NEXUS [File created by TreeBASE: 7/26/07 20:59:03] [Matrix accession#: M940] BEGIN TAXA; TITLE M940; DIMENSIONS NTAX=38; TAXLABELS Pandorina_morum_A138 Pandorina_morum_U857 Pandorina_morum_A154 Pandorina_morum_U879 Pandorina_colemaniae_U2578 Pandorina_morum_A128 Pandorina_morum_U881 Pandorina_morum_A118 Volvulina_boldii_U1761 Volvulina_boldii_U2186 Gonium_pectorale_Russ Yamagishiella_unicocca_U2428 Volvulina_steinii_U1525 Volvulina_steinii_Chile Volvulina_steinii_Arg Volvulina_steinii_U1531 Pandorina_morum_BARB Volvulina_pringsheimi Volvulina_compacta_NIES583 Volvulina_compacta_Nozaki Pandorina_morum_U1730 Paulschulzia_pseudovolvox_U165 Chlamydomonas_reinhardtii Pandorina_morum_Noz3923 Pandorina_morum_Kiev Pandorina_morum_U882 Pandorina_morum_U865 Pandorina_morum_CHILE Pandorina_morum_MONG Pandorina_morum_Mad Pandorina_morum_U2327 Pandorina_morum_A160 Pandorina_morum_U869 Pandorina_morum_U853 Pandorina_morum_U874 Pandorina_morum_U2328 Pandorina_morum_U871 Pandorina_morum_A164 ; END; BEGIN CHARACTERS; TITLE M940; DIMENSIONS NCHAR=811; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Pandorina_morum_A138 AATCTA--TCAA--ACAACACTTAT------TACGTGAACTACCTA---TGTTGGCTATGTACTGTACAGCTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTACATTA--CAT-GGCCG-----TTTTACTAACCCT--TACCAACACCAAAACCTTTAAACAATTAA------TAGAATGCATGGCTTAGAGCTGT--GCGTTCAA-CGAACAAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCACTAAATCACCATGTGT-----------ATGGTTGTGTGCGGATCTGACCGTCTCAGCTATGTGTTCT-------------ACATATGGCTGAGTTGGTTGAAGTGTGCAGCTGTT---AT--ACATGGTCCCGT---TATA-----TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTGC--AAATGCTTAAGTAGATGGCTTCTAGGGAC--CGTA------TTATGACACAGCAACAGGAAT--------------------------ATCACCTTTTATCC Pandorina_morum_U857 AATCTA--TCAA--ACAACACATAT------TACGTGAACTACTAA---TGTTGGCTATGAGCTGTACAGCTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTGCAGTA--CAT-GGCCG-----TTTTACTAACCCT--TACCAACACCAAAAACTTTAAACAATTAA------TCGAATGCATGGCTTAGAGCTGT--ACATTCAA-TGAACTAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCACTACATACACATGTGT-----------ATGGTTGTGTGCGGATCTGACCGTCTCAGCTATGTGTTCT-------------ACATATGGCTGAGTTGGTTGAAGTGTACAGCTGTT---AT--ACATGGACCCGT---TATA-----TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTGC--AAATGCTTTAGTAGATGGCTTCTAGGGAC--CGTA------ATATGACACAGCAACAGGAAT--------------------------ATAACCTTTTATCC Pandorina_morum_A154 AATCTA--TCAA--ACAACACAT--------TACGTGAACCATTCTA--TGTCGGCTGT---CTGGAGCATGTGTGT------------------------------AATGCATGTTCTCTAGAT-TGGAA---GGACTTTTAGTAGGATGTNTTACACATCCTGAATAAGTACTTCCAGGTGCTAAATGTACG-----------------------------------TCTGTACACTTTGGCATGGGCCCT----TTTTGCTAACCTTTACACCAACACACCAAAGTACATTTAAATACAA--CTGAGAGTGTATGGCTTAGAGCTGT--GCATTCGCCTTAACCAAT-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGGACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCTTCAGCGTCGGGTA-AAAATTCGTACACATATATATCCCTT--------GGTATATATGGATGCGGACCTGACTGTCTCAGCATGCATAC----------------ATGTGTGCTGGGTCAGTTGAAGTATGCAGCTGTC--AA---ACATGGACCCAT---TAAA-----TGGGCCTCTACTGGGTGGG-CAATGTTTA--TTGTTGCTACAAAGCTTTAGTAGATGGCTT--AGGACCCATGTAT-----ATACGACACAGCATCAGGAAA----------------------ACAAGACACCTTTTATCC Pandorina_morum_U879 AATCTT-ATCAA--ACCACACCT--------TATGTGAACTATTTAA--TGTTGGCCAT---CTGTATTTGT---------------------------------------AAAAGAATACAGAT-TGGAA--TGGGAATG-----------------------AAAATTCTCATTCCAGCTGTTAGAGTTGG-------------------------------------TTCTCCACTCTGGCATCGGCC-------TTTGCTAACCCT--TACCAACACCTAA--TTAATAATTAATTA---TTTTCGGATGCATGGCTTAGAGCTGT--GTATTCAA--AAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGGACGCAAAATGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCTCTCAACTATATGTTGTAATTAATATATAGTTGTTGGTGCGGACCTGACTGTCCCAGCAATTATATGTATTTATTTACATTTAAATATGCTGGGTTGGTTGAAGTGTACAGCTGTT--GGT--ACATGGACCCGC---TATA-----TGGGCCTCTACTGGGTAGG-CAATTAT----TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATCCGCGTG------TGCTAACACAAAG-CAGGAA--TACGTGCCTT---GTGCATG-TATAAATACACTTTTTCC