NEXUS [File created by TreeBASE: 7/26/07 21:00:09] [Matrix accession#: M1122] BEGIN TAXA; TITLE M1122; DIMENSIONS NTAX=23; TAXLABELS Leotia_viscosa Stictis_radiata Sclerotinia_veratri Geoglossum_glabrum Lophodermium_pinastri Spathularia_flavida_135 Spathularia_flavida_137 Spathularia_flavida_95 Spathularia_flavida_93 Spathularia_cf_flavida_138 Spathularia_cf_flavida_214 Spathularia_velutipes_AF113736 Spathularia_velutipes_AF113735 Spathularia_velutipes_AF113734 Spathularia_velutipes_AF107554 Spathularia_velutipes_AF279411 Cudonia_circinans_JP232 Cudonia_circinans_AF107553 Cudonia_lutea_225 Cudonia_lutea_139 Cudonia_lutea_164 Cudonia_sichuanensis_187 Cudonia_sichuanensis_96 ; END; BEGIN CHARACTERS; TITLE M1122; DIMENSIONS NCHAR=1252; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Leotia_viscosa ------------------------------------------------GACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-TCTGGCCC--ACGTG-GCCCGAGTTGTAATTTGTAGAGGA-TGCTTCGGGCGTGGT-CCGGCCTAAGTCCCTTGGCACAGGGCGTCATAGAGGGTGAGAACCCCGTATGTGGCCGGGTGCCTAGGCCCGTGTGAAGCTCCGTCGACGAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGACCAGACTT-GGGCGCGGCTGATCATCCGGCGTTCTCG-CCGGTGCACTCG-GCCGCGTGCCAGGCCAGCATCGGTTCCGGCGGCCAGACAAAGGCCGGGCGAACGTGG--CTCCCCC-AGGGAGTGTTATAGCGCCCGGCGCCATGTGGCCTGCTGGGAACGAAGACCGCGCCTCT--GGCT-AAGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Stictis_radiata -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGCG?CAACAGCTCAAATTTGAAATCT-GGCTTTT-TGGG-GCCCGAGTTGTAATTTGCAGAGGA-TGTTTCGGGTGCGGCACCGTTCTAAGTTCCTTGGAACAGGGCGTCATAGAGGGTGAGAATCCCGTACGTGACCGGTCGCCAAC-CCCATGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTC-GCCCGGGGGTGATCAGCCTACCTTCTGG-CAGGTGTACTTT-CCCCCGG-CCGGGCCAGCATCGGTTCGGGCGGCCGGATAAAGGTTTCGGGAACGTAGC-TCCTCTC-GGGGAGTGTTATAGCCCGGGGCGTAATGCGGCCAGCCTGGACCGAGGACCGCGCTTT---TGCTTAGGATGCTGGC-ATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Sclerotinia_veratri ------------------------------------------------GAATTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAA-TCTGGCCCTTTCAGG-GTCCGAGTTGTAATTTGTAGAAGA-TGCTTCGGGTGTGGTCCCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGGTACCTACGCTCATGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCCTAGTTGATCATCCAGGCTTCTGC-CTGGTGCACTCG-ATTAGGC-TCAGGCCAGCATCGGTTTGGGTGGTTGGATAAAGGCTTGGGGAACGTAGC-TC-CTTC-GGGGGGTGTTATAGCCCCAGGTGCAATGCAGCCTACCTGGACCGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Geoglossum_glabrum -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGTGGCAACAGCTCAAATTTGAAA-TCTGGTTCTTCTGGG-GCCCGAGTTGTAATTTGTAGAGGAGTTCTTCGGGTTTGGCCCCGGCCTAAATTCCTTGGAACAGGATGTCATAGAGGGTGAGAATCCCGTATGTGGCTGGAGGTCTATACCCATGTGAAGTTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAGTTTCATCTAAAGCTAAATACTGGCGGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCGACCAGACTT-GCCCTTAGTTGATCAACCGGTGTTCTTCACCGGTGCACTCG-GCTAAGG-TCAGGCCAGCATTGGTTTAGGCGGTTGGAAAAAGATCATAGGAATGTGGC-T?CCTTCTGGGGAGTGTTATAGCCTGTGGTGTCATGCAACCAGTTTAGACCGAGGACCGCGCCTTTGTGCTT-AGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Lophodermium_pinastri ---------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCTCCGGTCTAAGTTCTCTGGAACGAGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGGCCTGTGCCCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTCCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCCGC-TCAGGCCAGCATCAGTTTCAGCGGTGGGATAAAGGCCTAGGGAACGTGGG-TCGCCTC-GGCGACCGTTATAGCCCTAGGTGCAATGCTGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATTTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTTAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAACTGTTGGGACCCGAAAGATGGTGAACTATGCCTAGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGGGTATAGGGGCGAAAGACTAATCGAACCAT-GAGAC-------CTA-GCTTCTAGGTGGTTGAGAGGCCTGC-GAGGCCTAGTCGCTCCGGCGGCAATACTGCAAAATTGCGGGGAC--CCTCTTAGTCCCCAGGCTACCCCCCACGCTGGAAACGGCGTGGGACGGTCACAATGCCTGGGGTTGAG--CGATCCGCAGCCCAGGCCTAAGGCGCGCT---------GCGCTACGGGCTGGGTTCATCGACTAGATGGCAGTGGGTGTGCA--ACGCCTAAGGGATAGTCAGGCTGTAACAGCAATGGTACAGGCGCTACG