NEXUS [File created by TreeBASE: 7/26/07 20:58:49] [Matrix accession#: M892] BEGIN TAXA; TITLE M892; DIMENSIONS NTAX=20; TAXLABELS Biscogniauxia_atropunctata_ATCC13359A Biscogniauxia_atropunctata_var_intermedia_GB4796 Biscogniauxia_marginata_ATCC62608 Biscogniauxia_mediterranea_CBS28061 Biscogniauxia_mediterranea_GB5664 Biscogniauxia_mediterranea_JC4 Biscogniauxia_mediterranea_JC55 Biscogniauxia_nummularia_CBS96960 Biscogniauxia_repanda_ATCC62606 Camillea_tinctor_C83C Hypoxylon_annulatum_GB5659 Hypoxylon_cinnabarinum_F108404 Hypoxylon_fragiforme_CBS20631 Hypoxylon_fuscum_F076920 Hypoxylon_fuscum_h16 Hypoxylon_intermedium_h4a Hypoxylon_ochraceum_F108406 Hypoxylon_perforatum_F108408 Hypoxylon_rickii_F108408 Hypoxylon_cohaerens_ATCC38977 ; END; BEGIN CHARACTERS; TITLE M892; DIMENSIONS NCHAR=626; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Biscogniauxia_atropunctata_ATCC13359A GCGAGTTAATTAC-AAA---CTCCAAA-CCC--ATGTGAAC-ATACCTACTGTTGCCT-CGGCAGGC-------------C-----GTGCTGCGCGGCT----------GGATCGCCTCCCC-CGCGTGGGCAGCTACCCT---GGAGT----AGCTACCCTGTAGC--GGGAGCGGCCCGCCCCGCGGCGCGCCA-----A-CA--GGCC-TGCCGAA-GGACCCCT---AAACTCT-GTTTC-GCAC-CTGTATCTCTGAGTTTATTA--TAC--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCCCTAT-TTGCTTGACGTTGGGAGTTTACGGAGAC-----GTAATTCCTCAAATATAGTGGCGGAGCTGGGTCGTGCTCTAAGCGTAGTAACC-AA--ATTCTCGCTTCTGA---GGC--CGGCCCGGGTCCT-GCCGTAAAACCCC----C-TATAT-TTTTTTTCT Biscogniauxia_atropunctata_var_intermedia_GB4796 GCGAGTTAATTAT-AAA---CTCCAAA-CCC--ATGTGAAC-GTACCTACTGTTGCCTTCGGCAGGT-------------C-----GTGGTGCGCGGCG----------GGATCGCCAACCG-GCGGCGGGCAGCTACCCT---GGAGTGGGCAGCTACCCCGCGGCCGGGAGGCGGCCTGCCCCGCGCCACGCTA-----AACA--GGCC-TGCCGGA-GGACCACT---AAACTCT-GTTTTTACGC-CTGTATCTCTGAGTTTGCTA--TAC--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAACAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCA-TCAAGCCCTATCTTGCTTGACGTTGGGAGATTACGGAGAC-----GTAACTCCTTAAATATAGTGGCGGAGCTGGGTCGTGCTCTAAGCGTAGTAACT-TACAATTCTCGCTTCTGA---GGG--CGGCCCGGGTCTT-GCCGTAAAACCCC----CCTATAT-TTTATCACT Biscogniauxia_marginata_ATCC62608 GCGAGTTACTGGA-AAA---CTCCAAA-CCC--CTGTGAAT-ATACCTATTGTTGCCT-CGGCAGGC-------------T-----GTGCTGTCTGGTAG---------CTCCTACCCT-----------GTAGTTACCCT---GTAGC----T---------------GGTGGCTGCT-ACCCCGCAGCACGTTG-----TAA---GGCC-TGCCGGA-GGACCTCT---AAACTCT-GAAT--ATTA-CTGTATGTCTGAGTCTATTT--GAG--AAATTGAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGCAGTACTCTGCTGGGCATGCCTGTTCGAGCGTCATTTCGACCA-TCAAGCCCTG-TATGCTTGACGTTGGGAATTTACAGTGCT-----GTAATTCCTTAAATCCAGTGGCGGAGCCGGGTCATGCTCTAGGCGTAGTAATT--ATA-TCCTCGCCTCTGT---AGC--TGTCCCTTATCCT-GCCGTAAAGCCCA----CTAAATTATAACT---- Biscogniauxia_mediterranea_CBS28061 