Pandorina_colemaniae_U2578 AATCTA--TCAA--ACCACACTT--------TACGTGAACCATCTA---TGTTGGCCAT---CTGTGTGTGCCTAAG----------------------------------AAACACACATGGAT-TGGAT--TAGGGTCTGAGC------------------AATCGGACCTAATCCAGCTGTTGGATAGCTGCTGCTG-------------------------CAAACTACAGCTGTCTGGCATCGGC--------CTTGCCAACCC---TACCAACACCAAACATTAAACAAATCAATA-----ATGGATGCATGGCTTAGAGCTGT--GTGTTCAA--CAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCGCTCACAGTTA---------------------CACTGTGTGCGGACCTGACTGTCTCATCACAATC------------------ACTTGTGATGGGTCAGTTGAAGTGTGCAGCTGTT--GGT--ACATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAATCT-----TTGCTA----CATGCTTTAGTAGATGGCTT--AGGATCCTTGTG------TGCTGACACAAAG-CAGGAA--TA--TGCATCC--GTGCAT---ATCAAATCAC-TTTTCC Pandorina_morum_A128 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTACGCCTTC---------------------------------------GGGTGTACAGAT-TGGGC--TGTGTCCGATT-----------------AATTTTGGATGTAGCCCAG-CGTCTGCTCCTGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATGCATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCTTCAGCGTCGGGTA-AAAACTCACCCTAATATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------TGGGCTTCTACTGGGTAGG-CAATCTT----TTGCTA----TATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Pandorina_morum_U881 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTATACCTTT---------------------------------------GGGTGTACAGAT-TGGGC--TGTATCCAATT-----------------AATTTTGGGTGTAGCCCAGGCGTCAGCTCCAGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATACATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCACCCTAAAATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------CGGGCCTCTACTGGGTAGG-CAATTA-----TTGCTAC---CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Pandorina_morum_A118 AATCTA--TCAA--ACCACAC-----------CTGTGAACCATCTA---TGTTGGCCAT---CTGTACGCCTTC---------------------------------------GGGTGTACAGAT-TGGGC--TGTGTCCGATT-----------------AATTTTGGATGTAGCCCAGGCGTCAGCTCCTGCC---------------------------------TCTGGCTGGAGCCGGCTTCGGCC-------CTTACTAACCC---AACCAACACCAAACCAAATATCTAATACAAA----TCGAATGCATGGCTTAGAGCTGT--GAATTCAC---AACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAACTCACCCTAATATCCCTA--------------GGGATTCTAGTGTGGACCTGACCGTCTCAGCATGAG------------------CAATCATGCTGGGTTGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGACCCGC---TAA------CGGGCCTCTACTGGGTAGG-CAATCTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TATTGGCACAAAG-CAGGAA--TAC-TGGCTT---GTCCGG-----TACTCATCCTTTTTC Volvulina_boldii_U1761 AATCTA--TCAA--ACCACAC-----------ATGTGAACCAAAC----TGTTGGCCAT---CTTTGGGCTGTT-------------------------------------TACGGACCAAAGAT-TGGGT--TGGTACGGGAG-----------------AAATCCTGGATCAATTCAGGCGTTGGGCCCAACAATATA------------------------------TTGTTGAGCCTGGCTCCGGCCT-----AAATACTAACCC---TACTAACTCCAAAAAATAAATCTAACAAAA----TCTGGATTCACGGCTTAGAGTCGC--ACATCCAA--CAATAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTG-AAAACTCATGCGTGAAAACCCTGTCATATACAGGAAGTTTCCATAGCATGGACCTGACTGTCTCAGCATATT-------------------TTATATGCTGGGTCAGTTGAAGTTTGCAGTTGCT--GAT--ACATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATGTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGCG------TGTTGGCACGAAA-CATGAA--TAC-TGGATT----TCCAG---TAAATAAATCCTTTTTC