Spathularia_flavida_135 --------------------------------------TTACCGTTTGAACTTAAGCATATCAATAAGCGGAGGAAAAGaAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTGCAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCAGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGGACCTATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGCCGTAATGGTTGTAAGCGACCCGTCTTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTT-GGGTGTTAAACCCATAAGCGTA-TGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAACCATTGAGAACAGAAAACTTCGCTATTAGGTGGTTGAGAGGCCCTGCAAGGCCTAGTCGCTTCGGCGGCAACACTGTAAAACTGCGGGGACAGCTCCCTAGACACAGGCTACTACAGCGGGCTCGAAAGGGCTCGCCACAGTCACAACGCCTGGCGTCTGAGCCGATCCGCACCCTCTGCCTACGGCCCCCTACCC-GGTGGTGCTATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCACAGCGCCTAAGGTATAGTCAGACTGCAGCGGGCACGCTGCAGGG------ Spathularia_flavida_137 ---------------------------------------------------TTAAGCATATCAATAAGCG-AGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTGCAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCAGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGGACCTATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGCCGTAATGGTTGTAAGCGACCCGTCTTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGKTAAACCCATA-GCGTAATGAAAGTGAACGGAGGTGAGAACCCCTTAAGGGTGCCATCATCGACCGATCCTTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAACCATTGAGAACAGAAAACTTCGCTATTAGGTGGTTGAGAGGCCCTGCAAGGCCTAGTCGCTTCGGCGGCAACACTGTAAAACTGCGGGGACAGCTCCCTAGACACAGGCTACTACAGCGGGCTCGAAAGGGCTCGCCACAGTCACAACGCCTGGCGTCTGAGCCGATCCGCACCCTCTGCCTACGGCCCCCTACCC-GGTGGTGCTATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCACAGCGCCTAAGGTATAGTCAGACTGCAGCG-GCACGCTGCAGGTGAATCG Spathularia_flavida_95 ---------------------------------------------------TTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTGCAGA-GCCCGCGTTGTAATTTGTAGAGGA-TGCTTCAGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCGGC?GCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTC?TTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAACCATTGACCAAGC----CTT-GCTATTAGGTGGTTGAGAGGCCCTGTGAGGCCTAGTCGCTTTGGCGGCAACACTGTAAAACTGCGGGGACAGCTCCATAGACACAGGCTACTCCAGCGGGCTCGAAAGGGCTCGCCACAGTCACAACGCCTGGCGTCTGAGCCGATCCGCAACCTCTGCCTACAGCCCACCTCCCCGGTGGTGCGATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCCCCGCGCCTAAGGGATAGTCAGACTGCAGCGTGCCCGCTGCAGGTGAATCG Spathularia_flavida_93 ----------------------------------------------TGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTTAGG-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCAGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTGTAATATTTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTCAGGGTGC-ATCATCGACCGATCCT-GAAGTCTTCGGATGGATTTGAGTAAGAGCATAACTATTGCGACCCGAAAGATGATGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGAAAGACTAATCGAATCATTGAG---------ATAAGCTATTAGGTGATTGAGAGGCTTGGAAAAGCCTAGTCGCTCCCGCGGCAACACTGTAAAACTGCGGGGACAGCTCTATAGACACAGGCTACTACAGCAGGCTCGAAAGGGCTTGCCACAGTTACAACGCCTGGTGCCTGAGCCAATCCGCAACCTCCGCCTCCAGCCCACCTACCCGGTGGTGCGATGGCGCAGGCCCATCGACTAGATGACAGTGGGTGCTCACAGCGCCTAAGGTATAGTCAGACTGCAGCTGACACGCTGTAGGTGAATCG Spathularia_cf_flavida_138 -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCCCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Spathularia_cf_flavida_214 ------------------------------------------------AACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCACCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCCCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Spathularia_velutipes_AF113736 -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCCCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Spathularia_velutipes_AF113735 -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGGGTTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Spathularia_velutipes_AF113734 -----------------------------------------------GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Spathularia_velutipes_AF107554 GACTCGCTTGGCACCTTACGAGAAATCAAAGTCTTTGGGTTCT????GAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCCCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Spathularia_velutipes_AF279411 ------------------------------------------------------------------------------------------------------------------------AACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGG-GTCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGCGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAGCCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGTTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGATCTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAACCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_circinans_JP232 ------------------------------------------------------------------------------------------------------------------------AACAGCTCAAATTTGAAA-GCTGGCTCTTTTAGG-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GTGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTTGGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_circinans_AF107553 GACTCGCTTGGCACCTTACGAGAAATCAAAGTCTTTGGGTTCT????GA-CTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTTAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCAGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCCGC-TCAGGCCAGCATCAGTTTCGGCGGTTGGATAAAGGCCTAGGGAACGTGGGGTTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCTTAGGATGCTGGC-GTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Cudonia_lutea_225 -------------------------------------TTTACCCG?TGAACTTAAGCATATCCATAAGCGGAGGAAAAGAAACCCACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGCGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTTTGCGCGGCGTCGATCAACCTGGGTTTTCC-CTGGTGCACTCG-GCGCCGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCG-GCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_lutea_139 ----------------------------------------------------------------------------------------GGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGG-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTAGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGCTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_lutea_164 --------------------------------------------TTTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGCGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTTTCC-CTGGTGCACTCG-GCGCCGC-TCAGGCCAGCATCAGTTTCAGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTTAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_sichuanensis_187 ----------------------------------------------------------------------------------CCAaCAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGG-GCCCGCGTTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCGGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cudonia_sichuanensis_96 -------------------------------------------------ACTTAAGCAT-TCAATAA-CGGAGGAAAAGAA-CCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAA-GCTGGCTCTTTCAGA-GCCCGCATTGTAATTTGTAGAGGA-TGCTTCGGGTGCGGCGCTGGTCTAAGTTCTTTGGAACAAGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCTGCCTGTGCCTGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGTACTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTT-GCGCGGCGTCGATCAACCTGGGTTCTCC-CTGGTGCACTCG-GCGCTGC-TCAGGCCAGCATCAGTTTCGGCGGTTGGATAAAGGCCTAGGGAACGTGGG-TTACTTC-GGTGACTGTTATAGCCCTAGGTGCAATGCAGCCTGCTGGGACTGAGGACCGCGCTTC---GGCT-AGGATGCTGGC-GTAATGGTTGTAAGCGACCCGTCTT-GAAACACGGACCAAGGAGTCTAACATCTATGCGAGTTTTTGGGTGTCAAACCCATAAGCGTAATGAAAGTGAACGGAGGTGAGAACCC-TTAAGGGTGC-ATCATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGATGATCTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGAAAGACTAATCGAATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN ASSUMPTIONS; charset intron_excluded = 962 - 1252 ; END;