NEXUS [File created by TreeBASE: 7/26/07 21:00:53] [Matrix accession#: M1220] BEGIN TAXA; TITLE M1220; DIMENSIONS NTAX=16; TAXLABELS Armillaria_hinnulea_CMW4983 Armillaria_hinnulea_CMW4990 Armillaria_South_America_Isolate_CMW8879 Armillaria_South_America_Isolate_CMW8876 Armillaria_South_America_Isolate_CMW5446 Armillaria_luteobubalina_CMW4977 Armillaria_luteobubalina_CMW5704 Armillaria_limonea_CMW4678 Armillaria_limonea_CMW4680 'Armillaria Indo-Malaysia Isolate CMW4143' 'Armillaria Indo-Malaysia Isolate CMW4145' 'Armillaria Indo-Malaysia Isolate CMW3951' 'Armillaria novae-zelandiae CMW5450' 'Armillaria novae-zelandiae CMW5448' 'Armillaria novae-zelandiae CMW4964' 'Armillaria novae-zelandiae CMW4722' ; END; BEGIN CHARACTERS; TITLE M1220; DIMENSIONS NCHAR=1018; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Armillaria_hinnulea_CMW4983 GAGAGCTGTTGCTGACCTGTT-AAAGGTATGTGCACGCTCAAAGTGTTGCGTTCTATTCTTT-CCACCTGTGCACCTTTGTAGACTTGGTTA----ACT-TCGCTCTCGAGCGGTTAGAAGGGTTGCTTTCGAGCTCCCTTTGTCT-ATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTC----TATGTCTATA-----------------------------TAATCTCTTGTATGTCTAGAATGTCTTGT------------------TTATGGGACGCAA--GTCCTTTAAATCTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCCCCTTCTTTTACTAG-AGT-GTGGC------------------GGATTGGACA-TGGGGGTT-GCTGGTTTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGACTTT--GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTAGTTGGGTCGGAATAC--GAGTCA-TACAGTGGTAACTAATCAGGCTTTCGAGTCTGGCTTAGTATCGGTTTTGGGAGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTGCGGGGAGATACTTG-TCCGATTTCTAAGAGAGGATTTGCTTAGTGCAAGCTTAGCTTTCCTTGATTTTTCCCTTTGACTTTGTAGAAGGATTCAGCTTCTAACCGTCCATTGACTTGGACAATTTATTGAC Armillaria_hinnulea_CMW4990 GAGAGCTGTTGCTGACCTGTT-AAAGGTATGTGCACGCTCAAAGTGTTGCGTTCTATTCTTT-CCACCTGTGCACCTTTGTAGACTTGGTTA----ACTTTCGCTCTCGAGCGGTTAGAAGGGTTGCTTTCGAGCTCCCTTTGTCT-ATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTC----TATGTCTATA-----------------------------TAATCTCTTGTATGTCTAGAATGTCTTGT------------------TTATGGGACGCAA--GTCCTTTAAATCTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCCCCTTCTTTTACTAGGAGT-GTGGC------------------GGATTGGACA-TGGGGGTT-GCTGGTTTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGACTTT--GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTAGTTGGGTCGGAATAC--GAGTCA-TACAGTGGTAACTAATCAGGCTTTCGAGTCTGGCTTAGTATCGGTTT-GGGAGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTGCGGGGAGATACTTG-TCCGATTTCTAAGAGAGGATTTGCTTAGTGCAAGCTTAGCTTTCCTTGATTTTTCCCTTTGACTTTGTAGAAGGATTCAGCTTCTAACCGTCCATTGACTTGGACAATTTATTGAC Armillaria_South_America_Isolate_CMW8879 GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTCTTTGTGTTGCGTTTTATTGTTTTCCCCCTGTGCACCTTTGTAGACTTGGTTAAGG--ATGTCGCTGTTGAGTGGTTAGAAGGGTTGCTCTTGAGCTCCCTTTGGTT--------TCGAACGGTTGCTTTGTTAGCTTCCTTTGATTTCGAATGGTTGCTTTGTTAGCTCCCTTTGATTTCGAACGGTTGCTTTGTTAGCTCCCTTTGAATT--------------------------------GTTTTCACTCTGAAGTGGTTAGAAGGGGTTGCTCTCGAGCT-CCCTTT------------------------------CTTTGTCTACCAAGTCTATGTCTATAATCTCTTGTATGTCTAGAATGTCTTGTTTATTGGATGCTTGCGTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCGCCTTCTTTTACTAGGAGTTGCGAT------------------GGATTGGATA-TGGGGGCTTGCCGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTGGTTGAGTG-GAGTACACAAGTCC-TACAACAAGTA------------------------------------------------------TCCTT-------------------------ACTTGCTCTC-----------------------------------------------------TTTGACTTTGTATAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC Armillaria_South_America_Isolate_CMW8876 GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTCTTTGTGTTGCGTTTTATTGTTTTCCCCCTGTGCACCTTTGTAGACTTGGTTAAGG--ATGTCGCTGTTGAGTGGTTAGAAGGGTTGCTCTTGAGCTCCCTTTGGTT--------TCGAACGGTTGCTTTGTTAGCTTCCTTTGATTTCGAATGGTTGCTTTGTTAGCTCCCTTTGATTTCGAACGGTTGCTTTGTTAGCTCCCTTTGAATT--------------------------------GTTTTCACTCTGAAGTGGTTAGAAGGGGTTGCTCTCGAGCT-CCCTTT------------------------------CTTTGTCTACCAAGTCTATGTCTATAATCTCTTGTATGTCTAGAATGTCTTGTTTATTGGATGCTTGCGTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCGCCTTCTTTTACTAGGAGTTGCGAT------------------GGATTGGATA-TGGGGGCTTGCCGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTGGTTGAGTG-GAGTACACAAGTCC-TACAACAAGTA------------------------------------------------------TCCTT-------------------------ACTTGCTCTC-----------------------------------------------------TTTGACTTTGTATAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC Armillaria_South_America_Isolate_CMW5446 GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTCTTTGTGTTGCGTTTTATTGTTTTCCCCCTGTGCACCTTTGTAGACTTGGTTAAGG--ATGTCGCTGTTGAGTGGTTAGAAGGGTTGCTCTTGAGCTCCCTTTGGTT--------TCGAACGGTTGCTTTGTTAGCTTCCTTTGATTTCGAATGGTTGCTTTGTTAGCTTCCTTTGATTTCGAATGGTTGCTTTGTTAGCTCCCTTTGATTTCGAACGGTTGCTTTGTTAGCTCCCTTTGAATTGTTTTCACTCTGAAGTGGTTAGAAGGGGTTGCTCTCGAGCT-CCCTTT------------------------------CTTTGTCTACCAAGTCTATGTCTATAATCTCTTGTATGTCTAGAATGTCTTGTTTATTGGATGCTTGCGTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCGCCTTCTTTTACTAGGAGTTGCGAT------------------GGGTTGGATA-TGGGGGCTTGCCGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTGGTTGAGTC-GAGTACACAAGTCC-TACAACAAGTA------------------------------------------------------TCCTT-------------------------ACTTGCTCTC-----------------------------------------------------TTTGACTTTGTATAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC Armillaria_luteobubalina_CMW4977 GAGAGCTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTCAAAGTGTTGCGTTTTATTCTTTTCCCCCTGTGCACCTTTGTAGACTTGGTTAAGG--ATGTCGCTGTTGAGTG----------TTGCTCTTGAGCTCCCTTTGATT-------TTCGAAGGGTTGCTTTGTTGG---------------------------------------------------------------------------------------------------------------TTTCACTCTGAAGCGGTT-GAAGGGGTTGCTTTAGAGCTTCCCTTT------------------------------CTTTGTCTACCAAGTCTATGTCTATAATCTCTTGTATGTGTAGAATGTCTTGTTTATTGGATGCTTGCGTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTGCCTTCTTTTACTAGGAGT-GCGAT------------------GGATTGGATA-TGGGGGTTTGCTGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTGGTTGAGTC-GAGTACACAAGTCC-TACAACAAGTA------------------------------------------------------TCTTT-------------------------ACTTGCTTCG-----------------------------------------------------TTTGACTTTGTATAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC Armillaria_luteobubalina_CMW5704 GAGAGCTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTCAAAGTGTTGCGTTTTATTCTTTTCCCCCTGTGCACCTTTGTAGACTTGGTTAAGG--ATGTCGCTGTTGAGTG----------TTGCTCTTGAGCTCCCTTTG-TT-----------------------------------------------------------------------------------------------------------------------------------------GGTTTCACTCTGAAGCGGTT-GAAGGGGTTGCTTTCAAGCTTCCCTTT------------------------------CTTTGTCTACCAAGTCTATGTCTATAATCTCTTGTATGTGTAGAATGTCTTGTTTATTGGATGCTTGCGTCCTTTAAATCTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCGCCTTCTTTTACTAGGAGT-GCGAT------------------GGATTGGATA-TGGGGGTTTGCTGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTGGTTGAGTC-GAGTACACAAGTCC-TACAACAAGTA------------------------------------------------------TCCTT-------------------------ACTTG-TTCCA----------------------------------------------------TTTGACTTTGTATAAGGATTCAGCTTCTAACGGTCCATTGACTTGGACAATTTATTGAC Armillaria_limonea_CMW4678 GAGAACTGTTGCTGACCTGTGAAAGGGTATGTGCACGTTCAATGTGTTGCGTTTTATTCTTTTCCCCCTGTGCACGTTTGTAGACTTGGTTA-GGTT-TT-CGCTGTTGAGTGGTTAGAAGGGTTGCTTTCTAGCTCCCTTTAT---------------------------------------------------------------------------------------------------------------------------------------------TTTCACTCTGAAGCGGTTAGAAGGG-TTGCTCTCGAGCT-CCCTTTG----------------------------------TGTACCAAGTCTATGTCTATAATCTCTTGTATGTCTAGAATGTCTTGTTTATGGGACGCAA--GTCCTTTAAATTTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCCCCTTCTTTTACTAGGAGT-GCGGT------------------GGATTGGATA-TGGGGGTTTGCTGGTCTCT--AACGGGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTAGTTGGGTCGGAGTAC--AAGTCA-TAGAGCAAGTA------------------------------------------------------------------------TTGT-------TACTTG--CC---------------------------------------------------TCGTTTGAGTTTGTAGAAGGATTCAGCTTCTAACAGTCCATTGAGTTGGACAATTTATTGAT Armillaria_limonea_CMW4680 GAGAACTGTTGCTGACCTGTGAAAGGGTATGTGCACGTTCAATGTGTTGCGTTTTATTCTTTTCCCCCTGTGCACGTTTGTAGACTTGGTTA-G-TT-TTTCGCTGTTGAGTGGTTAGAAGGGTTGCTTTCTAGCTCCCTTTAT---------------------------------------------------------------------------------------------------------------------------------------------TTTCACTCTGAAGCGGTTAGAAGGG-TTGCTCTTGAGCT-CCCTTTG----------------------------------TGTACCAAGTCTATGTCTATAATCTCTTGTATGTCTAGAATGTCTTGTTTATGGGACGCAA--GTCCTTTAAATTTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTCGCCTTCTTTTAGTAGGAGT-GCGGT------------------GGATTGGATA-TGGGGGTTTGCTGGTATCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGAC-TTT-GGCTGCTAGGCTGTGATAATATCTACGCCTTGGTAGTTGGGTCGGAGTAC--AAGTCA-TAGAGCAAGTA------------------------------------------------------------------------TTGT-------TACTTG--CC---------------------------------------------------TCGTTTGAGTTTGTAGAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAT 'Armillaria Indo-Malaysia Isolate