NEXUS
[File created by TreeBASE:  7/26/07  20:59:53]
[Matrix accession#: M1075]

BEGIN TAXA;
	TITLE M1075;
	DIMENSIONS  NTAX=9;
	TAXLABELS
		Naucoria_escharoides	Naucoria_bohemica	Hebeloma_fastibile	Hebeloma_crustuliniforme	Gymnopilus_spectabilis	Cortinarius_violaceus	Cortinarius_brunneus	Anamika_indica	Agrocybe_praecox
	;
END;

BEGIN CHARACTERS;
	TITLE M1075;
	DIMENSIONS NCHAR=2432;
	FORMAT DATATYPE = DNA MISSING = N GAP = -  ;
	MATRIX
		Naucoria_escharoides           NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCGGAAGGATCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTCTC--GGG-GGCA---TGTGCACA-CCC-ATCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CCT-GGA-T-TGA----CTTTCCG----GG-C------AACTCGG-------TCGG------GAAGAT--TG-CTGCGC--TCTGT---GAGCCAGCTTTCTTTGCA-TGT-CC---AGGACTATGTT---TTTTCA-TATA--CCCCTATAG-AAT-GT-AACAGAATGT---ATCA---TTGGGCC-T-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATTA--AC----TTTTGT-TG-AT-AATGGATTGGA-TA--TGGGGG-----TTTCTTTTGCTGGCTTCTT------CAC-AGAGA-TCAGCTCCCCTTAAATG-CATTAGCTGG--TGA-CCCGCGTGGA--CC---ATCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCAATCA--ATA-TGGG-TTTTGCACTG-CTT-CT-AA-CCGTCT-GTTC-ATTCGGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTCC------------GGCCGTTCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTT--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-GATCAACC-TTGC------TTTTGCTGGGCGTACTTTCCGG-----TCGACGGGTCAGCATCAATTTTGAC-CGTTGGATAAA-GTTCAGGGGAA--TGTGGCATCTTC----GGATGTGTT-ATAGCCCTT-GGTCGCATACAAC-GATTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TAC-TTG-TACCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACCCGGG-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGATCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTTTCCCTCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Naucoria_bohemica              NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCCCTCAAGGG-GGCA---TGTGCACG-CCC-GCCATCCTC--ATCT---CTTCACC--TGTGCACCTCTTGTAGG-CTT-GGA-T-AGA-TTTTTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAA--TG-CTGCGC--TCTGT---GAGCCAGCTTTT---GCAATTTTTCC--AAGTCTATGTT----TTTCA-TATA--CCCCATTAG-TAC-GT-AACAGAATGT-----CA---TTGGGCGCTTAG-CG-CC-TATAAA---GTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCTTTATTA--GC----TTTTGC-TG-GTAAATGGCTTGGA-TG--TGGGGG----------CTTGCTGGCTTT---------------GG-TCAGCTCCCCTTAAATG-CATTAGCCGG--TGC-CCTGTGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCA--GGGATGT-----CTGCAA---------TGG--TTTTGCGCTG-CTT-CT-AA-CCGTCT-GTTC-ATTCGGACAATTT-----CAATG-ACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTTT------------GGCCGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTTT-TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-GATCAACCTTTGC------TTTTGCTGGGTGCACTTTCCGG-----TCGACGGGTCAGCATCAATTTTGAG-CGTCGGATAAA-GTCCAGGGGAA--AGTAGCATCTTC----GGATGTGTT-ATAGCCTTT-GGTCGCATACGAC-GGTTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TACTTTGGTGCCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACCCGGA-CGC-ACAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGAGCTTTT--GCGACGGATCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTTTCCCTCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Hebeloma_fastibile             NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCCCTTTC--GGG-GGCA---TGTGCACA-CCC-ATCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-CTT-GGA-T-TGA----CTTTCCGA---GG-C------AACTCGG-------TCGG------GAGGAC-TTG-CTG-----GCATT----AGCTGGCTTTCCTTGCA-TTT-CC---CAGTCTATGTT---TTTTCA-TATA--CCCC-ATTG-AAT-GT-AACAGAATGT---AACATA-TTGGGCCTT-TG-TG-CC-TATAAAAA--CTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACTATTATCA--GC----TTTTGC-TG-AT-GATGGCTTGGA-TA--TGGGGG-----TTTATTTTGCTGGCTT---------CACAGAATG-TCAGCTCCCCTTAAATG-CATTAGCCGG--TNC-CCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGACAT-----CTACAATCA---TA-TGGG--TTTGCACTG-CTT-CC-AG-CCGTCT-GTTT-ACTCAGACAAT--A----CA-TG-ACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAGAANTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTCC------------GGCCGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTT--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-GATCAACC-TTGC------TTTNGCTGGGCGTACTTTCCGG-----TTTACGGGTCAGCATCAATTTTGAC-CGTTGGATAAA-GTCTAGGGGAA--TGTGGCATCTTC----GGATGTGTT-ATAGCCCTT-GGTCGCATACAAC-GGTTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TAC-TTG-TACCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACTCGGA-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGN-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGATCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGATTCCTGCCGAAGTTTCCCTTCAGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Hebeloma_crustuliniforme       NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTG--AATGAACTTGGTGTGGTTGTCGCTGGCCCTCTT--GGG-GGTA---TGTGCACA-CCT-ACCATCCTC--ATCT---CTCCACC--TGTGCACCTCTTGTAGA-TTT-GGAAT-TGA----TTATCCGA---GG-C------AACTCGG-------TCGT------GAGGAC--TG-CTAGCA----CTT----AGCTGGCTTTCTTTGCAATT--CC---AGGTCTATGTT----TTTCA-TATA--CCCC-ATTG-TAT-GT-AACAGAATGT---ATCA---TTGGGCCCT-TG-TG-CC-TATAAA---CCTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCATTATCA--AC----TTTTGC-TG-AT-AATGGCTTGGA-TG--TGGGGG-----TCTATTTTGCTGGCTTCT---------CAGATAG-TCAGCTCCCCTTAAATG-CATTAGCCGG--TGC-CCCGCGTGGA--CT---GTCTA-TTGGTGTGATAAT--TATCTACGCTA--TAGACAT-----CTRCAATCA---TA-TGGG--TTTGCGCTG-CTT-CT-AA-CAGTCT-GTTG-ATTCAGACAAT--A----CA-TG-ACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTCC------------GGCCGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTT--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-GATCAACC-TTGC------TTTTGCTGGGCGTACTTTCCGG-----TCGACGGGTCAGCATCAATTTTGAC-CGTTGGATAAA-GTCCAGGGGAA--TGTGGCATCTTC----GGATGTGTT-ATAGCCCTT-GGTCGCATACAAC-GGTTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TAC-TTG-TACCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACTCGGA-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGC-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGATCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGATCCATCTAGTAGCTGGTTCCTGCCAAAGTTTCCCTCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Gymnopilus_spectabilis         NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCGGAAGGATCATTATTG--AATAAACTTGATGTGGTTGTAGCTGACTTTCGCAAGAG-AGTA---TGTGCTCG-CCC-GTCACCTTT--ATCT---TTCCACC--TGTGCACTTTTTGTAGA-TTT-GAATTGTAG----CTTTCCGA---GG-T------AACTCGG-------TTGG------GAGGAA--TGTC---------ATT---CG-T-GGCTTTTCATGTA-ATA-CGTTCAAGTCTATGTT-----TTCA-TATA--CTCC--AAA-AAT-GT-AACAGAATGT---ATCA---TTGGGCCT--TG-TG-CC-TATAAA---CTTTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCC-TTGGTATTCCGAGGGGCATG-CCTGTTTGAGTGTCATTTAATTCT-------CAGCC-TTATTA--GC----TTTTGC-T--TCTAATGGTCTGGA-TG--TGGGGG-------TC-TTTGCTGGTTT---------CGCAAGAAA-TCTGCTCCCCTTAAATG-TATTAGCCGG--TGC-CCTACGTGGA--CT---GTCTA-CTGGTGTGATAAT--TATCTACGCCG-TTAGATGT-----CTGCTTTAA-----ATGGG---ATGCGCTG-CTT-CT-AA-TCGTCC-TTTC-A---GGACAATT-ATT-----GCACCATTTTGACCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAAGCTGGCGGTCTTT------------GGCCGTCCGCATT-GTAATCTAGAGAAGTGTT-ACCCG-CGTTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGACAATCCCGTCTTTGACACGGAC-TCCCAAGGCTT--TGTGGT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTCGTCCGGA-GATCAACC-TTGC------TTTTGCTGGGCGTACTCTCCGG-----TTGACGGGCCAGCATCAGTTTTGGC-CACTGGAAAAG-GGCGGAGGAAA--TGTGGCATCCTC----GGATGTGTT-ATAGTCTTC-CGTCGTATACAGT-GGCTGGGACTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG----------ATTTATCCAC----GTA-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACCCGAG-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGATCT-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Cortinarius_violaceus          NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCTGCGGAAGGATCATTATTG-AAATAAACCTGATA-AGTTGCTGCTGGCTCTCT--AGGG-AGCA---TGTGCACA-CTTTGTCATCTTT--ATAT---CTTCACA--TGTGCACCTCTTGTAGA-CTTTGGA-T---A---TCTTTCTGAA--TG-T------AATTCAGG------TTTT------GAGGAT--TGACTTTTT--------------GGTCTCTCCTTACA-TTT-CC---AAATCTATGTT---CCTTCA-TATA--CACT-TATGTTAT-AG-AATGTAATAA---------AATAGGCCTTTTT-TG-CCTTACAAAAA--CCTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCC-TTGGTATTCCGAGGAGTATG-CCTGTTTGAGTGTCATTAATATAT-------CAACCTCTTCAA--GC----TTTTGCTTG-TC-GAGTGTTTGGA-TT--TGGGG----------TTGTGCTGGTCTTATTT----TCT-GAAGG-TCAGCTCCCCTGAAATG-TATTAGCAGA---AC-AATTTGTTGA--CC---GTTCA-TTAATGTGATAAC--TATCTACATTA-TTGA-TGT---------GTG---------AGGCAGTAGTTCAG-CTT-CTTAA-CAGTCC-ATTG-ACTTGGACAA---A----TTTTCATTAATGTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGTCAGTCTTTT-----------GGCTGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--GTAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTT--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGACCGGG-GATCAACCCTTGC------TTTTGCTGGGTGTACTTTCTGG-----TTGATGGGTCAGCATCAATTTTGAC-CATTGGAAAAA-GATTAGGGGAA--TGTGGCATCTTT----GGATGTGTT-ATAGCCTCT-GGTTGTATACAAT-GGTTGAGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TT--TTT-AACCAC----GTA-CGTGC-TTAGGATGTTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATACCTGCGAGTGTTTGGGTGGA--AAACCCGAG-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGTTCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAACTCAT---ATCAGATTTATGTGGTAAAGCGAATGATTAGAGGCCTTGGGGTTGAAACAACCTTAACCTATTCTCAAACTTTAAATATGTAAGAACAAGCTGTCTCTTGGTTGGACTGCTTGGCGATTGAGAGTTTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Cortinarius_brunneus           NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCGGAAGGATCATTATTG-AAATAAACCTGATG-GGTTGTTGCTGGCTCTCT--AGGG-AGCA---TGTGCACA-CCTTGTCATCTTT--ATAT---CTCCACC--TGTGCACCTTTTGTAGA-CATC---------------------------------------------------------------------------------------------TTTCCAGGTG-------------TCTATGTTGATTCTTCA-TTTA--CCCC-AATG-TAT-GTCAATAGAATGT-----------------------TG-TGTCCATAA----TATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAAT-GTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAATATTATATAT--CAAAC-CCTCTT--------------TTG-TTGAGTGGTTTGGA-TG--TGGGG------------TTGCTGGCCTCTT---------GAAGGGGTCAGCTTCCCTGAAATG-CATTAGCAGA---AC-AGCCTGTT----CG---TTCCA-TTGGTGTGATAAC--TATCTACGCTA-TTGAATGA--------------------TGAAGGCAAGTTCAG-CTTTCT-AA-CCGTCT--------TTGGACAA----TTTATCATC-TATATGTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAGCAAGAATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTTTT-----------GGCTGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCATGTACAAGTCTCCTGGAATGGAGCGTC--GTAGAGGGTGAGAATCCCGTCTTTGACATGGAC-TGCCAGGGCTTT-TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCACGTCGACCAGG-GATCAACCC-TGC------TTTTGCTTGGTGCACTTCCTGG----TTTGATGGGTCAGCATCAATTTTGAC-CATTGGAAAAA-GATCAAGGGAA--TGTGGCATCTCT----GGATGTGTTTATAGCCCTT-GGTCACATACAAT-GGTTGGGATTGAGGAACTCAGCAC--GCCC-------------------------TT------------GTGGAGTGC-TTAGGATGCTGATAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACCCGAG-CGC-GTAATGAAAGTGAAA-------GGTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGTTCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAATCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTTTCCCTCAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Anamika_indica                 