NEXUS [File created by TreeBASE: 7/26/07 20:59:16] [Matrix accession#: M982] BEGIN TAXA; TITLE M982; DIMENSIONS NTAX=43; TAXLABELS Trichoderma_hamatum_Z48816 Trichoderma_asperellum_AJ230668 Trichoderma_asperellum_AJ230669 Trichoderma_viride_X93986 Trichoderma_atroviride_CBS351.93 Trichoderma_koningii_Z79628 Hypocrea_rufa_AJ230667 Trichoderma_atroviride_GJS95.12 Trichoderma_aggressivum_TH2_CBS689.94 Trichoderma_aggressivum_TH2_CBS100525 Trichoderma_aggressivum_TH4_GJS99.29 Trichoderma_aggressivum_TH4_GJS99.30 Trichoderma_aggressivum_TH4_GJS99.33 Trichoderma_aggressivum_TH4_GJS95.122 Trichoderma_aggressivum_TH4_GJS95.118 Trichoderma_aggressivum_TH4_GJS99.31 Trichoderma_aggressivum_TH4_GJS99.32 Trichoderma_aggressivum_TH4_GJS95.115 Trichoderma_aggressivum_TH4_GJS95.117 Trichoderma_aggressivum_TH4_GJS95.128 Trichoderma_aggressivum_TH4_GJS95.111 Trichoderma_harzianum_GJS95.14 Trichoderma_harzianum_NR6929 Trichoderma_harzianum_IMI359823 Trichoderma_harzianum_GJS99.226 Trichoderma_harzianum_GJS99.225 Trichoderma_harzianum_NR6883 Trichoderma_harzianum_TR108 Trichoderma_harzianum_NR5555 Trichoderma_harzianum_NR5546 Trichoderma_inhamatum_CBS273.78 Trichoderma_aureoviride_NR6931 Trichoderma_harzianum_GJS99.231 Trichoderma_harzianum_GJS99.227 Trichoderma_harzianum_GJS99.230 Trichoderma_aureoviride_NR6950 Trichoderma_aureoviride_NR6938 Trichoderma_harzianum_AF055213 Trichoderma_harzianum_CBS227.95 Trichoderma_inhamatum_Z68188 Trichoderma_harzianum_CBS226.95 Trichoderma_citrinoviride_AJ230663 Trichoderma_longibrachiatum_AJ230665 ; END; BEGIN CHARACTERS; TITLE M982; DIMENSIONS NCHAR=225; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Trichoderma_hamatum_Z48816 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTAAAAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGAACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------G-TATTTCTT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_asperellum_AJ230668 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGAACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------G-TATTTCTTTACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_asperellum_AJ230669 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGAACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------G-TATTTCTT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_viride_X93986 CGAGTTTACAACTCCCAAACCCAATGTGAA-CCATACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------GTTATTT-TT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_atroviride_CBS351.93 CGAGTTTACAACTCCCAAACCCAATGTGAA-CCATACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTAGTCCC------------CTCGCGGAC--------------------GTTATTTCTT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_koningii_Z79628 CGAGTTTACAACTCCCAAACCCAATGTGAA-CCATACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------GTTATTTCTT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Hypocrea_rufa_AJ230667 CGAGTTTACAACTCCCAAACCCAATGTGAA-CCATACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTAGTCCC------------CTCGCGGAC--------------------GTTATTTCTC-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_atroviride_GJS95.12 CGAGTTTACAACTCCCAAACCCAATGTGAA-CCATACCAAACTGTTGCCTCGGCGGGG---TCACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTAGTCCC------------CTCGCGGAC--------------------GTTATTTCTT-ACAGCTCTGAGCAAAAATTC-AAAATGAATCA Trichoderma_aggressivum_TH2_CBS689.94 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGCTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCCCTCGTGGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH2_CBS100525 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGCTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGANG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCCCTCGTGGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS99.29 CGAGTTTACGACTCCCAAACCCAGTGTGA--GGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCATCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACGCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAGAATGGATCA Trichoderma_aggressivum_TH4_GJS99.30 CGAGTTTA-AACTCCCAAACCCAATGTGAAACGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAACCCCGGA--CCAAAGCGCCCGCCGGAAG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTGTGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS99.33 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGANG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.122 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTA--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.118 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS99.31 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS99.32 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.115 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.117 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.128 CGAGTTTA--ACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGG-TGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTA-ACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTC-AAAATGAATCA Trichoderma_aggressivum_TH4_GJS95.111 CGAGTTTA-AACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCCAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TATTTTTACTAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS95.14 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCCCTCGTGGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_NR6929 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_IMI359823 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACCTAAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTTT-CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS99.226 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS99.225 CGAGTTTACAACTCCCAAACCCCATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_NR6883 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_TR108 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TTTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_NR5555 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TTTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_NR5546 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TTTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_inhamatum_CBS273.78 CGAGTTTACAACTCCCAAACC-AATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGT---TTTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aureoviride_NR6931 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTA-TTGTATACCC-----------CCTCGCGGGTTTTTTTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS99.231 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS99.227 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT----TTTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_GJS99.230 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aureoviride_NR6950 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_aureoviride_NR6938 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_AF055213 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_CBS227.95 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_inhamatum_Z68188 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCC-GCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_harzianum_CBS226.95 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAAACTGTTGCCTCGGCGGGA-TCTCT-GCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCCGCCGGAGG-ACCAACC-AAAACTCTTT-TTGTATACCC-----------CCTCGCGGGT-----TTTTTATAAT-CTGAGCCTT--CTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCA Trichoderma_citrinoviride_AJ230663 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAATCTGTTGCCTCGGCGGGATTCTCT-GCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCCGCCGGAGG-ACCAACTC-AAACTCTT--TTTTCTCTCCGTCGCGGCCTACGTCGCGGCTCTGTTTTATTTTTGCTCTGAGCCTTT-CTCGGCGACCCTAGCGGGCGTCTCGAAAATGAATCA Trichoderma_longibrachiatum_AJ230665 CGAGTTTACAACTCCCAAACCCAATGTGAA-CGTTACCAATCTGTTGCCTCGGCGGGATTCTCTTGCCCCGGGCGCGTCG-AGCCCCGGATCCCATGGCGCCCGCCGGAGG-ACCAACTCCAAACTCTT--TTTTCTCTCCGT-GCGGCTCCCGTCGCGGCTCTGTTTTATTTTTGCTCTGAGCCTTT-CTCGGCGACCCTAGCGG-CGTCTCGAAAATGAATCA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 225 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;