Volvulina_boldii_U2186 AATCTA--TCAA--ACCACAC-----------ATGTGAACCATCT----TGTTGGCCAT---CTTTGGGCATACT----------------------------------------GCCCAAAGAT-TGGAT--TGGTACAGGAG-----------------AAATCCTGGACTAATTCAGGCGTTGGGCTCAACAATACA------------------------------TTGTTGGGCCTGGCTCCGGTCT-----AAATGCTAACCC---TACTAACTCCAAAATTTAAATCTAATAAAA----TCTGGATTCACGGCTTAGAGCCGT--ACATCCAA--CAACAAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTG-AAAACTCATGCGTGGAAACCCTGTTATA--CAGGAAGTTTCCATAGCATGGACCTGACTGTCTCAGCATATT-------------------TTATATGCTGGGTCAGTTGAAGTTTGCAGTTGCT--GAT--ACATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATTTT----TTGCTA----CATGCTTTAGTAGACGGCTT--AGGATCCTTGTG------TGTTGGCACGAAA-CAGGAA--TAC-TGGATT----GCCAG---TAAATAAATCCTTTTTC Gonium_pectorale_Russ AATCTA--TCACAATCCACAA-----------CCGTGAACCGTAC----TGTTGGCCT----CTCAATGGGCTT---------------------------------------GCCTGTTGAGGC-TAG---TTGTGAGCTTAGTTT-------------GCGCTTCGCTCATGGCTAGGTCGTGGCTAGGGCATTTT--------------------------------ATGCATCTAGCTGCGTCGGTC-------TTTACTAACC----AACCAACACCAAACCAAACTAAAATAAAAA-----CCGAGCGTACAGCTTAGAGCTGT---CGCTCAC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCTCTCTCCCTCCCT----------GGTGTGGGTATGAGAACGGATCTGGCTGTCTCGGCAATCAC------------------TTGATTGCCGGGTCAGCTGAAGT--GCAGAGGTT--GAT--GCATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAATTCG----TTGCTA-----ATGCTTTAGTAGATGGCTT---GGGAC--TGTGCC----TGTTGACCCAAAC-CAGGAA---CTCAGCCTC---GTGCTGAG---CAAACCCCTATTTTC Yamagishiella_unicocca_U2428 AATCTA--TCATAATCCACACA----------CCGTGAAATATAAA---TGTTGGCCAC---CTGTACTGCAGT------------------------------------AATGTAGTACAGGG--TGAGGTTTGTACGAGCG-----------------CAACGCCGTGCAAGCCTCAGTCGCTGTGGGTGCATATA---------------------------CTTGTGTATGCACCTTGGCGTCGGTC-------TTAATTAACC----AACCAACACCAAACCCTAAATTAATATAAA-----TCGAGTGTTCAGCTTAGAGCTG---ACGCTCAC--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATA-TCGCTCATTACTCACCAT-----------GGTGAGTAACCAAGCGGAACTGGCTGTCTCGGTAAGATTAA----------------TTTTTTACCGGGTCAGCTGAAGT--GCAGATGTT--AAA--CCATGGACCCGC---TA-------TGGGCCTCTACTGGGTAGG-CAACTTG----TTGCTCA----ATGCTTTAGTAGATGGCTT--AGGGAC--TGTG-------TTTGGCACAAAG-CAGGAAT-----ATTCTTAAT----TGAGTATACCCCCTTTATTTTC Volvulina_steinii_U1525 AATCTA--TCAAA-TCCACACAC---------ACGTGAATTATTC----CGTTGGCCAT---TCGAAAAGAAA-------------------------------------------TTTTCGGAT-TGGGGC-TGGGCTGTTAG---------------------CTCATCTCAGCTCTGGCTGCCATATTACTAATTC-------------------------------GTTAGTAATATAGCATCGGC--------CGTACAAACTGCC-AACCAACAACCAACAAAACAAATTAT---------ACGGATGCACGGCAGAGTGCCGT--ACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCTCCTTACCAT-----------------GGGAAAGAGTGGAACTGACCGTCTCAGCACGCAATC----------------GTGTGTGCTGGGTCTGTTGAAGTTTGCAGTTGCT--GAT--ACATGGAACTGC--GTATGG----CGGGCCTCTACTGGGTAGG-CAATTAACG--TTGC--------TGC---AGTGGTTGGCTTTTACGTTC--TGTGTT----TGTCGGCACAAAA-CAGG-----ACATGCCTTT---GGCATGC----AACCCTCTTTTTTC Volvulina_steinii_Chile AATCTA--TCATAAACCACAC-----------ACGTGAATTACTTA---TGTTGGCCAT---CCGGGGTAAAA---------------------------------------------TCCGGGT-TGGGG--TAAATTTACCGC------------------AAGGCAAGTTTATCCTGGCTGCGTACTACTATCT------------------------------------AGTAGTACGGTTTCGGC--------CGTACTGCT-----AACCAACAACAAACTAAATAACTATTAAAA-----ATGGATGTACAGCATAGTGCTGT--ATATTCGC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGGGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCAATAATA--------------------CTGTTGGAGTGGAACTGACCGTCTCAGCAACTT--------------------TTGTTGCTGGGTCGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGAACTGC-CGTATGG----CGGGCCTCTACTGGGTAGG-CAATTAATT--TTGC--------TGC---AGTAGTTGGCTT--CGTGTC--CGTG------TGTTGGCACAAAA-CAGGA----ACATGCCTCT---GGCATGC----ACCTCTC-TTTATC