NEXUS
[File created by TreeBASE:  7/26/07  21:00:09]
[Matrix accession#: M1121]

BEGIN TAXA;
	TITLE M1121;
	DIMENSIONS  NTAX=10;
	TAXLABELS
		Lophodermium_pinastri	Spathularia_flavida_137	Spathularia_flavida_95	Spathularia_cf_flavida_214	Spathularia_cf_flavida_138	Cudonia_lutea_225	Cudonia_lutea_164	Cudonia_lutea_139	Cudonia_sichuanensis_96	Cudonia_sichuanensis_187
	;
END;

BEGIN CHARACTERS;
	TITLE M1121;
	DIMENSIONS NCHAR=1765;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Lophodermium_pinastri            AGGTGAACCTGCGGGAAGGATCATTAAAGAATAAACGGGCCTCCGGGCCCCCTATTCTCACCCTTTGCCTACC-ATACATTGTTGCCTTGGC--GCTTT-----GC--GCCAGTGGA-CAGAAACCCTTGAATCATTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTTCGAGCGTCATTACAACCCTCAAGCTCCGCTTGGTGTTGGGCTCGCCCTCTAGGGCTTGCCTCAAAATCAGTT-GGCGGCCACAGCCCGACCTCTA-GCGCAGTAC--TACTCGTCGCTGGAAGGA-GAGGCCTAG-GCGCTATAGACAACCCCCTTT-------TTTAC-AAGGTTGACCTCGGATCAGGTAGGAATACCCGC---------------------------------------------------------------------------------------------------------------------GTAATTTGTAGAGGATGCTTCGGGCGCGGCTCCGGTCTAAGTTCTCTGGAACGAGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGGCCTGTGCCCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTCCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCCCTGGTGCACTCGGCGCCGCTCAGGCCAGCATCAGTTTCAGCGGTGGGATAAAGGCCTAGGGAACGTGGGTCGCCTCGGCGACCGTTATAGCCCTAGGTGCAATGCTGCCTGCTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATTTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTTAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAACTGTTGGGACCCGAAAGATGGTGAACTATGCCTAGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGGGTATAGGGGCGAAAGACTAATCGAACCATG---------AGACCTAGCTTCTAGGTGGTTGAGAGGC-CTGCGAGGCCTAGTCGCTCCGGCGGCAATACTGCAAAATTGCGGGGAC--CCTCTTAGTCCCCAGGCTACCCCCCACGCTGGAAACGGCGTGGGACGGTCACAATGCCTGGGGTTGAG--CGATCCGCAGCCCAGGCCTAAGGCGCGCTGC---------GCTACGGGCTGGGTTCATCGACTAGATGGCAGTGGGTGTGCAACGC--CTAAGGGATAGTCAGGCTGTAACAGCAATGGTACAGGCGCTACGCTAGTAGCTGGTTCACGCCGAAGTTT-CCCTCAGGATAGCAGTGTTGTATTCAGTT
		Spathularia_flavida_137          AGGTGAACCTGCGG-AAGGATCATTACAGAATCTAGGCTTCACCG----CCATATTCTCACCCCTTGTATACCTGTACTATGTTGCCTTGGCGGGCTGTTACCAGCCTGCCAGCGGACCACAAACCCTAGAATCTCTGCCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCCAGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCAGCG-CTGTCTGACCCCTAAGCGTAGTAA--TACACCTCGCTTTTGGGC-GCTGGATGGAGGCCTGCTATGAACCCCCCAT------TTTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCG-AGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTGCAGAGCCCGCATTGTAATTTGTAGAGGATGCTTCAGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGGACCTATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGCCGTAATGGTTGTAAGCGACCCGTCTTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTG-TAAACCCATA-GCGTAATGAAAGTGAACGGAGGTGAGAACCCCTTAAGGGTGCCATCATCGACCGATCCTTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAACCATTGAGAACAGAAAACTTCGCTATTAGGTGGTTGAGAGGCCCTGCAAGGCCTAGTCGCTTCGGCGGCAACACTGTAAAACTGCGGGGACAGCTCCCTAGACACAGGCTACTACAGCGGGCTCGAAAGGGCTCGCCACAGTCACAACGCCTGGCGTCTGAGCCGATCCGCACCCTCTGCCTACGGCCCCCTACCC-GGTGGTGCTATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCACAGCGCCTAAGGTATAGTCAGACTGCAGCG-GCACGCTGCAGGTGAATCGCTAGTAGCTGGTTCACGCCGAAGTTT------------------------------