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTATTG--AATGAACTTGGTGTGGTTGTTGCTGGCTCCCTC--GGG-GGCA---TGTGCACA-CCT-GCCATCCTC--ATCT---TTCCACC--TGTGCACGTTTTGTAGA-TTT-GGA-T-TGA----CTTTCTGA---GG-T------AACTCAG-------TCGG------GAGGAT--TG-CTAG----TGT-------CCTGGCTTTCCTTGTA-TTT-CC---AAGTCTATGTT----TTTCA-TATA--CCCC-ATTG-CAT-GT-GACAGAATGT---ATCA---TTAGGTCTT-TG-TG-CC-TATAAAA---TCTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACCCTTATTA--GC---TTTATGT-CA-AT-AATGGCTTGGA-TG--TGGGGG----TATCTTTTTGCTGGCTTCTTT------CTAGATGG-TCAGCTCCCCTAAAATG-CATTAGCTGG--TGC-CCCACGTGGA--CTT--GTCTA-TTGGTGTGATAAT--TATCTACGCCA--TGGATGT-----CTACACTTA---TA-TGGG--TTTGCATTG-CTT-CT-AA-CTGTCT-GTTC-ATTCAGACAAT--A----CA-TG-ACCATTTGACCTCAAATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTCC------------GGCCGTCCGAGTT-GTAATCTACAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TACCAGGGCTC--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-GATCAACC-TTGC------TTTTGCTGGGCGTACTTTCCGG-----TTGACGGGTCAGCATCAATTTTGAC-CATTGGATAAA-GTCTAGAGGAA--TGTGGCATCTTC----GGATGTGTT-ATAGCCTTT-GGTCGCATACAAT-GGTTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TAC-TTG-TACCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGT--AAACTCGGA-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGT-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGATCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGAC-GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTGCCNAAGTTTCCCTCANGATAGCAGAAACTCAT---TTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
		Agrocybe_praecox               NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTG--AATAAACT-GGCGTGGTTGTAGCTGGCCCTCTC--GGG-GGCA---TGTGCTCG-CCC-GTCAACTTT--ATAT---CTCCACC--TGTGCACCCTTTGTAGA-CCT-GGACGATAA---CTTTTCCGA---GT-G----CAAACTCGGG------TCGG------GAGGAC--TG-CTGGC---TCTCA-CGAGTC-GGCTTTCCTTGTA--TT-ATCC-AGGCCTATGTT----ATTCA-CATA--CCCC-AAAG-AAT-GT-AACAGAATGT---ATCA--TTATGGCCT--TG-TG-CC-TATAAA---CTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAAT-CATCGAATCTTTGAACGCACCTTGCGCTCC-TTGGTATTCCGAGGAGCATG-CCTGTTTGAGTGTCATTAAATTCT-------CAACC-TTATCA--GC----TTTTGC-TG-AT-AATGGCTTGGA-CT--TGGGGG-------TCTTTTGCTGGCTTT-----------CATTAG-TCTGCTCCCCTTAAATG-TATTAGCTGG--CGCCCCGCAGTGGA--CC---GTCTA-TTGGTGTGATAAT--TATCTACGCCG--TGGATGT-----CTGCTTTCA----A-TGGGTCTTTGCGCTG-CTT-CA-AA-CCGTCC--------TCGGACAAA-----CAAA-TG-ACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAAAGCTCAAATTTAAAATCTGGCGGTCTCT------------GGCCGTCCGAGTT-GTAATCTAGAGAAGTGTT-ATCCG-CGCTGGACCGTGTACAAGTCTCCTGGAATGGAGCGTC--ATAGAGGGTGAGAATCCCGTCTTTGACACGGAC-TGCCAGGGCTT--TGTGAT-GCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGA--GACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAG-AACTTTGGAAA-GAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTC-AGTCGCGTTGGCCGGG-AATCAACC-TTGC------TTTTGCTGGGCGTACTTTCCGG-----TCGACGGGTCAGCATCAATTTTGAC-CGTTGGATAAA-GTCTAGAGGAA--TGTGGCATCTTC----GGGTGTGTT-ATAGCCTCT-GGTCGCATACAAC-GGTTGGGATTGAGGAACTCAGCAC--GCCG-CAAGGC---CG-GG------TAC-TCG-TACCAC----GTT-CGTGC-TTAGGATGCTGGCAT--AAT-GGCTTTAATCGACCCGTCTTGAAACACGGACCAAGGAGT-CTAACATGCCTGCGAGTGTTTGGGTGGA--AAACCCGAG-CGC-GTAATGAAAGTGAAA--------GTTGAGATCCC-TGTCGC-GGGG--AGCATCGACGCCCGGACCAGACCTTTT--GTGACGGNTCC-GCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 2432 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
CHARSET ITS = 1 - 859 ; 
 CHARSET LSU = 860 - 2432 ; 
 CHARPARTITION ITS_vs_LSU = ITS: 1 - 859 , LSU: 860 - 2432 ; 
 USERTYPE 2_1 ( STEPMATRIX ) = 4 
 A C G T 
 . 2 1 2 
 2 . 2 1 
 1 2 . 2 
 2 1 2 . 
 ; 
 
 OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 EXSET * dontwant = 1 - 62 80 - 92 97 - 99 108 - 112 122 123 128 - 139 157 - 195 203 - 209 214 - 219 225 - 251 265 - 274 286 - 291 295 301 - 306 311 315 318 329 - 348 351 354 363 - 367 495 516 541 - 547 560 561 564 - 571 577 580 592 - 596 602 - 642 660 671 672 687 - 693 713 714 726 727 735 - 763 770 774 - 780 787 - 796 803 - 924 991 - 1003 1351 - 1356 1379 - 1383 1447 - 1450 1530 - 1535 1539 1543 1550 - 1553 1909 - 2432 ; 
 END;