Volvulina_steinii_Arg AATCTA--TCATAAACCACAC-----------ACGTGAATTATTTA---TGTTGGCCAT---CCGGGGTAAAA---------------------------------------------TCCGGGT-TGGGG--TAAATTTACCGCAA------------------GGCAAGTTTATCCTGGCTGCCGTACTACTAT------------------------------------CTAGTAGTTGGTTTCGGC--------CGTACTGCT-----AACCAACAACAAACTAAATAACTATTAAAA-----ATGGATGTACAGCATAGTGCTGT--ATATTCGC--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGGGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTTCAACATCC--------------------CTGTTGGAGTGGAACTGACCGTCTCAGCAACTT--------------------TCGTTGCTGGGTCGGTTGAAGTTTGCAGCTGCT--GAT--ACATGGAACTGC-CGTAT------CGGGCCTCTACTGGGTAGG-CAATTAATT--TTGC--------TGC---AGTAGTTGGCTT--CGTGTC--CGTG------TGTTGGCACAAAA-CAGGA----ACATGCCTCT---GGCAC----TATCCTCTCTTTTATC Volvulina_steinii_U1531 AATCTA--TCAAA-TCCACACAC---------ACGTGAATTATTC----CGTTGGCCAT---TCGAAAAGAAA-------------------------------------------TTTTCGGAT-TGGGGC-TGAGGTGTTAA---------------------CTCATCTCAGCCCTGGCTGCCTTATTACTAA------------------------------CTTGTTAGTAATACCGGCATCGGCC--------ATACTAACTGCC-AACCAACAACGAACCAAAAAAATTAT---------TTGAATGCATGGCAAAGTGCCGT--ACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACTCCTCCTTACCAT-----------------GGGAACGAGTGGAACTGACCGTCTCAGCACGCAA-------------------TGTGTGCTGGGTCTGTTGAAGTTTGCAGTTGCT--AAT--ACATGGAACTGC-CGCATGG----CGGGCCTCTACTGGGTAGG-CAATTAACT--TTGC--------TGC---AGTGGTTGGCTTTTACGTTC--TGTGTT----TGTTGGCACAAAA-CAGGA----TCATGCCTTC---GGCATGC----AACCCTCTTTTTTC Pandorina_morum_BARB AATCTA--TCAAA-TCCACACAC---------ATGTGAACCTTCAA---TGTTGGCCAT---CTAGTGGAGAGCGTGTGTGTGTGTGTGTGTGTCNCACGCACACGCACACCCCCCCCATTAGAT-TGGGATCCGTACACAGC--------------------ACGTGCACGGGTTCTAGGCGTTTGTCGTACATCAGCC-----------------------AGCTTCTGCTGTACGGCAGGCATCGGCCC------TTAACTAACTTC--AACCAACTCTTAACTGAAGAAACTAACAA------CTGACAGTACGGCTAAGAGTCTT--ACTGTCGA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCACCACATTCCCATC--AATCTGCGGAATGTGTTTCTGGCGGAACTGACTGTCTCGGCACGTGTTTTTT---------GCAAACACAGGCCGGGTCGGTTGAAGTTTTCAGCTGCT--GAC--ACATGGACCCGC---TCAA-----TGGGCCTCTACTGGGTAGG-CAATTAACC--TTGCTACA--AATGCTTTAGTGGATGGCTT--TGGATCCATGGCTG----TGTCAGCACACAAACAGGA----ACATGC-ACACCTTGCATG-----ATCTTCTTTTTTCC Volvulina_pringsheimi AATCTA--TCAAA-TCCACACAATA------CACGTGAACTACTA----TGTTGACCAT---CCGTGA-------------------------------------------------AAACGGAT-TGGGT--TGGAGGCAGGTTACAC-----------------TGTTTCCAGCCCAGGCGTTAGTGCCTGCATT---------------------------------CTGCAGACACTGGCTTCGGTC-------TTTTCTAACTACT-AACCAACACATAACTGAATAA-CTAAA-------TCCGAACATACGGCTAAGAGTCGA--ATGTTCAA--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACACGCTCAATCCATTC----------------ATGGGTATGATGCGGAACTGGCAGTCTCGGTAGCTT--------------------CGGTTGCTGGGTCTGCTGAAGTTTACAGCTGTT---GC--ACAAGGACCTTC---TA-------TGGGCCTCTACTGGGTAGG-CAAACTT----TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATC---GTTG-----TGCTGACACTAAT-CAGGA----GCATGC------ATGCATGC-----AAAACCCTTTTTC Volvulina_compacta_NIES583 AATCTA--TCAAA-TCCACACAC---------ACGTGAACCATCC----TGTTGACCAT---CTGTGTGTGCACTTG-----------------------------------TGTGCACACAGAT-TGGGG--TGGGTGCCGTT-------------------AAAAGCATTCATCCCAGGCGTCTATGCAC------------------------------------CTCTGTGTGCATAGGCTCAGGTC-------TTTACTAACTC---AACCAACAATCTAA-CTAAATTAATAAAAA-----TCGAGTGTATGGCTAAGAGTCAT--GCATTCAC--TAACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACACTACCCAACC------------------GGGTATGTTGTGGAACTGGCTGTCTCAGCATGCATT------------------AGCAAGCTGGGTCAGCTGAAGT--GCAGATGTC--AAC--ACATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----TATGCTTTAGTAGATGGCTT--AGGATC--TGTGTA----AGTAGACACAAAA-CAGGA----GCATGCCTT---GTGCGTGC-TACATGTACCTTTTATC