TATTTTCTGAAGA---CAGT-T-CTACTGGCTGGC-TTT-GTCGGCTGTAGACTG--AATAACTAA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-ATT-TCATTGG-TGAACT--CCGATGAAA--------------------------------------------------------------------------------------------------GGCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTTGGGTTGCCGGTCAGCTG--AAATACATT--CACGCTTTGAGAGCTGCTTTCCTT---------------TCC-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAT-GCTCTCAATT--GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTCAGG----------N
		Trebouxia_jamesii_M97.017A2                 N-------------------------------------------------------------------------------------------------N----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATC-TATCGTGTAAACACCGAGAACCTACTTA-TGCCCT-CTCACAAGCGGCAGTTCCCCTTGAGGAGTCTCCTTTGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCAGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTTGACT--GGGCGGGTCCAA-TATCAATTGGGGCCTTTCTG--CCTTTT----------------------------GGGCGG-T-CAGG-T-CTACCGGTTGTG--AGGGGTGGCT--TTCA-A-CAATC------TCAAAA-G---TATTTTCTGAAGA---CAGT-T-CTACTGGCTGGC-TTC-GCCGGCTGTAGACTG--AATAACTAA---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCTAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACTAA-ATT-TCATTGG-TGAACT--CCGATGAAA--------------------------------------------------------------------------------------------------GGCAGTTGG-ATC--TGG-CCG-TCCGG-TTTGCCTTTTGGGTTGCCGGTCAGCTG--AAATACATT--CACGCTTTAAGAGCTGCTTTCCCT---------------TCG-GGAAAGGCGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCCCGCTAT-GCTCTCAACT--GCGCTGTGCA--GGACGCC-TTTT-GGCTT.......--------------------N
		Trebouxia_incrustata                        N-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTG-AATC-TATCGTGCCCACACCGCGAAATTACTTA-TGCCCT-TCTGGAGTAGGCAAGCTTGCTAGTTTGCCCTTCAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCA-GGTCGGGGGCTGGCTCCTTTTGG-TGTCAGTTGACTCGACT--GGGCGGGTCCAA-TACCAGCCGGATTCCTCACG--CCTCT-----------------------------AGGCTT-G-GGGT-T-CTGCCGGCTGTG--AGGGGTGGCT--GTTC---AACTC-ACT--CCAAGC-AA--TCAACTCTGAAGG---CAGA-T-CTATAGGCTGGC-TTT-GCTGGCTATAGACTG--ATCAATATC---AGA-CAACTCTCAACAACGGATATCTTGGCTCCCGTAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAACCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCCTCGGCCAAGAGCATGTCTGCCTCAGCGTC-GGCT-ACTACCC--TCAACCAA-CTTTCCTA----TTTTGA---TNGGGGATGTTTCTTGTCCTTAAAGGGGAAGTTTCCTATTTTATAGGAGATTTTT----------CTCGTTTTGACAGGAAATATTTCCTGTTCTTTATGGGGGAGGCCGGTTGG-ATC--TGG-CCG-TCCGG-ATTGCCTTTCAGGCTGCCGGTTGGCTG--AAATACATT--CACGCTCTGGGGGTTGCTTTCCTT--------------TCAA-GGAGAGACGAGTTCCGATTT-GGTAGGTGACCTTTGCCGGTTGCATGCCTTCGTTGCTCGTTANGCTTCCCAGTAT-GCGTTGTGCA--GGACGCC-TTTT-GGCTTTCGACC-TGAGGTC-------------N
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 1675 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 EXSET * ITS_analysis = 1 - 630 635 642 680 - 861 867 909 910 923 944 - 979 986 - 988 993 - 995 1008 1009 1020 1021 1026 1028 1034 - 1039 1046 - 1050 1064 - 1066 1071 - 1073 1086 1089 1090 1106 1107 1117 - 1278 1291 1292 1301 1309 - 1324 1331 - 1428 1438 1441 1442 1443 1447 1451 1457 1485 1486 1496 1497 1522 - 1540 1561 1617 1628 1629 1637 1641 - 1675 ; 
 END;