GCGAGTTAATCAT-AAA---CTCCAAAACCC--CTGTGAAC-TTACCTA-TGTTGCCT-CGGCAGGT-------------C-----GTGGTGTGTAGCGG---------TGACCACT-----------------------------------------------------GGGTCG-CTTGCCTCGCACCACGCTG-----AAAA--GACC-TGTCAAA-GGACCCCT---AAACTCT-GTTTTTACAA-CTGTATCTCTGAGTCTATTA--TAC--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCCCTA-TTTGCTTGACGTTGGGAGTTTACGGAGAC-----GTAATTCCTCAAATATAGTGGCGGAGCTAGGTCGTGCTCTAAGCGTAGTAACC--ACAATTCTCGCTTCTGC---AGC--CGGCTTAGGTCCT-GCCGTAAAACCCC----TATATTT---TTTTATT Biscogniauxia_mediterranea_GB5664 GCGAGTTAATCAT-AAA---CTCCAAAACCC--CTGTGAAC-TTACCTA-TGTTGCCT-CGGCAGGT-------------C-----GTGGTGTGTAGCGG---------TGACCACT-----------------------------------------------------GGGTCG-CTTGCCTCGCACCACGCTG-----AAAA--GACC-TGTCAAA-GGACCCCT---AAACTCT-GTTTTTACAA-CTGTATCTCTGAGTCTATTA--TAC--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCCCTA-TTTGCTTGACGTTGGGAGTTTACGGAGAC-----GTAATTCCTCAAATATAGTGGCGGAGCTAGGTCGTGCTCTAAGCGTAGTAACC--ACAATTCTCGCTTCTGC---AGC--CGGCCTAGGTCTT-GCCGTAAAACCCC----TATATTTTTTTT--ATT Biscogniauxia_mediterranea_JC4 GCGAGTTAATTAC-AAA---CTCCAAAACCC--CTGTGAAC-TTACCTA-TGTTGCCT-TGGCAGGT-------------C-----GTGGTGTGTAGCG----------TGATCACTA------------------------------TA-------------------GAGGATCACC-GCCTCGCACCACGCTG-----AAA---GACC-TGTCAAA-GGACCCCT---AAACTCT-GTCTT-ACAA-CTGTATCTCTGAGTCTATTA--TAT--AAAC-AAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCCCTAATCTGCTTGACGTTGGGAGTTTACGGAGAC-----GTAATTCCTCAAATATAGTGGCGGAGCTAGGTCGTGCTCTAAGCGTAGTAACC--ACA-CTCTCGCTTCTGC---AGC--CGGCCTAGGTCTT-GCCGTAAAACCCC----TATATTTATTTTTTACT Biscogniauxia_mediterranea_JC55 GCGAGTTAATTAC-AAA---CTCCAAAACCC--CTGTGAAC-TTACCTA-TGTTGCCT-TGGCAGGT-------------C-----GTGGTGTGTAGCG----------TGATCGCTA------------------------------TA-------------------AGGGATCACC-GCCTCGCACCACGCTG-----AAA---GACC-TGTCAAA-GGACCCCT---AAACTCT-GTCTT-ACAA-CTGTATCTCTGAGTCTATTA--TAT--AAAC-AAGTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTGATAGTATTCTGTCAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCCCTAATCTGCTTGACGTTGGGAGTTTACGGAGAC-----GTAATTCCTCAAATATAGTGGCGGAGCTAGGTCGTGCTCTAAGCGTAGTAACC--ACA-CTCTCGCTTCTGC---AGC--CGGCCTAGGTCTT-GCCGTAAAACCCC----TATATTTATTTTTTACT Biscogniauxia_nummularia_CBS96960 