Volvulina_compacta_Nozaki AATCTA--TCAAA-TCCACACAC---------ACGTGAACCATCC----TGTTGACCAT---CTGTGTGTGCACTTG-----------------------------------TGTGCACACAGAT-TGGGG--TGGGTGCCGTT-------------------AAAAGCATTCATCCCAGGCGTCTATGCAC------------------------------------CTCTGTGTGCATAGGCTCAGGTC-------TTTACTAACTC---AACCAACAATCTAA-CTAAATTAATTAAAA-----TCGAGTGTATGGCTAAGAGTCAT--GCATTCAC--TAACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACACTACCCAACC------------------GGGTATGTTGTGGAACTGGCTGTCTCAGCATGCATT------------------AGCAAGCTGGGTCAGCTGAAGT--GCAGATGTC--AAC--ACATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----TATGCTTTAGTAGATGGCTT--AGGATC--TGTGTA----AGTAGACACAAAA-CAGGA----GCATGCCTT---GTGCGTGC-TACATGTAC-TTTTATC Pandorina_morum_U1730 AATCTA--TCAWA-TCCACACAY---------RCGTGAACCATMY----TGTTGACCAT---CYGTGTGYRC-----------------------------------------GTRCAYRCRGAT-TGGGR--TGCVWGCYGTY-------------------AMAVGCAKYCATCCCAGGCGTCTACgCRY------------------------------------CKYYGYRYGCRTAGGCTCAGGTC-------TTAACTAACCC---AACCAACWAYYTAA-YTTAAHWRAAHHWA------YCGRDTGYMTGGCTAAGAGTCAY--GCATTCAM--WAACCAA--GACAACCTTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACWYWACCMWMCC------------------GGGTAYGWYGTGGAACTGGCTGTCTCAGCATRYRBD------------------HSSMWGCTGGGTCAGCTGAAGT--RCAGATGTC--RAC--ACATGGACCCGY---TWA------TGGGCCTCTACTGGGTAGG-CAATTTA----TTGCTA----YATGCTTWAGTRGAYGGCTT--AGGATC--TGTGH-----BGTRGACACAAAA-CAGGA----GCATGCCWY---GTGYGTGCYTACAYGTRCCTTTTWTC Paulschulzia_pseudovolvox_U165 AATCTA--TCACAATCCACAA-----------CCGTGAACCACTT----TGTTGGCCT----CCACAATCCTTC--------------------------------------GGGCTTTGTGGGC-TGGCCC-GGCCTGATTCATTTC--------------------GGGCTGGGACAGGTCCTTGGCTTCGCC---------------------------------TTGCGGCGCTGCTGGGGTCGGTCT------CTAATTAACC----AACCAACACCAAA--CCAAAACACCTAAACAAAACCTGAGTGCC-GGCTTAGAGCCG---AAGCTCAT--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAACCATCGAATCTTTGAACGCATATTGCGCCCGCGTCTTCGGACAAGGGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCAATACAGATCCAT-----------GTGGTTTGTCTATTGCGGACCTGGCCGTCCCGATTGATT------------------CAATTCGGTCGGGTCGGCTGAAGA--ACAGAGGTT--GAC--GCATGGACCCGA---TA-------TGGGCCTCAACTGGGTAGG-CAATTCG----TTGCTG----TATGCTTTAGTTGATGGCTT--GTGGAC--TGTGCAT---TGTCGGCCCTAAC-CAGGAA---CCAAGCCTT---GCGCTTGG---AACAAACCCATTTTC Chlamydomonas_reinhardtii AATCTA--TCACAATCCACA------------CCGCGAACTAACAC---TGTTGGCCT----CCGTCTGT-GTAAAA--------------------------------------GCAAACGGGC-CAGGTC-TGGGCGCAATGT---------------AAAAGTTACGCCTGGCCTGGGTTGCC--GCAA-------------------------------------------------GGCATCGGTCTC----TTATACTAACC----AACCAACACCAAA--CCAAAACTAAATTAAAA---CCGAGTATCTAGCTTAGAGCTA---GTGCTCAC--TAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCGGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AATACTCGCCCTACTCCAACATACACTT--GTGTGTTTGGAGCAAGAGCGGACCTGGCTGTCTCGGTGTTTGA----------TTTTCGGATCAGACGCCGGGTCAGCTGAAGT--ACAGAGGTT--GAT--GCATGGACCCGC---TTA------TGGGCCTCTACTGGGTAGG-CAACTCG----TTGCTA-----ATGCTTTAGTAGATGGCTT---GGAGC--TGTGCT----TGTCGACCCAAAC-CAGGAA---CTTTGGCCCT--GTGC-CG-AAGCAAACCCCTATTTTC Pandorina_morum_Noz3923 AATCTA--TCAA--ACCACAC-----------TTGTGAACYAACCA---TGTTGGCCAT---TYDTRCMTDYMTYYK-----------------------------------GGTRKGHRHGRAT-CGGKW--TKRGGGYTTRAD--------------YWWHHHAVVCHBWMWRYCCGGCTGTCRTTGCAGGG-----------------------------------TKYTCCCYCAGCGGCATCGGCCY------TTTGCTAAC-------CCAACACCAAACMWAACATWAAHHAHA------YYGRAYRCAWGGCTWAGAGCYNT--GTGTTCAH-ACAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTTGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAAMCTCGCTCWAMAHHMMHHH-----------GKGTGYGTSYADGAGCGGAMCTGACTGTCTCAGYAMDSB------------------MARCWGTGCTGaGTCRRTTGAAGTTTGCAGCTGTT--GGT--ACATGRACCCGC---TMAA-----TGGGCCTCTACTGGGTAGG-CAAYWCGT---TTGCTC----TATGCTTWAGTAGACGGCYT--AGGWTY--TRTGTHA---TGCCARCACAAAG-CAGGAAT----GCGCCWT---GTGTGCATY-----AMMMCYTTTTYY