		Spathularia_flavida_95           AGGTGAACCTGCGG-AAGGATCATTACAGAATGTAGGCCTAACCG----CCCAATTCTCACCCCATGCATACCTGTACTATGTTGCCTTGGCAGGCTGTTGCCAGCCTGCCAGTGGACCACAAACCCTAGAATCTCTGCTGTCTGAGCACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCCCGCGTGGTCTTGGGCTCGCCCTGCAGGGCCTGCCTCAAAGTCAGT--GGCAGCG-CTGTCTGACCCCTAAGCGTAGTAA--TACATCTCGCTTCTGGGC-GCTGGATGGAGGCCTGCCATGAACCCCCCAC------TTTTAC-A-GGTTGACCTCGAATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTGCAGAGCCCGCGTTGTAATTTGTAGAGGATGCTTCAGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAACCATTGACC-----AAGCCTTGCTATTAGGTGGTTGAGAGGCCCTGTGAGGCCTAGTCGCTTTGGCGGCAACACTGTAAAACTGCGGGGACAGCTCCATAGACACAGGCTACTCCAGCGGGCTCGAAAGGGCTCGCCACAGTCACAACGCCTGGCGTCTGAGCCGATCCGCAACCTCTGCCTACAGCCCACCTCCCCGGTGGTGCGATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCCCCGCGCCTAAGGGATAGTCAGACTGCAGCGTGCCCGCTGCAGGTGAATCGCTAGTAGCTGGTTCACGCCGAAGTTT------------------------------
		Spathularia_cf_flavida_214       AGGTGAACCTGCGG-AAGGATCATTAAAGAATGTAGGCCTCACAG----CCGTATTCTCACCCTTTGTATACCAATACCGCGTTGCCTTGGCAGGCTGTTACAGGCCTGCCAGTGGATCATAAACCCTAGAATCTCTGCTGTCTGAGTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTTGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCACC-GTCTGACCCCTAAGCGTAGTAACAT-CACCTCGCTTCTGGGC-GCTGGATGGAGGCTTGCCATCAAACCCCCCCCCcAATTTTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCCCTTTCAGGGTCCGCGTTGTAATTTGTAGAGGATGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCT-AGGAAATTAAGCTTTTTTTTGAAG
		Spathularia_cf_flavida_138       AGGTGAACCTGCGG-AAGGATCATTAAAGAATGTAGGCCTCACAG----CCGTATTCTCACCCTTTGTATACCAATACCGCGTTGCCTTGGCAGGCTGTTACAGGCCTGCCAGTGGATCATAAACCCTAGAATCTCTGCTGTCTGAGTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTTGCGTGGTCTTGGGCCCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCACC-GTCTGACCCCTAAGCGTAGTAACAT-CACCTCGCTTCTGGGC-GCTGGATGGAGGCTTGCCATCAAACCCCCCCCCCAATTTTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCCCTTTCAGGGTCCGCGTTGTAATTTGTAGAGGATGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCC--------------------------
		Cudonia_lutea_225                AGGTGAACCTGCGG-AAGGATCATTACAGAATCTAGGCTTTACCG----CCATATTCTCACCCTTTGAATACGTATACTATGTTGCCTTGGCAGGCTGTTGCCAGCCTGCCGGTGGA-CCTCAACTCTGGAATCTTTGCCGTCTGAGTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTAGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCGTC-GTCTGACCCCTAAGCGTAGTAAAATACACCTCGCTTCTGGGC-GTTGGAGAGAGGCTTGCTGTGAACCCCCAAC-------ACTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCCACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTTCAGAGCCCGCATTGTAATTTGTAGAGGATGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGCGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTTTGCGCGGCGTCGATCAACCTGGGTTTTCCCTGGTGCACTCGGCGCCGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCG-GCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCTCAGGA--------------------