GCGAGTTAA--AC-AAA---CTCCAAA-CCC--ATGTGAAC-ATACCTACTGTTGCCT-CGGCAGGT-------------C-----GTGCTGTGCGGTGG---------TGATACCTACCCT-GGAGTAGGAACCTACCCT---GTAGTGACC----TACCCTGGAGTGGAG------CTACCCTGCAGCACGC-A-----ACCA--GGCC-TGCCAAA-GGACCCCT---AAACTCT-GTT---ATAA-C-GTACCTCTGAGTCAACTA--TAC--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAATAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCC-CCAAGCGCTA-CTTGCTTGACGTTGGGAATTTACAGCTGCT----GTAATTCCTCAAATTTAGTGGCGGAGCTAGGTCATGCTCTGAGCGTAGTAATT---CTGTTCTCGCTCCTGA---AGC--TGCCCTATATCCT-GCCGTAAAACCCC----TAAATTATAATCT---- Biscogniauxia_repanda_ATCC62606 GCGAGTTGTT--A-AAA---CTCCAAAACCC--ATGTGAAC-ATACCGTCTGTTGCCT-CGGCAGGT-------------C-----GTGCCGCCGGGTGGTCTGC---CTACCCTGTAACAG-CTACCCGGTAGCTACCCTAGAGGAGCTACCCTGTAG-CAGTTACCCTGTAGGTGCT-ACCCTGCAGCACGC-A-----CCC---GGCC-TGTCGAA-GGTCCCCT---TAACTCT-GTTT----AATCTGTATCTCTGAGTCCTATG--TGG--AAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGACAGTATTCTGTCGGGCATGCCTGTTCGAGCGTCATTTCGACCA-TTAAGCCCTA-TTTGCTTAACGTTGGGAATTTACGCCCTG------TAATTCCTCAAAACCAGTGGCAGAGCTGGGTTATGCTCTAAGCGTAGTATTT--ATT-TCCTCGCTTCTGT---AGC--TAGCTTAGGTCCT-GCCGTAAAAACAG----TATATATCTAGT----- Camillea_tinctor_C83C GCGAGTTAATTACAAA----CTCCAAACCCA---TGTGAAC-TTACCTGCTGTTGCCT-CGGCAGGTTGCGCTGC----------GGAGTGCCTACCCTGGAGTGG-CCTACCCTGGAGTAG-CTACCCTGTAG-TGC----------CTACCCTGGAG--------------------TA---GGCACCCCGCA-GCGCGCAACCAGACC-TGCCAGA-GGACCTCT---GAACTCT-TTTTTACACT--GGAACTCTGA-AACTATTAT--AC--AAAC-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCTAACAGTATTCTGTTAGGCATGCCTGTTCGAGCGTCATTTCAACCCCC-AAGCCCTAT-TTGCTTGACGTTGGGAGTTTACGG---AAA--CGTAATTCCTCAAATATAGTGGCGGAGCTAGGTCGTGCTCTAAGCGTAGTAATT--ATA-TTCTCGCTTCTGC---AGCCGGT-CTAG--GTCTTGCCGTAAAGCCC---TATATTTTTCT-------- Hypoxylon_annulatum_GB5659 CCGAGTTAT--CA-CAA---CTCC-AA-CCCT-TTGTGAACCTTACCG-TCGTTTCCT-CGGCG-----------------------CACTGCTGTGGGA----------GGCTACC-----------CTGTAGCGG-----------T--------------------------TGTTTACCCTACAGGACGCAC-----CCTGCAGCGG-CGCCGAAAGGACTACC---AAAACTC--TTTTATCCA--AGTTACCTCGAACAATTTA-CTAT-ACAAT-AGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCAACCC-TTAAGCCC-T-GTTGCTTAGCGTTGGGAATCTGC-TAGCCTCGGCGCAGTTCCTTAAATTCATTGGCGGAGCTGTGGCACACTCTAGGCGTAGTAGTTTAACA--CCTCGCCTCTAG---AGT--GGCCGCGGTTACTGGCCGTAAAACCCC----TATATTTCTAGT----- Hypoxylon_cinnabarinum_F108404 