Pandorina_morum_Kiev AATCTA--TCAA--ACCACACCT---------TTGTGAACTAACCA---TGTTGGCCAT---TCGTGCCTTT--------------------------------------------GGCACGGAT-CGGAT--TGGGGGTTTGAAG-------------CAATTCAAACACTCAGCCCGGCTGTCGTTGCAGGG---------------------------------TCTTTTCCCTCAGCGGCATCGGCCTC-----TTTGCTAAC-------CCAACACCAAACCAAACCTAAATTACAAA----CCGAATGCATGGCTTAGAGCTGT--GTGTTCAA-AGAACCAAA-GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTA-AAACCTCGCTCTACACTCACCCATCT------GGTGTGTGTGCATGAGCGGACCTGACTGTCTCAGCACGGTGT--------------CAAAGCTGTGCTGGGTCGGTTGAAGTTTGCAACTGTT--GGT--ACATGGACCCGC---TAAA-----TGGGCCTCTACTGGGTAGG-CAACTCGT---TTGCTC----TATGCTTTAGTAGACGGCTT--AGGATTCATGT-TA----TGCCAGCACGAAG-CAGGAAT----GCGCCTT---GTGTGCATC---AAAACCCTTTTTCT Pandorina_morum_U882 AATCTA--TCAA--ACCACACCT---------CTGTGAACYATAM----TGTTGGCCAT---CTGTACYGY-------------------------------------------AAGGTATGGAT-YGGADC-TGGYYTYRAAGCAATT----------------YGMGRYYAGATCYRGCTGTCRTCHTGAGRRGCSWBRHM-------------------------GCKCTCTCTCWTYGGCATCGGYC------TTATACTAACCTT--TACCAACACCAAACCTTAACAATMAATACAAC---ACGGATGCATGGCTTAKAKCTGT--GTGTTCAC--AAACCAAA-GATAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGTCTCAGCGTCGGGTA-AAYACTCGCTCYRAARCAYCMTTYW---------GGGKTRTKGAKKWGCGGACCTGACAGTCCYAACACATGT----------------HACAGTGTGGTGGGTCAGTTGAAGT--GTAGMTGTT--GGT--ACACGGACCcGW---TCA------YGGGCCTHTACTGGGTAGG-CAA-TMKCA--TTGCTA----MATGCTKTAGTAGATGGCTT--AGGAGC--TGTG------TGCTGGCAAAA---CAGGAAT--ACATGTCTT----CATGTATA-YACATACACTYTTTYC Pandorina_morum_U865 AATCTATATCAA--TCCACACATTTAT---GTACGTGAACCTATAACC-CGTTGGCCTT---CCATTTTTGCCGAATTTCGGTT---------------------------CGGCAGTTATGGAATTGACAC-AGAGTTATTGGTAACTCG--------------ATAATTCTGAGTCAGCCGTCAGAGTAAATATGCACTTG------------------------TGTGTGTTTGCTTTGGCTTCGGCCT-----TTTTACTAACC----AACCAACACCAAAAATAATTATTAAATTAAAT---ATATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACGTGTTAATTC-------------------ATTTAATACGTGGAACTGACTTTCCCTTGTGATTATTT------------ATTTATTCACATGGGTGGGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAC------TGGGCCTCTACTGGGTAGG-CGGTTTATAA-TTGCTA----AATGCTTTAGTAGATGGCTT--AGGGTT--TGTAT--GTGTGCTGGCACAAAC-CAGGAAA-----------------------ATTAATTTTCTTTTTTC Pandorina_morum_CHILE AATCTATATCAA--TCCACATTTTACT--TACCCGCGAACCAATGACC-CGTTGGCCTT---CCATGTACGTATTGTTTTGGTT---------------AATATCAACAAAGTACGTATGTGGAATTGGTAC-GAAAGTGTTGAAATAT----------------ATACTTTTGCACCAGCCGTCAGTGTATTAATATTGTGTACGA-----------CAAGTACGCAATTTTATTGCATTGGCTTCGGCCTTATTAATTAACTAACC----AACCAACACCAAAACTAATATTACTAATAATTACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCAAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGCCTCATTAATTATTTAA-----TTAACTAATGAGCACATGGAACTGACTATCCCTTGTGTTATATTT--------AATTATATAGCACGTGGGTTAGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAAGGCAGTTTTTAA-TTGCTCT---AATGCTTTAGTAGATGGCTT--GGGGCT--TATGCTTGTGTGCCGGCACAAAC-CAGGAAT---------TAATATTTTAATATTAATAATATTCTTTTTC Pandorina_morum_MONG