		Cudonia_lutea_164                AGGTGAaCCTGcGG-AAgGATCATTaCAGATTcTAGGCTTTACCG----CCATATTCTCACCCTTTGAATACGTATACTATGTTGCCTTGGCAGGCTGTTGCCAGCCTGCCGGTGGA-CCTCAACTCTGGAATCTTTGCCGTCTGAGTACTATACAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTAGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCGTC-GTCTGACCCCTAAGCGTAGTAAAATACACCTCGCTTCTGGGC-GTTGGAGAGAGGCTTGCTGTGAACCCCCAAC-------ACTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTTCAGAGCCCGCATTGTAATTTGTAGAGGATGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGCGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTTTCCCTGGTGCACTCGGCGCCGCTCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCTCAGGAA-------------------
		Cudonia_lutea_139                AGGTGAACCTGCGG-AAGGATCATTAAAGAATTTAGGCTTTACCG----CCATATTCTCACCCTTTGTATACGTATACTATGTTGCCTTGGCAGGCTGTTACTAGCCTGCCGGTGGA-CCTCAACTCTAGAATCTTTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTAGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCGTC-GTCTGACCCCTAAGCGTAGTAAAATACACCTCGCTTCTGGGCTGTTGGATAGAGGCTTGCTGTGAAACCCCCAAC------TTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA------------GGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTTCAGGGCCCGCATTGTAATTTGTAGAGGATGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGCTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCTCAGGAAAA-----------------
		Cudonia_sichuanensis_96          AGGTGAACCTGCGG-AAGGATCATTAAAGATTCTAGGCTTAACCG----CCATATTCTCACCcTTTGTATACCTATACCATGtTGCCTTGGCAGGCTGTCACCAGCCTGCCGGTGGA-CTTCAACCCTAGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTCGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCG-CTGTCCGACCCCTAAGCGTAGTAAA-TACACCTCGCTTTTGGGC-GCTGGATGGAGGCCTGCCATGAACCCCCCAC-------TTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG-AACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTTCAGAGCCCGCATTGTAATTTGTAGAGGATGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCGGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCC-------------------------
		Cudonia_sichuanensis_187         AGGTGAACCTGCGG-AAGGATCATTAAAGAATCTAGGCTTAACCG----CCATATTCTCACCCTTTGTATACCTATACCATGTTGCCTTGGCAGGCTGTCACCAGCCTGCCGGTGGA-CTTCAACCCTAGAATCTCTGCTGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGGGGGCATGCCTGTT-CGAGCGTCATTACAACCCTCACGCCTCGCGTGGTCTTGGGCTCGCCCTGTAGGGCCTGCCTCAAAGTCAGT--GGCGGCG-CTGTCCGACCCCTAAGCGTAGTAAA-TACACCTCGCTTTTGGGC-GCTGGATGGAGGCCTGCCATGAACCCCCCAC-------TTTAC-A-GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA------CCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAAGCT-GGCTCTTTCAGGGCCCGCGTTGTAATTTGTAGAGGATGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCCCTGGTGCACTCGGCGCTGCTCAGGCCAGCATCAGTTTCGGCGGTTGGATAAAGGCCTAGGGAACGTGGGTTACTTCGGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTCGGCTA-GGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGTAGCTGGTTCACGCCGAAGTTT-CCCTCAGGAAA------------------
	;
END;

BEGIN ASSUMPTIONS;
charset ITS = 1 - 513 ; 
 charset 25S = 514 - 1765 ; 
 charset intron_exclude = 1419 - 1765 ; 
 END;