TCGCACGCGGCAT-CCT---GCCC-AA-CCCTA-TGTGAAC-TTACCA-CTGTTGCCT-CGGCGGCG---------------CC----GCGGCTACCCGGGAG-----CTACCCTGTAACCGCCTACCCTGTAGGCGG----------CTACCCTGTAG-------------------CCACCCTGTAGCTCGCAC-----GCAA--GGCC-CGCCAGA-GGACC-CC---AAACTCTGAT-TATACCC--TACAACTCTGAATTAGCCA---AC-GTAAT-ACGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCACTAGCATTCTGGTGGGCATGCCTATTCGAGCGTCATTGCAACCCCTTAAGCCCTG--TAGCTTAGCGTTGGGGGACCACGTCTCAGCGACGTGGCCCCTGAAATGTAGTGGCGGAGTTGGTGAGCACTCTCAGCGTAGTAATT-----CTTCTCGCTTCGGG---GGTCTGCCGCTGGCTGCTGGCCGTAAAAAAACC--CTATACTCTTAGT----- Hypoxylon_fragiforme_CBS20631 GAGGAATACCCAA-AAC---CTCCCAACCCCT---GTGAAC-TTACCA-CTGTTTCCT-CGGCGTGCGCA-----------------CCTGGTTGCCCGCGGGGG---ATCCGAGCCTACCCTGTAGCTACCCTGTAG----------CTACCCTGTAGA-----------C-----CCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCC-CGCCGAA-GTACC-CT---GAACTCT-GTTT-AACGT--GGAAT-TCTGAATGCTTCA---AC-TAAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTG--TTGCTTAGCGTTGGGAGTCTACGGG-TTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTACAC--AATCTTTTTGTCTCGCTTTGGATATTGCCCCGCCTCCACGCCGTAAAACCCCCC-ATATCAAA---------- Hypoxylon_fuscum_F076920 CTGAGTTCTT-AC-AAA---CTCC-AA-CCCT-CTGTGAACCATACCA-TTGTTGCCT-CGGCGAGA-------------G-----CTGTGGCTGCCTGG---------TAGTTGTC-----------TTGTAGTTA-----------T------------------CTACTCGGCCCCTATCCTGTAGCA-TCAG-----CGTACAAGCT-CGCCGAA-GGACCGCT---AAACTCT--GTCTGACAG--TG-TATTCTGAATGCTTCAACTAA----AT-A-GTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCGACCC-TGAAGCCCTA-GTTGCTTCGCGTTGGGACTCTACTGG-CTGCCCTGTAGTTCCCTAATGACAGTGGCGGAGTTCAGGTGTACTCTCAGCGTAGTAATT----TCTTCTCGCTTTTGC---AGT--AGC-CTGGTCGCCGGCCGTAAAACCCCC---TATTTTCTAGT------ Hypoxylon_fuscum_h16 CTGAGTTCTTAC--AAA---CTCC-AA-CCCT-TTGTGAACCATACCAACTGTTGCCT-CGGCGTGA-------------G-----CTGCGGCTGCGTGGT---------AGCTACC-----------CGGTAGTCAC-C--------TACCC-----------------GG---TACCTACCCTGTAGCG-TCTG-----CGTATAAGCC-CGCCGAA-GGACCACT---AAACTCT--GTTTAACAG--TGTAT-TCTGAATGCTTCAACTAA---A---TAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCGACCC-TGAAGCCCTG-GTTGCTTCGCGTTGGGACTCTACTGG-CTACCCTGTAGTTCCCTAATGACAGTGGCGGAGTTCAGGTGTACTCTCAGCGTAGTAATTTCTT----CTCGCTTTTGC---AGT--AGC-CTGGTCACCAGCCGTAAAACCCCC---TATTTTCTAGT------ Hypoxylon_intermedium_h4a CTGAGTTCTTACC-AAA---CTCCTAA-CCCT-TTGTGAACCGTACTG-TCGTTGCCT-CGGCGTGA-------------G-----CTGCGGCTACCCGGT---------AGCTACC-----------CGGTAGTTTC-C--------TACCC-----------------GG---TAGCCACCCGGTAGC---TTG-----CTCA-AGGCC-CGCCGGT-GGACCGCC---CAACTCT--GTTTTATAG--TGTATCTCTGAATGCTTCAACTGA---AAT-CAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCAACCC-TTAAGCCCCT-GTTGCTTAGCGTTGGGATTCTACAGGGCTGTCCTGTAGTTCCCTAAAATCAGTGGCGGAGTGGGAGCTCACTCGTAGCGTAGTACTTTTTTT---CTCGCTTCGGT---AGT--GGCTCTGACTTTCGGCCGTAAAACCCCC---TATATTTTCAAA----- Hypoxylon_ochraceum_F108406 