CMW4143' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTTAAAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGAGTTGGTTA-GG-AAA-TCGTTGTTGAGTG----------------------TTAATTCT----------------------CTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCACTCTGAAGCGGTCAGAAGGG-TTGCTGTGAAGCT-CTCTTTGTCC-------------------------------TGTACCAAGTCTATGTCTATAAACTCTTGTATGTGTAGAATGTTTTGTTTATAGGACGCAA--GTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTAAGACTTTGTTCTAA-GGATTGGATA-TGGGGGTT-GCTGGTCTCT-TGTAGAGATCAGCTCCTCTTAAATGGATTAGCAGAAACCGTTTGAC-TTAAGAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCAGGTCGGAATAC--AAGTGAAT-------------------------------CGTTGGGATCGGTTT-GGAGGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTT--GAGAGATACTTG-TCCGATTTTC----------------------------------------CAAGTGGGTTGACTTTGTAGAAGGATTCAGCTTCTAACGGTCCATTGAATTGGACAATTTATTGAC 'Armillaria Indo-Malaysia Isolate CMW4145' GAGAACTGTTGCCGACCTGTTAAAGGGTATGTGCACGTTTAAAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGAGTTGGTTA-GG-AAA-TCGATGTTGAGTG----------------------TTAATTCT----------------------CTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCACTCATCAGCGGTCAGAAGGG-TTGCTGTAAAGCT-CTCTTTGTCC-------------------------------TGTACCAAGTCTATGTCTATAAACTCTTGTATGTGTAGAATGTTTTGTTTATAGGACGCAA--GTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAG----------------------------CTAAGACTTTGTTCTAA-GGATTGGATA-TGGGGGTT-GCTGGTCTCT-TGTAGAGATCAGCTCCTCTTAAATGGATTAGCAGAAACCGTTTGAC-TTAAGAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCAGGTCGGAATAC--AAGTGAAT-------------------------------CGTTGGGATCGGTTT-GGAGGGTGCTTAACGGCTCCTTCTGTTTTCTCT-------GAGAGATACTTG-TCCGATTTTC----------------------------------------CAAGTGGGTTGACTTTGTAGAAGGATTCAGCTTCTAACGGTCCATTGAATTGGACAATTTATTGAC 'Armillaria Indo-Malaysia Isolate CMW3951' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTTTGAGTGTTGCGTTTTATTGTTTTTTCCCTGTGCACTTTTGTAGAGTTGGTTA-GG-AAA-TCGTTGTTGAGTGGTTTGAAGGGTTGCTGAAAAGCTCTCTTTGTCTAAGCTAA-----------GCTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCACTCCTCAGCGGTCAGAAGGG-TTGCTGTGAAGCT-CTCTTTGTCT----------------------------------GCCAAGTCTACGTCTATAAACTCTTGTATGTGTAGAATGTTTTGTTTATAGGACGCAA--GTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAAAGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTTTGACTTTGTGCTAA-GGATTGGATTGTGGGGGTT-GCTGGTCTCTTTGTTGAGATCAGCTCCTTTGAAATGTATTAGCAGAAACCGTTTGAC--TAAGAGTGCTAGGTTGTGATAATATCTACAGCTTGGTAGTCCAGTCGGAATAC--AAGTGAA----------------------------------------TCG-TTT-GGAGGGTGCATAACGGCTCCTTCT-----------------------ACTTG-TCCGATTTT-----------------------------------------------------CTT-GTAGAAGGATTCAGCTTCTAACGGTCCATTAAATTGGACAATTTATTGAC 'Armillaria novae-zelandiae CMW5450' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTGTGAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGACTTGGTT--------------GTTGAGTGGTTAGAAGGGTTGCTGAAAAGCTCTCTTT----------------------GCTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCGCTCTT---------GAAGGG-TTGCTGCAAAGCT-CCCTTTGCCTAGGATTTCACTAA------------GCTT-GT----CAGGTCTATGTCTATAATCTCTTGTATGTATAGAATGTGTTGTTTATAGGACGCAA--ATCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCAAAGGGCATGCCCGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTTTGCATTTGTGCTAA-GGATTGGATA-TGGGGGTT-GCTGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGTCGTT--GAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCGTGTCAGAATAC--AAGTCAA-------------------------------------GGATCGGTTC-GGAGGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTGCGGGGAGATACTTG-TCCGATTTTT-----------------------------------------------GTT-ACTT-GTAGAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC 'Armillaria novae-zelandiae CMW5448' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTGTGAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGACTTGGTT--------------GTTGAGTGGTTAGAAGGGTTGCTGAAAAGCTCTCATT----------------------GCTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCGCTCTT---------GAAGGG-TTGCTGCAAAGCT-CCCTTTGCCTAGGATTTCACTAA------------GCTT-GT----CAGGTCTATGTCTATAATCTCTTGTATGTATAGAATGTGTTGTTTATAGGACGCAA--GTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTTTGCATTTGTGCTAA-GGATTGGATA-TGGGGGTT-GCTGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGACGTT--GAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCGTGTCAGAATAC--AAGTCAA-------------------------------------GGATCGGTTC-GGAGGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTGCGGGGAGATAGTTG-TCCGATTTTT-----------------------------------------------GTT-ACTT-GTAGAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC 'Armillaria novae-zelandiae CMW4964' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTGTGAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGACTTGGTT--------------GTTGAGTGGTTAGAAGGGTTGCTGAAAAGCTCTCTTT----------------------GCTT---AGGA--------------------------------------------------------------------------------------------------------------TTTCGCTCTTGAGCGGATTGAAGGG-TTGCTGTAAAGCT-CCCTTTGCCTAGGATTTCACTTGTGCAAAGCTC--GCTTTGTGTACCAGGTCTATGTCTATAATCTCTTGTATGTATAGAATGTGTTGTTTATAGGATGCAA--GTCCTTTAAATGTTATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTTTGCATTTATGCTAA-GGATTGGATA-TGGGGGTT-GCTGGTGTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGACGTT--GAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCGGGTCGGAATAC--AAGTCAA-------------------------------------GGATCGGTTT-GGAGGGTGCTTAACGGCTCCTTCTGCTTTCTCTCTTTGTGGGGAGATACTTG-TCCGATTTTT-----------------------------------------------GTT-ACTT-GTAGAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAC 'Armillaria novae-zelandiae CMW4722' GAGAACTGTTGCTGACCTGTTAAAGGGTATGTGCACGTTGTGAGTGTTGCGTTTTATTCTTTTTTCCCTGTGCACGTTTGTAGACTTGGTT--------------GTTGAGTGGTTAGAAGGGTTGCTGGAAAGCTCTCTTT----------------------GCTT---AGGA-------------------------------------------------------------------------------------------------------------------------------TTGAAGGG-TTGCTGCAAAGCT-CCCTTTGCCTAGGATTTCACTTGTGCAAAGCTCGCGCTTTGTGTACCAGGTCTATGTCTATAATCTCTTGTATGTATAGAATGTCTTGGTTATAGGACGCAA--GTC-TTTAAATGGTATACAACTTTCAACAACCGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAAGC---------------------------CTTTGCACTTGTGCTAA-GGATTGGATA-TGGGGGTT-GCTGGTCTCT--AACGAGATCAGCTCCTCTGAAATGCATTAGCAGAAACCGTTTGACGCT--GAGTGCTAGGCTGTGATAATATCTACAGCTTGGTAGTCGTGTCGGAATAC--AAGTCAA-------------------------------------GGATCGGTTT-GGAGGGTGCTTAACGGCTCCTTCT-----------------------ACTTG-TCCGAAATT-----------------------------------------------GCTT-ACTT-GTATAAGGATTCAGCTTCTAACGGTCCATTGAGTTGGACAATTTATTGAG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 1018 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;