AATCTATATCAA--TCCACATTTTACT--TACCCGCGAACCAATGACC-CGTTGGCCTT---CCATGTACGTATTTTTTTGGTT---------------AATATCAACAAAGTACGTATGTGGAATTGGTAC-GAAAGTGTTGAAATAT----------------ATACTTTTGCACCAGCCGTCAGTGTATTAATATTGTGTACGA-----------CAAGTACGCAATTTTATTGCATTGGCTTCGGCCTTATTAATTAACTAACC----GACCGACACCAAAACTAATATTACTAATAATTACGTAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCAAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGTCTCATAAATTATTTAA-----TTAACTAATGAGCACATGGAACTGACTATCCCTTGTGTTATATTT--------AACTATATAGCACGTGGGTTAGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAAGGCAGTTTTTAG-TTGCTCT---AATGCTTTAGTAGATGGCTT--GGGGTT--TATGCTTGTGTGCCGGCACAAAC-CAGGAAT---------TAATATTTTTATATTAATAATATTCTTTTTC Pandorina_morum_Mad AATCTATATCAA--TCCACATCTTTTT---ACATGCGAACCTATGACC-CGTTGGCCTT---CCTGCCGTACTC-----------------------------------TACGTACGGTTTGGAATTGACAC-AGATCTATTGTAACAG----------------ACAGAACTATGTCAGCCGTCAGCGTATG--------------------------------CTCCTTTGCATATGCTGGCTTCGGCCTTA--AATTTACTAACC----AACCAACACCAAA-CTAA--TTACTAATCATTACGTAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAAGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGTCATATATTTTC-----------------TATGTGACGTGGAACTGACTTTCCCTTGTTTTTTTATT--------TAATTAAAATCACACGGGTGGGTTGAAGTTTGCAGCTGCT--GCA--TCATGGACCCGT---TAA------TGGGCCTCTACTGGGTAGG-CAGTTTGAAA-TTGCTA----TATGCTTTAGTAGATGGCTT--AGGGTT--TATGCTTGTGTGCTGGCACAAAC-CAGGAAA-------------------CATTTAACCAAAATCTTTTTC Pandorina_morum_U2327 AATCTATATCAA--TCCACACTTTA-----ACACGTGAACTAATGACC-CGTTGGCCTT---CCACCATTGGTGCTGTGTAA---------------------TGCAGTAATACTGGTGGTGGAATTGGCG--TGGAGTTAGAAAT-------------------AATTGCTCGCGCCAGCCGTCAGCAGGTGGN------------------------------------NGCTGCATCTGGCTTCGGCCTTT-AAATTTACTAACC----AACCAACACCTAAAAATAAATTCTAATTAA-TACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGCCAAAATTACTATTTAA------TTAGTAATGGCGGCGTGGAACTGACTCTCCCGTGTGGGTTTT------------AATTAACTCACGCGGGTTAGTTGAAGTTTTCAGTTGCT--GCA--ACATGGACCCGT---CTAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTAA--TTGCTA----CATGCTTTAGTAGACGGCTT--TGGGTT--TATGACCTT-TGCTGGCACAAAC-CAGGAAA----------------------ATTACTAACCTTTTTTGC Pandorina_morum_A160 AATCTATATCAA--TCCACACTATA-----ACACGTGAACTAATGACC-CGTTGGCCTT---CCACCGTTGGTGCTGTTTAA---------------------TATGACAGCACTGGTGGTGGAATTAGCG--TGGAATTAGAAAT---------------------AATTCTACGCTAGCCGTCAGTTGTGCCTCTGTGCAAATGCATGCATCTTTTGCATGCATGAGCACATGTGCTCTGGCTTCGGCCTTAT-AATTTACTAACC----AACCAACACCAAAAAATAAATTCAATTTTA-TACATAATGTGTACGGCTTAGAGCCGATGACATT-AA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCGCCAAAATTACTTTTACTAA----TTAGTAATTGCGGTGTGGAACTGACTCTCCCGTGTGGGTTTT------------AATTAATTCACGCGGGTTAGTTGAAGTTTTCAGTTGCT--GCA--ACATGGACCCGT---TTAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTAA--TTGCTA----CATGCTTTAGTAGACGGCTT--AGGGTT--TATGACCTT-TGCTGGCACAAAC-CAGGAAA-------------------------ATTTAACCTTTTTTC Pandorina_morum_U869 AATCTATATCAA--TCCACACTTTTT------ATGTGAATTTTTAAA--CGTTGGCCTT---CCACCAGGGGGGGGAG--------------------------TTTCTCTCCCTCAGGGTGGAATTGGTGC-AAATTTGTTGAAATATT---------------ACAAATTTGTGCCAGCCGTCAATTGTATGGAATTTT-----------------------------CCCATACTTTTGGCTTCGGCCTAA--ATTTTACTAACC----AACCAACACCAAAAATTAATTT-AATTTAATTACGTAATG--CACGGCTTAGAGCCGT--ACATTCAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCTAAATCTCTCCCCTGT----------GGCGTGATATATGCGGAACTGACTGTCTCATGTACACATT--------------CGTGTGTACATGGGTTGGTTGAAGTTTTCAGCTGCT--ATT--ACATGGACCCGT---TAAA-----TGGGCCTCTACTGGGTAGG-CAGTTTTTAA-TTGCTA---AAATGCTTTAGTAGATGGCTT--AGGATC--TGTGT-GGC--AATGGCACAAAC-CAGGAAA------------------------ATTAAACCCTTTTTTC Pandorina_morum_U853 