CTGAGTTATTAAA-AAA---CTCCCA--CCCT-TTGTGAATT-TACTC-TTGTTGCCT-CGGCGTTGGG-AAGC--ACCTACCCTGGAGGAGCTACCCTGGAGGAGACCTACCCTGGAGAAGATTACCCCTCAGTTGAGAG----GACCTACCCTGGAGAAGTTTTTTTCCACAGCACCTACCCTGGAGAT-GCAC-----TTTA--CACCACGCCGGT-GGACTTTA---TAACTCTGTTTTTTCCAC--TGAATCTCTGAAAAA-ATA---AC-TAAAT-CAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCAACCC-TTAAGCCCTG--TTGCTTAGTGTTGGGTATCTACCCTGTAAAAGAGTAGTTCCCTAAATGTAGTGGCGGTGTTT-AGGGCACTGGTAGCGTAGTAAATT--TATTTCTCGCCTCTAA---AGT--GCCCTAGAA-GCCTGCCGTAAAATTATAA-ATATCTTATATTTATATA Hypoxylon_perforatum_F108408 CTGAGTTCTACAA-AAC---TCCC-AA-CCCT-TTGTGAATTATACCT-TAGTTGCCT-CGGCGTCGAGCGAGTCAACCTACCC--G-GGAGCTACACTGGAGTC-ACCTACCCTGTAGAAC-CTACCCTGTAGACGG----------CTACCCTGGAG-------------------CTACCCTGTAGTT-GCAC-----TTT---CGCGTCGCCGGT-GGACTACC---AAACTCTTATATGTATAG--TGTATCTCTGAATTC-TTA---AC-AAAAT-TAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCAGTAGTATTCTACTGGGCATGCCTATTCGAGCGTCATTTCAACCC-TTACGCCCTG--TAGCGTAGTGTTAGGACTCTACTCTTTAGA-GAGCAGTTCCCTAAAACCAGTGGCAGTGTTC-TGTACACTCATAGCGTAGTAATT-----CTTCTCGCTTCTGC---AGT--GGCCCGTACTATTCGCCGTAAAACCCC---CTATTTTCTAAT------ Hypoxylon_rickii_F108408 GCGGCTTA------------CTGCCAAACCCTA-TGTGAAC-TTACCA-CTGTTGCCT-CGGCG-GCGC------------------CGCGGCTACCCTGGAGAG---CTACCCTGTAGCCATTTACCCTGTAGATGG----------CTACCCTGTAG-------------------CTACCCTGTAGCTCGCA----C--GTAAAGGCC-CGTCAAA-GGACC-CT---AAACTCT-ATTTTGACTT--GGTATCTCTGAGTAAATCA---AC-TTAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCAACCCCTTAAGCCCTG--TTGCTTAGCGTTGGGGGCCTGCGCC-TGGCGGCGTAGCCCCTGAAAGATAGTGGCGGAGTCAGTGAGCACTCTGAGCGTAGTA-----ACTTTTCTCGCTCCGGT---AGCTTGCCCCTGGCTGCTGGCCGTTAAACCCCCCCATATCTTCTAGT------ Hypoxylon_cohaerens_ATCC38977 GAGAGTAAAA-CA-AAA---CTCCAAAACCCT-TTGTGAACCTTACCT-TAGTTGCCT-CGGCGTGC-------------G-----CCGCGGCTACCCGG----------GAGGACCG----------CTGTAGGG---------------------------------------CGGTTACCCTGTAG---CCGG-----CCCACGGCC--CGCCGAA-GGACCACT---GAACTCT--TGTTTATCA--CATTGCATCTCTGATTTAAACTATTAAAAT-AAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTATTCGAGCGTCATTTCGACCA-TTAAGCCCCT-GTAGCTTAGCGTTGGGAGCCTACGTCCTCGCGGCGCAGCTCCTCAAAGTCAGTGGCGGAGTCGGGTCGTGCTCTGAGCGTAGTAGTT-AATA--TCTCGCTTCTGC---GGT--GCCCCCGGCTGCCTGCCGTAAAACCCCCCCCTATACTTTCGTATT--- ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 626 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;