AATCTATATCAA--TCCACACTTTTAT----AACGTGAACCTCAAAAC-CGTTGGCCTT---CCATAACGCGCATTTTCGGAT-----------------------------GTGCGGTGTGGAATTGGTAC-GGATGCGTGTCT--CTCG-----------CACACATGTTCGTACCAGCCGTCGATTTCATGGTTTT------------------------------GCCCATGGATTCGGCTTCGGCCTCAT--TTTTACCAACC----AACCAACACCAAAACTTAAAT-AAATT--ATTACGTAATG--CACGGCTTAGAGCCGT--ACATTCAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCACA-CTAAAAAACCT--------------GCTTTTTTGGTGTGGAACTGACTGTCTCATGTGCGCGCAC------------AAACATGCGCATGGGTTGGTTGAAGTTTGCAGCTGCT--ATT--ACATGGACCCGC---TCA------TGGGCCTCTACTGGGTAGG-CAGTTTTTAA-TTGCTA----AATGCTTTAGTAGATGGCTT--AGGATC--TGTGT----GTATTGGCACAAAC-CAGGAA-------------------------ATTAACCTTCTTTTTC Pandorina_morum_U874 AATCTCTATCAA--TCCACACTTTTTT--TACACGTGAACCCGTAAAC-CGTTGGCCTT---CCGCCGGATTTTTTTAGAGAATTTTCAATTAA-NNTAATTTAAATCAATTAATTCCGGCGGAATTGGTAC-GGCGATGTCGT---------------------ACATTTCCGTACCAGCCGTTAATTTTATGGTTTT------------------------------GCCCATAAAATTGGTTTCGGCCTTTT--TTTAACCAACC----AACCAACACCAAAA-TTAAATGAAATT--ATT---ACTAATGTACGGCTTAGAGCCGT--ACATTTAA--AAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCATGCCTAAAAAACCGTCT---------GGTTTTTTGGAGCGTGGAACTGACTGTCTCATGTGTGTGTGT---------ATATGACACACGCATGGGTTGGTTGAAGTTTTCAGCTGCT--ATT--ACATGGACCCGC---TCA------TGGGCCTCTACTGGGTAGG-CAGTTTTACA-TTGCTAC--AAATGCTTTAGTAGATGGCTT--AGGATC--TGTGT----GTATTGGCACAAAC-CAGGAAA--------------------------CAAAACCTTTTTTC Pandorina_morum_U2328 AATCTATATCAA--TCCACACTATT-------ACGTGAACCTCTAAAT-CGTTGGCCTT---CCACCTT---------------------------------------------AACGGGTGGTA-TGGTAC-GGTATCGCTGCAAAG------------------CGATGCTGTGCTAGCCGTCAGCTGCACGGAT---------------------------------CCCGTGCAGCTGGCTTCGGCC-------TTTACTAACC----AACCAACACCTAACCAACTATAATGATAA------TCGAATGTACGGCTTAGAGTCGTTCACATTCAC--CAACCAA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATCTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCTCCAACTAA---------------------CCTTGGGTGCGGAACTGACTGTCTCATGCACGCCCT---------------GAGTGCGCATGGGTCAGTTGAAGTTTGCAGCTGCT--GCT--ACATGGACCCGC---TAA------TGGGCCTCTACTGGGTAGG-CAGTCTTGTACTTGCTA----CATGCTTTAGTAGATGGCTT--TGGATC--TGTGTTGGC---TAAGCACAAAC-CAGGAAA---------------------------CTAACCTTTTTTC Pandorina_morum_U871 AATCTA--TCAAA-TCCACACCACATATATGCCTGTGAACCTAAAT---CGTTGGCCAG---CAATCTTG----GATGCTC-GCTCCTCT-----------GTGGAGTGAACAGAGAGGATTGTT-TGGGGG-GCGTGCATTT-------------------CATATGCATTTCCCCTAGGCGTTCATGCACTGG------------------------------CTCTTGCCATTGTATGGGCTTCGGCCG-----TCTGTCTAACT------CCA-CACCAAAC-TTAAACCAACCATAAA----CCGACTGTACTGCATAGTGCCGT--ACTGTCAA--AAACCTA--GACAACTCTCAACAACGGATATCTTGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCTGTTTGT-ACACTCT-------GTTGTACACACACGTGCGGAACTGGCTGTCTCAGCATATATTT---------------------GACTGGGTCAGCTGAAGTATGCAGCTGTT--GAT--GCATGGACCCGC---TATA-----TGGGCCTCTACTGGGTAGG-CAATTGATT--TTGCTG---TCATGCTTTAGTAGATGGCCT--AGGATC--TGTGTG----TATCAGCACAAAA-CAGGAAACACCGACTC-----GTCGGTGTTCAACTATTACTTTATCC Pandorina_morum_A164 AATCTA--TCAAAATCCATACCACAT-TATACCTGTGAACCTAAAT---CGTTGGCCAG---CAATCTTTTCTTGATGCTTTGCTCCT--------------AGGAGTGAACAGAGAGGATTGTT-TGGGGG-GCGTGTGT-----------------------CATGCATTTCCCCTAGGCGTTCATGCATTGG------------------------------CTGTCGCCATTGCATGGGCCTCGGCCGTTC--TCTGTCTAACT------CCA-CACCAAAC-TTAAACCAACCATAAA----CCGACTGTATGGCACAGTGCCGT--ATTGTCAA--CAACCTA--GACAACTCTCAACAACGGATATCTAGGCTCTCAGATCGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAAATACGTGAATCATCGAATTTTTGAACGCAAATTGCGCTCGAGGCTTCGGCCAAGAGCATGTCTGCCTCAGCGTCGGGTT-AAAACTCGCCTGTTGTGCACACTCT-------GTTGTTCACACATGCGCGGAACTGGCTGTCTCAGCATATATTT----------------GTATATGCTGGGTCAGCTGAAGTATGCAGCTGTT--GAT--GCATGGACCCGC---TATA-----CGGGCCTCTACTGGGTAGG-CAATTGAGT--TTGCTG---TCATGCTTTAGTAGATGGCCT--AGGATC--TGTGCT------TCAGCACGAAA-CAGGAAACACCGACTG-----GTCGGTGTACAACTA-TACTTTATCC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 811 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;